HHsearch alignment for GI: 254780333 and conserved domain: COG3616
>COG3616 Predicted amino acid aldolase or racemase [Amino acid transport and metabolism].
Probab=99.69 E-value=3.4e-14 Score=111.60 Aligned_cols=304 Identities=19% Similarity=0.220 Sum_probs=185.9
Q ss_pred CEEEEEEHHHHHHHHHHHHHHC--CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEE
Q ss_conf 5099986889999999998628--99759999932866579899999999879989998559999999983898526730
Q gi|254780333|r 6 FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83 (370)
Q Consensus 6 ~~~leIdl~al~~Ni~~i~~~~--~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl 83 (370)
T Consensus 18 tP~~liD~dr~~~Ni~r~qa~~~~~g~~lrph~KT----~k~~~la~~ql~aGa~git~~tl~eae~~a~aGi~-dIl~a 92 (368)
T COG3616 18 TPAALIDLDRLDGNIDRMQARADDHGVRLRPHVKT----HKCPELARIQLDAGAWGITCATLGEAEVFADAGID-DILLA 92 (368)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC----CCCHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCC-CEEEE
T ss_conf 96431128877636999998605448365012343----35879999998537731576106788998715865-25871
Q ss_pred CCCCHHHHHH-HHHH----H-HHCCCCCHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCCCCHH-HHHHHHHHHHHHHCC
Q ss_conf 6897469888-8754----2-101348998999988887-608877616761266676556988-999999888863100
Q gi|254780333|r 84 YGIHPGQEKI-IFDT----N-LIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLG 155 (370)
Q Consensus 84 ~~~~~~~~~~-~~~~----~-i~~~i~s~~~l~~l~~~~-~~~~~~~vhlkiDTGM~R~G~~~~-e~~~~~~~~~~~~~~ 155 (370)
T Consensus 93 ~p~~~~~~~~~L~~l~~~~~~~~~~iDs~~~~~~l~~~~~~~~~pl~v~iE~D~G~~R~Gv~t~~~~~~La~~~~~~~~l 172 (368)
T COG3616 93 YPLPGRAALAALAELLADPPRISVLIDSVEQLDALAALARDAGKPLRVLIEIDSGLHRSGVRTPEVAEALAAEIAAAPGL 172 (368)
T ss_pred CCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
T ss_conf 58871668999998518998429995788999999999875499746999957888866757868999999765204660
Q ss_pred CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH--HCCCCHHHCCCCHHCC----CCCCCCHHHCCCCCCCCCCCCCCC-
Q ss_conf 012432012433334667889999999999754--3488601116411004----773222020487353067877675-
Q gi|254780333|r 156 QLSLIISHLACADDPSSHVNSVQLERFRTLISH--YKGIEASLASSSGILL----GPNYHFQLTRPGISLYGGTDKINK- 228 (370)
Q Consensus 156 ~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~--~~~~~~h~~nS~~~l~----~p~~~~d~vR~Gi~lYG~~~~~~~- 228 (370)
T Consensus 173 ~~~Gv~~y~gh~~~~~~~~~--~~~~~~-a~~~~~~~g~~~~~vt~ggtp~~~~~~~~~~~~e~r~G~Y~~~D~~~~~~g 249 (368)
T COG3616 173 RLAGVMTYPGHSYGPGSEVA--AAERVH-AAALLGAVGRAAPVLTSGGTPTAELVAGLSSTTELRAGNYVFNDLVQVAFG 249 (368)
T ss_pred EEEEEECCCCCCCCCCCHHH--HHHHHH-HHHHHCCCCCCCCEEECCCCCCHHHHCCCCCCEEECCCCEEEHHHHHHHHC
T ss_conf 78555303663467765333--333556-899740568766345327887322213577513651673342136666626
Q ss_pred -CCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEE
Q ss_conf -5676410012368863267148983466565346776417971233002601023685433444323288699999995
Q gi|254780333|r 229 -SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307 (370)
Q Consensus 229 -~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~ 307 (370)
T Consensus 250 ~~s~~d~Al~v~atvis~p--~~~~aivdaG~k~ls~D~~~~~~~~~~~~g~~~~~~~------------~--------- 306 (368)
T COG3616 250 IPSLSDGALTVAATVISHP--TPGRAIVDAGSKALSRDRPAARTGFGLGGGYEAARVA------------A--------- 306 (368)
T ss_pred CCCCCCCEEEEEEEEEECC--CCCEEECCCCCCCCCCCCCCCCCCEEECCCCHHHCCC------------C---------
T ss_conf 7751013047767999648--8865640578610005677676642440685432046------------3---------
Q ss_pred EEEEECCCCCEEEECCC--CCCCCCCCEEEEECCC
Q ss_conf 07700425647996688--7787888789997888
Q gi|254780333|r 308 PILGKITMDMTMFDITD--SLSIEVGDYIQIFGPD 340 (370)
Q Consensus 308 pivGrv~MD~~~vdvt~--~~~~~~GD~V~l~G~~ 340 (370)
T Consensus 307 ~e~~~ln~ehg~~~~~~~~~~~l~vGd~v~i~PnH 341 (368)
T COG3616 307 PEVMRLNEEHGTLSVQDPPADLLKVGDRVRLRPNH 341 (368)
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCC
T ss_conf 22356130126995367766668887769960796