HHsearch alignment for GI: 254780332 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=96.59 E-value=0.0045 Score=42.86 Aligned_cols=37 Identities=27% Similarity=0.474 Sum_probs=31.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 7267762131002769999999999851011123333321247975899958
Q gi|254780332|r 219 SDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSL 270 (504)
Q Consensus 219 G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSl 270 (504)
T Consensus 101 ~~NlIf~G~pGtGKTHLA~AIg~~a~~---------------~G~sVlF~t~ 137 (248)
T PRK12377 101 CTNFVFSGKPGTGKNHLAAAIGNRLLA---------------KGRSVIVVTV 137 (248)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEEEH
T ss_conf 860899899998788999999999998---------------7996999889