HHsearch alignment for GI: 254780332 and conserved domain: PRK13644
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional.
Probab=97.00 E-value=0.0075 Score=41.15 Aligned_cols=177 Identities=19% Similarity=0.217 Sum_probs=89.5
Q ss_pred CCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH---HHHHHHH
Q ss_conf 1013776556416772677621310027699999999998510111233333212479758999585217---9998789
Q gi|254780332|r 205 GIQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSS---EQLATRI 281 (504)
Q Consensus 205 G~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~---~el~~R~ 281 (504)
T Consensus 14 ~~~aL~~vsl~i~~Ge~vaiiG~nGsGKSTL~~~l~Gll-~--------------P~~G~I~v~G~d~~~~~~~~~~r~~ 78 (274)
T PRK13644 14 GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLL-R--------------PQKGKVLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred CCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCC-C--------------CCCCEEEECCEECCCCHHHHHHHHH
T ss_conf 984663117798489999999999980999999997068-5--------------8887299999987870567999873
Q ss_pred HHHHHHHCCC---------CCC----CCCCCHHHH-HHHHHHHHHHHHCCEEEECCC-CCCHHH--HHHHHHHHCCCCCC
Q ss_conf 9998741011---------000----121376889-989999999862780782589-988999--99988640224447
Q gi|254780332|r 282 ISEQTEVPSS---------KIR----RGELTRPDY-EKIVACSQVMQKLPLYIDQTG-GISMSQ--LATRARRLKRQRGL 344 (504)
Q Consensus 282 is~~s~I~~~---------~i~----~g~l~~~e~-~~i~~a~~~l~~~~l~I~d~~-~~ti~~--I~~~~r~~~~~~gi 344 (504)
T Consensus 79 ig~vfQ~p~~q~~~~tV~e~iafg~~~~~l~~~e~~~~v~~aL~~~g-l~~~~~~~p~~LSGGqkQRvaiA~aLa--~~P 155 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIG-LEKYRHRSPKTLSGGQGQCVALAGILT--MEP 155 (274)
T ss_pred EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC-CHHHHHCCCCCCCHHHHHHHHHHHHHH--HCC
T ss_conf 17996582110361519999962197669999999999999999859-687762891109976999999999998--299
Q ss_pred CEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEE
Q ss_conf 46776713532566443211378899999999999988279199977138220168999984010143242233138788
Q gi|254780332|r 345 DLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVL 424 (504)
Q Consensus 345 ~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~v~ 424 (504)
T Consensus 156 ~iLiLD-----EPTs~-LD~--~~~~~i~~~l~~L~-~~g~TvI~itH----------------dl~---~~-~~aDrvi 206 (274)
T PRK13644 156 ECLIFD-----EVTSM-LDP--DSGIAVLERIKKLH-EKGKTIVYITH----------------NLE---EL-HDADRII 206 (274)
T ss_pred CEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHH-HCCCEEEEEEE----------------CHH---HH-HCCCEEE
T ss_conf 999997-----98667-899--99999999999998-68999999833----------------789---99-7199899
Q ss_pred EEEC
Q ss_conf 9725
Q gi|254780332|r 425 FVIR 428 (504)
Q Consensus 425 ~l~R 428 (504)
T Consensus 207 vl~~ 210 (274)
T PRK13644 207 VMDR 210 (274)
T ss_pred EEEC
T ss_conf 9989