HHsearch alignment for GI: 254780332 and conserved domain: PRK11784

>PRK11784 tRNA 2-selenouridine synthase; Provisional.
Probab=96.01  E-value=0.045  Score=35.27  Aligned_cols=95  Identities=21%  Similarity=0.320  Sum_probs=58.5

Q ss_pred             CCCCCCCHHHHHHH-HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH
Q ss_conf             64432101377655-64167726776213100276999999999985101112333332124797589995852179998
Q gi|254780332|r  200 AGVSTGIQTLDKQM-GGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLA  278 (504)
Q Consensus       200 ~Gi~TG~~~LD~~~-gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~  278 (504)
T Consensus       118 ~~l~GGYKayR~~v~~~l~~-~~~vl~G~TG~GKT~lL~~L~~-------------------~G~~vi--DL----EglA  171 (333)
T PRK11784        118 PLLEGGYKAYRRFVIDTLEE-PLVVLGGMTGSGKTRLLQALAN-------------------AGAQVL--DL----EGLA  171 (333)
T ss_pred             CCCCCCHHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHH-------------------CCCCEE--CH----HHHH
T ss_conf             60376089999999998546-8599867888778999999997-------------------599743--38----9886


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCHHHHH-HHHHHHHHHHHCCEEEECCCC
Q ss_conf             78999987410110001213768899-899999998627807825899
Q gi|254780332|r  279 TRIISEQTEVPSSKIRRGELTRPDYE-KIVACSQVMQKLPLYIDQTGG  325 (504)
Q Consensus       279 ~R~is~~s~I~~~~i~~g~l~~~e~~-~i~~a~~~l~~~~l~I~d~~~  325 (504)
T Consensus       172 ~HRGS~FG~~~~-----~QPsQk~FE~~L~~~l~~~~~~~i~vE~ESr  214 (333)
T PRK11784        172 NHRGSSFGRLGG-----PQPSQKDFENLLAEALLKLDPAPIVVEDESR  214 (333)
T ss_pred             HCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             325642358899-----9987899999999999808998569960100