HHsearch alignment for GI: 254780332 and conserved domain: cd03234
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=96.56 E-value=0.041 Score=35.53 Aligned_cols=177 Identities=20% Similarity=0.220 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
Q ss_conf 01377655641677267762131002769999999999851011123333321247975899958521799987899998
Q gi|254780332|r 206 IQTLDKQMGGLQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQ 285 (504)
Q Consensus 206 ~~~LD~~~gGl~~G~l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~ 285 (504)
T Consensus 20 ~~vL~~vs~~i~~Ge~~~ilGpnGsGKSTLl~~i~G-~~~~~-----------~~~~G~I~~~g~~~~~~~~~~~-igy- 85 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISG-RVEGG-----------GTTSGQILFNGQPRKPDQFQKC-VAY- 85 (226)
T ss_pred EEEEECCEEEEECCCEEEEECCCCCHHHHHHHHHHC-CCCCC-----------CCCEEEEEECCEECCHHHHHHC-EEE-
T ss_conf 899889778991880999998999609999999967-89789-----------8414599999999987897501-899-
Q ss_pred HHHCCCCCCCCCCC------------------HHHHHHHHHHHHHHHHCCEE--EECC-CCCCHHHH--HHHHHHHCCCC
Q ss_conf 74101100012137------------------68899899999998627807--8258-99889999--99886402244
Q gi|254780332|r 286 TEVPSSKIRRGELT------------------RPDYEKIVACSQVMQKLPLY--IDQT-GGISMSQL--ATRARRLKRQR 342 (504)
Q Consensus 286 s~I~~~~i~~g~l~------------------~~e~~~i~~a~~~l~~~~l~--I~d~-~~~ti~~I--~~~~r~~~~~~ 342 (504)
T Consensus 86 --v~Q~~~l~~~lTv~e~l~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~~~~~~~~~~LSGGqrqRv~iA~aL~--~ 160 (226)
T cd03234 86 --VRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRV-EDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLL--W 160 (226)
T ss_pred --ECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHH--C
T ss_conf --91667567898899999999974676436278999999-999998758976746773328999999999999996--5
Q ss_pred CCCEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCE
Q ss_conf 47467767135325664432113788999999999999882791999771382201689999840101432422331387
Q gi|254780332|r 343 GLDLLIVDYIQLMTTSKKIEENRVLEITGITMALKALAKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADV 422 (504)
Q Consensus 343 gi~~vvIDYLqli~~~~~~~~~r~~~i~~is~~lK~lA~e~~ipvi~lsQLnR~~e~r~~krP~lsDLr~Sg~IEqdAD~ 422 (504)
T Consensus 161 ~P~illLD-----EPTsg-LD~--~~~~~i~~~l~~l~~~~~~vi~~~H~~-------------------~~~~~~~~Dr 213 (226)
T cd03234 161 DPKVLILD-----EPTSG-LDS--FTALNLVSTLSQLARRNRIVILTIHQP-------------------RSDLFRLFDR 213 (226)
T ss_pred CCCEEEEE-----CCCCC-CCH--HHHHHHHHHHHHHHHCCCEEEEEECCC-------------------HHHHHHHCCE
T ss_conf 99989995-----88656-899--999999999999997899999998889-------------------8999997999
Q ss_pred EEEEEC
Q ss_conf 889725
Q gi|254780332|r 423 VLFVIR 428 (504)
Q Consensus 423 v~~l~R 428 (504)
T Consensus 214 v~vl~~ 219 (226)
T cd03234 214 ILLLSS 219 (226)
T ss_pred EEEEEC
T ss_conf 999959