HHsearch alignment for GI: 254780332 and conserved domain: PRK13640
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.43 E-value=0.00058 Score=49.64 Aligned_cols=177 Identities=18% Similarity=0.235 Sum_probs=87.9
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHH--HHHHHHH
Q ss_conf 37765564167726776213100276999999999985101112333332124797589995852179998--7899998
Q gi|254780332|r 208 TLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLA--TRIISEQ 285 (504)
Q Consensus 208 ~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~--~R~is~~ 285 (504)
T Consensus 23 aL~~vsl~I~~Ge~vaiiG~nGsGKSTL~~~l~Gll-~P~~-----------~~~G~i~~~g~~i~~~~~~~lr~~vg~V 90 (283)
T PRK13640 23 ALKDVSFSIPRGSWTALIGHNGSGKSTISKLINGLL-LPDD-----------NPKSKITVDGITLTAKTVWDIREKVGIV 90 (283)
T ss_pred EEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCC-CCCC-----------CCEEEEEECCEECCCCCHHHHHHCEEEE
T ss_conf 787718699899999999999987999999996403-7888-----------8617999999999967988996261899
Q ss_pred --------------HHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHCCEEEECCC-CCCHHH--HHHHHHHHCCCCCCCEE
Q ss_conf --------------741011000121376889-989999999862780782589-988999--99988640224447467
Q gi|254780332|r 286 --------------TEVPSSKIRRGELTRPDY-EKIVACSQVMQKLPLYIDQTG-GISMSQ--LATRARRLKRQRGLDLL 347 (504)
Q Consensus 286 --------------s~I~~~~i~~g~l~~~e~-~~i~~a~~~l~~~~l~I~d~~-~~ti~~--I~~~~r~~~~~~gi~~v 347 (504)
T Consensus 91 fQ~P~~q~~~~tV~e~iafg-l~n~~~~~~e~~~~v~~~l~~vgl~~-~~~~~p~~LSGGqkQRvaiA~aLa--~~P~iL 166 (283)
T PRK13640 91 FQNPDNQFVGATVGDDVAFG-LENRGVPRPEMIKIVADVLSDVGMLD-YIDSEPANLSGGQKQRVAIAGILA--VEPQII 166 (283)
T ss_pred EECCCCCCCCCCHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHCCCHH-HHHCCHHHCCHHHHHHHHHHHHHH--CCCCEE
T ss_conf 86887618878299999845-75379999999999999998779977-764792229999999999999997--199999
Q ss_pred EECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE
Q ss_conf 76713532566443211378899999999999988279199977138220168999984010143242233138788972
Q gi|254780332|r 348 IVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVI 427 (504)
Q Consensus 348 vIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~~l~ 427 (504)
T Consensus 167 llD-----EPTs-~LD~--~~~~~i~~~l~~l~~e~g~TvI~itH----------------d~~---~a~-~aDrv~vm~ 218 (283)
T PRK13640 167 ILD-----ESTS-MLDP--AGKEQILKLIRKLMKDNNLTIISITH----------------DID---EAA-GADQVLVLD 218 (283)
T ss_pred EEC-----CCCC-CCCH--HHHHHHHHHHHHHHHCCCCEEEEEEE----------------CHH---HHH-HCCEEEEEE
T ss_conf 976-----8745-4898--99999999999999706989999978----------------878---997-099899999
Q ss_pred C
Q ss_conf 5
Q gi|254780332|r 428 R 428 (504)
Q Consensus 428 R 428 (504)
T Consensus 219 ~ 219 (283)
T PRK13640 219 D 219 (283)
T ss_pred C
T ss_conf 9