BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780333|ref|YP_003064746.1| alanine racemase [Candidatus
Liberibacter asiaticus str. psy62]
         (370 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780333|ref|YP_003064746.1| alanine racemase [Candidatus Liberibacter asiaticus str. psy62]
 gi|254040010|gb|ACT56806.1| alanine racemase [Candidatus Liberibacter asiaticus str. psy62]
          Length = 370

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 370/370 (100%), Positives = 370/370 (100%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF
Sbjct: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV
Sbjct: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE
Sbjct: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA
Sbjct: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG
Sbjct: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR
Sbjct: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360

Query: 361 IGTRYAKFYT 370
           IGTRYAKFYT
Sbjct: 361 IGTRYAKFYT 370


>gi|83590990|ref|YP_430999.1| alanine racemase [Moorella thermoacetica ATCC 39073]
 gi|83573904|gb|ABC20456.1| alanine racemase [Moorella thermoacetica ATCC 39073]
          Length = 373

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 104/380 (27%), Positives = 165/380 (43%), Gaps = 25/380 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +  +  +IDL A+  N  ++   L+      A+VK NAYG G   +A      GV    V
Sbjct: 2   SRPVWAEIDLEAVARNVRAIKKILAPQTEIMAIVKANAYGHGAGPVARTALANGVSWLGV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            ++ E + LR     A + +L    P     + + ++   + SV Q    +   +  G  
Sbjct: 62  ATLGEALDLRREGITAPLLILGYTPPEDAGRVVEADISQTVFSVDQARALNAAAAAVGTR 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG  RLG   +EA+       +     L  I +H A +D         QL  
Sbjct: 122 ARLHLKIDTGMGRLGFLPREAVTAARAIADLPHVTLEGIFTHFAASDAADKTYTQRQLGL 181

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F+ +I+              A+S  I+  P  HF L R GI LYG         K   + 
Sbjct: 182 FQQVIAELEKQGITFPWRHAANSGAIIDLPGTHFNLVRAGIILYGHYPSPEVQRKRLALT 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T + R++L+++  AG  +SYG   +    + IA   +GYADGY   LS         
Sbjct: 242 PVMTLKTRVVLVKEVPAGSYISYGCTYRTPGPARIATLPVGYADGYSRLLSNR------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  ++G   PI+G+I MD  M D+T    + VGD + +FG      + +++VA  
Sbjct: 295 ----AEVLVRGRRAPIVGRICMDQCMIDVTAIPEVRVGDEVVLFGRQGGQTLTVEEVAAW 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY++L  I  R  + Y
Sbjct: 351 MGTINYEILCLISKRVPRVY 370


>gi|323703375|ref|ZP_08115024.1| alanine racemase [Desulfotomaculum nigrificans DSM 574]
 gi|323531644|gb|EGB21534.1| alanine racemase [Desulfotomaculum nigrificans DSM 574]
          Length = 372

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 166/380 (43%), Gaps = 25/380 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            E +  +IDL A+++N   +  L   +    AVVK N YG G   +A A  +AG     V
Sbjct: 2   QEPIWAEIDLGAIRHNIKEVRRLVGPDREIMAVVKANGYGHGAVPVARAALSAGATRLAV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             + E + LR       I VL  I P Q       ++   +         S++    G  
Sbjct: 62  ARLNEAMVLRQAGINVPILVLGFIPPEQLAAALTNHITLTLYRTDLAEEISRVAQKLGQP 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+VDTG  RLG   ++ ++           +L  I +H A AD+        QL+R
Sbjct: 122 AVIHLKVDTGMGRLGFIPEQGIEEVKRVSQLAGLKLEGIYTHFAAADETDKSYTRWQLDR 181

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---Q 233
           F + I               A+S+ I+  P  +  + RPGI +YG       +      +
Sbjct: 182 FLSFISALEEQGVTFALRHCANSAAIIDHPEAYLDMVRPGIIIYGLYPSEEVNKSRVDLR 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  + R+  ++    G  +SYG    + R+++I    +GYADGYP  LS         
Sbjct: 242 PAMALKTRVAHLKTVKPGTKISYGCTYTVPRETVIGSLPLGYADGYPRLLSSR------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G+  I+G   PI+G++ MD +M D+     ++VGD + IFG D    + +++VA  
Sbjct: 295 ----GQVIIRGQRAPIVGRVCMDQSMVDVGHIPGVKVGDEVLIFGRDGADYLPVEEVAAW 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++  +G R  + Y
Sbjct: 351 LGTINYEMVCLVGARVPRIY 370


>gi|220931017|ref|YP_002507925.1| alanine racemase [Halothermothrix orenii H 168]
 gi|254802366|sp|B8D0W1|ALR_HALOH RecName: Full=Alanine racemase
 gi|219992327|gb|ACL68930.1| alanine racemase [Halothermothrix orenii H 168]
          Length = 379

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 105/384 (27%), Positives = 179/384 (46%), Gaps = 26/384 (6%)

Query: 1   MHSN--EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+         +IDL+ L+ N++ +  + G N +  +VVK +AYG G   +A  L  AG 
Sbjct: 1   MNKRITRPTWAEIDLSCLQFNFNQVKEILGSNVKIMSVVKADAYGHGVIPVAKTLVEAGT 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LM 116
           Q   V   EEGV+LR       I VL  + P Q +++F  +LIP +         ++   
Sbjct: 61  QRLAVAIPEEGVELREAGLSVPIQVLGEVLPSQYELLFKYDLIPTVGREETALSLNRLAA 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              V     ++VDTG  R+G+  +EA+ F     +    ++  +++H A AD+       
Sbjct: 121 KYNVVKKVHIKVDTGMGRIGVRPREAVGFVKKVNSLSNIKIEGLMTHFASADERDKSYTY 180

Query: 177 VQLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINK--S 229
            Q ++F+ ++     +   +      +S+ I+    +   + RPGI LYG     +   +
Sbjct: 181 EQWDKFKQVLDGLNKLRIDIPIKHSSNSAAIIDFKKFGLDMVRPGIMLYGLKPSRDLINN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T + RI+ +++   G  +SYG      R S IA   +GYADGYP  LS     
Sbjct: 241 IDLKPVLTWKTRIVYLKEVPPGTGISYGTTYVTNRKSKIATLPVGYADGYPRILSNQ--- 297

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G+  ++G   PI G++ MD  M D+T+   + VGD + + G      I   D
Sbjct: 298 --------GQVLVRGRKAPIRGRVCMDQIMIDVTEIPDVRVGDEVVLIGEQGTQKISATD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A  + T NY+++  I  R  + Y
Sbjct: 350 IAEKADTINYEIVCGISQRVPREY 373


>gi|255659976|ref|ZP_05405385.1| alanine racemase [Mitsuokella multacida DSM 20544]
 gi|260847728|gb|EEX67735.1| alanine racemase [Mitsuokella multacida DSM 20544]
          Length = 369

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 101/376 (26%), Positives = 161/376 (42%), Gaps = 21/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N     +IDL AL++N+  +   + G A+  AVVK +AYG G   +A     AG     V
Sbjct: 3   NRAAWAEIDLAALRHNYEEIKKNIRGGAKLCAVVKADAYGHGALAVARVAVEAGASYLAV 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
            ++ E ++LR       I +L  + P + + I D ++  V+  +P     S+       +
Sbjct: 63  ATLGEAIELREAGFTVPILLLGLVLPDEARDIVDYDVTQVVCELPLAEAISREAVRQHKT 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+V+TG  R+G+  +E              ++  + SH A AD         QL +
Sbjct: 123 AKVHLKVETGMGRIGIRPEEIGALAAAVKQLPNIEIEGMFSHFAMADSKDKTYTKGQLAK 182

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--T 234
           F   +   +          +A S+ IL  P  H+ + R G+  YG       +HP+    
Sbjct: 183 FEQALRAVEEAGVKLKIRHIAESAAILEIPEAHYDMVRAGVIQYGMWPSDEVTHPIDLKP 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+   A+++ ++    GE + YG Q    R+S IA   IGYADGY               
Sbjct: 243 VMKVCAKVVFMKTLHPGESIGYGRQFIAERESRIATLPIGYADGYIRAYGN--------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTT 353
             GG     G   PI G++ MD  M D+TD   ++ GD   +FG + +  D  A    T 
Sbjct: 294 --GGYVSFGGRKAPIAGRVCMDQVMVDVTDLPDVKEGDTAVLFGDETVTADTAAKWLNTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   I  R  + Y
Sbjct: 352 NYEVTCLISPRVPRVY 367


>gi|134300698|ref|YP_001114194.1| alanine racemase [Desulfotomaculum reducens MI-1]
 gi|226711040|sp|A4J8G6|ALR_DESRM RecName: Full=Alanine racemase
 gi|134053398|gb|ABO51369.1| alanine racemase [Desulfotomaculum reducens MI-1]
          Length = 370

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 102/377 (27%), Positives = 168/377 (44%), Gaps = 23/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E +  +I+L A+++N   +  +   N    AVVK N YG G   +A     AG     V 
Sbjct: 3   EPIWAEINLEAIRHNIKEIRKMVGPNREIMAVVKANGYGHGAVPVARVALEAGATRLAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
            + E  +LR    +  I +L  I P Q     + N+   +         + +    G   
Sbjct: 63  RLSEAQELRRAGLKVPILLLGYISPDQIGDALEYNVTLTVFRFDLAKKIAAIAQGRGQRA 122

Query: 123 PYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VDTG  R+G +  E  L             +  I +H A AD+        Q +R
Sbjct: 123 TVHLKVDTGMGRIGFTPDEEGLAEITAVCALNGLDVEGIYTHFATADEQDKSYTRWQFKR 182

Query: 182 FRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP---MQ 233
           F  +++    +GI       A+S+ I+  P  +  L RPGI LYG             +Q
Sbjct: 183 FMLVLNRLEEQGITFSLRHCANSAAIMEFPETYLDLVRPGIILYGLYPSEEVDKGKLLLQ 242

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T +ARI  ++K  +G  +SYG    + +++ IA   +GYADGYP  LS         
Sbjct: 243 PAMTLKARITHVKKVNSGTKISYGCTYTVPQETDIASLPLGYADGYPRLLS--------- 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVALASGT 352
               G+  +KG    ++G++ MD  M D+     ++V D + IF G ++ +++VA   GT
Sbjct: 294 --SKGQVLVKGKRARVVGRVCMDQCMVDVGHIAEVKVHDEVIIFGGAELPVEEVATWLGT 351

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY+++  +G+R  + Y
Sbjct: 352 INYEVVCWVGSRVPRVY 368


>gi|325292459|ref|YP_004278323.1| Alanine racemase [Agrobacterium sp. H13-3]
 gi|325060312|gb|ADY64003.1| Alanine racemase [Agrobacterium sp. H13-3]
          Length = 391

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 186/368 (50%), Positives = 248/368 (67%), Gaps = 2/368 (0%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  LRL +DL AL +NW  M   SG ARTAAVVK +AYGLG E     LY+AG +DFFV 
Sbjct: 19  HAPLRLTVDLGALADNWRDMKKRSGKARTAAVVKADAYGLGIEDCGATLYHAGARDFFVA 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +V EG  LR Y P+ARIFVL GI  GQE+ +FD +L+PV++S  QL+F+   ++    HP
Sbjct: 79  TVSEGATLRSYAPEARIFVLSGIWQGQERQVFDNDLVPVLASEEQLSFWMATVAERGEHP 138

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            AL VDTGFNRLGL L +AL    +          L++SHLACAD PSS +N VQLE FR
Sbjct: 139 CALHVDTGFNRLGLPLDDALFLADDVTRPASFDPVLVLSHLACADTPSSPMNKVQLESFR 198

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            + + ++GIE+SL++S+GI LGP+YHF LTRPGI+LYGG    + ++PM+ V  AEARII
Sbjct: 199 KVSAAFEGIESSLSASAGIFLGPDYHFDLTRPGIALYGGEAINDVANPMRPVAKAEARII 258

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            IR+A  G+ VSYGG   L R S +A+A++GYADGY  +LSG           G  G + 
Sbjct: 259 QIREAGEGQTVSYGGTYLLKRASRLAIASVGYADGYQRSLSGSGIPLREMGHGGAYGIVN 318

Query: 304 GYMVPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           G+  P+ G++TMD+T+FDITD    ++  GDYI++FGP + LD+VA A+GT  Y++L  +
Sbjct: 319 GHKAPVAGRVTMDLTIFDITDIPANAVRTGDYIELFGPKVPLDEVARAAGTIGYEMLTGL 378

Query: 362 GTRYAKFY 369
           G RY + Y
Sbjct: 379 GLRYERQY 386


>gi|313903544|ref|ZP_07836934.1| alanine racemase [Thermaerobacter subterraneus DSM 13965]
 gi|313466097|gb|EFR61621.1| alanine racemase [Thermaerobacter subterraneus DSM 13965]
          Length = 394

 Score =  320 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 168/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +++DL A+ +N  ++  L+  A+  AVVK + YG G   +A      G +   V  
Sbjct: 11  RPTWVEVDLDAIAHNVQTLQRLAAPAQLMAVVKADGYGHGAVMVARTALAHGARRLAVAV 70

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           VEEGV LR       I V+    P Q  +     L   +SS  +    ++     G    
Sbjct: 71  VEEGVHLRQSAIACPILVMGWTPPWQYALALRYELELAVSSEEEARALAEAARRDGRKVR 130

Query: 124 YALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
             +++DTG  RLGL   +    +           +++ + +HLA ADDP + +   QL R
Sbjct: 131 VHIKIDTGMGRLGLRWDQPRLAEVVARIAGLGGLEVAGVFTHLATADDPEAPLTEDQLGR 190

Query: 182 FRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQT 234
           F  ++     +G+   L  ++     L  P   + L RPGI+LYG         +  +Q 
Sbjct: 191 FDRVLQALDERGLRPGLRHAANSAALLRLPGARYDLVRPGIALYGLEPFPGAVAAFGLQP 250

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + R+ L+++   G  +SYG      R S IA   +GYADG    LS          
Sbjct: 251 ALAWKTRVALVKEVPPGTPISYGATFVTRRRSRIATLPVGYADGLRRALSNR-------- 302

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALAS 350
              G+  + G  VPI+G++ MD  M D+TD+  + VGD + +     G  I  D++A   
Sbjct: 303 ---GQVLVGGRRVPIVGRVCMDQVMVDVTDAGPVAVGDEVVLIGRQGGEQITADEMAGWM 359

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y+++  IG R  + Y
Sbjct: 360 DTIGYEVVTGIGRRVPRIY 378


>gi|302390446|ref|YP_003826267.1| alanine racemase [Thermosediminibacter oceani DSM 16646]
 gi|302201074|gb|ADL08644.1| alanine racemase [Thermosediminibacter oceani DSM 16646]
          Length = 391

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 170/378 (44%), Gaps = 26/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R++I+L  L++N   +  ++  NA   AVVK +AYG G  ++A    + G +   V 
Sbjct: 6   RPTRVEINLDNLEHNLKEIRRITSPNAGICAVVKADAYGHGAVEVAMTALSFGAKYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E V LR    +A I +L      Q   I +  +   + +V      S+     G+  
Sbjct: 66  FLDEAVVLREAGIRAPILILGFTPEDQFDKILEYGITQTVYNVRSAEVLSREAQKRGMKA 125

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG +R+G   +  +L      F     ++  I +H A AD+        Q ++
Sbjct: 126 KVHIKLDTGMSRIGFPAEPSSLSDIEKVFLLPGIEVEGIFTHFARADEEDKSFTEEQYKK 185

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           +R  +        +     +A+S+ I+  P  H  + RPGI LYG               
Sbjct: 186 YRETVGVLESRGLRVPIKHVANSAAIIDMPGMHLDMVRPGIILYGIYPSEEVQRSRITLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T + R+  ++   AG  +SYGG     + S+IA   +GYADGYP  LS         
Sbjct: 246 PVMTFKTRVSHVKTVPAGTPISYGGTFVTKKTSVIATLPVGYADGYPRLLSSR------- 298

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                +  IKG   P++G++ MD  M D+TD   ++ GD +++FG      +  D++A  
Sbjct: 299 ----AEVVIKGRRAPLVGRVCMDQCMVDVTDIPGVQPGDEVELFGTGENGGVTADEIAKI 354

Query: 350 SGTTNYDLLVRIGTRYAK 367
            GT  Y+++  I  R  +
Sbjct: 355 VGTIPYEIVCGISKRVPR 372


>gi|51894072|ref|YP_076763.1| alanine racemase [Symbiobacterium thermophilum IAM 14863]
 gi|81826014|sp|Q67K79|ALR_SYMTH RecName: Full=Alanine racemase
 gi|51857761|dbj|BAD41919.1| alanine racemase [Symbiobacterium thermophilum IAM 14863]
          Length = 377

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 108/377 (28%), Positives = 171/377 (45%), Gaps = 23/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                ++DL A++ N  ++  +S   R  AVVK N YG G   +A A   AG     V S
Sbjct: 7   RPTWAEVDLNAVRANIRALKRISKAPRLMAVVKANGYGHGAVPVATAAIEAGADWLGVAS 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHP 123
           VEEGV LR +   A I VL  + PGQ + +    L   +         ++     G    
Sbjct: 67  VEEGVTLRRHGISAPILVLGYVSPGQAEAVLTEGLRVALFDGELGQALNREGRRLGRWAR 126

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF- 182
             L+VDTG  R+GL   E              ++  + +HLA AD+P +    +QLER+ 
Sbjct: 127 VHLKVDTGMGRIGLQPAEVGRLGRELARLDHVEVEGVFTHLATADEPGNPYTRLQLERYE 186

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--TVV 236
                   +  +      A+S+G++L P  H+ + R GI++ G       + P++    +
Sbjct: 187 AALAELAAAGVRPAIRHAANSAGLMLHPEAHYDMVRSGIAVVGLPPAPGVAWPVKLAPAL 246

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T + R+ L++   AG  +SYG      R   IA   +GYADGYP  LS            
Sbjct: 247 TWKTRVGLVKWLEAGHSISYGCTYTTARREQIATLPVGYADGYPRRLSNR---------- 296

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
             +  I+G   P++G +TMD  M  + D L + VGD + +     G +I   ++A  + T
Sbjct: 297 -AQVLIRGRRCPVVGVVTMDQMMVRVPDDLPVRVGDEVVLIGRQGGEEITATELAGLADT 355

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y+++  I  R  +FY
Sbjct: 356 ISYEIVCGISRRVPRFY 372


>gi|222148127|ref|YP_002549084.1| alanine racemase [Agrobacterium vitis S4]
 gi|221735115|gb|ACM36078.1| alanine racemase [Agrobacterium vitis S4]
          Length = 387

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 186/366 (50%), Positives = 243/366 (66%), Gaps = 2/366 (0%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            LR+ IDL AL +NW  M   SG AR  AVVK + YG+G E     LYNAG +DFFV   
Sbjct: 18  PLRVTIDLQALADNWRDMAKRSGKARAGAVVKADGYGIGIEDSGQTLYNAGARDFFVALP 77

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            EG  LR Y P ARIFVL GI  G E + F+ +L+PVI+S  QL F+ + ++    HP A
Sbjct: 78  SEGATLRTYAPDARIFVLSGIWEGMEPLFFEHDLVPVIASEEQLAFWMRTVADQGDHPCA 137

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L VDTGFNRLGLS+ +AL    +          LI+SHLACADDPSS +N  QL+ F  +
Sbjct: 138 LHVDTGFNRLGLSMDDALFLATDVSRPASFSPVLILSHLACADDPSSPMNQKQLQAFHQV 197

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + ++GIE+SL++S+G LLGP+YHF LTRPGI+LYGG       +PM+ VV AEARI+ I
Sbjct: 198 SAAFEGIESSLSASAGTLLGPDYHFDLTRPGIALYGGEAVTGLPNPMRPVVKAEARILQI 257

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+A  GE VSYG   +LTR+S +AVA++GYADGY   LSG  +    +   G  G I GY
Sbjct: 258 RQARNGETVSYGATCQLTRESRLAVASVGYADGYLRNLSGHGTALRDTGSPGAYGSIAGY 317

