HHsearch results for GI: 254780333 and protein with PDBid: 2p3e_A
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for structural genomics, riken spring-8 center, riken genomic sciences center; 1.99A {Aquifex aeolicus VF5}
Probab=99.74 E-value=6.2e-15 Score=114.96 Aligned_cols=308 Identities=13% Similarity=0.086 Sum_probs=192.0
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 09998688999999999862899759999932866579899999999879989998559999999983898526730689
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI 86 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~ 86 (370)
|--.+|++.|++|++.+++.-++.++.--+|||. ...+.+.+.+.|+ +|-|+|..|....+++|.+..-.+++++
T Consensus 35 P~yv~d~~~i~~~~~~l~~~~p~~~i~YAvKaN~----~~~vl~~l~~~G~-g~dvaS~~El~~al~~G~~~~~Ii~~g~ 109 (420)
T 2p3e_A 35 PLYVYSSNFIKERFEAYRKAFPDALICYAVKANF----NPHLVKLLGELGA-GADIVSGGELYLAKKAGIPPERIVYAGV 109 (420)
T ss_dssp SEEEEEHHHHHHHHHHHHHHSTTSEEEEEGGGCC----CHHHHHHHHHTTC-EEEESSHHHHHHHHHTTCCGGGEEECSS
T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCC----CHHHHHHHHHHCC-CEEEECHHHHHHHHHCCCCHHHEEECCC
T ss_conf 8899999999999999998689988999977689----9999999998099-8289728999999981798567787243
Q ss_pred --CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHH-HCCCCCCCEEEECCC--------------CCCCCCCHHHHHHHHHH
Q ss_conf --7469888875421-01348998999988887-608877616761266--------------67655698899999988
Q gi|254780333|r 87 --HPGQEKIIFDTNL-IPVISSVPQLTFYSKLM-SCGVSHPYALQVDTG--------------FNRLGLSLQEALDFTHN 148 (370)
Q Consensus 87 --~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~-~~~~~~~vhlkiDTG--------------M~R~G~~~~e~~~~~~~ 148 (370)
.++++..+.++++ +.++.+.++++.+.... +.++..++.|-++.+ ..+.|+..++...++..
T Consensus 110 ~k~~~~l~~a~~~gv~~~~~ds~~El~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~skfg~~~~~~~~~~~~ 189 (420)
T 2p3e_A 110 GKTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEY 189 (420)
T ss_dssp CCCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEEC----------------CCSCEEGGGHHHHHHH
T ss_pred CCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 44204589898739337314898999999988873399947999981587866675535777655566440344788999
Q ss_pred HHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCC----CCCCHHHCCCCCCCCC
Q ss_conf 886310001243201243333466788999999999975434--8860111641100477----3222020487353067
Q gi|254780333|r 149 SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGP----NYHFQLTRPGISLYGG 222 (370)
Q Consensus 149 ~~~~~~~~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p----~~~~d~vR~Gi~lYG~ 222 (370)
+...+++++.|+..|+.+-- .+.......+++..++...++ +...+.-|=+|=+-.+ +...++....-...-.
T Consensus 190 ~~~~~~l~~~Glh~H~gS~~-~~~~~~~~ai~~~~~l~~~~~~~g~~l~~idiGGG~~~~~~~~~~~~~~~~~~~~~~~~ 268 (420)
T 2p3e_A 190 ASKLENLEIVGIHCHIGSQI-LDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDL 268 (420)
T ss_dssp HHTCTTEEEEEEECCCCSSB-SSCTHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCBCCCCSTTCCCCCHHHHHHHHTTT
T ss_pred HHHHCCCEEEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 98845960889874476678-88488776788999999999973988564412588786567765441046688999998
Q ss_pred CCCCCCCCC-------CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 877675567-------6410012368863267148983466565346776417971233002601023685433444323
Q gi|254780333|r 223 TDKINKSHP-------MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295 (370)
Q Consensus 223 ~~~~~~~~~-------l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~ 295 (370)
....+..+- ..++..+-++|..+|.-. +.+.+++-.|..+.+.-...+......+...
T Consensus 269 ~~~~~~~l~~EPGR~lva~ag~lv~~V~~~k~~~---------------~~~~~~~d~G~~~~~~~~~~~~~~~~~~~~~ 333 (420)
T 2p3e_A 269 LENVKAKIILEPGRSIMGNAGILITQVQFLKDKG---------------SKHFIIVDAGMNDLIRPSIYNAYHHIIPVET 333 (420)
T ss_dssp C--CCSEEEECCSHHHHGGGEEEEEEEEEEEEET---------------TEEEEEESCCTTTCCHHHHHCCCCCEEESBC
T ss_pred HHCCCCEEEECCCCEEEEEEEEEEEEEEEEEECC---------------CEEEEEEECCCCCCCCHHHHCCCCCEEEECC
T ss_conf 6455978999047467513699999999998379---------------8279999577477556355144311123015
Q ss_pred CCCEEEECCEEEEEEEECC--CCCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 2886999999950770042--56479966887787888789997888
Q gi|254780333|r 296 LGGKGFIKGYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQIFGPD 340 (370)
Q Consensus 296 ~~~~vli~G~~~pivGrv~--MD~~~vdvt~~~~~~~GD~V~l~G~~ 340 (370)
..+ ..+.+.|.|..| +|.+.-++. .|++++||.+++..-.
T Consensus 334 ~~~----~~~~~~i~G~tC~~~D~l~~~~~-lp~l~~GD~l~~~~~G 375 (420)
T 2p3e_A 334 KER----KKVVADIVGPICETGDFLALDRE-IEEVQRGEYLAVLSAG 375 (420)
T ss_dssp CC-------CEEEEECSSSSTTCEEEEEEE-CCCCCTTCEEEECSCT
T ss_pred CCC----CEEEEEEEECCCCCCCEEEECCC-CCCCCCCCEEEECCCC
T ss_conf 788----80589999768689989922663-7889999999997967