HHsearch alignment for GI: 254780332 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=95.63 E-value=0.16 Score=31.10 Aligned_cols=98 Identities=14% Similarity=0.166 Sum_probs=53.7
Q ss_pred HHHHHHH-HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-CEEEEEECCC--CHHHHHHHHHH
Q ss_conf 3776556-416772677621310027699999999998510111233333212479-7589995852--17999878999
Q gi|254780332|r 208 TLDKQMG-GLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTING-GIVGFYSLEM--SSEQLATRIIS 283 (504)
Q Consensus 208 ~LD~~~g-Gl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g-~~Vl~fSlEM--s~~el~~R~is 283 (504)
T Consensus 32 ~L~~~l~PG~~P~Ni-~iYGkTGtGKT~vt~~v~~~l~~~~~~~---------d~~D~~~~~~NC~~~~T~y~~~~~L~~ 101 (383)
T TIGR02928 32 ALRPILRPGSRPSNI-FIYGKTGTGKTAVTKYVMKELEEAAEDR---------DVRDVSTVYINCQILDTSYQVLVELAN 101 (383)
T ss_pred HHHHHHCCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHHHHHCC---------CCCCEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 988750674898725-8878889878899999999999986226---------997158999778546846999999999
Q ss_pred HH--HHHCCCCCCCCCCCHHHHHHHHHHHH-HHHH
Q ss_conf 98--74101100012137688998999999-9862
Q gi|254780332|r 284 EQ--TEVPSSKIRRGELTRPDYEKIVACSQ-VMQK 315 (504)
Q Consensus 284 ~~--s~I~~~~i~~g~l~~~e~~~i~~a~~-~l~~ 315 (504)
T Consensus 102 ~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~ 136 (383)
T TIGR02928 102 QLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGD 136 (383)
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 85157788889887787899999999998320188