HHsearch alignment for GI: 254780333 and conserved domain: cd07376
>cd07376 PLPDE_III_DSD_D-TA_like Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase. This family includes eukaryotic D-serine dehydratases (DSD), cryptic DSDs from bacteria, D-threonine aldolases (D-TA), low specificity D-TAs, and similar uncharacterized proteins. DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. Members of this family are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity to AR, it is poss
Probab=99.84 E-value=2.7e-18 Score=138.14 Aligned_cols=292 Identities=17% Similarity=0.158 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHC--CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC-CHHHH
Q ss_conf 9999999998628--99759999932866579899999999879989998559999999983898526730689-74698
Q gi|254780333|r 15 ALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI-HPGQE 91 (370)
Q Consensus 15 al~~Ni~~i~~~~--~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~-~~~~~ 91 (370)
T Consensus 1 Ale~Ni~~m~~~~~~~g~~lRPH~KT----hK~~~i~~~ql~~Ga~gi~~atl~EAe~~~~~G~~-dIl~a~pi~~~~~l 75 (345)
T cd07376 1 ALEANISRMAARARASGVRLRPHVKT----HKSPELAQRQLAAGARGVTVATLAEAETFAEAGVK-DILMAYPLVGPAAI 75 (345)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECH----HCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCC-CEEEECCCCCHHHH
T ss_conf 97899999999999769976677500----04899999998679970999469999999976998-38996688998999
Q ss_pred HHHHH-----HHHHCCCCCHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCCCCHHH--HHHHHHHHHHHHCCCHHHHHCC
Q ss_conf 88875-----42101348998999988887-6088776167612666765569889--9999988886310001243201
Q gi|254780333|r 92 KIIFD-----TNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISH 163 (370)
Q Consensus 92 ~~~~~-----~~i~~~i~s~~~l~~l~~~~-~~~~~~~vhlkiDTGM~R~G~~~~e--~~~~~~~~~~~~~~~i~gi~TH 163 (370)
T Consensus 76 ~rl~~l~~~~~~i~~~VDs~~~~~~l~~~a~~~~~~~~V~ievD~G~~R~Gv~~~~~~~l~l~~~i~~~~~l~l~G~~~y 155 (345)
T cd07376 76 ARLAGLLRQEAEFHVLVDSPEALAALAAFAAAHGVRLRVMLEVDVGGHRSGVRPEEAAALALADAVQASPGLRLAGVMAY 155 (345)
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 99999863498389997089999999999986598278999978899858888877999999999853999189899974
Q ss_pred CCCC-CCCCCH----HHHHHHHHHHHHHHHH-CCCCHHHCCCCHH--CCC--CCCCCHHHCCCCCCCCCCCCC-CCCCCC
Q ss_conf 2433-334667----8899999999997543-4886011164110--047--732220204873530678776-755676
Q gi|254780333|r 164 LACA-DDPSSH----VNSVQLERFRTLISHY-KGIEASLASSSGI--LLG--PNYHFQLTRPGISLYGGTDKI-NKSHPM 232 (370)
Q Consensus 164 fa~a-d~~~~~----~~~~Q~~~F~~~~~~~-~~~~~h~~nS~~~--l~~--p~~~~d~vR~Gi~lYG~~~~~-~~~~~l 232 (370)
T Consensus 156 ~Gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~vs~GgTpt~~~~~~~~~~tEl~~G~yvf~D~~~~~~~~~~~ 235 (345)
T cd07376 156 EGHIYGAGGAREGAQARDQAVAAVRAAAAAAERGLACPTVSGGGTPTYQLTAGDRAVTELRAGSYVFMDTGFDTLGACAQ 235 (345)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCEEECCCEEEECCHHHCCCCCCCC
T ss_conf 71206999989999999999999999999986499988895578887410336887328746348964213201368984
Q ss_pred CCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEE
Q ss_conf 41001236886326714898346656534677641797123300260102368543344432328869999999507700
Q gi|254780333|r 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312 (370)
Q Consensus 233 ~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGr 312 (370)
T Consensus 236 ~~aa~~v~~Vis~-~~~~~~~~vd~G~kals~d~--~~~~~~~~~~~p~-------------------------~~-~~~ 286 (345)
T cd07376 236 RPAAFRVTTVISR-PAPTGRAVLDAGWKASSADT--AFIGGGAVLGRPE-------------------------LR-AVL 286 (345)
T ss_pred CCEEEEEEEEEEE-CCCCCEEEECCCCCCCCCCC--CCCCCCCCCCCCC-------------------------CE-EEE
T ss_conf 3300899866652-28886289886222223313--5678887558977-------------------------02-553
Q ss_pred CCCCCEEEEC----CCCCCCCCCCEEEEECCC
Q ss_conf 4256479966----887787888789997888
Q gi|254780333|r 313 ITMDMTMFDI----TDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 313 v~MD~~~vdv----t~~~~~~~GD~V~l~G~~ 340 (370)
T Consensus 287 ~s~ehg~~~~~~~~~~~~~l~vGd~v~liP~H 318 (345)
T cd07376 287 LSEEHEGRSEPLNTPDLDDLPIGDRVFLVPNH 318 (345)
T ss_pred ECCCCCEEECCCCCCCCCCCCCCCEEEEEECC
T ss_conf 01575304515667777899999999998088