RPSBLAST alignment for GI: 254780332 and conserved domain: COG1066

>gnl|CDD|31265 COG1066, Sms, Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]. Length = 456

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 56/288 (19%), Positives = 109/288 (37%), Gaps = 72/288 (25%)

Query: 202 VSTGIQTLDKQMGG-LQRSDLIIIAGRPGMGKTSLATNIAYNVADAYKAELQTDGSYKTI 260
           +STGI+ LD+ +GG L    +I+I G PG+GK++L   +A  +A   K            
Sbjct: 75  ISTGIEELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRGKV----------- 123

Query: 261 NGGIVGFYSLEMSSEQLATRIISEQTEVPSSKIRRGELTRPDYEKIVACSQVMQKLPLYI 320
                    L +S E+   +I          K+R   L  P     +     ++ +   +
Sbjct: 124 ---------LYVSGEESLQQI----------KLRADRLGLPTNNLYLLAETNLEDIIAEL 164

Query: 321 DQTGGISMSQLATRARRLKRQRGLDLLIVDYIQLMTTSK-KIEENRVLEITGITMALKAL 379
           +                   Q   DL+++D IQ + + +       V ++  +   L  L
Sbjct: 165 E-------------------QEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRL 205

Query: 380 AKELNIPIIALSQLSRQVENRDNKRPQLSDLRESGSIEQDADVVLFVIRDEYY------- 432
           AK  NI I  +  ++        K   ++  R    +E   D VL+   D +        
Sbjct: 206 AKTKNIAIFIVGHVT--------KEGAIAGPR---VLEHMVDTVLYFEGDRHSRYRILRS 254

Query: 433 IRNKE-PTNKDDILAYTKWQEDLKRVKGIADIIIAKQRHGPTGTVTLA 479
           ++N+   TN+  +   T  +  L+ V   + + ++++     G+  + 
Sbjct: 255 VKNRFGATNELGVFEMT--ENGLREVSNPSALFLSERGEQTPGSAVVV 300