HHsearch results for GI: 254780333 and protein with PDBid: 7odc_A
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyamines, parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=99.63 E-value=8.3e-13 Score=101.23 Aligned_cols=318 Identities=14% Similarity=0.094 Sum_probs=190.5
Q ss_pred EEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCC-EEEECC
Q ss_conf 0999868899999999986289975999993286657989999999987998999855999999998389852-673068
Q gi|254780333|r 7 LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR-IFVLYG 85 (370)
Q Consensus 7 ~~leIdl~al~~Ni~~i~~~~~~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~lR~~g~~~~-Ilvl~~ 85 (370)
+=-.+|++.|++|++.+++.-|+.++.--||||. ...+.+.+.+.|+ +|-|+|..|-...+.+|++.. |+.-++
T Consensus 39 pfyv~d~~~i~~~~~~~~~~~P~v~~~YAvKaN~----~~~il~~l~~~G~-g~dvaS~~El~~al~~G~~~~~Iv~~gp 113 (424)
T 7odc_A 39 AFYVADLGDILKKHLRWLKALPRVTPFYAVKCND----SRAIVSTLAAIGT-GFDCASKTEIQLVQGLGVPAERVIYANP 113 (424)
T ss_dssp CEEEEEHHHHHHHHHHHHHHCTTEEEEEEGGGCC----CHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCCGGGEEECCS
T ss_pred CEEEEEHHHHHHHHHHHHHHCCCCEEEEEEEECC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCEEEECCC
T ss_conf 7899589999999999998689987998851089----8999999998499-2999799999999986979040999799
Q ss_pred C-CHHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHCCCCCCCEEEECCC--------CCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 9-7469888875421-01348998999988887608877616761266--------676556988999999888863100
Q gi|254780333|r 86 I-HPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSHPYALQVDTG--------FNRLGLSLQEALDFTHNSFNKKLG 155 (370)
Q Consensus 86 ~-~~~~~~~~~~~~i-~~~i~s~~~l~~l~~~~~~~~~~~vhlkiDTG--------M~R~G~~~~e~~~~~~~~~~~~~~ 155 (370)
. .++++..+.+.++ ..++.+.++|..+.+. +...++.+-+.+. .+++|+..+++.++++... ..++
T Consensus 114 ~K~~~~i~~A~~~gv~~i~~ds~~EL~~l~~~---~~~~~v~~Ri~~~~~~~~~~~~skFG~~~~~~~~~~~~~~-~~~l 189 (424)
T 7odc_A 114 CKQVSQIKYAASNGVQMMTFDSEIELMKVARA---HPKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERAK-ELNI 189 (424)
T ss_dssp SCCHHHHHHHHHTTCCEEEECSHHHHHHHHHH---CTTCEEEEEBCC-----------CCCBCHHHHHHHHHHHH-HTTC
T ss_pred CCCHHHHHHHHHCCCCEEEECCHHHHHHHHHH---CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCC
T ss_conf 99999999999859957887899999999985---5357752365148754556766778857899999999876-4597
Q ss_pred CHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCHHHCCCCHHCCCC---CCCCH----HHCCCCCCCCCCCCC
Q ss_conf 01243201243333466788999999999975434--8860111641100477---32220----204873530678776
Q gi|254780333|r 156 QLSLIISHLACADDPSSHVNSVQLERFRTLISHYK--GIEASLASSSGILLGP---NYHFQ----LTRPGISLYGGTDKI 226 (370)
Q Consensus 156 ~i~gi~THfa~ad~~~~~~~~~Q~~~F~~~~~~~~--~~~~h~~nS~~~l~~p---~~~~d----~vR~Gi~lYG~~~~~ 226 (370)
++.|+-.|..+.-...+.+. ..++...++.+.++ +.....-|-+|=+-.+ +..++ .++.-+.-|-.. ..
T Consensus 190 ~~~Glh~HvgS~~~d~~~~~-~~~~~~~~~~~~~~~~g~~~~~ldiGGGf~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~ 267 (424)
T 7odc_A 190 DVIGVSFHVGSGCTDPDTFV-QAVSDARCVFDMATEVGFSMHLLDIGGGFPGSEDTKLKFEEITSVINPALDKYFPS-DS 267 (424)
T ss_dssp EEEEEECCCCSSCCCTHHHH-HHHHHHHHHHHHHHHHTCCCCEEECCCCCCCSSSSSSCHHHHHHHHHHHHHHHSCG-GG
T ss_pred CEEEEEEECCCCCCCHHHHH-HHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CC
T ss_conf 28899997288877417799-88888889999999719873067736876776666410577888899999987330-68
Q ss_pred CCCCC-------CCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCC-C
Q ss_conf 75567-------641001236886326714898346656534677641797123300260102368543344432328-8
Q gi|254780333|r 227 NKSHP-------MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG-G 298 (370)
Q Consensus 227 ~~~~~-------l~pv~~l~s~i~~ir~l~~G~~VgYg~~~~~~~~~~iavipiGYaDG~pr~ls~~~~~~~~~~~~~-~ 298 (370)
+..+- ..++..+-++|+.+|..... ..+..........+....+.-|..+.+...+-+ ..+.+..... .
T Consensus 268 ~~~li~EPGR~lva~ag~lvt~V~~~K~~~~~-~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~l~~--~~~~~~~~~~~~ 344 (424)
T 7odc_A 268 GVRIIAEPGRYYVASAFTLAVNIIAKKTVWKE-QPGSDDEDESNEQTFMYYVNDGVYGSFNCILYD--HAHVKALLQKRP 344 (424)
T ss_dssp TCEEEECCSHHHHGGGEEEEEEEEEEEEEC--------------CCEEEEEESCCTTTTTHHHHHS--CCCCCCEESSCC
T ss_pred CCEEEECCCHHHHHCCCEEEEEEEEEEEECCC-CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHC--CCCCEEEECCCC
T ss_conf 96499779723011160699999999983253-332134434456358999866546650345642--455036544688
Q ss_pred EEEECCEEEEEEEECC--CCCEEEECCCCCCCCCCCEEEEECC
Q ss_conf 6999999950770042--5647996688778788878999788
Q gi|254780333|r 299 KGFIKGYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQIFGP 339 (370)
Q Consensus 299 ~vli~G~~~pivGrv~--MD~~~vdvt~~~~~~~GD~V~l~G~ 339 (370)
..--.-..+-|.|..| +|.+.-|+. .|++++||.+.+..-
T Consensus 345 ~~~~~~~~~~i~Gp~C~~~D~l~~~~~-LP~l~~GD~l~~~~~ 386 (424)
T 7odc_A 345 KPDEKYYSSSIWGPTCDGLDRIVERCN-LPEMHVGDWMLFENM 386 (424)
T ss_dssp CTTCCEEEEEEECSSSCTTCEEEEEEE-EECCCTTCEEEECSC
T ss_pred CCCCCEEEEEEEECCCCCCCEECCCCC-CCCCCCCCEEEECCC
T ss_conf 887877789999758588878864546-789999999998498