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
            VP++G+ITMDMT+FD++D     I  GDYI++FGP++ +DDVA A+GT  Y++L  +G 
Sbjct: 318 QVPVVGRITMDMTIFDVSDVPEKAIAAGDYIELFGPNMPIDDVARAAGTIGYEMLTGLGL 377

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 378 RYERHY 383


>gi|90417095|ref|ZP_01225023.1| alanine racemase [marine gamma proteobacterium HTCC2207]
 gi|90331111|gb|EAS46367.1| alanine racemase [marine gamma proteobacterium HTCC2207]
          Length = 358

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 169/370 (45%), Gaps = 18/370 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  IDL AL++N+    +L+  ++T  +VK NAYG G  K++ AL +     F V 
Sbjct: 2   SRPTKAVIDLQALRHNYELAQSLAPKSKTIPMVKANAYGHGAIKVSQALSDI-APAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE ++LR    +  I +L G     E  +  T    V+    Q           +   
Sbjct: 61  CIEEALELRDTGIKQPILLLEGTFEATELKLAATKGFWVMVENHQQKEAILNADLALPLN 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L VDTG +RLG    E  D     + ++ + Q  +  SH ACAD+  S     Q++ F
Sbjct: 121 VWLGVDTGMHRLGFQPGEIADIYKTLNSSRNISQPIVFTSHFACADNLDSDSTLKQIQTF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAE 239
           +           SLA+S+ IL  P    +  RPG  LYG +        +  ++ V++ E
Sbjct: 181 KAC--APVTALQSLANSAAILAWPKAQREWQRPGYMLYGNSPFAVAQENADQLKPVMSFE 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +R   AGE V Y       R+S IA   +GY DGYP                G  
Sbjct: 239 SAVISLRTIAAGESVGYTANWTAERESTIATITVGYGDGYPRNAIN-----------GTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G   P++G+++MDM   D+T    + +GD   ++GP++ +++VA    T  Y+LL 
Sbjct: 288 VLINGIRCPLVGRVSMDMITVDVTALSEVAIGDKAVLWGPELPVNEVASYCDTIGYELLT 347

Query: 360 RIGTRYAKFY 369
           R+  R  + Y
Sbjct: 348 RMPERVPRVY 357


>gi|254481208|ref|ZP_05094453.1| alanine racemase [marine gamma proteobacterium HTCC2148]
 gi|214038371|gb|EEB79033.1| alanine racemase [marine gamma proteobacterium HTCC2148]
          Length = 360

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 108/374 (28%), Positives = 166/374 (44%), Gaps = 19/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M      RL  DL AL++N      L+   +   VVK N YG G   +A           
Sbjct: 1   MARANQARL--DLAALRHNLAHARQLAPECKVMCVVKANGYGHGALNVARVFAPM-ADAL 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR    +  I +L G+   QE II       V+    Q  ++ +      
Sbjct: 58  AVACIEEAIELRDGGIETPILLLQGVFEAQELIIASQQNFWVMVDNRQHLYWLEQARLPA 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQL 179
                L++DTG +RLG+  +EA +F     + +      +  +H A AD+      + QL
Sbjct: 118 PVTCWLKIDTGMHRLGVQPEEAAEFHQRLSSCENRTGELVTCTHFASADELDKPQTTEQL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVV 236
             F ++ +   G   S A+SSG+L  PN H+   RPG  LYG +              V+
Sbjct: 178 ALFESITADLPG-PRSAANSSGLLGWPNSHYDWIRPGYMLYGNSPFTATHPNTDTLHPVM 236

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I IR   +GE V Y       R S IA  +IGY DGYP   +            
Sbjct: 237 TLCSAVISIRNVASGESVGYAANWTAQRPSRIATVSIGYGDGYPRLAAN----------- 285

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    I G   P+ G+++MDM   DITD   +++GD + ++G ++ + +VA  +GT  Y+
Sbjct: 286 GTPVLINGQRAPLAGRVSMDMITVDITDLDDVKLGDQVILWGEELPVSEVAAHAGTIGYE 345

Query: 357 LLVRIGTRYAKFYT 370
           L  R+  R  +  T
Sbjct: 346 LTTRMPARTPRVVT 359


>gi|312142736|ref|YP_003994182.1| alanine racemase [Halanaerobium sp. 'sapolanicus']
 gi|311903387|gb|ADQ13828.1| alanine racemase [Halanaerobium sp. 'sapolanicus']
          Length = 377

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 24/381 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            S   + ++IDL  LK N   +   L+ +    AVVK + YG G    A A   AG    
Sbjct: 7   KSKRPVWVEIDLNNLKFNIKEIKKTLNSDTIFTAVVKADGYGHGAVPTAEAAIEAGADRL 66

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCG 119
            V   EEG++LR     A I +L  + P Q   +   +LIP IS        +       
Sbjct: 67  AVAIPEEGIELREAGIAAPIEILGELLPEQLPELIRYDLIPTISKFKTAERLNNLCAGYN 126

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +     L +DTG NR+G++ ++AL            ++  I++H A AD+       +Q 
Sbjct: 127 LKKKIHLNIDTGMNRVGVNYKKALPLLKKITELPNLEIEGIMTHFARADELEKEYTLIQW 186

Query: 180 ERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPM 232
           ERF  LI   +           A+S+ ++  P +   + R GI +YG   +  +  +  +
Sbjct: 187 ERFNQLIEKLEAENIEIPIKHCANSAAVIDFPEFALDMVRAGIMIYGLKPSPDLKNNFNL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ ++RI+ ++   AGE +SYG +    +   IA   +GYADGY   L         
Sbjct: 247 KAVLSWKSRIVRLKDVPAGEGISYGSEYITPKREKIATIPLGYADGYARILGN------- 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    +KG   PI G+I MD  M D++    ++VGD + + G      +  D +A 
Sbjct: 300 ----KASVLVKGKRAPIRGRICMDQFMVDVSGIEGVKVGDEVVLIGSQNGLSLSADKLAE 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT NY+++ RI  R A+ Y
Sbjct: 356 QAGTINYEIVSRISKRVARIY 376


>gi|225174429|ref|ZP_03728428.1| alanine racemase [Dethiobacter alkaliphilus AHT 1]
 gi|225170214|gb|EEG79009.1| alanine racemase [Dethiobacter alkaliphilus AHT 1]
          Length = 379

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 168/381 (44%), Gaps = 26/381 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                 +IDL A+ +N        S   R  A+VK + YG G  ++A     AGV    V
Sbjct: 6   QRPAWAEIDLGAIGHNIRQFKQHVSSQTRLMAIVKADGYGHGAVEVAREAVAAGVSFLGV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVS 121
             VEE ++LR       I +L          +   NL P + +      F    +  G  
Sbjct: 66  GMVEEALELRENGIDTPILILGFTPKAYAPYLCQYNLTPTVFTPEEADAFAEAALRAGND 125

Query: 122 HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               ++VDTG  R+G    ++A  F  +  +     L+ + +H A ADDP +     QLE
Sbjct: 126 LAVHVKVDTGMGRVGCFPCEDADGFISHVASLPGLSLTGLYTHFAAADDPDATYTRWQLE 185

Query: 181 RFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           RF  LI+  +     +      +S+G +  P  H  + R GIS+YG         +   +
Sbjct: 186 RFLKLIARLEARGIHIPVKHAANSAGAISHPETHLDMVRLGISVYGLYPADEVCRREVKL 245

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ +A++I ++   AG  VSYG      R + IA   +GY DGYP  LS        
Sbjct: 246 RPAMSLKAKVIFVKDVPAGTKVSYGCTYVTERAARIATLPLGYGDGYPRHLSNC------ 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                G+  I G   P++G++ MD+TM D+ D   +  GD + +FG      + +D+VA 
Sbjct: 300 -----GQVLIHGRRAPVVGRVCMDLTMIDVQDIAEVSAGDEVVLFGRQGDAFLSVDEVAR 354

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY+++ RI  R  + Y
Sbjct: 355 WIDTINYEVVTRISRRIPRVY 375


>gi|227821452|ref|YP_002825422.1| alanine racemase [Sinorhizobium fredii NGR234]
 gi|227340451|gb|ACP24669.1| alanine racemase [Sinorhizobium fredii NGR234]
          Length = 409

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 178/375 (47%), Positives = 241/375 (64%), Gaps = 6/375 (1%)

Query: 1   MHSNEFL----RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           MHS EFL    RL IDLTA+ +NW +MN  SG AR AAV+K NAYG+G  + AP LY AG
Sbjct: 31  MHSPEFLAASNRLTIDLTAIADNWRTMNERSGKARAAAVLKANAYGIGVAQAAPTLYAAG 90

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
            +DFFV   EEG +LR   P ARI++L G+ PG E+  F  +L+P+I+S  QL  +   +
Sbjct: 91  ARDFFVADAEEGAELRPLLPDARIYILAGMWPGNEEFFFANDLVPIINSEEQLAVFMAAL 150

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           S    HP  L VDTG NRLGLS++EA+   H+          L++SHLAC DDP   +N 
Sbjct: 151 SERGDHPCVLHVDTGMNRLGLSVEEAIALAHDPARPASFSPVLVMSHLACGDDPRHPMNL 210

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
            QL+RFR + + ++G+ ASLA+S G+ LG +YHF LTRPGI++YGG    +  +PM+ VV
Sbjct: 211 YQLQRFREVTAAFEGVPASLANSGGVFLGEDYHFDLTRPGIAVYGGEAVNDALNPMKPVV 270

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           TAEARI+ +R   +G   SYG   +  RDS IA  AIGYADGY  ++SG       +   
Sbjct: 271 TAEARILQLRTVPSGGTASYGASARFARDSRIATVAIGYADGYHRSVSGGGVTLRQATPS 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN 354
           G  GF+ G  VP +G++TMD+++FD+TD     +  GDYI++FG ++ +DDVA A GT  
Sbjct: 331 GAYGFLHGKKVPHVGRVTMDLSLFDVTDLPERAVRAGDYIELFGRNVAIDDVARAGGTIG 390

Query: 355 YDLLVRIGTRYAKFY 369
           Y+LL  +G RY + Y
Sbjct: 391 YELLTSLGHRYCRTY 405


>gi|317121110|ref|YP_004101113.1| alanine racemase [Thermaerobacter marianensis DSM 12885]
 gi|315591090|gb|ADU50386.1| alanine racemase [Thermaerobacter marianensis DSM 12885]
          Length = 394

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 164/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +++DL A+ +N  ++  L+  A+  AVVK + YG G   +A      G +   V  
Sbjct: 11  RPTWVEVDLDAIAHNVQTLQRLAAPAQLMAVVKADGYGHGAVMVARTALAHGARRLAVAV 70

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHP 123
           VEEGV LR       I V+    P Q  +    +L   +SS              G    
Sbjct: 71  VEEGVHLRQSAIACPILVMGWTPPWQYSLALRYDLELAVSSEDEARALAEAARREGRKVR 130

Query: 124 YALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
             L+VDTG  RLGL        +           ++  + +HLA ADDP + +   QL R
Sbjct: 131 VHLKVDTGMGRLGLRWDHPRLAETAARIAGLGGLEVVGVFTHLATADDPEAPLTEDQLAR 190

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQT 234
           F  ++        + +    A+S+ +L  P   + L RPGI+LYG         +  ++ 
Sbjct: 191 FARIVHALDERGLRPLLRHAANSAALLRLPGARYDLVRPGIALYGLEPFPGAVAAFGLRP 250

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + R+ L+++   G  +SYG      R S IA   +GYADG    LS          
Sbjct: 251 ALAWKTRVALVKEVPPGTPISYGATFVTRRRSRIATLPVGYADGLRRALSNR-------- 302

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
              G+  + G   PI+G++ MD  M D+TD+  + VGD + + G      I  D++A   
Sbjct: 303 ---GQVLVGGRRAPIVGRVCMDQVMVDVTDAGPVAVGDEVVLIGRQGDQQITADEMAGWM 359

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y+++  IG R  + Y
Sbjct: 360 DTIGYEVVTGIGRRVPRIY 378


>gi|150402682|ref|YP_001329976.1| alanine racemase [Methanococcus maripaludis C7]
 gi|150033712|gb|ABR65825.1| alanine racemase [Methanococcus maripaludis C7]
          Length = 373

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 169/384 (44%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S+  +  +IDL+A+KNN   +  ++   ++  AVVK NAYG G  +++      G   
Sbjct: 1   MVSH-PIWAEIDLSAIKNNIQEIRRITNPKSQVMAVVKANAYGHGAIEVSKVCLENGADR 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
             V    E ++LR       I V       + + + + ++   + S        K+    
Sbjct: 60  LAVARSTEALELRNAGITCPILVFGYCTEEEIEKMVENDITLTVYSFETAESIQKIAEKL 119

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      ++VDTG  RLG    +EA++        K  ++  I +H A AD+      ++
Sbjct: 120 GKHSKIHIKVDTGMGRLGFLPKKEAIETIKKIMELKNIKIEGIYTHFADADNSDKSYTTM 179

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKI---NKS 229
           Q  RF   + + +  E  +      +S+ I+  P  H  L RPGI LYG         + 
Sbjct: 180 QFSRFTNFLHNLEENEIFIPIKHASNSAAIIDHPETHLNLVRPGIILYGLYPSELVHKER 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  ++ +  I  +++      +SYG   +  + S IA   IGYADG+   L      
Sbjct: 240 INLKPAMSLKVLITHVKEVPENTKISYGCTFETKKPSKIASLPIGYADGFTRMLKD---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G   I G  VP++G+I MD  M D++D  +++VGD + IFG      I +++
Sbjct: 296 --------GYVLIHGSRVPVIGRICMDQCMIDVSDIENVQVGDVVTIFGTQENEKIPIEE 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
                GT NY+L+  +  R  + Y
Sbjct: 348 FGEKLGTINYELVCMVAGRVPRKY 371


>gi|15888423|ref|NP_354104.1| alanine racemase [Agrobacterium tumefaciens str. C58]
 gi|20137302|sp|P58736|ALR1_AGRT5 RecName: Full=Alanine racemase, biosynthetic
 gi|15156111|gb|AAK86889.1| alanine racemase [Agrobacterium tumefaciens str. C58]
          Length = 391

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 183/368 (49%), Positives = 246/368 (66%), Gaps = 2/368 (0%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              LRL +DL AL +NW  M   SG ARTAAVVK +AYGLG E     LY+AG +DFFV 
Sbjct: 19  QAPLRLTVDLGALADNWRDMKKRSGRARTAAVVKADAYGLGIEDCGATLYHAGARDFFVA 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +V EG  LR Y P+ARIFVL GI  GQE+ +FD +L+PV++S  QL+F+   ++    HP
Sbjct: 79  TVAEGATLRSYAPEARIFVLSGIWQGQERQVFDNDLVPVLASEEQLSFWMATVAERGDHP 138

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            AL VDTGFNRLGL L +AL    +          L++SHLACAD PSS +N  QLE FR
Sbjct: 139 CALHVDTGFNRLGLPLDDALFLADDVTRPASFDPVLVLSHLACADTPSSPMNRAQLESFR 198

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            + + ++GIE+SL++S+GI LGP+YHF LTRPGI+LYGG    + ++PM+ V  AEARII
Sbjct: 199 RVSAAFEGIESSLSASAGIFLGPDYHFDLTRPGIALYGGEAVNDVANPMRPVAKAEARII 258

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            IR+A  G+ VSYG    L R S +A+A++GYADGY  +LSG           G  G + 
Sbjct: 259 QIREAGEGQTVSYGSSFLLKRASRLAIASVGYADGYQRSLSGSGIPLREMGHGGAYGVVN 318

Query: 304 GYMVPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           G+ VP+ G++TMD+T+FD+TD    +I  GDYI++FGP++ +D+ A A+GT  Y++L  +
Sbjct: 319 GHKVPVAGRVTMDLTIFDVTDVPANAIRAGDYIELFGPNVPVDETARAAGTIGYEMLTGL 378

Query: 362 GTRYAKFY 369
           G RY + Y
Sbjct: 379 GLRYERQY 386


>gi|159905543|ref|YP_001549205.1| alanine racemase [Methanococcus maripaludis C6]
 gi|159887036|gb|ABX01973.1| alanine racemase [Methanococcus maripaludis C6]
          Length = 373

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 172/384 (44%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S+  +  +IDL+A+KNN   +  ++   ++  AVVK NAYG G  +++      G   
Sbjct: 1   MVSH-PIWAEIDLSAIKNNIKEIRRITNPKSQVMAVVKANAYGHGAIEVSKVCLENGADR 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V    E ++LR       I V       + + + + ++I  + S+       K+    
Sbjct: 60  LAVARSTEALELRNAGITCPILVFGYCTEEEIEKMVENDIILTVYSLETANSIQKIAEKL 119

Query: 120 VSHPY-ALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
             HP   +++DTG +RLG   + EA++        K  ++  I +H A AD+      ++
Sbjct: 120 GEHPKIHIKLDTGMSRLGFLPEKEAVEAIQKIMELKNIEVEGIYTHFADADNSDKTYTTM 179

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKI---NKS 229
           Q  RF   +   +  E  +      +S+ I+  P  H  L RPGI LYG         + 
Sbjct: 180 QFSRFTNFLHDLEENEIFIPIKHASNSAAIIDHPETHLNLVRPGIILYGLYPSELVHKER 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  ++ +  +  +++      +SYG   +  + S IA   IGYADG+   L      
Sbjct: 240 IDLKPAMSLKVLVTHVKEVPENTKISYGCTFETKKPSKIASLPIGYADGFTRMLKD---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G   I G  VP++G+I MD  M D++D  +++VGD + IFG      I +++
Sbjct: 296 --------GYVLIHGSRVPVIGRICMDQCMIDVSDIENVQVGDVVTIFGTQEHEKIPIEE 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
                GT NY+L+  +  R  + Y
Sbjct: 348 FGEKLGTINYELVCMVANRVPRKY 371


>gi|222085428|ref|YP_002543958.1| alanine racemase [Agrobacterium radiobacter K84]
 gi|221722876|gb|ACM26032.1| alanine racemase [Agrobacterium radiobacter K84]
          Length = 387

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 185/365 (50%), Positives = 243/365 (66%), Gaps = 2/365 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DL AL  NW  M   SG ART+AVVK +AYGLG E +  ALY AG +DFFV + +
Sbjct: 16  LRLTVDLDALVENWRDMAHRSGRARTSAVVKADAYGLGIEDVGEALYLAGARDFFVATAD 75

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG  LRLY P ARIFVL GI PG E++ F+ +L+PVI+S  QLTF+  ++S    +P AL
Sbjct: 76  EGATLRLYAPDARIFVLSGIWPGMERVFFENDLVPVIASEEQLTFWMSVLSDYGDYPCAL 135

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDTGFNRLGL +++AL    +          L++SHLAC DDP++ +N  QLE FR + 
Sbjct: 136 QVDTGFNRLGLPMEDALALADDVSRPASFAPVLVMSHLACGDDPANPMNRQQLEAFRKVS 195

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + ++GIEASLA+S+GI LGP YHF LTRPGI+ YGG      ++PM+ V TAEARII  R
Sbjct: 196 AAFEGIEASLANSAGIFLGPEYHFDLTRPGIATYGGEAVPGIANPMRPVATAEARIIQTR 255

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YG   +LTRDS +A+ + GYADGY    S        +   GG GFI G+ 
Sbjct: 256 FVKAGETVGYGRAMQLTRDSRLAIVSAGYADGYMRGQSSGGVPLRQTDLPGGHGFIAGHR 315

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+ITMD+T+FDITD     +  GDY+++FG +I +DD A A+GT  Y++L  +G R
Sbjct: 316 VPVAGRITMDLTIFDITDLPDNLVRAGDYVELFGSNILVDDAARAAGTIGYEMLTSLGLR 375

Query: 365 YAKFY 369
           + + Y
Sbjct: 376 HERRY 380


>gi|227824623|ref|ZP_03989455.1| alanine racemase [Acidaminococcus sp. D21]
 gi|226905122|gb|EEH91040.1| alanine racemase [Acidaminococcus sp. D21]
          Length = 381

