HHsearch results for GI: 254780333 and protein with PDBid: 2vd8_A

Probab=100.00  E-value=0  Score=773.22  Aligned_cols=353  Identities=24%  Similarity=0.368  Sum_probs=329.5

Q ss_pred             CCCCEEEEEEHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEE
Q ss_conf             8885099986889999999998628-997599999328665798999999998799899985599999999838985267
Q gi|254780333|r    3 SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF   81 (370)
Q Consensus         3 ~~~~~~leIdl~al~~Ni~~i~~~~-~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Il   81 (370)
                      -+|.+|+|||++||+||++.+|++. +++++||||||||||||+.+|++.+.++||++|||++++||++||++|++.|||
T Consensus         8 ~~r~t~~EIdl~al~~N~~~i~~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gi~~faVa~~~EA~~LR~~gi~~~Il   87 (391)
T 2vd8_A            8 FYRDTWVEVDLDAIYNNVTHIXEFIPSDVEIFAVVKGNAYGHDYVPVAXIALEAGATRLAVAFLDEALVLRRAGITAPIL   87 (391)
T ss_dssp             CCSSCEEEEEHHHHHHHHHHHHHHSCTTCEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHHTTCCSCEE
T ss_pred             CCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEE
T ss_conf             88988999859999999999997479998799999150264788999999998698999991699999999719999779


Q ss_pred             EECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH-HHHHHHHHHHHHHCCCHHHH
Q ss_conf             30689746988887542101348998999988887608877616761266676556988-99999988886310001243
Q gi|254780333|r   82 VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLI  160 (370)
Q Consensus        82 vl~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~-e~~~~~~~~~~~~~~~i~gi  160 (370)
                      +|+++.+++++.+.++++++++++.+++..+.++.+.+++.++|||+||||||+||.++ |+.++++.+..+++++++|+
T Consensus        88 vl~~~~~~~~~~~~~~~~~~~i~s~~~l~~~~~~~~~~~~~~vhlkiDTGM~RlG~~~~~e~~~~~~~i~~~~~l~i~Gi  167 (391)
T 2vd8_A           88 VLGPSPPRDINVAAENDVALTVFQXEWVDEAIXLWDGSSTMXYHINFDSGMGRIGIRERXELXGFLXSLEGAPFLELEGV  167 (391)
T ss_dssp             ECSCCCGGGHHHHHHTTEEEECCCHHHHHHHHHHCCSSCCEEEEEEBCSSCCSSSBCCHHHHHHHHHHHTTCTTEEEEEE
T ss_pred             EEECCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             97488825655654205320340599999999986046864899996379886788741468999999972899650367


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-----CCCHHHCCCCHHCCCCCCCCHHHCCCCCCCCCCCCCC----CCCC
Q ss_conf             201243333466788999999999975434-----8860111641100477322202048735306787767----5567
Q gi|254780333|r  161 ISHLACADDPSSHVNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHP  231 (370)
Q Consensus       161 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~-----~~~~h~~nS~~~l~~p~~~~d~vR~Gi~lYG~~~~~~----~~~~  231 (370)
                      ||||++||+++.+++..|+++|.++++.++     +...|++||+|++++|+.++||||||++|||++|...    .+.+
T Consensus       168 ~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~~~~~~~~~~h~anS~a~l~~~~~~~d~VR~Gi~lYG~~p~~~~~~~~~~~  247 (391)
T 2vd8_A          168 YTHFATADEVETSYFDXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRPFLPFX  247 (391)
T ss_dssp             ECCCSSTTSSSCHHHHHHHHHHHHHHHHHHHTTCCCCSEECCCHHHHTTCTTCCTTEEEESTTTTTCCSCTTTGGGCSSC
T ss_pred             EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCCCCCCEECCCCEECCCCCCCCCCCCCCC
T ss_conf             61227677654056789999999999999862898320552276766467523577340682014777763324455534


Q ss_pred             CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEE
Q ss_conf             64100123688632671489834665653467764179712330026010236854334443232886999999950770
Q gi|254780333|r  232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILG  311 (370)
Q Consensus       232 l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivG  311 (370)
                      |||+|+|+|+|++||++++|++||||++|++++|++|||||+||||||||.+||            ++|+|+|++|||+|
T Consensus       248 Lkpv~~l~s~v~~i~~~~~G~~VgYg~~~~a~~~~~iavv~iGYaDG~~r~~~~------------~~v~i~G~~~pivG  315 (391)
T 2vd8_A          248 LEPALSLHTXVAHIKQVIXGDGISYNVTYRTXTEEWIATVAIGYADGWLRRLQG------------FEVLVNGXRVPIVG  315 (391)
T ss_dssp             CCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCCGGGTT------------CEEEETTEEEEEES
T ss_pred             CCEEEEEEEECCEEEECCCCCCCCCCCEEECCCCEEEEEECEEECCCCCCCCCC------------CEEEECCEECCEEE
T ss_conf             322166541001069846999778676275136648988441806862304679------------88999998874745


Q ss_pred             ECCCCCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCC
Q ss_conf             04256479966887787888789997888----89989999817946042154888736445
Q gi|254780333|r  312 KITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY  369 (370)
Q Consensus       312 rv~MD~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY  369 (370)
                      ||||||+|||+|+  ++++||+|+|||++    ++++++|+++|||+||++|+|++|+||+|
T Consensus       316 ri~MD~~~VDv~~--~v~~GD~v~l~G~~~~~~i~~~~~a~~~gti~yEil~~l~~Rv~R~y  375 (391)
T 2vd8_A          316 RVTMDQFMIHLPC--EVPLGTXVTLIGRQGDEYISATEVAEYSGTINYEIITTISFRVPRIF  375 (391)
T ss_dssp             CCCSSCEEEEESS--CCCTTCEEEEEEEETTEEECHHHHHHHTTSCHHHHHHTSCTTSCEEE
T ss_pred             EECCCEEEEECCC--CCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCEEE
T ss_conf             7546437998999--99999989997799987889999999878961368608788887599