HHsearch alignment for GI: 254780332 and conserved domain: pfam05729
>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=94.98 E-value=0.049 Score=34.96 Aligned_cols=26 Identities=35% Similarity=0.535 Sum_probs=23.1
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67762131002769999999999851
Q gi|254780332|r 221 LIIIAGRPGMGKTSLATNIAYNVADA 246 (504)
Q Consensus 221 l~Viaarpg~GKTalalniA~~~A~~ 246 (504)
T Consensus 2 ~i~i~G~aG~GKTtll~kl~~~wa~g 27 (165)
T pfam05729 2 TVILQGEAGSGKTTLLQKLALLWAQG 27 (165)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 89998279898999999999999869