HHsearch alignment for GI: 254780333 and conserved domain: pfam02784
>pfam02784 Orn_Arg_deC_N Pyridoxal-dependent decarboxylase, pyridoxal binding domain. These pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.
Probab=99.07 E-value=2.9e-08 Score=73.22 Aligned_cols=147 Identities=16% Similarity=0.141 Sum_probs=112.4
Q ss_pred EHHHHHHHHHHHHH-HCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCC-EEEECCC-CH
Q ss_conf 68899999999986-289975999993286657989999999987998999855999999998389852-6730689-74
Q gi|254780333|r 12 DLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR-IFVLYGI-HP 88 (370)
Q Consensus 12 dl~al~~Ni~~i~~-~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~-Ilvl~~~-~~ 88 (370)
T Consensus 1 D~~~i~~~~~~~~~~~~p~~~~~YAvKaN~----~~~il~~l~~~G~-g~dv~S~~El~~al~~g~~~~~I~~~g~~k~~ 75 (245)
T pfam02784 1 DLGRIIERAHALWQAFLPRIQPFYAVKANS----DPAVLRLLAELGL-GFDCASKGELERVLAAGVPPERIIFANPCKSR 75 (245)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEEEECC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCHHHEEEECCCCCH
T ss_conf 968999999999998489977998850188----8999999998299-29998999999999869895788981443546
Q ss_pred HHHHHHHHHHH-HCCCCCHHHHHHHHHHHHCCCCCCCEEEEC------------CC-CCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 69888875421-013489989999888876088776167612------------66-67655698899999988886310
Q gi|254780333|r 89 GQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSHPYALQVD------------TG-FNRLGLSLQEALDFTHNSFNKKL 154 (370)
Q Consensus 89 ~~~~~~~~~~i-~~~i~s~~~l~~l~~~~~~~~~~~vhlkiD------------TG-M~R~G~~~~e~~~~~~~~~~~~~ 154 (370)
T Consensus 76 ~~i~~a~~~gv~~i~vDs~~el~~i~~~~~~---~~i~lRvnp~~~~~~~~~~~~g~~sKFGi~~~~~~~~~~~~~~~-~ 151 (245)
T pfam02784 76 SELRYALEHGVVCVTVDNVEELEKLARLAPE---ARLLLRVKPDVDAHAHCYLSTGQDSKFGADLEEAEALLKAAKEL-G 151 (245)
T ss_pred HHHHHHHHHCCCCEEECCHHHHHHHHHHCCC---CCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-C
T ss_conf 8999999827761442799999999985753---77899994067766554444688777689999999999999867-9
Q ss_pred CCHHHHHCCCCCC
Q ss_conf 0012432012433
Q gi|254780333|r 155 GQLSLIISHLACA 167 (370)
Q Consensus 155 ~~i~gi~THfa~a 167 (370)
T Consensus 152 ~~~~GlH~H~GSq 164 (245)
T pfam02784 152 LNVVGVHFHVGSG 164 (245)
T ss_pred CCEEEEEEECCCC
T ss_conf 9754755653657