HHsearch alignment for GI: 254780332 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.72 E-value=0.023 Score=37.51 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=28.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 772677621310027699999999998510111233333212479758999585
Q gi|254780332|r 218 RSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE 271 (504)
Q Consensus 218 ~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE 271 (504)
T Consensus 18 ~~~~ill~GppGtGKT~la~~ia~~~~~---------------~~~~~~~~~~~ 56 (151)
T cd00009 18 PPKNLLLYGPPGTGKTTLARAIANELFR---------------PGAPFLYLNAS 56 (151)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCC---------------CCCCEEEEEHH
T ss_conf 9980899899998865999999997121---------------37982785477