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 22/380 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M +   +  ++DL+A+ +N       L    +  AVVK +AYG G   +A A   AGV  
Sbjct: 1   MRARN-VWAEVDLSAIAHNVQVTRKVLKPGTKICAVVKADAYGHGAVPVATAALAAGVNY 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSC 118
             V+  +E ++LR     A I +L  +    EK + D N+   +  +       +  +  
Sbjct: 60  LAVSMTQEALELREAGIMAPILILGTMTEEHEKALVDYNITQTVYDLAVAQELSAAALQE 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L VDTG NR+G   +EA D           +L  + SH A AD+        Q
Sbjct: 120 NKVAKVHLAVDTGMNRIGCRPEEAADLAEAISKLPHVELEGMFSHFASADEMDKSFAESQ 179

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHP 231
             +F       K          + +S+GI    +    + R GI+LYG      + +   
Sbjct: 180 YRKFMEADRAIKDRGIQIPLVHIDNSAGITEMKHTECDMVRQGITLYGLWPSDDVERCLD 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++ +A ++ ++   AGE + YG   +      +A   +GYADGY   LS       
Sbjct: 240 LKPALSLKAEVVFVKDVPAGEKIGYGCTYETKAPMKVATIPLGYADGYSRALSNR----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALAS 350
                 G   I+GY  P++G+I MD  M D+T+   +  GD   IFGP  + LD +A   
Sbjct: 295 ------GYITIRGYKAPVVGRICMDQFMVDVTNVPGVHKGDEAVIFGPGGVSLDQLAKWV 348

Query: 351 GTTNYDLLVRIGTRYAKFYT 370
           GT  Y+L+  + TR  + YT
Sbjct: 349 GTIPYELMCLLSTRVPRKYT 368


>gi|167036911|ref|YP_001664489.1| alanine racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|167039616|ref|YP_001662601.1| alanine racemase [Thermoanaerobacter sp. X514]
 gi|256751517|ref|ZP_05492394.1| alanine racemase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915134|ref|ZP_07132449.1| alanine racemase [Thermoanaerobacter sp. X561]
 gi|307725058|ref|YP_003904809.1| alanine racemase [Thermoanaerobacter sp. X513]
 gi|320115330|ref|YP_004185489.1| alanine racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166853856|gb|ABY92265.1| alanine racemase [Thermoanaerobacter sp. X514]
 gi|166855745|gb|ABY94153.1| alanine racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|256749601|gb|EEU62628.1| alanine racemase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888858|gb|EFK84005.1| alanine racemase [Thermoanaerobacter sp. X561]
 gi|307582119|gb|ADN55518.1| alanine racemase [Thermoanaerobacter sp. X513]
 gi|319928421|gb|ADV79106.1| alanine racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 388

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 159/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L  + +N   +    G   +   VVK NAYG G  ++A  L   GV    V 
Sbjct: 6   RPTRAEIYLDNIVHNLSEVKRWVGKKVKIMGVVKANAYGHGACQVAKVLIENGVSYLGVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EE ++LR       I V       Q K +   N+   +  +  +    ++    G   
Sbjct: 66  TIEEALELRECGINIPILVFGYTPLPQAKELIVHNITQTVFDINYVKDLERIALNVGKKA 125

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              ++VDTG  R+G   L  A          +  ++  I SH A +D+        Q + 
Sbjct: 126 KVHVKVDTGMGRIGYTDLNVAEKEIEKMMEMEGVEVEGIFSHFATSDEKDKTYAEQQFDM 185

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQT 234
           F+ L+   K  E       +A+S  I+     +  + RPGI LYG     N   P  ++ 
Sbjct: 186 FKKLLESLKQKEINIPLKHIANSGAIIDLKYTYLDMVRPGIVLYGSYPSENVERPLDLRQ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++   G  +SYG      R S IA   +GYADG+   LS          
Sbjct: 246 TMGFKTKIVYIKEVPEGTSISYGRTFITKRKSKIATLPVGYADGFNRLLSNNH------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  +KG   P++G+I MD TM D+TD   +EVGD + IFG      I  +++A   
Sbjct: 299 ----HVLVKGKYAPVIGRICMDQTMLDVTDIEGVEVGDDVTIFGNQDGEKITAEEIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   I  R  + Y
Sbjct: 355 NTIPYEVYCGISRRVPRIY 373


>gi|326390394|ref|ZP_08211952.1| alanine racemase [Thermoanaerobacter ethanolicus JW 200]
 gi|325993512|gb|EGD51946.1| alanine racemase [Thermoanaerobacter ethanolicus JW 200]
          Length = 384

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 162/379 (42%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L  + +N   +    G   +   VVK NAYG G  ++A  L   GV    V 
Sbjct: 6   RPTRAEIYLDNIVHNLSEVKRWVGKKVKIMGVVKANAYGHGACQVAKVLIENGVSYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EE ++LR       I V+      Q K +   N+   +  +  +    ++    G   
Sbjct: 66  TIEEALELRECGINIPILVIGYTPLTQAKELIVHNITQTVFDINYVKDLERIALNVGKKA 125

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G   L+ A          +  ++  I SH A +D+ +      Q + 
Sbjct: 126 KVHVKIDTGMGRIGYTDLKVAEKEIEKMMEMEGVEVEGIFSHFATSDEKNKTYAEKQFDV 185

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQT 234
           F+ L+   K          +A+S  I+     +  + RPGI LYG     ++ +   ++ 
Sbjct: 186 FKKLLERLKEKRINIPLKHIANSGAIIDLKYTYLDMVRPGIVLYGSYPSEEVERPLDLKQ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++   G  +SYG      R S IA   +GYADG+   LS          
Sbjct: 246 TMGFKTKIVHIKEVPEGTSISYGRTFITKRKSKIATLPVGYADGFNRLLSNNH------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  +KG   P++G+I MD TM D+TD   +E+GD + IFG      I  D++A   
Sbjct: 299 ----HVLVKGKYAPVIGRICMDQTMIDVTDIEGVELGDDVVIFGNQEGEKITADEIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   I  R  + Y
Sbjct: 355 NTIPYEVYCGISRRVPRIY 373


>gi|134045109|ref|YP_001096595.1| alanine racemase [Methanococcus maripaludis C5]
 gi|132662734|gb|ABO34380.1| alanine racemase [Methanococcus maripaludis C5]
          Length = 373

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S+  +  +IDL+A+KNN   +  ++   ++  AVVK NAYG G  +++      G   
Sbjct: 1   MVSH-PIWAEIDLSAIKNNIEEIRRITNPKSQVMAVVKANAYGHGAVEVSKVCLENGADR 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
             V    E ++LR       I V       + + + + ++   + S    +   K     
Sbjct: 60  LAVARSTEALELRNAGITCPILVFGYCTEEEIEKMVENDITLTVYSFETASSIQKTAEKL 119

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      ++VDTG +RLG    ++A++        +  ++  I +H A AD+      ++
Sbjct: 120 GKHPKIHIKVDTGMSRLGFLPRKDAVETIQKIMELENIEVEGIYTHFADADNSDKTYTTL 179

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKI---NKS 229
           Q  RF   +   +  E  +      +S+ I+  P  H  L RPGI LYG         + 
Sbjct: 180 QFSRFTNFLHDLEENEIFIPIKHASNSAAIIDHPETHLNLVRPGIILYGLYPSELVHKER 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  ++ +  +  +++      +SYG   +  + S IA   IGYADG+   L      
Sbjct: 240 INLKPAMSLKVLVTHVKEVPENTKISYGCTFETKKPSKIASLPIGYADGFTRMLKN---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G   I G  VP++G+I MD  M D++   +++VGD + IFG      I +++
Sbjct: 296 --------GYVLIHGSRVPVIGRICMDQCMIDVSYIENVQVGDVVTIFGTQENETIPIEE 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
                GT NY+L+  + +R  + Y
Sbjct: 348 FGEKLGTINYELVCMVASRVPRKY 371


>gi|304437288|ref|ZP_07397248.1| alanine racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369780|gb|EFM23445.1| alanine racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 368

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 98/376 (26%), Positives = 165/376 (43%), Gaps = 22/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N     +IDL AL +N+  + +     A+  AVVK +AYG G    A    + G     V
Sbjct: 3   NRAAWAEIDLGALAHNYREIRSRIQKGAKLCAVVKADAYGHGAIAAARVALDEGADYLAV 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
            ++ E +KLR     A + +L  + P   + + D ++   +  +  +   S+     G +
Sbjct: 63  ATLSEALKLRAAGFTAPLLILGLVEPESAREVVDGDITQTVCRMDLVEALSQEAVRQGKT 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L ++TG  R+G+  ++A +           +L  + SH A AD P       Q++ 
Sbjct: 123 VKVHLTIETGMGRIGVHPKDAAETAKKIAALPNVELEGVFSHFALADIPDKTFTKQQVKL 182

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QT 234
           F+      +     +       S+ IL  P+ HF + R GI  YG       + P+  + 
Sbjct: 183 FKDACDAIEAAGIHIPIKHIAESAAILEIPDVHFDMVRAGIIQYGLWPSDEVTCPIDLRP 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ARI+ I+    GE V YG +    R++ IA   +GYADGY               
Sbjct: 243 CMKFCARIVYIKTIQPGESVGYGRKFIAERETRIATLPVGYADGYIRA------------ 290

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTT 353
           + GG   + G   PI G++ MD  M D+TD    ++GD   +FG D +  D++A  + T 
Sbjct: 291 YAGGSVEVCGKRAPIAGRVCMDQFMIDVTDIPEAKLGDVCTLFGSDSLTADEIAGWANTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLVSERVPRVY 366


>gi|15893783|ref|NP_347132.1| alanine racemase [Clostridium acetobutylicum ATCC 824]
 gi|20137418|sp|Q97LR2|ALR1_CLOAB RecName: Full=Alanine racemase 1
 gi|15023352|gb|AAK78472.1|AE007563_12 Alanine racemase [Clostridium acetobutylicum ATCC 824]
 gi|325507906|gb|ADZ19542.1| alanine racemase [Clostridium acetobutylicum EA 2018]
          Length = 386

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 106/384 (27%), Positives = 168/384 (43%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +IDL  +  N   +   S +     VVK +AYG G   +AP L   G   
Sbjct: 1   MFRHIRPVWAEIDLDNIAYNMQQIRRCSKSDEIIGVVKADAYGHGAVDVAPVLLENGANR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
             V  + E V+LR    Q  I +L          I   ++   + S       S+     
Sbjct: 61  LAVAVISEAVELRKSGIQCPIMILGYTPLSLVDSIIKYSIEQTVFSYDYAEKLSEAARQK 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            ++    + +DTG  R+G    +E++   +         +  I SH + +D+ +      
Sbjct: 121 NITLRIHIALDTGMGRIGFLPTEESVWEVYKISKLSNIIIEGIFSHFSTSDETNKEYTYA 180

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           QL++F    +  +          + +S+ I+  P  HF+ TRPGI LYG           
Sbjct: 181 QLKKFEWFYNELRKKNIKINIRHIGNSAAIMELPETHFEATRPGIILYGYYPSNEVDKNK 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ ++T +  ++ I+K + GE VSYG + K  R+S+IA   +GYADGY   LSG    
Sbjct: 241 LNLKPIMTLKTNVVHIKKMMPGEYVSYGRKFKCERESIIATLPVGYADGYTRMLSG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                    K  I G   P++G+I MD  M DITD  S++VGD + I G         DD
Sbjct: 297 -------KAKVIINGNYAPVIGRICMDQCMIDITDLPSVQVGDEVVIMGESDDKKFTADD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  I  R  + Y
Sbjct: 350 MAEIIGTINYEVICMISKRVPRVY 373


>gi|307267174|ref|ZP_07548681.1| alanine racemase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306917790|gb|EFN48057.1| alanine racemase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 384

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 96/379 (25%), Positives = 162/379 (42%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L  + +N   +    G   +   VVK NAYG G  ++A  L   GV    V 
Sbjct: 6   RPTRAEIYLDNIVHNLSEVKRWVGKKVKIMGVVKANAYGHGACQVAKVLIENGVSYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EE ++LR       I V+      Q K +   N+   +  +  +    ++    G   
Sbjct: 66  TIEEALELRECGINIPILVIGYTPLTQAKELIVHNITQTVFDINYVKDLERIALNVGKKA 125

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G   L+ A          +  ++  I SH A +D+ +      Q + 
Sbjct: 126 KVHVKIDTGMGRIGYTDLKVAEKEIEKMMEMEGVEVEGIFSHFATSDEKNKTYAEKQFDM 185

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQT 234
           F+ L+   K          +A+S  I+     +  + RPGI LYG     ++ +   ++ 
Sbjct: 186 FKKLLERLKEKGINIPLKHIANSGAIIDLKYTYLDMVRPGIVLYGSYPSEEVERPLDLKQ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++   G  +SYG      R S IA   +GYADG+   LS          
Sbjct: 246 TMGFKTKIVHIKEVPEGTSISYGRTFITKRKSKIATLPVGYADGFNRLLSNNH------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  +KG   P++G+I MD TM D+TD   +E+GD + IFG      I  +++A   
Sbjct: 299 ----HVLVKGKYAPVIGRICMDQTMIDVTDIEGVELGDDVVIFGNQEGEKITAEEIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   I  R  + Y
Sbjct: 355 NTIPYEVYCGISRRVPRIY 373


>gi|260893600|ref|YP_003239697.1| alanine racemase [Ammonifex degensii KC4]
 gi|260865741|gb|ACX52847.1| alanine racemase [Ammonifex degensii KC4]
          Length = 369

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 169/376 (44%), Gaps = 23/376 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            +  ++   AL++N   +  + G + R   +VK NAYG G   +A  L  AGV    V  
Sbjct: 4   PVWAEVSREALRHNLRVVKEIVGPSVRVMGIVKANAYGHGLVPVAKILEEAGVDWLGVAR 63

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHP 123
            +E ++LR       I VL  +HP +   +    +     S   L  ++ +    G    
Sbjct: 64  GQEALELRREGVDHPILVLGYVHPAECPALLAQEVTLTAYSEDILREWAGIAQREGKRLK 123

Query: 124 YALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +VDTG  RLG   + A  +           ++  I +H ACAD P       QLE+F
Sbjct: 124 VHFKVDTGMGRLGFKAEPAGKEAILRLAALPRVEVEGIYTHFACADLPDEKPTRDQLEKF 183

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             L+   +           A+S+ ++     H  + RPGI LYG     +    +   +T
Sbjct: 184 IMLLEELERAGLSIPLRHAANSAALIRFRESHLDMVRPGIMLYGLLPFPSARVNLSPAMT 243

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +AR++ +++  AG  VSYG   + +R SL+A  A GY DGY   LS             
Sbjct: 244 LKARVVQVKRVGAGFPVSYGWTYRTSRPSLLATVAAGYGDGYSRLLSN-----------K 292

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G+  ++G  VP++G++ MD  + D T+   +E G+ + +FG      + ++++A   GT 
Sbjct: 293 GEVLLRGRRVPVVGRVCMDQLIVDATELGEVEPGEEVVLFGRQGEVSLPVEELAEKIGTI 352

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 353 NYEVVCAVSARVPRVY 368


>gi|163749309|ref|ZP_02156558.1| alanine racemase [Shewanella benthica KT99]
 gi|161331028|gb|EDQ01954.1| alanine racemase [Shewanella benthica KT99]
          Length = 358

 Score =  313 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 182/370 (49%), Gaps = 21/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALK+N   +  ++ +++  AVVK N YG G   +A  + +     F V  
Sbjct: 3   PFPRAEISCKALKHNLARLRQIAPSSKIMAVVKANGYGHGLLNVAQCIED--ADGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR     A++ +L G   P     +   ++  V+ +  QL    +  S      
Sbjct: 61  LEEAIALRDGGVTAKLILLEGCFRPVDLITLVMNDIETVVHNETQLEMLEQ-ASLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++DTG +RLG + ++            ++ +   ++SH ACAD+P +     QL +F
Sbjct: 120 VWLKLDTGMHRLGFTPEQFEQIYARLQACPQVVKPIKLMSHFACADEPDNPYTQEQLNKF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L+ +  G + +LA+S+G L  P+ H    RPGI+LYG +     + K+H +Q  +   
Sbjct: 180 NKLVRNLPG-DTTLANSAGTLYWPDSHKDWVRPGIALYGVSPVTGDLGKNHGLQPAMELI 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R+  AGE V YG   +   D+ + + AIGY DGYP                G  
Sbjct: 239 SQLIAVREHKAGEPVGYGCYWRAKADTKLGIVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G +VPI+G+++MDM   D+    S  +GD   ++G  + ++ VA   GT  Y+L+ 
Sbjct: 288 VWVNGRLVPIVGRVSMDMLTVDLGSDSSDSIGDEAILWGSALPVEVVAEHIGTIAYELVT 347

Query: 360 RIGTRYAKFY 369
           ++  R A  Y
Sbjct: 348 KLTPRVA-VY 356


>gi|78042901|ref|YP_359522.1| alanine racemase [Carboxydothermus hydrogenoformans Z-2901]
 gi|85681910|sp|Q9F8I0|ALR_CARHZ RecName: Full=Alanine racemase
 gi|77995016|gb|ABB13915.1| alanine racemase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 368

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 170/378 (44%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +++L  +++N+  +  L+  A    V+K NAYG G  ++A AL   G + F V  
Sbjct: 2   RPVWAEVNLENIRHNFREVKRLARQAEAMPVIKANAYGHGAVEVAKALIAEGAKRFAVAI 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHP 123
           ++EG+KLR     A + +L    P + + +   NL P +      L +  +L     +  
Sbjct: 62  LDEGIKLREAGIDAPVLILGYTPPEEVEKLLFYNLTPTLHHRELALAYQERLERLKKTLF 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           Y L++DTG  R+G   +E           K  +   + +H A AD+     + +Q+ERF 
Sbjct: 122 YHLKIDTGMGRIGFWYEELEK-IEEVLKLKNLEAEGVYTHFARADEQDLSFSKLQIERFN 180

Query: 184 TLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            ++ H K           A+S+ I+  P  H+ L RPGI LYG     +       ++  
Sbjct: 181 IVLKHLKAKGIEVKYRHAANSAAIMRLPEAHYDLVRPGIMLYGEYPSRDVPRELAHLKPA 240

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +AR+  ++K  AG  VSYG     ++ +LI    +GYADGY   LS           
Sbjct: 241 LTLKARVSQVKKVPAGFTVSYGSTYVTSKATLIVSLPLGYADGYFRRLSNR--------- 291

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
             G   I G    I G++ MD  M  + ++  +  GD   + G      I   ++A   G
Sbjct: 292 --GVVLINGKRWSIAGRVCMDQLMVAVDETERVNPGDEAVLLGKQGEETITAMEMADLVG 349

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++L  I  R  + Y
Sbjct: 350 TINYEILTNISYRVPRIY 367


>gi|20808552|ref|NP_623723.1| alanine racemase [Thermoanaerobacter tengcongensis MB4]
 gi|23813661|sp|Q8R860|ALR2_THETN RecName: Full=Alanine racemase 2
 gi|20517179|gb|AAM25327.1| Alanine racemase [Thermoanaerobacter tengcongensis MB4]
          Length = 388

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R++++L ++ +N+  +  + G+  +   VVK NAYG G   +A AL   GV    V 
Sbjct: 6   RPTRVEVNLDSIVHNFREIKRVVGDRVKVMGVVKANAYGHGAYHVAKALVENGVDYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
           +VEE ++LR Y   A + +L      Q     + ++      +  +          G   
Sbjct: 66  TVEEALELRSYGITAPVLILGYTPLSQAGEAVEKDVTFTAFDLKYVKELGEIASRKGKKA 125

Query: 123 PYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G +  + A          +  +L  I SH A +D+        Q ER
Sbjct: 126 KIHVKIDTGMGRIGYTDFDLAEREIEEMSKLEGIELEGIFSHFATSDEKDKDYAREQFER 185

