HHsearch results for GI: 254780333 and protein with PDBid: 2plj_A
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus CMCP6} PDB: 2plk_A*
Probab=99.75 E-value=1.3e-15 Score=119.34 Aligned_cols=325 Identities=11% Similarity=0.037 Sum_probs=191.0
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 09998688999999999862899759999932866579899999999879989998559999999983898526730689
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI 86 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl~~~ 86 (370)
|--.+|++.|++|++.+++.-++.+++-.+|||. ...+++.+.+.|+ +|-|+|..|....+++|++...++++++
T Consensus 56 P~yV~d~~~l~~n~~~l~~af~~~~i~YAvKAN~----~~~il~~l~~~G~-g~dv~S~~El~~al~aG~~~~~Ii~~gp 130 (419)
T 2plj_A 56 PLLLLDCDVIRQQYRALKNALPNVTLHYALKPLP----HPVVVRTLLAEGA-SFDLATTGEVELVASEGVPADLTIHTHP 130 (419)
T ss_dssp SEEEEEHHHHHHHHHHHHHHSTTEEEEEESTTCC----CHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCCGGGEEECCS
T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCEEEECCC
T ss_conf 8899889999999999998689988999973288----6999999998399-5899799999999975969132898999
Q ss_pred --CHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHC-CCCCCCEEEECCCC----CCCCCCHHHHHHHHHHHHHHHCCCHH
Q ss_conf --74698888754210-134899899998888760-88776167612666----76556988999999888863100012
Q gi|254780333|r 87 --HPGQEKIIFDTNLI-PVISSVPQLTFYSKLMSC-GVSHPYALQVDTGF----NRLGLSLQEALDFTHNSFNKKLGQLS 158 (370)
Q Consensus 87 --~~~~~~~~~~~~i~-~~i~s~~~l~~l~~~~~~-~~~~~vhlkiDTGM----~R~G~~~~e~~~~~~~~~~~~~~~i~ 158 (370)
.++++..++++++. .++.|.++++.+.+..+. +...++.+..++.+ .++|+..++..++.+... ..++++.
T Consensus 131 ~Ks~eel~~Al~~gv~~~~vDs~~el~~l~~~a~~~~~~iri~~~~~~~~~~~~~kfG~~~~~~~~~~~~~~-~~~l~l~ 209 (419)
T 2plj_A 131 IKRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDVELLVRLSFRNSEAFADLSKKFGCSPEQALVIIETAK-EWNIRIK 209 (419)
T ss_dssp SCCHHHHHHHHHHTCCEEEECSHHHHHTTGGGTTTCEEEEEBCC---------CCCSCBCHHHHHHHHHHHH-HTTCEEE
T ss_pred CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCCEE
T ss_conf 887476999997498467403287999998752013420123114653333357877768999999999998-5799577
Q ss_pred HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC---CCCHHHCCCCHHCCCC--C--CCCHH----HCCCCCCCCCCC---
Q ss_conf 43201243333466788999999999975434---8860111641100477--3--22202----048735306787---
Q gi|254780333|r 159 LIISHLACADDPSSHVNSVQLERFRTLISHYK---GIEASLASSSGILLGP--N--YHFQL----TRPGISLYGGTD--- 224 (370)
Q Consensus 159 gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~---~~~~h~~nS~~~l~~p--~--~~~d~----vR~Gi~lYG~~~--- 224 (370)
|+..|+.+... +.+....++++..+++..+. +.....-|-+|-+-.+ + ..++. .+.-...+...+
T Consensus 210 GiH~H~gS~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~idiGGG~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 288 (419)
T 2plj_A 210 GLSFHVGSQTT-NPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPETVHVL 288 (419)
T ss_dssp EEECCCCTTCC-CTHHHHHHHHHHHHHHHHHHHTTCCCCCEEECCCCCCCCSSSCCCCHHHHHHHHHHHHTTSCTTCEEE
T ss_pred EEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 88886467767-84125779999998764200102456425731798763565567898999998899876404674421
Q ss_pred -CCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf -7675567641001236886326714898346656534677641797123300260102368543344432328869999
Q gi|254780333|r 225 -KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303 (370)
Q Consensus 225 -~~~~~~~l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~ 303 (370)
+++..+ ..++..+-++|+.+|..... +.+++--|-.+-+...+.+............++
T Consensus 289 ~EPGR~l-va~ag~lvt~V~~~k~~~~~---------------~~~~vd~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 348 (419)
T 2plj_A 289 AEPGRFI-CAPAVTSVASVMGQAEREGQ---------------IWYYLDDGIYGSFSGLMFDDARYPLTTIKQGGE---- 348 (419)
T ss_dssp ECCCHHH-HGGGEEEEEEEEEEEEETTE---------------EEEEESCCTTTGGGHHHHSCCCCCEEESCCSSC----
T ss_pred CCCHHHH-HHCCEEEEEEEEEEEECCCC---------------EEEEECCCCCCCCCHHHCCCCCCCEECCCCCCC----
T ss_conf 3772651-40243689999999963883---------------478855751245673441366464463478886----
Q ss_pred CEEEEEEEECC--CCCEEEECCCCCCCCCCCEEEEECCC-CCHHHHHHHHCC--CCEEEECC
Q ss_conf 99950770042--56479966887787888789997888-899899998179--46042154
Q gi|254780333|r 304 GYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGT--TNYDLLVR 360 (370)
Q Consensus 304 G~~~pivGrv~--MD~~~vdvt~~~~~~~GD~V~l~G~~-i~~~~~A~~~gt--i~yEil~~ 360 (370)
-..+-|+|.+| +|.++-|+. .|++++||.+.+..-. -+.. ++...+. -|.|++..
T Consensus 349 ~~~~~v~G~~C~s~D~l~~~~~-LP~l~~GD~l~~~~~GAY~~s-~~s~fN~~p~p~~v~v~ 408 (419)
T 2plj_A 349 LIPSVLSGPTCDSVDVIAENIL-LPKLNNGDLVIGRTMGAYTSA-TATDFNFFKRAQTIALN 408 (419)
T ss_dssp EEEEEEECSSSCTTCEEEEEEE-EECCCTTCEEEESSCSSSSGG-GCBCGGGCCCCEEEEEC
T ss_pred EEEEEEECCCCCCCCEECCCCC-CCCCCCCCEEEECCCCHHHHH-HHCCCCCCCCCCEEEEE
T ss_conf 4159998379788688896628-888999999998896633475-62768899988489996