HHsearch alignment for GI: 254780332 and conserved domain: pfam00004
>pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes.
Probab=93.58 E-value=0.33 Score=28.64 Aligned_cols=105 Identities=19% Similarity=0.288 Sum_probs=0.0
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 77621310027699999999998510111233333212479758999585217999878999987410110001213768
Q gi|254780332|r 222 IIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRP 301 (504)
Q Consensus 222 ~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I~~~~i~~g~l~~~ 301 (504)
T Consensus 1 iLl~GppGtGKT~-------------------------------------------~a~~la~~~~~~~~~v~~~~~~~~ 37 (131)
T pfam00004 1 LLLYGPPGTGKTT-------------------------------------------LAKAVAKELGAPFIEISGSELVSK 37 (131)
T ss_pred CEEECCCCCCHHH-------------------------------------------HHHHHHHHHCCCCEECCCCCCCCC
T ss_conf 9878999999999-------------------------------------------999999997898533242012223
Q ss_pred HHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCHHHHH--HHHHHHHHHHH
Q ss_conf 8998999999986278078258998899999988640224447467767135325664432113788--99999999999
Q gi|254780332|r 302 DYEKIVACSQVMQKLPLYIDQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSKKIEENRVLE--ITGITMALKAL 379 (504)
Q Consensus 302 e~~~i~~a~~~l~~~~l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vvIDYLqli~~~~~~~~~r~~~--i~~is~~lK~l 379 (504)
T Consensus 38 ---------------------~~g~~~~~i~~~f~~a~~~~p-~Il~iDe~d~l~~~~~~~~~~~~~~~~~~ll~~ld~~ 95 (131)
T pfam00004 38 ---------------------YVGESEKRLRELFEAAKKLAP-CVIFIDEIDALAGSRGSGGDSESRRVVNQLLTELDGF 95 (131)
T ss_pred ---------------------CCCHHHHHHHHHHHHHHHCCC-CEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf ---------------------345068889999999997499-1898311677751678888875132687899998502
Q ss_pred -HHHHCCCEEEEE
Q ss_conf -988279199977
Q gi|254780332|r 380 -AKELNIPIIALS 391 (504)
Q Consensus 380 -A~e~~ipvi~ls 391 (504)
T Consensus 96 ~~~~~~v~~I~tT 108 (131)
T pfam00004 96 TSSLSKVIVIAAT 108 (131)
T ss_pred CCCCCCEEEEEEC
T ss_conf 2468876999975