HHsearch alignment for GI: 254780332 and conserved domain: PRK13635
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.62 E-value=0.0013 Score=46.98 Aligned_cols=174 Identities=17% Similarity=0.261 Sum_probs=89.9
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH---HHHHHHHHHH
Q ss_conf 3776556416772677621310027699999999998510111233333212479758999585217---9998789999
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSS---EQLATRIISE 284 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~---~el~~R~is~ 284 (504)
T Consensus 22 aL~~isl~i~~GE~vaivG~nGsGKSTL~k~l~G-l~~--------------p~~G~I~i~G~~i~~~~~~~lr~~-ig~ 85 (279)
T PRK13635 22 ALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNG-LLL--------------PEAGTITVGGMVLSEETVWDVRKQ-IGM 85 (279)
T ss_pred EEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHC-CCC--------------CCCCEEEECCEECCCCCHHHHHHH-EEE
T ss_conf 5763076887998999999999659999999972-888--------------889649999999985787999743-668
Q ss_pred HHHHC-----C----CCC----CCCCCCHHH-HHHHHHHHHHHHHCCEEEECCC-CCCHHH--HHHHHHHHCCCCCCCEE
Q ss_conf 87410-----1----100----012137688-9989999999862780782589-988999--99988640224447467
Q gi|254780332|r 285 QTEVP-----S----SKI----RRGELTRPD-YEKIVACSQVMQKLPLYIDQTG-GISMSQ--LATRARRLKRQRGLDLL 347 (504)
Q Consensus 285 ~s~I~-----~----~~i----~~g~l~~~e-~~~i~~a~~~l~~~~l~I~d~~-~~ti~~--I~~~~r~~~~~~gi~~v 347 (504)
T Consensus 86 VfQ~P~~~l~~~tV~e~iafgl~~~g~~~~e~~~rv~~~l~~~g-l~~~~~~~p~~LSGGQrQRvaIAraL~--~~P~iL 162 (279)
T PRK13635 86 VFQNPDNQFVGTTVQDDVAFGLENIGVPREEMVERVDQALRQVG-MEDFLNREPHRLSGGQKQRVAIAGVLA--LQPDIL 162 (279)
T ss_pred EECCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC-CHHHHHCCHHHCCHHHHHHHHHHHHHH--CCCCEE
T ss_conf 82185652576268999988998779999999999999998779-978861793439999999999999997--099989
Q ss_pred EECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 76713532566443211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r 348 IVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 348 vIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 163 ilD-----EPTs-~LD~~--~~~~i~~~l~~L~~~~g~TvI~itH----------------dl~---~~~~-aDRiivm~ 214 (279)
T PRK13635 163 ILD-----EATS-MLDPQ--GRREVLETVRQLKEQKGITVLSITH----------------DLD---EAAQ-ADRVIVMN 214 (279)
T ss_pred EEC-----CCCC-CCCHH--HHHHHHHHHHHHHHCCCCEEEEEEE----------------CHH---HHHC-CCEEEEEE
T ss_conf 973-----8745-48989--9999999999999837989999976----------------789---9963-99899998
Q ss_pred C
Q ss_conf 5
Q gi|254780332|r 428 R 428 (504)
Q Consensus 428 R 428 (504)
T Consensus 215 ~ 215 (279)
T PRK13635 215 K 215 (279)
T ss_pred C
T ss_conf 9