HHsearch alignment for GI: 254780332 and conserved domain: PRK13235

>PRK13235 nifH nitrogenase reductase; Reviewed.
Probab=95.76  E-value=0.17  Score=30.92  Aligned_cols=147  Identities=14%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC---CCC
Q ss_conf             77621310027699999999998510111233333212479758999585217999878999987410110001---213
Q gi|254780332|r  222 IIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRR---GEL  298 (504)
Q Consensus       222 ~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~---g~l  298 (504)
T Consensus         4 iaiyGKGGVGKSTtt~NLaAALA~---------------~GkkVl~IgcDPk~d--sT~~L--~gg~~~~tvld~l~~~~   64 (274)
T PRK13235          4 VAIYGKGGIGKSTTTQNTVAGLAE---------------MGKKVMVVGCDPKAD--STRLL--LGGLQQKTVLDTLREEG   64 (274)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEECCCCCCC--HHHHH--HCCCCCCCHHHHHHHCC
T ss_conf             999799855476789999999997---------------899799989898453--66787--38998997899998628


Q ss_pred             CHHHHHHHHHHHHHHHHCCEEEEC--------CCCCCHHHHHHHHHHH---CCCCCCCEEEECCHHHCCCCCCC------
Q ss_conf             768899899999998627807825--------8998899999988640---22444746776713532566443------
Q gi|254780332|r  299 TRPDYEKIVACSQVMQKLPLYIDQ--------TGGISMSQLATRARRL---KRQRGLDLLIVDYIQLMTTSKKI------  361 (504)
Q Consensus       299 ~~~e~~~i~~a~~~l~~~~l~I~d--------~~~~ti~~I~~~~r~~---~~~~gi~~vvIDYLqli~~~~~~------  361 (504)
T Consensus        65 ~~~---~ledvi~~g~~gi~cveaggp~pg~gcagrgii~~~~~L~~l~~~~~~~~~DyVl~DvLGdvvcggFa~pir~~  141 (274)
T PRK13235         65 EDV---ELEDIIKEGYGNTRCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDVLGDVVCGGFAMPIRDG  141 (274)
T ss_pred             CCC---CHHHHEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf             776---77894431789818986899875667576315258999988177543357768998137853124511551006


Q ss_pred             -C-------CHHHH---HHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             -2-------11378---89999999999998827919997
Q gi|254780332|r  362 -E-------ENRVL---EITGITMALKALAKELNIPIIAL  390 (504)
Q Consensus       362 -~-------~~r~~---~i~~is~~lK~lA~e~~ipvi~l  390 (504)
T Consensus       142 ~A~eV~IVts~E~~AL~aannI~k~i~~~~~~~~~~l~Gi  181 (274)
T PRK13235        142 KAEEIYIVCSGEMMAMYAANNICKGILKYADAGGVRLGGL  181 (274)
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             5878999916836899999999999999974379548899