HHsearch alignment for GI: 254780332 and conserved domain: cd02037

>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=97.09  E-value=0.0075  Score=41.16  Aligned_cols=151  Identities=21%  Similarity=0.215  Sum_probs=77.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf             67762131002769999999999851011123333321247975899958521799987899998741011000121376
Q gi|254780332|r  221 LIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTR  300 (504)
Q Consensus       221 l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~  300 (504)
T Consensus         2 i~v~s~kggvgkst~~~~la~~l~~---------------~g~~v~~~d~di~gp-------------sip~~~rGp~~~   53 (169)
T cd02037           2 IAVMSGKGGVGKSTVAVNLALALAK---------------LGYKVGLLDADIYGP-------------SIPKMWRGPMKM   53 (169)
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHH---------------CCCCEEEEEEECCCC-------------CCCEEEECHHHH
T ss_conf             8997499988199999999999998---------------799789997137999-------------755012047389


Q ss_pred             HHHHHHHHHHHHH--HHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             8899899999998--62780782589988999999886402244474677671353256644321137889999999999
Q gi|254780332|r  301 PDYEKIVACSQVM--QKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKA  378 (504)
Q Consensus       301 ~e~~~i~~a~~~l--~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~  378 (504)
T Consensus        54 ~~---i~q~l~~~~w~~lDyLIID~PPGtgD~~lt~~~~~~~---d~~IvV------TTP~~------~s~~-Da~r~i~  114 (169)
T cd02037          54 GA---IKQFLTDVDWGELDYLVIDMPPGTGDEHLTLAQSLPI---DGAVIV------TTPQE------VALD-DVRKAID  114 (169)
T ss_pred             HH---HHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCC---CCEEEE------ECCCH------HHHH-HHHHHHH
T ss_conf             99---9999985254667889996899987077879875056---747999------46958------8999-9999999


Q ss_pred             HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHC
Q ss_conf             998827919997713822016899998401014324223313
Q gi|254780332|r  379 LAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDA  420 (504)
Q Consensus       379 lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdA  420 (504)
T Consensus       115 ~~~~~~i~i~GvV-eNMs~~~c~~-c~~~~~ifg~~~~~~la  154 (169)
T cd02037         115 MFKKVNIPILGVV-ENMSYFVCPH-CGKKIYIFGKGGGEKLA  154 (169)
T ss_pred             HHHHCCCCEEEEE-ECCCCCCCCC-CCCEEECCCCCHHHHHH
T ss_conf             9997599707999-8796660799-99735278884499999