HHsearch results for GI: 254780333 and protein with PDBid: 2o0t_A

>2o0t_A Diaminopimelate decarboxylase; PLP binding enzyme, lysine biosynthesis, structural genomics, TB structural genomics consortium; HET: LLP; 2.33A {Mycobacterium tuberculosis H37RV} PDB: 1hkv_A* 1hkw_A
Probab=99.48  E-value=3.9e-11  Score=90.38  Aligned_cols=305  Identities=13%  Similarity=0.104  Sum_probs=174.9

Q ss_pred             EEEEHHHHHHHHHHHHHH-CCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC-
Q ss_conf             998688999999999862-899759999932866579899999999879989998559999999983898526730689-
Q gi|254780333|r    9 LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI-   86 (370)
Q Consensus         9 leIdl~al~~Ni~~i~~~-~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~-   86 (370)
                      -.+|.+.|+.|++.+++. .++.++.--+|||.    ...+.+.+.+.|+ +|-|+|..|....+..|+...=.+++++ 
T Consensus        45 yV~d~~~i~~n~~~l~~af~~~~~i~yAvKaN~----~~~vl~~l~~~G~-G~dvaS~~El~~al~~G~~~~~Ii~~gp~  119 (467)
T 2o0t_A           45 FVIDEDDFRSRCRETAAAFGSGANVHYAAKAFL----CSEVARWISEEGL-CLDVCTGGELAVALHASFPPERITLHGNN  119 (467)
T ss_dssp             EEEEHHHHHHHHHHHHHHTSSGGGBEEEGGGCC----CHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCCGGGEEECCTT
T ss_pred             EEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCC----CHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCCCCEEEEECCC
T ss_conf             998899999999999985689987999874288----7999999998199-79998999999999759893329991898


Q ss_pred             -CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHH-CCCCCCCEEEECC--------------CCCCCCCCHHH--HHHHHH
Q ss_conf             -7469888875421-013489989999888876-0887761676126--------------66765569889--999998
Q gi|254780333|r   87 -HPGQEKIIFDTNL-IPVISSVPQLTFYSKLMS-CGVSHPYALQVDT--------------GFNRLGLSLQE--ALDFTH  147 (370)
Q Consensus        87 -~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~~-~~~~~~vhlkiDT--------------GM~R~G~~~~e--~~~~~~  147 (370)
                       .++++..+...++ ..++.|.++++.+.++.+ .+...++.+-++.              ..++.|+..++  ....+.
T Consensus       120 k~~~~l~~a~~~gv~~i~iDs~~El~~l~~~~~~~~~~~~v~lrl~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~  199 (467)
T 2o0t_A          120 KSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVR  199 (467)
T ss_dssp             CCHHHHHHHHHHTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEEESSCCSSSSEETTTTHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99999998775043258846789999999987763987413453204766555422346645565576501567899999


Q ss_pred             HHHHHHCCCHHHHHCCCCCCCCCCCHHHHH---HHHHHHHHHHHH---CCCCHHHCCCCHHCCCCCC----CCHH-----
Q ss_conf             888631000124320124333346678899---999999997543---4886011164110047732----2202-----
Q gi|254780333|r  148 NSFNKKLGQLSLIISHLACADDPSSHVNSV---QLERFRTLISHY---KGIEASLASSSGILLGPNY----HFQL-----  212 (370)
Q Consensus       148 ~~~~~~~~~i~gi~THfa~ad~~~~~~~~~---Q~~~F~~~~~~~---~~~~~h~~nS~~~l~~p~~----~~d~-----  212 (370)
                      .+....++++.|+..|..+.....+.+.+.   -++.+.+....+   .+.....-|-+|-+..+..    ..+.     
T Consensus       200 ~~~~~~~~~l~Glh~H~gs~~~d~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ld~GGG~~~~~~~~~~~~~~~~~~~  279 (467)
T 2o0t_A          200 RVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAA  279 (467)
T ss_dssp             HHHHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECCCCBCCCSSTTCCCCCHHHHHH
T ss_pred             HHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf             99735698577898863888787088999999999988889986567507563210331786746777788887789999


Q ss_pred             --H-----------CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCE
Q ss_conf             --0-----------487353067877675567641001236886326714898346656534677641797123300260
Q gi|254780333|r  213 --T-----------RPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY  279 (370)
Q Consensus       213 --v-----------R~Gi~lYG~~~~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~  279 (370)
                        .           .++.-++   -+++. .=..++..+-++|..++.......          ...+.+++-.|..+-+
T Consensus       280 ~~~~~~~~~~~~~~~~~~~l~---~EPGR-~lv~~ag~llt~V~~~~~~~~~~~----------~~~~~~~vdag~~~~~  345 (467)
T 2o0t_A          280 KLGTIVSDESTAVGLPTPKLV---VEPGR-AIAGPGTITLYEVGTVKDVDVSAT----------AHRRYVSVDGGMSDNI  345 (467)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEE---BCCSH-HHHSTTEEEEEEEEEEEEEECSSS----------CEEEEEEESCCTTTCC
T ss_pred             HHHHHHHHHHHHCCCCCCEEE---ECCCE-EEEECCEEEEEEEEEEEEEECCCC----------CCEEEEEECCCCCCCC
T ss_conf             999999987532057675089---86630-786544799999999974202323----------7658999887654566


Q ss_pred             ECCCCCCCCCCCCCCC---CCCEEEECCEEEEEEEECCC--CCEEEECCCCC-CCCCCCEEEEECC
Q ss_conf             1023685433444323---28869999999507700425--64799668877-8788878999788
Q gi|254780333|r  280 PLTLSGLDSEHSPSVF---LGGKGFIKGYMVPILGKITM--DMTMFDITDSL-SIEVGDYIQIFGP  339 (370)
Q Consensus       280 pr~ls~~~~~~~~~~~---~~~~vli~G~~~pivGrv~M--D~~~vdvt~~~-~~~~GD~V~l~G~  339 (370)
                      +-.+-+.  .+.....   ..+    .-+.+-|.|..|+  |.+.-|+. .| ++++||.+.+..-
T Consensus       346 ~~~~~~~--~~~~~~~~~~~~~----~~~~~~v~G~tC~~~D~l~~~~~-lP~~l~~GD~l~f~~~  404 (467)
T 2o0t_A          346 RTALYGA--QYDVRLVSRVSDA----PPVPARLVGKHCESGDIIVRDTW-VPDDIRPGDLVAVAAT  404 (467)
T ss_dssp             HHHHHCC--CCCEEECSSCCCS----CEEEEEEECSSSSTTCEEEEEEE-EETTCCTTCEEEESCC
T ss_pred             CHHHHCC--CCCEEECCCCCCC----CEEEEEEEECCCCCCCEEEECCC-CCCCCCCCCEEEECCC
T ss_conf             8567187--5634852577889----82699999658799879925656-8888999999998592