HHsearch alignment for GI: 254780332 and conserved domain: pfam00448
>pfam00448 SRP54 SRP54-type protein, GTPase domain. This family includes relatives of the G-domain of the SRP54 family of proteins.
Probab=97.51 E-value=0.0057 Score=42.07 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=30.5
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 677621310027699999999998510111233333212479758999585
Q gi|254780332|r 221 LIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTINGGIVGFYSLE 271 (504)
Q Consensus 221 l~Viaarpg~GKTalalniA~~~A~~~~~~~~~~~~~~~~~g~~Vl~fSlE 271 (504)
T Consensus 3 vi~lvGptGvGKTTTiaKLAa~~~~---------------~~~~V~lit~D 38 (196)
T pfam00448 3 VILLVGLQGSGKTTTIAKLAAYLKK---------------QGKKVLLVAAD 38 (196)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH---------------CCCEEEEEECC
T ss_conf 9999899999889999999999997---------------79928999758