HHsearch results for GI: 254780333 and protein with PDBid: 3co8_A
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, NYSGXRC, PLP, TIM barrel, structural genomics; HET: PLP; 1.70A {Oenococcus oeni psu-1}
Probab=100.00 E-value=0 Score=744.03 Aligned_cols=352 Identities=23% Similarity=0.323 Sum_probs=319.5
Q ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEEE
Q ss_conf 88509998688999999999862899759999932866579899999999879989998559999999983898526730
Q gi|254780333|r 4 NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83 (370)
Q Consensus 4 ~~~~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~Ilvl 83 (370)
+|.+|+|||++||++|++.+|++.+++++||||||||||||+.+||+++.++||++||||+++||++||++|++.|||+|
T Consensus 7 ~r~t~leIdl~al~~N~~~ir~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~gi~~~Ilvl 86 (380)
T 3co8_A 7 HRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAGIDDFILIL 86 (380)
T ss_dssp TSSCEEEECHHHHHHHHHHHHHHHCCSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEESSHHHHHHHHHTTCCCCEEEC
T ss_pred CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 79879998399999999999855799849999974346478999999999869799999199999999973999838997
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHH-HHHHHHHHHHH-HHCCCHHHHH
Q ss_conf 689746988887542101348998999988887608877616761266676556988-99999988886-3100012432
Q gi|254780333|r 84 YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFN-KKLGQLSLII 161 (370)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTGM~R~G~~~~-e~~~~~~~~~~-~~~~~i~gi~ 161 (370)
+++.+++++.+.++++++++++.++++.+.+..+ +++.+|||||||||||+||.++ +..+++..+.. .+++.++|+|
T Consensus 87 ~~~~~~~~~~~~~~~l~~~i~s~~~l~~l~~~~~-~~~~~VhLkiDTGM~RlG~~~~~~~~~~~~~l~~~~~~l~~~Gi~ 165 (380)
T 3co8_A 87 GPIDVKYAPIASKYHFLTTVSSLDWLKSADKILG-KEKLSVNLAVDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIF 165 (380)
T ss_dssp SCCCGGGHHHHHHTTCEEEECCHHHHHHHHHHCT-TCCEEEEEEBCSSSCSSSBCSHHHHHHHHHHHHHCTTTEEEEEEE
T ss_pred ECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC-CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 2542123368887253100024999999999734-688438999826898677773467899999976411354400266
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHC-CCCHHHCCCCHHCCCCC---CCCHHHCCCCCCCCCCCCCC---CCCCCCC
Q ss_conf 01243333466788999999999975434-88601116411004773---22202048735306787767---5567641
Q gi|254780333|r 162 SHLACADDPSSHVNSVQLERFRTLISHYK-GIEASLASSSGILLGPN---YHFQLTRPGISLYGGTDKIN---KSHPMQT 234 (370)
Q Consensus 162 THfa~ad~~~~~~~~~Q~~~F~~~~~~~~-~~~~h~~nS~~~l~~p~---~~~d~vR~Gi~lYG~~~~~~---~~~~l~p 234 (370)
|||++||+++.+++..|+++|.++++.+. +...|++||++++.++. .++||||||++|||++|... ...+|||
T Consensus 166 SHfa~ad~~~~~~~~~q~~~f~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~d~vR~Gi~lYG~~p~~~~~~~~~~lkp 245 (380)
T 3co8_A 166 THFASSDNPDDHYFQRQKNRWYELIDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKP 245 (380)
T ss_dssp CCCC---------CHHHHHHHHHHHTTSCCCSEEECBCHHHHHHCGGGCTTSCSEEEESTTTTTCCTTTTSSSCGGGSCC
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 20236677764788999999999997435753145533165635811156432234677222456787444451003773
Q ss_pred EEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECC
Q ss_conf 00123688632671489834665653467764179712330026010236854334443232886999999950770042
Q gi|254780333|r 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314 (370)
Q Consensus 235 v~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~~~vli~G~~~pivGrv~ 314 (370)
+|+|+|+|+++|++|+|++||||++|++++|++|||||+||||||||.+|| ++|+|+|++|||+||||
T Consensus 246 v~~l~a~i~~ik~v~~G~~VgYg~~~~~~~~~~iavv~iGYaDG~~r~~~~------------~~v~i~G~~~pivGris 313 (380)
T 3co8_A 246 VFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQD------------FQLLIDGQKCRQVGQIA 313 (380)
T ss_dssp CEEEEEECSEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCCGGGTT------------CEEEETTEEEEEESCCC
T ss_pred CEEEEEECCCCEEECCCCCCCCCCCEECCCCEEEEEEEEECCCCCCCCCCC------------CEEEECCEEEEECCEEC
T ss_conf 189975211314648998666666310378728999801613551520479------------87999999902715733
Q ss_pred CCCEEEECCCCCCCCCCCEEEEECCC----CCHHHHHHHHCCCCEEEECCCCCCCCCCCC
Q ss_conf 56479966887787888789997888----899899998179460421548887364459
Q gi|254780333|r 315 MDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370 (370)
Q Consensus 315 MD~~~vdvt~~~~~~~GD~V~l~G~~----i~~~~~A~~~gti~yEil~~i~~RvpRiY~ 370 (370)
|||+|||||+ ++++||+|+|||++ +|++++|+++|||+||++|+|++|+||+|-
T Consensus 314 MD~~~vdv~~--~~~vGD~V~l~G~~~~~~~~~~~~a~~~~ti~yEil~~l~~Rv~R~yv 371 (380)
T 3co8_A 314 MDQMMVALPH--EYPIGTEVTLIGKSGKYENTLYDLHKHSGVPPWKITVAFSDRLKRMVV 371 (380)
T ss_dssp SSCEEEEESS--CCCTTCEEEEEEEETTEEECHHHHHHHHSCCHHHHHHTCCTTSEEEEC
T ss_pred CCEEEEECCC--CCCCCCEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCEEEE
T ss_conf 4606998999--999999999984899887899999998799565786277888887998