Query: 182 FRTLI----SHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDK--INKSHPMQT 234
           F  ++         I     ++SG +   NY +  + RPGI+LYG      +NK   ++ 
Sbjct: 186 FADMLKRLEKRGVNITLKHIANSGAITDLNYAYLDMVRPGITLYGSYPSNDVNKILDLRP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++      +SYG      R S IA   IGYADG    LS          
Sbjct: 246 AMNFKTKIVYIKEVPENTSISYGRTFITKRPSKIATLPIGYADGLNRLLSNNH------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               +  ++G  VPI+G++ MD TM D+T+   +EVGD + IFG      I  DD+A   
Sbjct: 299 ----EVLVRGKYVPIVGRVCMDQTMIDVTEVEGVEVGDEVVIFGEQEGKRITADDIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  +++   I  R  + Y
Sbjct: 355 RTIPHEVYCGISRRVPRIY 373


>gi|254479071|ref|ZP_05092425.1| alanine racemase [Carboxydibrachium pacificum DSM 12653]
 gi|214034987|gb|EEB75707.1| alanine racemase [Carboxydibrachium pacificum DSM 12653]
          Length = 388

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 167/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R++++L ++ +N+  +  + G+  +   VVK NAYG G   +A AL   GV    V 
Sbjct: 6   RPTRVEVNLDSIVHNFREIKRVVGDRVKVMGVVKANAYGHGAYHVAKALVENGVDYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
           +VEE ++LR Y   A + +L      Q     + ++      +  +          G   
Sbjct: 66  TVEEALELRSYGITAPVLILGYTPLSQAGEAVEKDVTFTAFDLKYVKELGEIASRKGKKA 125

Query: 123 PYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G +  + A          +  +L  I SH A +D+        Q ER
Sbjct: 126 KIHVKIDTGMGRIGYTDFDLAEREIEEMSKLEGIELEGIFSHFATSDEKDKDYAREQFER 185

Query: 182 FRTLI----SHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDK--INKSHPMQT 234
           F  ++         I     ++SG +   NY +  + RPGI+LYG      +NK   ++ 
Sbjct: 186 FADMLKRLEKRGVNITLKHIANSGAITDLNYAYLDMVRPGITLYGSYPSDDVNKILDLRP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++      +SYG      R S IA   IGYADG    LS          
Sbjct: 246 AMNFKTKIVYIKEVPENTSISYGRTFITKRPSKIATLPIGYADGLNRLLSNNH------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               +  ++G  VPI+G++ MD TM D+T+   +EVGD + IFG      I  DD+A   
Sbjct: 299 ----EVLVRGKYVPIVGRVCMDQTMIDVTEVEGVEVGDEVVIFGEQEGKRITADDIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  +++   I  R  + Y
Sbjct: 355 RTIPHEVYCGISRRVPRIY 373


>gi|296132181|ref|YP_003639428.1| alanine racemase [Thermincola sp. JR]
 gi|296030759|gb|ADG81527.1| alanine racemase [Thermincola potens JR]
          Length = 391

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 90/380 (23%), Positives = 149/380 (39%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDL A+ +N   +  ++   AR  AVVK NAYG G   ++      GV    V 
Sbjct: 22  RPAWAEIDLGAIAHNLREIRRITQPQARIMAVVKANAYGHGAVPVSQVALQNGVSYLGVA 81

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            ++E ++LR     A I +L      Q +     N+   I ++    F            
Sbjct: 82  MLDEALELRRAGIDAPILILGYTPKEQAEEAVRHNVTQTIYTLEMARFVSEVGEKLRQRA 141

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  RLG     E ++            +  I +H A +D         Q + 
Sbjct: 142 KVHIKIDTGMTRLGFLPGAETVEKIKEIAALPGLSVEGIFTHFAVSDIRDKAFTRQQFKL 201

Query: 182 FRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKS---HPMQ 233
           F  + +    +G++  +  ++     +  P  H  + R GISLYG             ++
Sbjct: 202 FTDMCAVLEREGVKIPIKHAANTGAIIDMPETHLDMVRLGISLYGLYPSPEVDRTKVSLK 261

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ +A I  +++   G  VSYG        ++IA   IGYADGY   LS         
Sbjct: 262 PALSLKAGISHLKEVPRGVTVSYGRTYTTQEKTMIATIPIGYADGYSRLLS--------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                   I+G   P+ G I MD  M D+     +   D + + G      I  D++A  
Sbjct: 313 --SKAHVLIRGTRAPVAGVICMDQFMVDVGHIPDVAATDEVVLIGRQGDDCISADELAQL 370

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++  +  R  + Y
Sbjct: 371 LGTINYEIVCMLSERIPRVY 390


>gi|168185661|ref|ZP_02620296.1| alanine racemase [Clostridium botulinum C str. Eklund]
 gi|169296525|gb|EDS78658.1| alanine racemase [Clostridium botulinum C str. Eklund]
          Length = 387

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 110/385 (28%), Positives = 168/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +I+L  L +N   +  LS       +VK +AYG G   I P L   G   
Sbjct: 1   MFKHLRPVWAEINLDNLASNMKEIKKLSNTKEIIGIVKADAYGHGALDIVPTLIENGATG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V  V EGV+LR    +  I VL    P    ++   ++   + S+      SK     
Sbjct: 61  LAVAVVSEGVELRRGGIECPIMVLGFTPPSLIDMLLKHDIEQTVFSLDYAKELSKAAEKM 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E++            ++  I SH + AD+ +   +S 
Sbjct: 121 HKIAKIHIAVDTGMGRIGFLPNEESIQDVKKISMLPNIKIKGIFSHFSTADEENKEYSSY 180

Query: 178 QLERFRTLI----SHYKGIE-ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           QL +F             IE   +++S+ I+  P   F+  RPGI LYG           
Sbjct: 181 QLNQFNKFYEGLKKENVNIETRHISNSAAIMDLPETKFEGVRPGIILYGYYPSNEVDKSK 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+  +  I+ I+K  +GE +SYG + K  R+S IA   +GYADGY   L G    
Sbjct: 241 LKLKPVMQLKTNIVHIKKIPSGEYISYGRKFKTDRESFIATLPVGYADGYTRLLFG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLD 344
                    K  I G + P++G+I MD  M DITD    I+VG+ + + G      I  D
Sbjct: 297 -------KAKVIINGQLAPVVGRICMDQCMVDITDIKGDIKVGEEVILIGQKNGIKIDAD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A   GT NY+++  I  R  + Y
Sbjct: 350 DIAEMLGTINYEIICMISKRVPRVY 374


>gi|301059502|ref|ZP_07200415.1| alanine racemase [delta proteobacterium NaphS2]
 gi|300446397|gb|EFK10249.1| alanine racemase [delta proteobacterium NaphS2]
          Length = 372

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 102/374 (27%), Positives = 168/374 (44%), Gaps = 20/374 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R  ++L A+++N  +     G N +  AVVK + YG G  +++    ++G     V 
Sbjct: 9   RSTRAVVNLGAVEHNIAAAREKIGKNRKLMAVVKADGYGHGALEVSTKALSSGADCLGVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE   LR     A I  L  I P +   + D  L   + S+      +    +  V  
Sbjct: 69  FPEEAEPLRKAGIDAPILALGLIQPDEAYKVIDLGLEQTVCSLELAEALNGAAGNASVKI 128

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VDTG  R+G+   + L++       K   L  I SH ACAD+  +   + Q+  F
Sbjct: 129 DVHIKVDTGMGRIGVLPHDLLEYCRKIRQLKHLNLKGIFSHFACADENDADFTNRQIRIF 188

Query: 183 RTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
              +           +  LA+S+GIL  P  H+ L RPGI +YG        +S  +   
Sbjct: 189 DQAVREMAASGISVPQKHLANSAGILAHPASHYDLVRPGIMIYGLYPSPEIARSVSLIPA 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +++I  +++      +SYG     +R ++IA   +GYADGY   LS           
Sbjct: 249 MTLKSKITQVKRVSRETPISYGRTYYTSRSAMIATLPVGYADGYNRRLSNRSF------- 301

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
                 I+G   P++G++ MDM MFD+T   ++  GD   +FG    +DD+A    T NY
Sbjct: 302 ----AIIRGERAPLVGRVCMDMCMFDVTAIKNVRPGDEAILFGESPTIDDIAKGLDTINY 357

Query: 356 DLLVRIGTRYAKFY 369
           +++  +G R  + Y
Sbjct: 358 EVVCAVGKRVPRIY 371


>gi|302392182|ref|YP_003828002.1| alanine racemase [Acetohalobium arabaticum DSM 5501]
 gi|302204259|gb|ADL12937.1| alanine racemase [Acetohalobium arabaticum DSM 5501]
          Length = 375

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 24/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N  + ++++L  ++ N   + A  S +    AVVK +AYG G   +A A   AG     V
Sbjct: 6   NRPVWVEVNLENIRFNLKQIRARVSADTLVMAVVKADAYGHGAVPVARAAVEAGADRLAV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
              EEGV+LR    +  I +L  + P Q  ++    LIP +S +       +        
Sbjct: 66  GLPEEGVQLRNAGFEVPIQILGEVLPEQIPLLAKYGLIPTVSKLETAVELERINAQLESR 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+VDTG  RLG+   E + F     +    +L  +++H A AD+        Q ++
Sbjct: 126 QKIHLKVDTGMGRLGVKPDEVVGFAQKLSSFPHLELEGLLTHFATADEADKEYTRQQWQK 185

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQT 234
           F   I   +           A+S+ I+  P     L R GI LYG         S  +++
Sbjct: 186 FNYAIECLEAAGIRIPVKHCANSAAIIDLPEMELDLVRAGIMLYGLRPSDEVGDSLQLKS 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  +ARI+ +++   G  +SYG        + IA   +GYADGY   LS          
Sbjct: 246 VLNWKARIVYLKEVDKGCGISYGATYTTADKAEIATIPLGYADGYFRALSN--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
              G   I G   PI G++ MD  M D+T+   + VGD + + G     ++   ++A   
Sbjct: 297 --KGDVLINGRRAPIRGRVCMDQFMVDVTEIPGVSVGDEVILIGKQDDKEVTAMELADLV 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY+++ +I  R  + Y
Sbjct: 355 GTINYEIISKITKRVPRIY 373


>gi|258516878|ref|YP_003193100.1| alanine racemase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780583|gb|ACV64477.1| alanine racemase [Desulfotomaculum acetoxidans DSM 771]
          Length = 373

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 165/378 (43%), Gaps = 26/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +I+L+A+ +N   +  ++   A+  AVVK +AYG G  + A    + GV    V+ V
Sbjct: 6   TWAEINLSAIAHNIQELRRIAAPGAQLMAVVKADAYGHGAVETARIALDNGVVILAVSRV 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
            EGV LR       + VL  + PG+       +L   + ++ Q    S +    G+    
Sbjct: 66  SEGVALREAGIDCPVLVLGYLSPGEVLFSLKNDLSHTVFNMQQAEILSDIATKAGIKAKV 125

Query: 125 ALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            ++++TG  RLG    +A ++           ++  I +H A +D         QL RF+
Sbjct: 126 HIKIETGMGRLGFEACQAVVEQVIAVTRLSHLKVDGIFTHFAVSDIIDKSYTRQQLFRFQ 185

Query: 184 TLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTV 235
            ++         +      +S+ I+  P+ H  + R GI++YG              Q  
Sbjct: 186 EVLRELHRKGVDIQLKHAANSAAIIDMPDTHLNMVRAGIAMYGLYPSEGVDKSRIVLQPA 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ + ++  I++  AG  VSYG      R +LIA   +GYADGY   LS           
Sbjct: 246 MSFKTQVGHIKRVPAGYPVSYGCTYITRRPTLIATLPVGYADGYSRLLSSR--------- 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  I G   P++G++ MD  M D+       +GD + ++G      + +++VA   G
Sbjct: 297 --AEVLIHGQRAPVVGRVCMDQCMIDVGHINDPLIGDEVVLWGQQGESSLPVEEVAEKMG 354

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+L+  +  R  + Y
Sbjct: 355 TINYELVCMVNVRVPRVY 372


>gi|170758199|ref|YP_001785612.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
 gi|169405188|gb|ACA53599.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
          Length = 404

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 101/388 (26%), Positives = 172/388 (44%), Gaps = 28/388 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++I+L  L +N   +  ++ +    +VVK +AYG G  +IA  L   G     V 
Sbjct: 5   SRPAWIEINLDNLIHNMKEIRRVARSKEIISVVKADAYGHGALEIASLLLENGANRLAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH--------PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            + E ++LR     A I +L                + I   +L   +SS       SK 
Sbjct: 65  VLSEALELRNNGITAPIIILGYTPLRYDEKTICNNAETIIKNDLEVSVSSYKYAEQLSKK 124

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               G      + +DTG  RLG    +E L+  +            + SH + AD+ +  
Sbjct: 125 AQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKLPNIIFEGLFSHFSTADEKNKD 184

Query: 174 VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
             + Q ++F       +          +A+S+ ++  P  H    RPGI+ YG       
Sbjct: 185 YTNEQFKKFLDFYYKLRDKNVKVNIKHIANSAALIDLPYTHLDAVRPGIAQYGYYPSSEV 244

Query: 228 --KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K   ++ ++T +  I+L++   +G+ +SYG + +  R+S IAV  IGYADGY   LS 
Sbjct: 245 NHKDINLRPIMTLKTNIVLVKDIKSGQSISYGRKFRTIRNSKIAVLPIGYADGYERELSN 304

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDI 341
            ++ +        +  + G   PI+G+ITMDM M D+TD   ++VGD + + G      I
Sbjct: 305 ENNVY------KAQVIVNGRRAPIVGRITMDMCMIDVTDIGDVKVGDEVILIGECNDERI 358

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++D+A    T  Y++  RI  R  ++Y
Sbjct: 359 SVEDIADLLNTIPYEVTSRISKRIPRYY 386


>gi|310829658|ref|YP_003962015.1| alanine racemase [Eubacterium limosum KIST612]
 gi|308741392|gb|ADO39052.1| alanine racemase [Eubacterium limosum KIST612]
          Length = 399

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 166/378 (43%), Gaps = 22/378 (5%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++     +I L  L  N   +   +   AR   VVK +AYG G   +A  L + GV    
Sbjct: 12  AHRPTWAEIKLENLLFNLEQIKKAAGPEARIMGVVKADAYGHG-VDVAELLQDEGVPCLG 70

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCG 119
           V  ++E + LR          + G     +        +       +         ++ G
Sbjct: 71  VAFLDEAIALRQKGIDRCDLFILGYTGADQIPELVEWDVTPGVYQLEFAQALSDYCVANG 130

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
             HP  ++VDTG  R+G    EA +      +    ++  + +H A AD+       +QL
Sbjct: 131 SVHPVHIKVDTGMGRIGFRWDEAAEAVLKIADMPGIRIEGLYTHFATADEVDKDFTHLQL 190

Query: 180 ERFRTLISH--YKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
            R+  ++     KG+E  L    +S+ I+      F + RPGI LYG         +   
Sbjct: 191 TRYAQVVKALSDKGVEIPLKHVENSAAIIDFDKTVFNMVRPGIILYGHYPSDEVKKEKLG 250

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V++ + RI+ I+   AG+ VSYG +     D +IA   +GYADGY   LSG      
Sbjct: 251 LKPVMSFKTRIVHIKTIHAGDTVSYGRKFTAEGDRVIATLPVGYADGYSRMLSGK----- 305

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                G +  + G+  P++G I MD  M DIT    + + D +++FG ++ ++++A   G
Sbjct: 306 -----GAEVLVNGHRAPVVGNICMDQCMVDITGLEGVSLYDEVELFGENLPVEELAEKLG 360

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+LL  +  R  + Y
Sbjct: 361 TISYELLCMVNKRVPRVY 378


>gi|323706388|ref|ZP_08117952.1| alanine racemase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534282|gb|EGB24069.1| alanine racemase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 388

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++L  + +N+  +  ++  NA   AVVK NAYG G  +++  L N GV    V 
Sbjct: 6   RPTWAEVNLDNIIHNYKEIRKITDKNAGIMAVVKANAYGHGSYEVSKELINCGVDYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           +++E ++LR       I +L         +I   ++      +  +   +K+    G   
Sbjct: 66  TIDEALELREQGISKPILILGYTPAKFADVIVKHDITQTAFELSYVKEVAKVAQKLGKDA 125

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G + + +A +      N     +  I SH + +D+        QLE 
Sbjct: 126 KIHVKIDTGMGRIGYNDMNKAYEEILTMSNLAGINIEGIFSHFSSSDEKDKEYTLRQLEI 185

Query: 182 FRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQT 234
           F  LI   K          +A+S+ IL  P  H  + RPGI LYG     ++NK   +  
Sbjct: 186 FLNLIERLKKSGLYIPIRHIANSAAILDMPETHLDMVRPGIILYGSFPSSEVNKKIDLLP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ++++ ++    GE +SY    +  R S IA   IGYADG    LS   +      
Sbjct: 246 TISLRSKVVYVKDVGEGEYISYNRTYRTNRKSRIATLPIGYADGLNRLLSNNHN------ 299

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  I G   PI+GKI MD  M D+T+   ++ GD   I G      I  D++A   
Sbjct: 300 -----VIINGKYAPIVGKICMDQCMVDVTEIEDVKEGDVATIMGEADGKFISADEIANKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++   I  R  + Y
Sbjct: 355 KTISYEVYCGISRRVPRIY 373


>gi|148378278|ref|YP_001252819.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|153930927|ref|YP_001382679.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|153935439|ref|YP_001386230.1| alanine racemase [Clostridium botulinum A str. Hall]
 gi|148287762|emb|CAL81828.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|152926971|gb|ABS32471.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|152931353|gb|ABS36852.1| alanine racemase [Clostridium botulinum A str. Hall]
          Length = 404

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 101/388 (26%), Positives = 172/388 (44%), Gaps = 28/388 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++I+L  L +N   +  ++ +    +VVK +AYG G  +IA  L   G     V 
Sbjct: 5   SRPAWIEINLDNLIHNMKEIRRVARSKEIISVVKADAYGHGALEIASLLLENGANRLAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH--------PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            + E ++LR     A I +L                + I   +L   +SS       SK 
Sbjct: 65  VLSEALELRNSGITAPIIILGYTPLRYDERTICNNAETIIKNDLEVSVSSYKYAEQLSKK 124

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               G      + +DTG  RLG    +E L+  +            + SH + AD+ +  
Sbjct: 125 AQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKLPNIIFEGLFSHFSTADEKNKE 184

Query: 174 VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
             + Q ++F       +          +A+S+ ++  P  H    RPGI+ YG       
Sbjct: 185 YTNEQFKKFLDFYYKLRDKNVKVNIKHIANSAALIDLPYTHLDAVRPGIAQYGYYPSSEV 244

Query: 228 --KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K   ++ ++T +  I+L++   +G+ +SYG + +  R+S IAV  IGYADGY   LS 
Sbjct: 245 NHKDINLRPIMTLKTNIVLVKDIKSGQSISYGRKFRTIRNSKIAVLPIGYADGYERELSN 304

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDI 341
            ++ +        +  + G   PI+G+ITMDM M D+TD   ++VGD + + G      I
Sbjct: 305 ENNVY------KAQVIVNGRRAPIVGRITMDMCMIDVTDIGDVKVGDEVILIGECNDERI 358

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++D+A    T  Y++  RI  R  ++Y
Sbjct: 359 SVEDIANLLNTIPYEVTSRISKRIPRYY 386


>gi|183597310|ref|ZP_02958803.1| hypothetical protein PROSTU_00561 [Providencia stuartii ATCC 25827]
 gi|188023331|gb|EDU61371.1| hypothetical protein PROSTU_00561 [Providencia stuartii ATCC 25827]
          Length = 360

 Score =  310 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+ ++R  A+VK NAYG G  +++  L +  V  F V  ++E + 
Sbjct: 8   INRRALRHNLQRVRELAPHSRLIAIVKANAYGHGLTEVSTTLEDL-VDGFGVARLKEALA 66

Query: 71  LRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR     A I +L G        ++ +  +  VI  V QL                +++D
Sbjct: 67  LRERGITAPIVLLEGFFEHSDLPLLVEHQIDTVIHCVEQLAMLEATELAN-PIKVWMKLD 125

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           TG +RLG+  Q+A  F       K +     IISH   AD+P     + Q+  F+  +++
Sbjct: 126 TGMHRLGVLPQDAEAFYQRLQACKNVKHPINIISHFCQADEPELPTTANQIHCFKQFVAN 185

