HHsearch alignment for GI: 254780332 and conserved domain: PRK13643
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=96.89 E-value=0.016 Score=38.74 Aligned_cols=188 Identities=12% Similarity=0.136 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC---------CCCCEEE-EEECC
Q ss_conf 4321013776556416772677621310027699999999998510111233333212---------4797589-99585
Q gi|254780332|r 202 VSTGIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKT---------INGGIVG-FYSLE 271 (504)
Q Consensus 202 i~TG~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~---------~~g~~Vl-~fSlE 271 (504)
T Consensus 15 ~p~~~~aL~dIsl~I~~Ge~vaiiG~nGsGKSTLl~~l~Gl-l~p~~G~V~~~~~~i~~~~~~~~~~~~~~~vG~VfQ-- 91 (288)
T PRK13643 15 SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGL-LQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQ-- 91 (288)
T ss_pred CCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCC-CCCCCCEEEECCEECCCCCHHHHHHHHHHCEEEEEE--
T ss_conf 98727336633679859989999999994799999999748-888885699999985687735447987751799997--
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHCCEE--EEC-CC-CCCHHHHH--HHHHHHCCCCCC
Q ss_conf 2179998789999874101100012137688998-99999998627807--825-89-98899999--988640224447
Q gi|254780332|r 272 MSSEQLATRIISEQTEVPSSKIRRGELTRPDYEK-IVACSQVMQKLPLY--IDQ-TG-GISMSQLA--TRARRLKRQRGL 344 (504)
Q Consensus 272 Ms~~el~~R~is~~s~I~~~~i~~g~l~~~e~~~-i~~a~~~l~~~~l~--I~d-~~-~~ti~~I~--~~~r~~~~~~gi 344 (504)
T Consensus 92 ~p~~ql~~~tV--~e~vafg-~~n~g~~~~e~~~~v~~~l~~---vgl~d~~~~r~p~~LSGGqkqRvaiA~aLa--~~P 163 (288)
T PRK13643 92 FPESQLFEETV--LKDVAFG-PQNFGIPKEKAEKIAAEKLEM---VGLADEFWEKSPFELSGGQMRRVAIAGILA--MEP 163 (288)
T ss_pred CCCCCCCHHHH--HHHHHHH-HHHCCCCHHHHHHHHHHHHHH---CCCHHHHHHCCCCCCCHHHHHHHHHHHHHH--CCC
T ss_conf 77320243369--9999989-998699989999999999997---599366752797639999999999999997--499
Q ss_pred CEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEE
Q ss_conf 46776713532566443211378899999999999988279199977138220168999984010143242233138788
Q gi|254780332|r 345 DLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVL 424 (504)
Q Consensus 345 ~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~ 424 (504)
T Consensus 164 ~vLlLD-----EPTs~-LDp--~~~~~i~~ll~~l~~-~G~TiI~vtH----------------d---~~~v~~~adrvi 215 (288)
T PRK13643 164 EVLVLD-----EPTAG-LDP--KARIEMMQLFESIHQ-SGQTVVLVTH----------------L---MDDVADYADYVY 215 (288)
T ss_pred CEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHHH-CCCEEEEECC----------------C---HHHHHHHCCEEE
T ss_conf 999995-----88555-899--999999999999995-3999999860----------------8---999999799999
Q ss_pred EEEC
Q ss_conf 9725
Q gi|254780332|r 425 FVIR 428 (504)
Q Consensus 425 ~l~R 428 (504)
T Consensus 216 vl~~ 219 (288)
T PRK13643 216 LLEK 219 (288)
T ss_pred EEEC
T ss_conf 9989