HHsearch alignment for GI: 254780332 and conserved domain: pfam00406

Probab=94.05  E-value=0.53  Score=27.08  Aligned_cols=101  Identities=21%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH---CCCCCCCCCCCHH
Q ss_conf             2131002769999999999851011123333321247975899958521799987899998741---0110001213768
Q gi|254780332|r  225 AGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLEMSSEQLATRIISEQTEV---PSSKIRRGELTRP  301 (504)
Q Consensus       225 aarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlEMs~~el~~R~is~~s~I---~~~~i~~g~l~~~  301 (504)
T Consensus         2 ~G~PGsGKgTqa~~La~~~~--------------------~~~is----~GdllR~~~~~~s~~g~~i~~~i~~G~lvpd   57 (186)
T pfam00406         2 LGPPGAGKGTQAERIVQKYG--------------------IVHLS----TGDLLRAEVKSGTELGKEAKEYMDKGELVPD   57 (186)
T ss_pred             CCCCCCCHHHHHHHHHHHHC--------------------CEEEC----HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCH
T ss_conf             18898985999999999859--------------------90676----9999999986288799999999986995430


Q ss_pred             HH--HHHHHHHHHHHHCC-EEEECCCCCCHHHHHHHHHHHCCCCCCCEEE-EC
Q ss_conf             89--98999999986278-0782589988999999886402244474677-67
Q gi|254780332|r  302 DY--EKIVACSQVMQKLP-LYIDQTGGISMSQLATRARRLKRQRGLDLLI-VD  350 (504)
Q Consensus       302 e~--~~i~~a~~~l~~~~-l~I~d~~~~ti~~I~~~~r~~~~~~gi~~vv-ID  350 (504)
T Consensus        58 ~i~~~l~~~~l~~~~~~~g~iLDGfPR-t~~Qa~~l~~~l~~~~~~~~Vi~l~  109 (186)
T pfam00406        58 EVVVGLVKERLEQNDCKNGFLLDGFPR-TVPQAEALEEMLEYGIKLDYVIEFD  109 (186)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEEECCCC-CHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf             999999999970745548668737989-8999999999997499877799997