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIILI 245
             G E S+A+S+GILL P+ H+   RPGI +YG + +     +   +Q+V+T ++ +I +
Sbjct: 186 KAG-EKSIAASAGILLWPDAHYDWVRPGIIMYGASPQEGTSAEHFGLQSVMTLKSTLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AG+ V YG      RD+ + V AIGY DGYP +              G    + G 
Sbjct: 245 REHAAGQCVGYGATWCSQRDTRLGVVAIGYGDGYPRSA-----------PSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G+++MDM   D+  + + +VGD + ++G  + ++++A  +G  NY+LL ++ +R 
Sbjct: 294 KVPIVGRVSMDMITVDLGPNANDKVGDEVILWGKSLPVEEIAAQTGIINYELLTKLTSRV 353

Query: 366 AKFY 369
              Y
Sbjct: 354 VMEY 357


>gi|297545238|ref|YP_003677540.1| alanine racemase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296843013|gb|ADH61529.1| alanine racemase [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 385

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 157/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L  + +N   +    G   +   VVK NAYG G   +A  L   GV    V 
Sbjct: 6   RPTRAEIYLDNIAHNLSEVKRWVGKKVKIMGVVKANAYGHGACHVAKVLVENGVCYLGVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EE ++LR       I V       Q + +   N+   +  +  +    K+    G   
Sbjct: 66  TIEEALELRECGINIPILVFGYTPLTQAEELIVHNITQTVFDINYVEDLEKIALNVGKKA 125

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G   L+ A          +  ++  I SH A +D+        Q + 
Sbjct: 126 KVHVKIDTGMGRIGYTDLKVAEKEIEKMMEMEGVEVEGIFSHFATSDEKDKSYAEQQFDM 185

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQT 234
           F+ L+   K          +A+S  I+     +  + RPGI LYG         P  ++ 
Sbjct: 186 FKKLLERLKEKRINIPLKHMANSGAIIDLKYTYLDMVRPGIVLYGSYPSEEVKRPLDLRQ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++   G  +SYG      R S IA   +GYADG+   LS          
Sbjct: 246 TMGFKTKIVYIKEVPEGTSISYGKTFITKRKSKIATLPVGYADGFNRLLSNNY------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  +KG    ++G+I MD TM D+TD   +EVGD + IFG      I  +++A   
Sbjct: 299 ----HVLVKGKYAAVVGRICMDQTMIDVTDIEGVEVGDDVIIFGNQEGEKITAEEIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   I +R  + Y
Sbjct: 355 NTIPYEVYCGISSRVPRIY 373


>gi|147676995|ref|YP_001211210.1| alanine racemase [Pelotomaculum thermopropionicum SI]
 gi|254802371|sp|A5D4I1|ALR_PELTS RecName: Full=Alanine racemase
 gi|146273092|dbj|BAF58841.1| alanine racemase [Pelotomaculum thermopropionicum SI]
          Length = 374

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            +  +I+L A+ +N   +  ++   A+  AVVK NAYG G E+++      G +   V  
Sbjct: 5   PVWAEINLRAIAHNIREIRRVTEPGAKVMAVVKANAYGHGAEEVSQTALAGGAEWLGVAR 64

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHP 123
           V EGV LR    +A + VL    P Q   +   NL   + +    L         G    
Sbjct: 65  VAEGVSLRQAGIEAPVLVLGYTTPEQAADVIRHNLSQTVYTRNAALFLAEAAAREGKRAR 124

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +VDTG  R+G      A+            ++  I +H A AD         Q ++F
Sbjct: 125 VHFKVDTGMGRIGWLAGPGAVREILELARLPQLEVEGIFTHFAAADAADKRYTLEQFQKF 184

Query: 183 RTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QT 234
             +I      G+E  L    +S+ I+  P  H  + R GI LYG              + 
Sbjct: 185 IEMIDELQKNGLEFPLRHAANSAAIMELPGTHLDMVRAGIILYGLYPSDEVDRRRIDLRP 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++ +AR+  +++  AG  VSYG      R  +IA   +GYADGY   LS          
Sbjct: 245 AMSLKARVAHVKEVPAGFKVSYGCTYTTGRPGVIATLPLGYADGYSRLLS---------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G+  I G   P++G++ MD  M D++    ++ GD   + G      I  D+VA   
Sbjct: 295 -SKGEALIHGRRAPVVGRVCMDQVMVDVSGIPGVKAGDEAVLIGRQGGETISADEVAAKL 353

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++   +  R  + Y
Sbjct: 354 GTINYEVTCMVSGRVPRVY 372


>gi|323140360|ref|ZP_08075291.1| alanine racemase [Phascolarctobacterium sp. YIT 12067]
 gi|322415164|gb|EFY05952.1| alanine racemase [Phascolarctobacterium sp. YIT 12067]
          Length = 372

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 21/379 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           MH       +I+L A+ +N     A L    +  AVVK +AYG G  ++A      G   
Sbjct: 1   MHIQRGAWAEINLDAVAHNVQMAKANLKPTTKLCAVVKADAYGHGAVRVAQEAARNGADF 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSC 118
           F V  ++EGVKLR    +  I VL  + P   +I    ++   +          +  +  
Sbjct: 61  FAVALLQEGVKLREAGIETPILVLGSMLPEVAEICVRYDISHAVFDEERLYALNAAALKL 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  +++DTG +R+G+ +++A  F   + +     +  + SH A AD       + Q
Sbjct: 121 HTKAKIHIKIDTGMHRIGVHVRDAGRFAKLAASLPGIYIEGVFSHFATADADDKQYAAYQ 180

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
            ERF+  +              +A+S+ +     Y   + R GI+LYG      I+    
Sbjct: 181 FERFQEALRLIEAEGVHIPIRHIANSAALTELQEYQLDMVRQGITLYGLHPAHMIDCYKD 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            + V+T + ++  ++    GE + YG    LTR S+IA   IGYADG    LS       
Sbjct: 241 FEPVMTVKTQVAFVKTLPPGETIGYGRTYTLTRPSVIATVPIGYADGVSRRLSNR----- 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVALAS 350
                 G   + G   PI+G++ MD TM D+TD   +++G  + +F G ++ ++ VA  +
Sbjct: 296 ------GYMLVNGKKAPIIGRVCMDQTMLDVTDIPDVKLGSEVIVFGGRELPMELVAEWA 349

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y+++  +  R  + Y
Sbjct: 350 DTICYEIVCDVSPRVPREY 368


>gi|289579033|ref|YP_003477660.1| alanine racemase [Thermoanaerobacter italicus Ab9]
 gi|289528746|gb|ADD03098.1| alanine racemase [Thermoanaerobacter italicus Ab9]
          Length = 385

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 157/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L  + +N   +    G   +   VVK NAYG G   +A  L   GV    V 
Sbjct: 6   RPTRAEIYLDNIVHNLSEVKRWVGKKVKIMGVVKANAYGHGACHVAKVLVENGVCYLGVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EE ++LR       I V       Q + +   N+   +  +  +    K+    G   
Sbjct: 66  TIEEALELRECGINIPILVFGYTPLTQAEELIVHNITQTVFDINYVEDLEKIALKVGKKA 125

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G   L+ A          +  ++  I SH A +D+        Q + 
Sbjct: 126 KVHVKIDTGMGRIGYTDLKVAEKEIEKMMEMEGVEVEGIFSHFATSDEKDKSYAEQQFDM 185

Query: 182 FRTLI----SHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKINKSHPMQ--T 234
           F+ L+         I     ++SG ++   Y +  + RPGI LYG         P+    
Sbjct: 186 FKKLLERLKEKGINIPLKHMANSGAIIDLKYTYLDMVRPGIVLYGSYPSEEVKRPLDLKQ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  + +I+ I++   G  +SYG      R S IA   +GYADG+   LS          
Sbjct: 246 TMGFKTKIVYIKEVPEGTSISYGKTFITKRKSKIATLPVGYADGFNRLLSNNY------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  +KG    ++G+I MD TM D+TD   +EVGD + IFG      I  +++A   
Sbjct: 299 ----HVLVKGKYAAVVGRICMDQTMIDVTDIEGVEVGDDVIIFGNQEGEKITAEEIAKKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   I +R  + Y
Sbjct: 355 NTIPYEVYCGISSRVPRIY 373


>gi|326792091|ref|YP_004309912.1| alanine racemase [Clostridium lentocellum DSM 5427]
 gi|326542855|gb|ADZ84714.1| alanine racemase [Clostridium lentocellum DSM 5427]
          Length = 377

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSNEF-LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S+   +  +++L A+++N+  +     N     A+VK + YG G +++A  L   GV 
Sbjct: 1   MESHRPRVVAEVNLGAIEHNYKQIRQHIPNHTEIMAIVKADGYGHGAKEVANFLQEQGVN 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F V  V EG +LR     + I VL        K + + +L   + S       S     
Sbjct: 61  RFAVAIVAEGEELRSSGITSPILVLGYTPRADIKTLIENDLTQTVFSYEMAKTISDEAGR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    L+VDTG  R+G     ++++            L  I +H + AD+  +    
Sbjct: 121 LGKTVNIHLKVDTGMGRIGFLSSPKSIEEILMITKLPHINLEGIFTHFSTADEEDTSYTK 180

Query: 177 VQLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKI---NK 228
            Q   F   +     +   L      +S+ I+     H  L RPGI LYG         K
Sbjct: 181 EQWSIFEGFLKELSEVGLELPIIHAANSAAIMCHEYTHLNLVRPGIILYGYYPSPYLGGK 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +T + +++ +++   G+ V YG +    + + IA   +GYADGY   L     
Sbjct: 241 VLDLEPAMTLKTQVVHVKELPEGQYVGYGRKFYTHQKTKIATIPVGYADGYSRNLGN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G+  I+G   PI+G I MD  M D+T    + V D + +FG      I ++
Sbjct: 298 --------KGRVLIRGQYAPIIGNICMDQFMVDVTHIKGVSVEDEVVLFGKQQDAVIPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A + GT NY+++  IG R  + Y
Sbjct: 350 EIAQSLGTINYEIVCMIGKRVPRIY 374


>gi|59710909|ref|YP_203685.1| alanine racemase [Vibrio fischeri ES114]
 gi|59479010|gb|AAW84797.1| alanine racemase 1, PLP-binding, biosynthetic [Vibrio fischeri
           ES114]
          Length = 360

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 110/374 (29%), Positives = 172/374 (45%), Gaps = 18/374 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +    +ID++AL +N   +   + +++  AVVK N YG G   IA      G   F
Sbjct: 1   MSYMKAATAQIDMSALAHNLQKIKQQAPSSKLLAVVKANGYGHGLLNIAKGAQ--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  I  TN I       +     +      
Sbjct: 59  GVARIEEALQLRAGGIVKPILLLEGFYSAGDLPILVTNNIQTAIHCKEQLEALESTDLEF 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VD+G +RLG+  +E  ++       K + +    +SH  CAD+  S   + Q+
Sbjct: 119 PVVAWLKVDSGMHRLGIRPEEFQEYVDRLHACKNVAKPLRYMSHFGCADELDSSTTTEQI 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
           + F +L    +G E SLA+S+G+L  P+      RPGI +YG +    +S         +
Sbjct: 179 DTFMSLTKGCQG-ERSLAASAGLLAWPDSRLDWVRPGIIMYGVSPFAEQSAQELGYLPTM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I +R   AGE V YG      RD+ I V AIGY DGYP T              
Sbjct: 238 TLTSHLIAVRDVKAGESVGYGAIWTSERDTKIGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VPI G+++MDM   D+      +VGD   ++G D+  ++VA   GT  Y+
Sbjct: 287 GTPVLVNGRKVPIAGRVSMDMLTVDLGPDAQDKVGDEAILWGRDLPSEEVAEHIGTIAYE 346

Query: 357 LLVRIGTRYAKFYT 370
           L+ ++ +R    YT
Sbjct: 347 LVTKLTSRVQMQYT 360


>gi|45359075|ref|NP_988632.1| alanine racemase [Methanococcus maripaludis S2]
 gi|45047950|emb|CAF31068.1| Alanine racemase [Methanococcus maripaludis S2]
          Length = 373

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 170/384 (44%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S+  +  +IDL+A+KNN   +  ++   ++  AVVK NAYG G  +++      G   
Sbjct: 1   MVSH-PIWAEIDLSAIKNNIKEIRRITNPKSQVMAVVKANAYGHGSVEVSKICLENGADR 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
             V    E ++LR       I V   +   +   + + ++   + S+       K+    
Sbjct: 60  LAVARSTEALELRDAGITCPILVFGYVTEEEILKMVENDITLTVYSLEIANSIQKIAEKL 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      ++VDTG +RLG   ++ +++        +  ++  I +H A AD+      ++
Sbjct: 120 GKHSKIHIKVDTGMSRLGFLPEKSSVETIKKIRELENIEVEGIYTHFADADNSDKTYTTM 179

Query: 178 QLERFRTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKI---NKS 229
           Q  +F + +      GI+  +    +S+ I+  P  H  + RPGI LYG         + 
Sbjct: 180 QFSKFTSFLHDLEENGIDIPIKHASNSAAIIDHPETHLNMVRPGIILYGLYPSELVHKER 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +Q  ++ +  +  ++       +SYG   +  + S IA   IGYADG+   L      
Sbjct: 240 INLQPAMSLKVLVTHVKDVPENTKISYGCTFETKKQSKIASLPIGYADGFTRMLRN---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G   I G  VP++G+I MD  M D+T   ++ VGD + +FG D    I +++
Sbjct: 296 --------GNVLIHGLRVPVVGRICMDQCMIDVTSIENVNVGDVVTVFGKDGTEKISIEE 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
                GT NY+L+  +  R  + Y
Sbjct: 348 FGNKLGTINYELVCMVSARVPRIY 371


>gi|229525066|ref|ZP_04414471.1| alanine racemase biosynthetic [Vibrio cholerae bv. albensis VL426]
 gi|229338647|gb|EEO03664.1| alanine racemase biosynthetic [Vibrio cholerae bv. albensis VL426]
          Length = 375

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 177/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF         + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYQDFVTRLHQCANVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 357 ELVTKLTSRVEMSYS 371


>gi|170757299|ref|YP_001779928.1| alanine racemase [Clostridium botulinum B1 str. Okra]
 gi|169122511|gb|ACA46347.1| alanine racemase [Clostridium botulinum B1 str. Okra]
          Length = 404

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 28/388 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++I+L  L +N   +  ++ +    +VVK +AYG G  +IA  L   G     V 
Sbjct: 5   SRPAWIEINLDNLIHNMKEIRRVARSKEIISVVKADAYGHGALEIASLLLENGANRLAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH--------PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            + E ++LR     A I +L                + I   +L   +SS       SK 
Sbjct: 65  VLSEALELRNSGITAPIIILGYTPLRYDERTICNNAETIIKNDLEVSVSSYKYAEQLSKK 124

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               G      + +DTG  RLG    +E L+  +            + SH +  D+ +  
Sbjct: 125 AQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKLPNIIFEGLFSHFSTVDEKNKD 184

Query: 174 VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
             + Q ++F       +          +A+S+ ++  P  H    RPGI+ YG       
Sbjct: 185 YTNEQFKKFLDFYYKLRDKNVKVNIKHIANSAALIDLPYTHLDAVRPGIAQYGYYPSSEV 244

Query: 228 --KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K   ++ ++T +  I+L++   +G+ +SYG + +  R+S IAV  IGYADGY   LS 
Sbjct: 245 NHKDINLRPIMTLKTNIVLVKDIKSGQSISYGRKFRTIRNSKIAVLPIGYADGYERELSN 304

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDI 341
            ++ +        +  + G   PI+G+ITMDM M D+TD   ++VGD + + G      I
Sbjct: 305 ENNVY------KAQVIVNGRRAPIVGRITMDMCMIDVTDIGDVKVGDEVILIGECNDERI 358

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++D+A    T  Y++  RI  R  ++Y
Sbjct: 359 SVEDIADLLNTIPYEVTSRISKRIPRYY 386


>gi|304316039|ref|YP_003851184.1| alanine racemase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777541|gb|ADL68100.1| alanine racemase [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 388

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 163/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++L  + +N+  +  ++   A   AVVK NAYG G  +I+  L   GV    V 
Sbjct: 6   RPTWAEVNLNNIIHNYKEIRKITDKKAGIMAVVKANAYGHGSYEISKELIKCGVDYLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           +++E ++LR +     I VL         +I   ++      +  +   SK     G   
Sbjct: 66  TIDEALELREHGISKPILVLGYTPSKFADVIVKYDITQTAFELGYVKEISKEAIKQGKDA 125

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G + + +A +      + K   +  I SH + +D+        Q + 
Sbjct: 126 KIHVKIDTGMGRIGYNDMNKAYEEIVAMTSLKGIYIEGIFSHFSSSDERDKEYTMRQFKI 185

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQT 234
           F  L               +A+S+ IL  P  H  + RPGI LYG     +++K   ++ 
Sbjct: 186 FNDLTDRLKRSGIDIPIRHIANSAAILDLPETHLDMVRPGIILYGSYPSEEVDKKISLKC 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ++I+ I+    GE +SY    K +R S IA   IGYADG    LS   S      
Sbjct: 246 TISLRSKIVYIKDVPEGEYISYNRTYKTSRKSRIATLPIGYADGLNRLLSNNHS------ 299

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                  IKG   PI+GKI MD  M D+T    ++ GD   I G      +  D++A   
Sbjct: 300 -----VIIKGKYAPIVGKICMDQCMVDVTSIEGVKEGDVATIMGESDGKIVSADEIANKL 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++   I  R  + Y
Sbjct: 355 KTISYEVYCGISRRVPRIY 373


>gi|261254033|ref|ZP_05946606.1| alanine racemase biosynthetic [Vibrio orientalis CIP 102891]
 gi|260937424|gb|EEX93413.1| alanine racemase biosynthetic [Vibrio orientalis CIP 102891]
          Length = 358

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 174/364 (47%), Gaps = 18/364 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L AL++N   +   + N++  AVVK N+YG G   IA      G   F V  +EE ++
Sbjct: 8   INLEALQHNLELIKQQAPNSKVMAVVKANSYGHGLRHIAKHAQ--GADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G +   +  +  TN I  +    +     +           L++D+
Sbjct: 66  LRACGVVKPILLLEGFYSQGDLPVLVTNNIQTVVHCEEQLQALEQAELETPVVVWLKIDS 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++  +F       + + +    +SH  CAD+      + Q E F +L    
Sbjct: 126 GMHRLGVRPEQYSEFVTRLKACRNVAKPLRYMSHFGCADELDKSTTNQQTELFLSLTEGC 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIR 246
           +G E SLA+S+G+L  P+   +  RPGI +YG +   ++S      Q V+T ++ +I +R
Sbjct: 186 EG-ERSLAASAGLLAWPDSQLEWVRPGIIMYGVSPFNDRSAQELGYQPVMTLKSHLIAVR 244

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YGG     RD+ + V AIGY DGYP T              G    + G  
Sbjct: 245 DVKAGESVGYGGMWTSQRDTKVGVIAIGYGDGYPRTAPN-----------GTPVLVNGRK 293

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            PI G+++MDM   D+    S +VGD   ++G  +  ++VA   GT  Y+L+ ++ +R  
Sbjct: 294 APIAGRVSMDMLTVDLGPDASDKVGDEAILWGNQLPAEEVASHIGTIAYELVTKLTSRVD 353

Query: 367 KFYT 370
             Y+
Sbjct: 354 MEYS 357


>gi|150399575|ref|YP_001323342.1| alanine racemase [Methanococcus vannielii SB]
 gi|150012278|gb|ABR54730.1| alanine racemase [Methanococcus vannielii SB]
          Length = 380

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 165/391 (42%), Gaps = 35/391 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S+  +  +IDL A+KNN   +  ++  +++  AVVK NAYG G  +I+  +   G   
Sbjct: 1   MISH-PIWAEIDLNAVKNNIKEIRRITNSDSQIMAVVKANAYGHGAVEISKVVLKNGADR 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--- 116
             V   +E ++LR    +  I V       +   +   ++I  + S+       K+    
Sbjct: 60  LAVARSKEAIELRNAGFKCPILVFGYNTIEEILELIKNDVILTVYSIEIAKDIQKIAKDI 119

