HHsearch results for GI: 254780333 and protein with PDBid: 2o0t_A
>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, structural genomics, TB structural genomics consortium; HET: LLP; 2.33A {Mycobacterium tuberculosis H37RV} PDB: 1hkv_A* 1hkw_A
Probab=99.48 E-value=3.9e-11 Score=90.38 Aligned_cols=305 Identities=13% Similarity=0.104 Sum_probs=174.9
Q ss_pred EEEEHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC-
Q ss_conf 998688999999999862-899759999932866579899999999879989998559999999983898526730689-
Q gi|254780333|r 9 LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI- 86 (370)
Q Consensus 9 leIdl~al~~Ni~~i~~~-~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~- 86 (370)
-.+|.+.|+.|++.+++. .++.++.--+|||. ...+.+.+.+.|+ +|-|+|..|....+..|+...=.+++++
T Consensus 45 yV~d~~~i~~n~~~l~~af~~~~~i~yAvKaN~----~~~vl~~l~~~G~-G~dvaS~~El~~al~~G~~~~~Ii~~gp~ 119 (467)
T 2o0t_A 45 FVIDEDDFRSRCRETAAAFGSGANVHYAAKAFL----CSEVARWISEEGL-CLDVCTGGELAVALHASFPPERITLHGNN 119 (467)
T ss_dssp EEEEHHHHHHHHHHHHHHTSSGGGBEEEGGGCC----CHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCCGGGEEECCTT
T ss_pred EEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 998899999999999985689987999874288----7999999998199-79998999999999759893329991898
Q ss_pred -CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHH-CCCCCCCEEEECC--------------CCCCCCCCHHH--HHHHHH
Q ss_conf -7469888875421-013489989999888876-0887761676126--------------66765569889--999998
Q gi|254780333|r 87 -HPGQEKIIFDTNL-IPVISSVPQLTFYSKLMS-CGVSHPYALQVDT--------------GFNRLGLSLQE--ALDFTH 147 (370)
Q Consensus 87 -~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~~-~~~~~~vhlkiDT--------------GM~R~G~~~~e--~~~~~~ 147 (370)
.++++..+...++ ..++.|.++++.+.++.+ .+...++.+-++. ..++.|+..++ ....+.
T Consensus 120 k~~~~l~~a~~~gv~~i~iDs~~El~~l~~~~~~~~~~~~v~lrl~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~ 199 (467)
T 2o0t_A 120 KSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVR 199 (467)
T ss_dssp CCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHH
T ss_pred CCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998775043258846789999999987763987413453204766555422346645565576501567899999
Q ss_pred HHHHHHCCCHHHHHCCCCCCCCCCCHHHHH---HHHHHHHHHHHH---CCCCHHHCCCCHHCCCCCC----CCHH-----
Q ss_conf 888631000124320124333346678899---999999997543---4886011164110047732----2202-----
Q gi|254780333|r 148 NSFNKKLGQLSLIISHLACADDPSSHVNSV---QLERFRTLISHY---KGIEASLASSSGILLGPNY----HFQL----- 212 (370)
Q Consensus 148 ~~~~~~~~~i~gi~THfa~ad~~~~~~~~~---Q~~~F~~~~~~~---~~~~~h~~nS~~~l~~p~~----~~d~----- 212 (370)
.+....++++.|+..|..+.....+.+.+. -++.+.+....+ .+.....-|-+|-+..+.. ..+.
T Consensus 200 ~~~~~~~~~l~Glh~H~gs~~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ld~GGG~~~~~~~~~~~~~~~~~~~ 279 (467)
T 2o0t_A 200 RVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA 279 (467)
T ss_dssp HHHHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECCCCBCCCSSTTCCCCCHHHHHH
T ss_pred HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99735698577898863888787088999999999988889986567507563210331786746777788887789999
Q ss_pred --H-----------CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCE
Q ss_conf --0-----------487353067877675567641001236886326714898346656534677641797123300260
Q gi|254780333|r 213 --T-----------RPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279 (370)
Q Consensus 213 --v-----------R~Gi~lYG~~~~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~ 279 (370)
. .++.-++ -+++. .=..++..+-++|..++....... ...+.+++-.|..+-+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~l~---~EPGR-~lv~~ag~llt~V~~~~~~~~~~~----------~~~~~~~vdag~~~~~ 345 (467)
T 2o0t_A 280 KLGTIVSDESTAVGLPTPKLV---VEPGR-AIAGPGTITLYEVGTVKDVDVSAT----------AHRRYVSVDGGMSDNI 345 (467)
T ss_dssp HHHHHHHHHHHHTTCCCCEEE---BCCSH-HHHSTTEEEEEEEEEEEEEECSSS----------CEEEEEEESCCTTTCC
T ss_pred HHHHHHHHHHHHCCCCCCEEE---ECCCE-EEEECCEEEEEEEEEEEEEECCCC----------CCEEEEEECCCCCCCC
T ss_conf 999999987532057675089---86630-786544799999999974202323----------7658999887654566
Q ss_pred ECCCCCCCCCCCCCCC---CCCEEEECCEEEEEEEECCC--CCEEEECCCCC-CCCCCCEEEEECC
Q ss_conf 1023685433444323---28869999999507700425--64799668877-8788878999788
Q gi|254780333|r 280 PLTLSGLDSEHSPSVF---LGGKGFIKGYMVPILGKITM--DMTMFDITDSL-SIEVGDYIQIFGP 339 (370)
Q Consensus 280 pr~ls~~~~~~~~~~~---~~~~vli~G~~~pivGrv~M--D~~~vdvt~~~-~~~~GD~V~l~G~ 339 (370)
+-.+-+. .+..... ..+ .-+.+-|.|..|+ |.+.-|+. .| ++++||.+.+..-
T Consensus 346 ~~~~~~~--~~~~~~~~~~~~~----~~~~~~v~G~tC~~~D~l~~~~~-lP~~l~~GD~l~f~~~ 404 (467)
T 2o0t_A 346 RTALYGA--QYDVRLVSRVSDA----PPVPARLVGKHCESGDIIVRDTW-VPDDIRPGDLVAVAAT 404 (467)
T ss_dssp HHHHHCC--CCCEEECSSCCCS----CEEEEEEECSSSSTTCEEEEEEE-EETTCCTTCEEEESCC
T ss_pred CHHHHCC--CCCEEECCCCCCC----CEEEEEEEECCCCCCCEEEECCC-CCCCCCCCCEEEECCC
T ss_conf 8567187--5634852577889----82699999658799879925656-8888999999998592