Query: 117 -----SCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDP 170
                         L++DTG NRLG     + ++           ++  I +H A AD+ 
Sbjct: 120 QKIAKDIQKIAKVHLKIDTGMNRLGFIPDKKTINEILKISEFLNIEIEGIYTHFADADNS 179

Query: 171 SSHVNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
                  Q  +F   +     S        +++S+ I+  P  H  + RPGI LYG    
Sbjct: 180 DKTYTKKQFSKFMEFLTDLEDSGINIPIKHVSNSAAIIDHPETHLNMVRPGIILYGLYPS 239

Query: 226 I---NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT 282
                    ++ V++ +  I  ++    G  +SYG      + S IA   +GYADG+   
Sbjct: 240 ELVQKDKINLEPVMSLKCLITHVKDVPRGTKISYGCTYITKKKSKIASIPLGYADGFTRM 299

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-- 340
           L              GK  + G   PI+G+I MD  M D+++   +++GD + +FG    
Sbjct: 300 LKN------------GKVLVGGKRAPIVGRICMDQCMADVSNIDDVKIGDTVLVFGKHEK 347

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             + +++++    T NY+L+  I  R  + Y
Sbjct: 348 YTVPVEEISNELKTINYELVCMISNRVPRVY 378


>gi|312793010|ref|YP_004025933.1| alanine racemase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180150|gb|ADQ40320.1| alanine racemase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 390

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL  L  N  ++        R  AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEIDLDNLVYNLENIKKKILPQTRIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + S+     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSQAAQKIGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLE 180
              ++VDTG  R+G     E++    N       +L  I SH + ADDP   H    Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCNESIQTVLNIAKLPNIELEGIFSHFSSADDPDSDHFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPSSSLKEHLSIK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGRQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEVVCSFSKRIPRVY 376


>gi|331268600|ref|YP_004395092.1| alanine racemase [Clostridium botulinum BKT015925]
 gi|329125150|gb|AEB75095.1| alanine racemase [Clostridium botulinum BKT015925]
          Length = 387

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 104/385 (27%), Positives = 165/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +I+L  L  N   +  +S +     +VK +AYG G   +AP L   G   
Sbjct: 1   MFKHLRPVWAEINLDNLAFNVKEIKKISSSKEIIGIVKADAYGHGALDVAPTLIENGATG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V  + EGV+LR    +  I VL    P     +   ++   + S+      S +    
Sbjct: 61  LAVAVINEGVELRRGGIECPIMVLGFTAPTLIDTLLRHDIEQTVFSLEYAKQLSGVAEKM 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G     E++       N    ++  I +H + AD+ +      
Sbjct: 121 HKKIKIHIAVDTGMGRIGFLPNKESVQDVKKISNLPNVEIKGIFTHFSTADESNKEYTYY 180

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           QL++F       K          +A+S+ I+      F+  RPGI LYG           
Sbjct: 181 QLKKFNEFYDELKKENINIQTRHIANSAAIMELSETQFEGVRPGIILYGYYPSNQVDKSK 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+  +  I+ I+K  +G+ +SYG + K  R+S+IA   +GYADGY   L      
Sbjct: 241 LKLKPVMELKTNIVHIKKISSGKYISYGRKFKTERESIIATLPVGYADGYTRLLFN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD----IKLD 344
                    K  I G   PI+G+I MD  M DITD    I++GD + + G +    I  D
Sbjct: 297 -------KAKVIINGQFAPIIGRICMDQCMVDITDIKGDIKIGDEVILMGQENGIKIDAD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A   GT NY+++  I  R  + Y
Sbjct: 350 DIASMLGTINYEVVCMISKRVPRVY 374


>gi|77919828|ref|YP_357643.1| alanine racemase [Pelobacter carbinolicus DSM 2380]
 gi|77545911|gb|ABA89473.1| alanine racemase [Pelobacter carbinolicus DSM 2380]
          Length = 378

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/379 (31%), Positives = 184/379 (48%), Gaps = 24/379 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            ++   R++IDL ALK+N++    L+G  +   AVVK +AYG G   +A AL   GV+ F
Sbjct: 5   RAHRPTRVEIDLEALKHNFYQAQRLAGPGQGVLAVVKADAYGHGAAHVAMALQGVGVEMF 64

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CG 119
            V  VEEGV LR       I VL G++PGQE+ +    L+P +  +             G
Sbjct: 65  GVAIVEEGVALREAGVVCPILVLGGLYPGQEENLLRYGLVPTLFDMDVARRLDSCARAAG 124

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           V  PY ++VDTG +R+G    +              ++  + SHLA AD+P + VN  QL
Sbjct: 125 VVLPYHMKVDTGMSRVGFRPDDLPRVLEELGALSGLRMDGLFSHLAMADEPENTVNQKQL 184

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPM 232
           E FR  +     + +      L++S+ +L        L+RPGI LYG       +    +
Sbjct: 185 EIFRGCLDRVRQAGFAPRYVHLSNSAALLTREVPECNLSRPGILLYGALPSPAFAGRFDL 244

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++   RI  IRK   G  VSYG +    R +++AV  +GYADGY   LS +      
Sbjct: 245 KPVMSFRTRIAQIRKVPEGTGVSYGHRFVAERPTVLAVIPVGYADGYSRQLSNV------ 298

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                G+  ++G    + G + MD TM D+TD   + VGD + + G D    I  D+ A 
Sbjct: 299 -----GEMLVRGQRARVAGTVCMDWTMIDVTDIPDVAVGDEVTLLGCDNGQCITADEWAE 353

Query: 349 ASGTTNYDLLVRIGTRYAK 367
             GT +Y++  +   R  +
Sbjct: 354 RIGTISYEVFCQFSKRVPR 372


>gi|153939434|ref|YP_001392754.1| alanine racemase [Clostridium botulinum F str. Langeland]
 gi|152935330|gb|ABS40828.1| alanine racemase [Clostridium botulinum F str. Langeland]
 gi|295320733|gb|ADG01111.1| alanine racemase [Clostridium botulinum F str. 230613]
          Length = 386

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  ++AP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGAMEVAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKESIMILGYTPGALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIKIEGLFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNEFINKLEEKNIQVPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRDN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTERESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|269964436|ref|ZP_06178677.1| alanine racemase [Vibrio alginolyticus 40B]
 gi|269830774|gb|EEZ84992.1| alanine racemase [Vibrio alginolyticus 40B]
          Length = 366

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 6   MSYMKAAKACIDLSALQHNLQRVKAQAPQSKVMAVVKANGYGHGLRHVAKHA--NHADAF 63

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 64  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLE 122

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  +F                +SH  CAD+  S +   Q
Sbjct: 123 TPVVVWLKIDSGMHRLGVRPEQYDEFVTRLKECPNVAKPLRYMSHFGCADELDSDITPQQ 182

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
           +ERF++L S  +G E SLA+S+G+L  P  H    RPGI +YG +   +K       Q V
Sbjct: 183 IERFKSLTSGCQG-ERSLAASAGLLAWPQSHLDWVRPGIIMYGVSPFDDKTAQDLGYQPV 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+   GE V YGG     RD+ + V A+GY DGYP +             
Sbjct: 242 MTLKSHLIAVREVKKGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN---------- 291

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y
Sbjct: 292 -GTPVWVNGRKVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVAGHIGTIAY 350

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++  R    Y+
Sbjct: 351 ELVTKLTPRVEMEYS 365


>gi|197334235|ref|YP_002155060.1| alanine racemase [Vibrio fischeri MJ11]
 gi|197315725|gb|ACH65172.1| alanine racemase [Vibrio fischeri MJ11]
          Length = 357

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 170/368 (46%), Gaps = 18/368 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
              +ID++AL +N   +   + +++  AVVK N YG G   IA      G   F V  +E
Sbjct: 4   ATAQIDMSALAHNLQKIKQQAPSSKLLAVVKANGYGHGLLNIAKGAQ--GADAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G +   +  I  TN I       +     +           L
Sbjct: 62  EALQLRAGGIVKPILLLEGFYSAGDLPILVTNNIQTAIHCKEQLEALESTDLEFPVVAWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VD+G +RLG+  +E  ++       K + +    +SH  CAD+  S   + Q++ F +L
Sbjct: 122 KVDSGMHRLGIRPEEFQEYVDRLHACKNVAKPLRYMSHFGCADELDSSTTTEQIDTFMSL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARI 242
               +G E SLA+S+G+L  P+      RPGI +YG +    +S         +T  + +
Sbjct: 182 TKGCQG-ERSLAASAGLLAWPDSRLDWVRPGIIMYGVSPFSEQSAQELGYLPTMTLTSHL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YG      RD+ I V AIGY DGYP T              G    +
Sbjct: 241 IAVRDVKAGESVGYGAMWTSERDTKIGVIAIGYGDGYPRTAPN-----------GTPVLV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+      +VGD   ++G D+  ++VA   GT  Y+L+ ++ 
Sbjct: 290 NGRKVPIAGRVSMDMLTVDLGPEAQDKVGDEAILWGRDLPSEEVAEHIGTIAYELVTKLT 349

Query: 363 TRYAKFYT 370
           +R    YT
Sbjct: 350 SRVQMQYT 357


>gi|220903457|ref|YP_002478769.1| alanine racemase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774]
 gi|259710065|sp|B8J2K3|ALR_DESDA RecName: Full=Alanine racemase
 gi|219867756|gb|ACL48091.1| alanine racemase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774]
          Length = 371

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 163/376 (43%), Gaps = 21/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +  +  +IDL+A ++N   + +L         ++K + YG G   +A      G     V
Sbjct: 5   DRPVWAEIDLSAFRHNMRQIKSLLQPGTIFCPIIKADGYGHGAVPLAHEAVAMGAGYLGV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++E   LR       I +L    P     +   ++   I S  Q    S   S  G++
Sbjct: 65  AILDEAAALRAAGITLPILILGYTPPQAAAFVVSNHITQTIFSKEQADALSAAASNLGIT 124

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++VDTG  R+G+  +EA  F       +   L  + +H A +D         Q  R
Sbjct: 125 VKVHVKVDTGMTRIGVRPEEAAAFCSYVAGLENVHLEGMFTHFASSDSADHAYCLEQFGR 184

Query: 182 FRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QT 234
           F   I+     GI       A+S+ IL  P  H  + R GI LYG         P+  + 
Sbjct: 185 FTAAIAAVEASGIRLGIRHCANSAAILSLPEGHLDMVRAGIILYGLKPSDECPMPIDLRP 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  +AR+ ++++   G  VSYG      ++S +A   IGYADGY   LS          
Sbjct: 245 VMRLKARLAMVKQVPPGVGVSYGSIYHTQKESSLATIPIGYADGYTRMLS---------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVALASGTT 353
               +  ++G   P++G+I MD  M D++      VGD + +F GPD+  D++A   GT 
Sbjct: 295 -RKAQVLLRGQRAPVVGRICMDQCMVDVSHVPQAAVGDEVLLFGGPDLPADEIAAHLGTI 353

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +G R  + Y
Sbjct: 354 NYEVVCMVGKRVPRVY 369


>gi|170759362|ref|YP_001788727.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
 gi|169406351|gb|ACA54762.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
          Length = 386

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGSMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGIKEPIMILGYTPCALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        Q+  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIQIEGVFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+  +   I+  +          +A+S+ I+   + H    R GI +YG       +  +
Sbjct: 181 QMNNYNEFINKLEEKNIQVHIKHIANSAAIIDLESTHLDAVRAGIIMYGYYPSNYVLRNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 IKLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTERESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTSIENLKVGDVVTIMGEENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|262393111|ref|YP_003284965.1| alanine racemase biosynthetic [Vibrio sp. Ex25]
 gi|262336705|gb|ACY50500.1| alanine racemase biosynthetic [Vibrio sp. Ex25]
          Length = 361

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 1   MSYMKAAKACIDLSALQHNLQRVKAQAPQSKVMAVVKANGYGHGLRHVAKHA--NHADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  +F                +SH  CAD+  SH+   Q
Sbjct: 118 TPVVVWLKIDSGMHRLGVRPEQYDEFVTRLKECPNVAKPLRYMSHFGCADELDSHITPQQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
           +E F++L S  +G E SLA+S+G+L  P  H    RPGI +YG +   +K       Q V
Sbjct: 178 IELFKSLTSGCQG-ERSLAASAGLLAWPQSHLDWVRPGIIMYGVSPFDDKTAQDLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+   GE V YGG     RD+ + V A+GY DGYP +             
Sbjct: 237 MTLKSHLIAVREVKKGESVGYGGMWTSKRDTKVGVIAVGYGDGYPRSAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVWVNGRKVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVAGHIGTIAY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++  R    Y+
Sbjct: 346 ELVTKLTPRVEMEYS 360


>gi|312127105|ref|YP_003991979.1| alanine racemase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777124|gb|ADQ06610.1| alanine racemase [Caldicellulosiruptor hydrothermalis 108]
          Length = 390

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/380 (25%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL  L  N  ++           AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEIDLDNLVYNLENIKKKILPQTHIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + S+     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSQAAQKVGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLE 180
              ++VDTG  R+G     E++    N       +L  I SH + ADDP S      Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCDESIQTVLNIAKLPNIELEGIFSHFSSADDPDSDNFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPNSSLKEHISIK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGKQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEIVCSFSKRIPRVY 376


>gi|168181951|ref|ZP_02616615.1| alanine racemase [Clostridium botulinum Bf]
 gi|237796857|ref|YP_002864409.1| alanine racemase [Clostridium botulinum Ba4 str. 657]
 gi|182674830|gb|EDT86791.1| alanine racemase [Clostridium botulinum Bf]
 gi|229261016|gb|ACQ52049.1| alanine racemase [Clostridium botulinum Ba4 str. 657]
          Length = 386

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGAMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKNPIMILGYTPWALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIEIEGVFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +     L      +S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNEFINKLEEKNIQLPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTKRESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|284033912|ref|YP_003383843.1| alanine racemase [Kribbella flavida DSM 17836]
 gi|283813205|gb|ADB35044.1| alanine racemase [Kribbella flavida DSM 17836]
          Length = 375

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 31/382 (8%)

Query: 6   FLRLK--IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +R +  +DL A+++N  ++ A   +A    VVK + YG G   +A A   AG     V 
Sbjct: 1   MVRAEAVVDLAAIRHNVAALRARLSSAELMTVVKADGYGHGMAPVARAARQAGADWIGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE ++LR       IF                ++     +  ++   +  +       
Sbjct: 61  VLEEALELRAAGDNGPIFCWLTTPGEPLARAIANDIDLSAGAPWEIDELAAGV-TDRPAR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLE 180
             L++DTG  R G   +E       +  ++     +   I SHLA +D+P S VN  Q+ 
Sbjct: 120 VHLKIDTGLGRGGAVPEEWPTLIRAALKEQKTGRIVITGIWSHLASSDEPKSPVNEAQVA 179

Query: 181 RFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
            F + ++  + +        LA+S G L  P  HF L RPGI+ YG +       +    
Sbjct: 180 TFESAVAVAESLGVDPGFKHLANSGGTLALPETHFDLVRPGIATYGLSPFGHALPSAELG 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +T  AR+ + ++  AG  VSYG      + S + +  +GY DG P   S       
Sbjct: 240 LRPAMTLRARLAMAKRVPAGAGVSYGLTWTAPKPSTLGLVPLGYGDGLPRHASN------ 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                G    + G    ++G+I MD  + ++ D      GD + +FGP    +   DD A
Sbjct: 294 -----GAPVQVHGIRRSVVGRICMDQCVVNL-DDGDAAAGDEVVLFGPGDHGEPTADDWA 347

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
            A+GT NY+++ R+G R  + Y
Sbjct: 348 DAAGTINYEIVTRLGPRIPRRY 369


>gi|332798489|ref|YP_004459988.1| alanine racemase [Tepidanaerobacter sp. Re1]
 gi|332696224|gb|AEE90681.1| Alanine racemase [Tepidanaerobacter sp. Re1]
          Length = 393

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 95/381 (24%), Positives = 170/381 (44%), Gaps = 27/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+L  L++N   +  ++  NA+  A+VK + YG G  ++A    + G     V 
Sbjct: 9   RPTWAEINLDDLRHNLLEIRRITSTNAKLCAIVKADGYGHGAVEVAQTALSCGAHYLGVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            ++E V+LR    +A I +L      Q   I + ++   + S+        K +      
Sbjct: 69  FLDEAVELREKGIKAPILILGFTPENQFDTIIEHDITQTVYSLKSAILLSEKALKRKKKA 128

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG +R+G      ++      F  +  ++  I++H A AD+    V   Q   
Sbjct: 129 KVHIKLDTGMSRIGFQTDASSISDIRKLFQLEGLKVEGILTHFAKADEKDRTVTEEQFRI 188

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F   ++  +  +       +A+S+GI+  PN H  + RPGI LYG             ++
Sbjct: 189 FTEAVNTIEAKDYKIPIKHIANSAGIIEYPNTHLDMVRPGIILYGMYPSDEITKSKIHLK 248

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            +++ + R+  ++    G+ +SYGG     R ++IA   +GYADGY   LS         
Sbjct: 249 PILSLKTRVAHVKSLPKGKAISYGGTYITERHTIIATLPVGYADGYSRLLSSR------- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDDVAL 348
                +  I G   P++G+I MD  M D+TD    ++  D + + G D    I+ +D+A 
Sbjct: 302 ----AQVLINGQRAPVVGRICMDQCMVDVTDIQGEVKPKDEVTLIGADGSERIEAEDIAK 357

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++   I  R  + Y
Sbjct: 358 IIGTINYEITCGISKRVPRVY 378


>gi|323493025|ref|ZP_08098160.1| alanine racemase [Vibrio brasiliensis LMG 20546]
 gi|323312723|gb|EGA65852.1| alanine racemase [Vibrio brasiliensis LMG 20546]
          Length = 358

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 113/365 (30%), Positives = 175/365 (47%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL AL++N   +   + +++  AVVK NAYG G   +A +    G   F V  +EE ++
Sbjct: 8   IDLEALQHNLQQIKLQAPSSKIMAVVKANAYGHGLRHVAKSAK--GADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L++D
Sbjct: 66  LRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLVALEQ-AELETPVVVWLKID 124

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  DF                +SH  CAD+    + + Q E F TL   
Sbjct: 125 SGMHRLGVRPEQYSDFVTRLKACDNVAKPLRYMSHFGCADELDRPITNEQTELFMTLTEG 184

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P+      RPGI +YG +   +K       Q V+T ++ +I +
Sbjct: 185 CEG-ERSLAASAGLLAWPDSQLDWVRPGIIMYGVSPFNDKTAQDLGYQPVMTLKSHLIAV 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AGE V YGG     RD+ + V AIGY DGYP T              G    + G 
Sbjct: 244 RDVKAGESVGYGGVWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVLVNGR 292

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+      +VGD   ++G D+  ++VA   GT  Y+L+ ++ +R 
Sbjct: 293 KVPISGRVSMDMLTVDLGPDAKDQVGDEAILWGRDLPAEEVAGHIGTIAYELVTKLTSRV 352

Query: 366 AKFYT 370
              Y+
Sbjct: 353 DMEYS 357


>gi|332982730|ref|YP_004464171.1| alanine racemase [Mahella australiensis 50-1 BON]
 gi|332700408|gb|AEE97349.1| alanine racemase [Mahella australiensis 50-1 BON]
          Length = 376

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 164/378 (43%), Gaps = 27/378 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +I LT +  N   +    G+     AVVK + YG G  ++A    +AG +   V   E
Sbjct: 9   WAEIRLTDIAYNIAQLRRCIGDDTLFMAVVKADGYGHGAYRVAQTAIDAGARWLGVAIAE 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           EG +LR     A I VL GI P + + +  + L   + S+      S   +  G S    
Sbjct: 69  EGAELRDKGIDAPILVLGGIMPYEAEEVVASGLCQTVFSLDVAKALSDASVKQGKSADVH 128

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           ++VDTG  R+G+    E               ++ + +H A +D         Q+  F  
Sbjct: 129 IKVDTGMGRVGVRPGLELEQLIEGLVGLPGINITGMFTHFAESDACDKSFTKYQMSLFVQ 188

Query: 185 LISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV---- 235
            I+  K      +    A+S+ ++   + HF + R GIS+YG       ++P +      
Sbjct: 189 AINQAKAMNVGPLILHAANSAAVIDYTDAHFNMVRGGISIYGYYPSNEINNPQKIDLKPA 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ +AR++ ++   AG  +SYG      R S IA  + GYADGY   LS           
Sbjct: 249 LSWKARVVYVKDVPAGTPISYGRTFTTQRSSKIATISAGYADGYRRQLSN---------- 298

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
             G   I+G   P++G++ MD  M D+TD   +  GD + + G      I  D++A    
Sbjct: 299 -KGCVLIRGNRAPVIGRVCMDQFMVDVTDIPGVVTGDEVVLIGRQGNETITADELAELCD 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y++L  IG R  + Y
Sbjct: 358 TISYEILTSIGPRVPRIY 375


>gi|255747170|ref|ZP_05421113.1| alanine racemase biosynthetic [Vibrio cholera CIRS 101]
 gi|262147254|ref|ZP_06028055.1| alanine racemase biosynthetic [Vibrio cholerae INDRE 91/1]
 gi|255735219|gb|EET90621.1| alanine racemase biosynthetic [Vibrio cholera CIRS 101]
 gi|262031314|gb|EEY49927.1| alanine racemase biosynthetic [Vibrio cholerae INDRE 91/1]
 gi|327483230|gb|AEA77637.1| Alanine racemase, biosynthetic [Vibrio cholerae LMA3894-4]
          Length = 364

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 177/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 118 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 178 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 237 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 345

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 346 ELVTKLTSRVEMSY 359


>gi|241203930|ref|YP_002975026.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240857820|gb|ACS55487.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 389

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 185/365 (50%), Positives = 246/365 (67%), Gaps = 2/365 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR +AVVK +AYG+G E    ALY AG +DFFV +V+
Sbjct: 21  LRLTVDLTALTENWRDMARRSGAARASAVVKADAYGMGIEDAGEALYMAGARDFFVATVD 80

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P+ARIFVL GI PG E+  FD +L+PVISS  QL F+  +++    +P AL
Sbjct: 81  EGVTLRLYAPEARIFVLSGIWPGTERRFFDNDLVPVISSDEQLAFWMAVLADYGDYPCAL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTGFNRLGL + +A+    +          L++SHLACADDP+  +N  QLE F  + 
Sbjct: 141 HVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSHLACADDPTHAMNRQQLESFHRVS 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG      ++PM+ V TAEARII +R
Sbjct: 201 AAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVSGMANPMRPVATAEARIIQVR 260

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE VSYG   +L R+S +A+A+ GYADGY  + S         V  GG+GFI G+ 
Sbjct: 261 SVAAGETVSYGRALQLRRESRLAIASAGYADGYMRSQSSGGVPLRQVVPQGGQGFIAGHK 320

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+ITMD+T+FDITD     +  GDY+++FG ++ +DDVA ASGT  Y++L  +G R
Sbjct: 321 VPVAGRITMDLTIFDITDLPDNAVRAGDYVELFGKNMPVDDVARASGTIGYEILTSMGLR 380

Query: 365 YAKFY 369
           + + Y
Sbjct: 381 HERRY 385


>gi|254230408|ref|ZP_04923789.1| alanine racemase [Vibrio sp. Ex25]
 gi|151937067|gb|EDN55944.1| alanine racemase [Vibrio sp. Ex25]
          Length = 366

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 181/375 (48%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 6   MSYMKAAKACIDLSALQHNLQRVKAQAPQSKVMAVVKANGYGHGLRHVAKHA--NHADAF 63

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 64  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLE 122

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  +F                +SH  CAD+  SH+   Q
Sbjct: 123 TPVVVWLKIDSGMHRLGVRPEQYDEFVTRLKECPNVAKPLRYMSHFGCADELDSHITPQQ 182

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
           +E F++L S  +G E SLA+S+G+L  P  H    RPGI +YG +   +K       Q V
Sbjct: 183 IELFKSLTSGCQG-ERSLAASAGLLAWPQSHLDWVRPGIIMYGVSPFDDKTAQDLGYQPV 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+   GE V YGG     RD+ + V A+GY DGYP +             
Sbjct: 242 MTLKSHLIAVREVKKGESVGYGGMWTSKRDTKVGVIAVGYGDGYPRSAPN---------- 291

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y
Sbjct: 292 -GTPVWVNGRKVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVAGHIGTIAY 350

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++  R    Y+
Sbjct: 351 ELVTKLTPRVEMEYS 365


>gi|15640399|ref|NP_230026.1| alanine racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121590967|ref|ZP_01678287.1| alanine racemase, biosynthetic [Vibrio cholerae 2740-80]
 gi|153216658|ref|ZP_01950565.1| alanine racemase, biosynthetic [Vibrio cholerae 1587]
 gi|153823514|ref|ZP_01976181.1| alanine racemase, biosynthetic [Vibrio cholerae B33]
 gi|153827276|ref|ZP_01979943.1| alanine racemase, biosynthetic [Vibrio cholerae MZO-2]
 gi|153830458|ref|ZP_01983125.1| alanine racemase, biosynthetic [Vibrio cholerae 623-39]
 gi|227080584|ref|YP_002809135.1| alanine racemase, biosynthetic [Vibrio cholerae M66-2]
 gi|229504955|ref|ZP_04394466.1| alanine racemase biosynthetic [Vibrio cholerae BX 330286]
 gi|229508607|ref|ZP_04398103.1| alanine racemase biosynthetic [Vibrio cholerae B33]
 gi|229516019|ref|ZP_04405470.1| alanine racemase biosynthetic [Vibrio cholerae RC9]
 gi|229526947|ref|ZP_04416344.1| alanine racemase biosynthetic [Vibrio cholerae 12129(1)]
 gi|229606347|ref|YP_002876995.1| alanine racemase [Vibrio cholerae MJ-1236]
 gi|254227117|ref|ZP_04920668.1| alanine racemase, biosynthetic [Vibrio cholerae V51]
 gi|254286204|ref|ZP_04961163.1| alanine racemase, biosynthetic [Vibrio cholerae AM-19226]
 gi|254851683|ref|ZP_05241033.1| alanine racemase [Vibrio cholerae MO10]
 gi|298501269|ref|ZP_07011067.1| alanine racemase [Vibrio cholerae MAK 757]
 gi|9654790|gb|AAF93545.1| alanine racemase, biosynthetic [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547193|gb|EAX57320.1| alanine racemase, biosynthetic [Vibrio cholerae 2740-80]
 gi|124114169|gb|EAY32989.1| alanine racemase, biosynthetic [Vibrio cholerae 1587]
 gi|125620360|gb|EAZ48743.1| alanine racemase, biosynthetic [Vibrio cholerae V51]
 gi|126518959|gb|EAZ76182.1| alanine racemase, biosynthetic [Vibrio cholerae B33]
 gi|148874060|gb|EDL72195.1| alanine racemase, biosynthetic [Vibrio cholerae 623-39]
 gi|149738824|gb|EDM53166.1| alanine racemase, biosynthetic [Vibrio cholerae MZO-2]
 gi|150423619|gb|EDN15561.1| alanine racemase, biosynthetic [Vibrio cholerae AM-19226]
 gi|227008472|gb|ACP04684.1| alanine racemase, biosynthetic [Vibrio cholerae M66-2]
 gi|229335559|gb|EEO01039.1| alanine racemase biosynthetic [Vibrio cholerae 12129(1)]
 gi|229346922|gb|EEO11889.1| alanine racemase biosynthetic [Vibrio cholerae RC9]
 gi|229354375|gb|EEO19302.1| alanine racemase biosynthetic [Vibrio cholerae B33]
 gi|229358013|gb|EEO22929.1| alanine racemase biosynthetic [Vibrio cholerae BX 330286]
 gi|229369002|gb|ACQ59425.1| alanine racemase biosynthetic [Vibrio cholerae MJ-1236]
 gi|254847388|gb|EET25802.1| alanine racemase [Vibrio cholerae MO10]
 gi|297540023|gb|EFH76086.1| alanine racemase [Vibrio cholerae MAK 757]
          Length = 375

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 177/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 357 ELVTKLTSRVEMSY 370


>gi|119776189|ref|YP_928929.1| alanine racemase [Shewanella amazonensis SB2B]
 gi|254802373|sp|A1SA53|ALR_SHEAM RecName: Full=Alanine racemase
 gi|119768689|gb|ABM01260.1| alanine racemase [Shewanella amazonensis SB2B]
          Length = 364

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 176/370 (47%), Gaps = 22/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA----GVQDF 60
            F R +I   ALK N   +  ++  ++  AVVK N YG G   +A  L +A        F
Sbjct: 3   PFPRAEISSRALKANLKRLRQIAPGSKVMAVVKANGYGHGLLNVAEVLTDAHSNADADGF 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            +  +EE +++R     AR+ +L G        ++ + ++  V+  V QL     +    
Sbjct: 63  GLARLEEALEVRAGGVSARLLLLEGFFRSEDLPLLVEHDIDTVVHHVSQLDMLESVSLS- 121

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG    E  D       N  + +   +++H +CAD+P     + Q
Sbjct: 122 KPVTVWLKIDSGMHRLGFHASEFKDVYQRLQQNPNVAKPVHLMTHFSCADEPQKDFTATQ 181

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTV 235
           +  F  L     G + +LA+S+G+L  P       RPGI+LYG +     +  +H ++  
Sbjct: 182 MAHFNALTQGLPG-DRTLANSAGVLYWPQSQADWIRPGIALYGVSPVAGDLGSNHGLEPA 240

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   +++I +R+  AGE V YG     +RD+ + V AIGY DGYP               
Sbjct: 241 MELVSQLIAVREHSAGESVGYGAYWTASRDTRLGVVAIGYGDGYPRNA-----------P 289

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI+G+++MDM   D+    + +VGD   ++G ++ +++VA   GT  Y
Sbjct: 290 EGTPVLVNGRRVPIVGRVSMDMLTVDLGPDAADKVGDRALLWGKELPVEEVAERIGTIAY 349

Query: 356 DLLVRIGTRY 365
           +L+ ++  R 
Sbjct: 350 ELVTKLTPRV 359


>gi|297582256|ref|ZP_06944171.1| alanine racemase [Vibrio cholerae RC385]
 gi|297533514|gb|EFH72360.1| alanine racemase [Vibrio cholerae RC385]
          Length = 375

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 113/374 (30%), Positives = 177/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKIDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 357 ELVTKLTSRVEMSY 370


>gi|118444310|ref|YP_877347.1| alanine racemase [Clostridium novyi NT]
 gi|166919551|sp|A0PY95|ALR_CLONN RecName: Full=Alanine racemase
 gi|118134766|gb|ABK61810.1| alanine racemase [Clostridium novyi NT]
          Length = 387

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 108/385 (28%), Positives = 168/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +I+L  L +N   +  LS       +VK +AYG G   I P L   G   
Sbjct: 1   MFKHLRPVWAEINLDNLASNMKHIKELSNTKEIIGIVKADAYGHGALDIVPTLIENGATA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V  V EGV+LR    +  I VL    P    ++   ++   + S+      SK     
Sbjct: 61  LAVAVVSEGVELRRGGIECPIMVLGFTPPSLIDMLLKHDIEQTVFSLDYAKELSKAAEKM 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    E ++            ++  + SH + AD+ +   ++ 
Sbjct: 121 HKVAKIHIAVDTGMGRIGFLPNEQSIQDVKAISMLPNIKIKGMFSHFSTADEKNKEYSAY 180

Query: 178 QLERFRTLIS----HYKGIE-ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           QL +F             IE   +++S+ I+  P   F+  RPGI LYG           
Sbjct: 181 QLNQFNKFYEGLKRENVNIETRHISNSAAIMDLPETIFEGVRPGIILYGYYPSNEVDKTK 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+  +  ++ I+K  +GE +SYG + K  R+SLIA   +GYADGY   L G    
Sbjct: 241 LELKPVMQLKTNVVHIKKIPSGEYISYGRKFKTDRESLIATLPVGYADGYTRLLFG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLD 344
                    K  I G + P++G+I MD  M DITD    I+VG+ + + G      I  D
Sbjct: 297 -------KAKVIINGQLAPVVGRICMDQCMVDITDIKGDIKVGEEVILIGEKNGVKIDAD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A   GT NY+++  I  R  + Y
Sbjct: 350 DIAEMLGTINYEVICMISKRVPRVY 374


>gi|187776664|ref|ZP_02993137.1| hypothetical protein CLOSPO_00179 [Clostridium sporogenes ATCC
           15579]
 gi|187775323|gb|EDU39125.1| hypothetical protein CLOSPO_00179 [Clostridium sporogenes ATCC
           15579]
          Length = 386

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 97/384 (25%), Positives = 174/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKEIKKICGNKEIIGVIKANAYGHGAMEIAPTLLANGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       S++    
Sbjct: 61  LAVAVLSEAMELRMSGVKEPIMILGYTPWALGDMLLDNDIEQSVYSYNDALELSRIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVENVYKISKLPNIKIEGVFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   + H    R GI +YG       +  +
Sbjct: 181 QMNKYNQFINKLEEKNIQVPIKHIANSAAIIDLESTHLDAVRAGIIMYGYYPSNYVLTNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  ++S+IA   IGYADGY   LS     
Sbjct: 241 TKLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTEKESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T    ++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTSIEDLKVGDVVTIMGEESGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASEIGTISYEVICNVNKRVPRVY 373


>gi|148381338|ref|YP_001255879.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|153933765|ref|YP_001385715.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|153935067|ref|YP_001389121.1| alanine racemase [Clostridium botulinum A str. Hall]
 gi|148290822|emb|CAL84957.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|152929809|gb|ABS35309.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|152930981|gb|ABS36480.1| alanine racemase [Clostridium botulinum A str. Hall]
          Length = 386

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 175/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGAMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKEPIMILGYTPWALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  I SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIEIEGIFSHFSSADESDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNAFINKLEEKNIQVPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTKRESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|262166870|ref|ZP_06034592.1| alanine racemase biosynthetic [Vibrio cholerae RC27]
 gi|262024700|gb|EEY43379.1| alanine racemase biosynthetic [Vibrio cholerae RC27]
          Length = 364

 Score =  305 bits (782), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 176/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF         + +    +SH  CAD+        Q
Sbjct: 118 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCDNVAKPLRYMSHFGCADELDKSTTVEQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 178 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 237 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 345

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 346 ELVTKLTSRVEMSY 359


>gi|226950848|ref|YP_002805939.1| alanine racemase [Clostridium botulinum A2 str. Kyoto]
 gi|226841311|gb|ACO83977.1| alanine racemase [Clostridium botulinum A2 str. Kyoto]
          Length = 386

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 176/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGAMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKEPIMILGYTPWALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIEIEGVFSHFSSADESDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNAFINKLEEKNIQVPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYGG  K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGGTFKTKRESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|229512608|ref|ZP_04402078.1| alanine racemase biosynthetic [Vibrio cholerae TMA 21]
 gi|229350390|gb|EEO15340.1| alanine racemase biosynthetic [Vibrio cholerae TMA 21]
          Length = 375

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 177/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLHHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 357 ELVTKLTSRVEMSY 370


>gi|167746566|ref|ZP_02418693.1| hypothetical protein ANACAC_01276 [Anaerostipes caccae DSM 14662]
 gi|167653526|gb|EDR97655.1| hypothetical protein ANACAC_01276 [Anaerostipes caccae DSM 14662]
          Length = 388

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 162/384 (42%), Gaps = 26/384 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+    +   IDL A+ +N   +  L   + +   V+K + YG G   +A AL   GV  
Sbjct: 1   MNQYYRVYAAIDLDAVCHNISEIKKLVGPDTKIMPVIKADGYGHGAVPVAKALNKIGVDG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V  +EEG+ LR       I +L      Q   +    +   + S       SK     
Sbjct: 61  FAVAIIEEGIALRKQGITKPILILGYTSEYQYASLIQHEIEQTVFSYEMAEAISKFAVTM 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  ++VDTG NR+G    +E++            ++  I +H ACAD+        
Sbjct: 121 KKEARIHIKVDTGMNRIGFKPTEESVGQVQRIQKLPNIKIQGIFTHFACADEEDKTSARY 180

Query: 178 QLERFRTLISHY--KGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q E F   +S    KGIE     +++S+ I+        + R GI  YG           
Sbjct: 181 QKELFDQFVSKIEEKGIEIPVKHVSNSAAIMDLRECRMDMVRSGIITYGLYPSEEVDKSA 240

Query: 233 Q---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 ++  + +I +++   GE VSYG      R + IA   +GYADGYP  LS     
Sbjct: 241 IDLKPALSLISHVIHVKEVGPGEGVSYGSTFVTDRKTRIATIPVGYADGYPRALSSR--- 297

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G+  I+G   PI+G+I MD  M D+TD   + V D + + G     +I +++
Sbjct: 298 --------GRVIIRGQYAPIIGRICMDQFMVDVTDIEGVSVMDRVTLVGTEGDKNISVEE 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A  +G+ NY+ +  IG R  + Y
Sbjct: 350 AADLAGSFNYEFVCGIGKRVPRVY 373


>gi|302184903|ref|ZP_07261576.1| alanine racemase [Pseudomonas syringae pv. syringae 642]
          Length = 357

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 164/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLARENSGG-KALAVVKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A + +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHDLWTVVHATWQLEAIEQAHLGKPITV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH + AD+ +S  +  QL  F T
Sbjct: 120 WLKLDTGMHRVGLHPHEYQAAYQRLLATGKVARIVLMSHFSRADELNSGCSDEQLAVFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  +L  P      +RPGI LYG T        +  +Q V+T E++
Sbjct: 180 F-RKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFEQVHPLADRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V YG      R S I V A+GYADGYP                G    
Sbjct: 239 IISVRELPVGEPVGYGATFVCDRPSRIGVVAMGYADGYPRHA-----------PTGTPVQ 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  + T  Y++   +
Sbjct: 288 IDGQPSRLLGRVSMDMLCVDLTDVPKAGLGSRVELWGKQVLASEVAQGAETIPYEIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|121729738|ref|ZP_01682178.1| alanine racemase, biosynthetic [Vibrio cholerae V52]
 gi|147674692|ref|YP_001218641.1| alanine racemase [Vibrio cholerae O395]
 gi|121628523|gb|EAX61007.1| alanine racemase, biosynthetic [Vibrio cholerae V52]
 gi|146316575|gb|ABQ21114.1| alanine racemase, biosynthetic [Vibrio cholerae O395]
 gi|227012228|gb|ACP08438.1| alanine racemase, biosynthetic [Vibrio cholerae O395]
          Length = 375

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 176/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF         + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCDNVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 357 ELVTKLTSRVEMSY 370


>gi|188584948|ref|YP_001916493.1| alanine racemase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349635|gb|ACB83905.1| alanine racemase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 390

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 23/372 (6%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +I+L  L  N++ +     N +   ++K + YG G  +IA  L N GV    V  ++E V
Sbjct: 13  EINLDNLSYNFNRIREHVNNKKIMGIIKADGYGHGAVEIAEELLNQGVDYLGVAILDEAV 72

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYALQV 128
           +LR     A I +L         +     + P I +       S+     G +    +++
Sbjct: 73  ELRKAGIAAPILILGYTPVEHVDVCLKYGITPTIYTYEMAEALSQTARKMGKTAFVHVKI 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           DTG  R+G++ + + +F  N       ++  + +H + AD+        Q+  F   +  
Sbjct: 133 DTGMGRIGIAPENSAEFVKNISKLPSLEVEGVFTHFSVADEEDKTYTQQQINSFEKALKM 192

Query: 188 -HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEAR 241
              +GIE  L  ++     +  P+ +F + R G++L+G        +   ++ V++ + +
Sbjct: 193 LEDEGIEIPLKHAANSPATIDLPDAYFDMVRVGLALFGLYPSPHMKEKISLKPVMSLKTQ 252

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  +++   G  +SYG +     +S+I    +GYADG+   LS +           G+  
Sbjct: 253 VSHVKQVPKGTSISYGRKFITEDESIIGTLPVGYADGFTRLLSNI-----------GEVI 301

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDL 357
           + G  VPI+G I MD  MF   D   I +GD + I G      I ++D+A   GT NY++
Sbjct: 302 VNGKRVPIVGAICMDQCMFLGDDVPEIGIGDEVVIIGEQDGTQITVEDIADKLGTINYEI 361

Query: 358 LVRIGTRYAKFY 369
           +  +  R  + Y
Sbjct: 362 VTMVDKRVPRLY 373


>gi|325290796|ref|YP_004266977.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966197|gb|ADY56976.1| alanine racemase [Syntrophobotulus glycolicus DSM 8271]
          Length = 376

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 179/381 (46%), Gaps = 25/381 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH        IDL AL+ N+  +   + N+   A+VK NAYG G  +I   L   GV+ F
Sbjct: 1   MHGMRPAWACIDLGALRRNYRRICRQT-NSEVMAIVKANAYGHGALEIVRTLKEEGVRRF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V  +EE +++R   P+  + ++    P Q + I    +IP +  + Q   +S      G
Sbjct: 60  GVAILEEALQIREKFPEVTVMLIGPTMPDQAERIVAEGIIPEVFRLEQAEAFSLEAEKKG 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +     ++VDTG  R+G   ++AL+           ++  I +HLA AD+        QL
Sbjct: 120 IPAILHIKVDTGMGRIGFQ-EDALENILKIAQLPGIEIEGIYTHLATADEIDLGFAFTQL 178

Query: 180 ERFR-----TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPM 232
           +RF         +        +A+S+ IL   +  ++L RPG+ LYG          +  
Sbjct: 179 KRFDGLYESLKTAGLNIPMRHVANSAAILQLRDQEYELCRPGLMLYGQLPMNHWEGENGF 238

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + +++ +ARI+ ++K  AG+ VSYG        +L+A   +GYADG   +LS   +    
Sbjct: 239 EPLMSLKARIVHLKKIAAGDSVSYGRTFIAQAPTLVATLPLGYADGLRRSLSNNWN---- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    +KG   P++G+I MD TM D+T    +E+GD + I G +    +    +A 
Sbjct: 295 -------VIVKGRYAPVIGRICMDQTMIDVTGIEGVEIGDEVTILGSEGKSSLTAAQMAE 347

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT +Y++L  I  R  + Y
Sbjct: 348 CAGTISYEILCGISQRVPRVY 368


>gi|77461745|ref|YP_351252.1| alanine racemase [Pseudomonas fluorescens Pf0-1]
 gi|77385748|gb|ABA77261.1| alanine racemase, catabolic [Pseudomonas fluorescens Pf0-1]
          Length = 365

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 170/370 (45%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 10  RPARALIDLQALRHNYRIAREVTG-AKALAVIKADAYGHGAVRCAQALEAE-ADGFAVAC 67

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + +   V+ S+ QL    +  +      
Sbjct: 68  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHDFWCVVHSLWQLEAIEQT-TLSKPIT 126

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++                 +++SH A AD+     ++ Q+  F 
Sbjct: 127 VWLKLDSGMHRVGLHPKDYPAAYQRLLASGNVAKVVLMSHFARADELHEQSSADQVAVFE 186

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEA 240
                    E SL +S  +L  P  H    RPGI LYG T     +     +Q V+T E+
Sbjct: 187 A-ARQGLAAEVSLRNSPAVLGWPQIHSDWVRPGIMLYGATPFEEANAVAERLQPVMTLES 245

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    +   I V A+GYADGYP                G   
Sbjct: 246 KVISVRELPAGEPVGYGAKFITDKPMRIGVVAMGYADGYPRQA-----------PTGTPV 294

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ILG+++MDM   D+TD     +G  ++++G +I   DVA  + T  Y +   
Sbjct: 295 LVAGQRSRILGRVSMDMLCIDLTDVPQAGLGSTVELWGKNILASDVAKWADTIPYQIFCN 354

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 355 L-RRVPRLYS 363


>gi|320155181|ref|YP_004187560.1| alanine racemase, biosynthetic [Vibrio vulnificus MO6-24/O]
 gi|319930493|gb|ADV85357.1| alanine racemase, biosynthetic [Vibrio vulnificus MO6-24/O]
          Length = 361

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 18/374 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     IDL AL++N   +   + +++  AVVK N YG G   +A      G   F
Sbjct: 1   MNYMKAATACIDLVALQHNLQLIKQQAPHSKLMAVVKANGYGHGLRHVAKHAV--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 59  GVARIEEALQLRACGVVKPILLLEGFYSSGDLPVLVTNNIQTVVHCEEQLRDLENAELET 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L++D+G +RLG+  ++   F         + +    +SH  CAD+ ++ +   Q+
Sbjct: 119 PVVVWLKIDSGMHRLGVRPEQYQAFVERLHQCPNVAKPLRYMSHFGCADEMNNEMTPKQI 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           E F +L    KG E SLA+S+G+L       +  RPGI +YG +   +K       + V+
Sbjct: 179 ELFLSLTRGCKG-ERSLAASAGLLAWQESQLEWVRPGIIMYGVSPFGDKTASELGYKPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +I +R   AGE V YG      RD+ + V AIGY DGYP T              
Sbjct: 238 TLKSHLIAVRDVKAGESVGYGATWISERDTKVGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VPI G+++MDM   D+    +  VGD   ++G D+  +DVA   GT  Y+
Sbjct: 287 GTPVLVNGRKVPIAGRVSMDMLTVDLGPDATDHVGDEAILWGADLPAEDVAQHIGTIAYE 346

Query: 357 LLVRIGTRYAKFYT 370
           L+ ++ +R    Y+
Sbjct: 347 LVTKLTSRVEMSYS 360


>gi|260775631|ref|ZP_05884528.1| alanine racemase biosynthetic [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608812|gb|EEX34977.1| alanine racemase biosynthetic [Vibrio coralliilyticus ATCC BAA-450]
          Length = 361

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +     IDL AL++N   + + + N++  AVVK N+YG G   +A    +     F
Sbjct: 1   MSYMKAATAFIDLDALQHNLKQIKSQAPNSKIMAVVKANSYGHGLRHVAKHATD--ADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRACGVVTPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLEALEQ-AELD 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  DF       + + +    +SH  CAD+      + Q
Sbjct: 118 TPVVVWLKIDSGMHRLGVRPEQYTDFVSRLKACRNVAKPLRYMSHFGCADELDKSTTTEQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
            E F  L    +G E SLA+S+G+L   N      RPGI +YG +   +K       Q V
Sbjct: 178 TELFLALTDGCEG-ERSLAASAGLLAWQNSQLDWVRPGIIMYGVSPFNDKTAQQMGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R   AGE V YGG     RD+ + V AIGY DGYP T             
Sbjct: 237 MTLKSHLIAVRDVKAGESVGYGGMWTSQRDTKVGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+    + +VGD   ++G  +  ++VA   GT  Y
Sbjct: 287 -GTPVLVNGRKVPIAGRVSMDMLTVDLGPDANDKVGDEAILWGQSLPAEEVACHIGTIAY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 346 ELVTKLTSRVEMEYS 360


>gi|262190632|ref|ZP_06048868.1| alanine racemase biosynthetic [Vibrio cholerae CT 5369-93]
 gi|20137519|sp|Q9KUY6|ALR1_VIBCH RecName: Full=Alanine racemase 1
 gi|262033497|gb|EEY51999.1| alanine racemase biosynthetic [Vibrio cholerae CT 5369-93]
          Length = 361

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 174/364 (47%), Gaps = 20/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F V  +EE ++
Sbjct: 8   INLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L+VD
Sbjct: 66  LRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLETPVMVWLKVD 124

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  DF       + + +    +SH  CAD+        Q E F +L   
Sbjct: 125 SGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQTELFLSLTQG 184

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V+T ++ +I +
Sbjct: 185 CQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPVMTLKSHLIAV 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE V YGG     RD+ I V AIGY DGYP T              G    + G 
Sbjct: 244 REVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN-----------GTPVVVNGR 292

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y+L+ ++ +R 
Sbjct: 293 RVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGYELVTKLTSRV 352

Query: 366 AKFY 369
              Y
Sbjct: 353 EMSY 356


>gi|170755879|ref|YP_001783035.1| alanine racemase [Clostridium botulinum B1 str. Okra]
 gi|169121091|gb|ACA44927.1| alanine racemase [Clostridium botulinum B1 str. Okra]
          Length = 386

 Score =  305 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLRQIKKICGNKEIIGVIKANAYGHGAMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKESIMILGYTPGALGDMLLDNDIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIKIEGLFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNEFINKLEEKNIQVPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRDN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTERESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       ++
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAEN 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|187777116|ref|ZP_02993589.1| hypothetical protein CLOSPO_00661 [Clostridium sporogenes ATCC
           15579]
 gi|187774044|gb|EDU37846.1| hypothetical protein CLOSPO_00661 [Clostridium sporogenes ATCC
           15579]
          Length = 402

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/388 (26%), Positives = 168/388 (43%), Gaps = 30/388 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++I+L  L +N   +  ++ +    +VVK +AYG G  +IA  L   G     V 
Sbjct: 5   SRPAWIEINLDNLIHNMKEIRRVAKSKEIISVVKADAYGHGASEIASLLLENGANRLAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH--------PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            + E ++LR     A I +L                + I    L   +SS       SK 
Sbjct: 65  VLSEALELRNSGITAPIIILGYTPLRYDEKTICNNAETIIKNGLEVSVSSYKYAEQLSKK 124

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               G      + +DTG  RLG    +E L+  +            + SH + AD+ +  
Sbjct: 125 AQQLGKDVKIHVNIDTGMGRLGFLPTEENLEKIYQISKLPNIIFEGLFSHFSTADEKNKD 184

Query: 174 VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
             + Q ++F       K          +A+S+ ++  P  H    RPGI+ YG       
Sbjct: 185 YTNEQFKKFLDFYYKLKDKNVKINIKHIANSAALIDLPYTHLDAIRPGIAQYGYYPSSEV 244

Query: 229 SH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           +H    ++  +T +  I+L++   +GE +SYG + +  R+S IAV  IGYADGY   LS 
Sbjct: 245 NHENINLRPTMTLKTNIVLVKDIKSGESISYGRRFRTIRNSKIAVLPIGYADGYERELSD 304

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDI 341
                        +  + G   PI+G+ITMDM M D+TD   ++VGD + + G      I
Sbjct: 305 N--------VYKTQVIVNGRRAPIVGRITMDMCMIDVTDVGDVKVGDEVILIGECNDEKI 356

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++D+A    T  Y++  RI  R  ++Y
Sbjct: 357 AVEDIADLLHTIPYEVTSRISKRIPRYY 384


>gi|322807721|emb|CBZ05296.1| alanine racemase [Clostridium botulinum H04402 065]
          Length = 386

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 175/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL  L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDNLQHNLKQIKKICGNKEIIGVIKANAYGHGAMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D N+   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGVKEPIMILGYTPWALGDMLLDNNIEQSVYSYNDALELSKIAVLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        ++  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIKIEGLFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+ ++   I+  +          +A+S+ I+   N H    R GI +YG       +  +
Sbjct: 181 QMNKYNEFINKLEEKNIQVPIKHIANSAAIIDLENTHLDAVRAGIIMYGYYPSNYVLRDN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 INLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTERESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       ++
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTFIENLKVGDVVTIMGEENGVSYTAEN 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|27379181|ref|NP_770710.1| alanine racemase [Bradyrhizobium japonicum USDA 110]
 gi|27352332|dbj|BAC49335.1| alanine racemase [Bradyrhizobium japonicum USDA 110]
          Length = 423

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 133/364 (36%), Positives = 193/364 (53%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  AAV+K +AYG G  ++A AL+ AG + FFV ++EE 
Sbjct: 33  LTVDLDAIIANWRKLEKTAVPAECAAVIKADAYGCGAAQVARALHKAGCKTFFVATIEEA 92

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
            K+R   P+  I+VL G      +     N  PVI  + +L  +       G +   A+ 
Sbjct: 93  RKVRAAVPEPTIYVLGGYFQNTGEHYAQINCRPVIGDLNELAEWDVFCRRTGWNGGAAVH 152

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL+L EA        N     ++L++SHL  A+  +S VN+ QL  FR + S
Sbjct: 153 IDTGMNRLGLTLAEAQAII-PRINAGDHGITLVMSHLVSAEQLNSPVNAKQLASFRGIAS 211

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ A+LA+SSGI LG  + F L RPG +LYG        +PMQ VV  +ARI+ IR 
Sbjct: 212 EFSGVPAALANSSGIFLGAPFQFDLVRPGAALYGVNPTPEADNPMQPVVDLKARIVQIRN 271

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YGG     R + +A+ A+GYADGY    S  D         G +  + G   
Sbjct: 272 VERGESVGYGGTWTARRPTKLAIIAVGYADGYFRAASSNDGTR------GAEVIVAGKRC 325

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P+ G+++MD+   DITD        G  + + G  I +D++A   GT  Y++L  +G RY
Sbjct: 326 PVAGRVSMDLIAIDITDLPPNAARRGHLVTLIGEGITVDELAHHFGTIGYEVLTSLGHRY 385

Query: 366 AKFY 369
           A+ Y
Sbjct: 386 ARVY 389


>gi|229519921|ref|ZP_04409352.1| alanine racemase biosynthetic [Vibrio cholerae TM 11079-80]
 gi|229343049|gb|EEO08036.1| alanine racemase biosynthetic [Vibrio cholerae TM 11079-80]
          Length = 375

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 113/374 (30%), Positives = 176/374 (47%), Gaps = 20/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +  E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 189 TELFLSLTQGCQD-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGY 356

Query: 356 DLLVRIGTRYAKFY 369
           +L+ ++ +R    Y
Sbjct: 357 ELVTKLTSRVEMSY 370


>gi|116251316|ref|YP_767154.1| alanine racemase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255964|emb|CAK07045.1| putative alanine racemase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 389

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 183/365 (50%), Positives = 246/365 (67%), Gaps = 2/365 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR +AVVK +AYG+G E    ALY AG +DFFV +V+
Sbjct: 21  LRLTVDLTALTENWRDMARRSGAARASAVVKADAYGMGIEDAGEALYMAGARDFFVATVD 80

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P+AR+FVL GI PG E+  F+ +L+PVISS  QL F+  +++    +P AL
Sbjct: 81  EGVTLRLYAPEARVFVLSGIWPGTERRFFENDLVPVISSDEQLAFWMAVLADYGDYPCAL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTGFNRLGL + +A+    +          L++SHLACADDP+  +N  QLE F  + 
Sbjct: 141 HVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSHLACADDPTHAMNRQQLESFHRVS 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG      ++PM+ V TAEARII +R
Sbjct: 201 AAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVCGMANPMRPVATAEARIIQVR 260

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE VSYG   +L R+S +A+A+ GYADGY  + S         V  GG+GFI G+ 
Sbjct: 261 SVEAGETVSYGRALQLRRESRLAIASAGYADGYMRSQSSGGVPLRQVVPQGGQGFIAGHK 320

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+ITMD+T+FDITD     +  GDY+++FG ++ +DDVA ASGT  Y++L  +G R
Sbjct: 321 VPVAGRITMDLTIFDITDLPDNAVRAGDYVELFGKNMPVDDVARASGTIGYEILTSMGLR 380

Query: 365 YAKFY 369
           + + Y
Sbjct: 381 HERRY 385


>gi|168178920|ref|ZP_02613584.1| alanine racemase [Clostridium botulinum NCTC 2916]
 gi|182669985|gb|EDT81961.1| alanine racemase [Clostridium botulinum NCTC 2916]
          Length = 386

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 175/384 (45%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +IDL +L++N   +  + GN     V+K NAYG G  +IAP L   GV  
Sbjct: 1   MFRNLRAVWAEIDLDSLQHNLKQIKKICGNKEIIGVIKANAYGHGSMEIAPTLLENGVSR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + E ++LR+   +  I +L         ++ D ++   + S       SK+    
Sbjct: 61  LAVAVLSEAMELRMSGIKEPIMILGYTPCALGDMLLDNDIEQSVYSYNDALELSKIALLK 120

Query: 120 VS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +E+++  +        Q+  + SH + AD+        
Sbjct: 121 RKILKIHIVVDTGMGRIGFLPTKESVEDVYKISKLPNIQIEGVFSHFSSADELDKDYTLY 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKS 229
           Q+  +   I+  +          +A+S+ I+   + H    R GI +YG       +  +
Sbjct: 181 QMNNYNEFINKLEEKNIQVHIKHIANSAAIIDLESTHLDAVRAGIIMYGYYPSNYVLRNN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+K  +GE +SYG   K  R+S+IA   IGYADGY   LS     
Sbjct: 241 IKLKPVMSLKTSIVHIKKVSSGEYISYGRTFKTERESIIATLPIGYADGYNRLLSN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  + G + P++G++ MD  M D+T   +++VGD + I G +       +D
Sbjct: 297 -------KGKVIVNGKLAPVIGRVCMDQCMIDVTSIENLKVGDVVTIMGQENGVSYTAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  +  R  + Y
Sbjct: 350 IASQIGTISYEVICNVNKRVPRVY 373


>gi|91227270|ref|ZP_01261695.1| alanine racemase [Vibrio alginolyticus 12G01]
 gi|91188664|gb|EAS74953.1| alanine racemase [Vibrio alginolyticus 12G01]
          Length = 358

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 178/369 (48%), Gaps = 20/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F V  +E
Sbjct: 4   AKACIDLSALQHNLQRVKAQAPQSKVMAVVKANGYGHGLRHVAKHA--NHADAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L G + PG   ++   N+  V+    QL    +           
Sbjct: 62  EALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLETPVVVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRT 184
           L++D+G +RLG+  ++  DF                +SH  CAD+  S +   Q+E F++
Sbjct: 121 LKIDSGMHRLGVRPEQYDDFVTRLKECPNVAKPLRYMSHFGCADELDSDITPQQIELFKS 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
           L S  +G E SLA+S+G+L  P  H    RPGI +YG +   +K       Q V+T ++ 
Sbjct: 181 LTSGCQG-ERSLAASAGLLAWPQSHLDWVRPGIIMYGVSPFDDKTAQDLGYQPVMTLKSH 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP +              G   +
Sbjct: 240 LIAVREVKKGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN-----------GTPVW 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y+L+ ++
Sbjct: 289 VNGRKVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVAGHIGTIAYELVTKL 348

Query: 362 GTRYAKFYT 370
             R    Y+
Sbjct: 349 TPRVEMEYS 357


>gi|224028214|dbj|BAH23434.1| alanine racemase [Pseudomonas taetrolens]
          Length = 357

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIERTQ-LHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  +              +++SH A AD+  +   + Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHEAYQRLLASGKVARIVLMSHFARADELDADATAQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAERLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++++G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGKRTQLIGRVSMDMLSIDLTDVPEATVGSPVELWGKHVLASEVAAHAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|167036307|ref|YP_001671538.1| alanine racemase [Pseudomonas putida GB-1]
 gi|166862795|gb|ABZ01203.1| alanine racemase [Pseudomonas putida GB-1]
          Length = 357

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEKTQ-LHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  D              +++SH A AD+  +   + Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMSHFARADELDADATAQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVPQAEAARLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++++G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGQRTQLIGRVSMDMLNIDLTDVPQATVGSPVELWGKQVLASEVAAQAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|66043507|ref|YP_233348.1| alanine racemase [Pseudomonas syringae pv. syringae B728a]
 gi|75503888|sp|Q4ZZW2|ALR_PSEU2 RecName: Full=Alanine racemase
 gi|63254214|gb|AAY35310.1| Alanine racemase [Pseudomonas syringae pv. syringae B728a]
 gi|330972182|gb|EGH72248.1| alanine racemase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 357

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLARESSGG-KALAVVKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A + +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH + AD+ +S  +  QL  F T
Sbjct: 120 WLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFSRADELNSGCSDEQLAVFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  +L  P      +RPGI LYG T        +  +Q V+T E++
Sbjct: 180 F-RKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V YG      R   I V A+GYADGYP                G    
Sbjct: 239 IISVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPVQ 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+T+     +G  ++++G  +   +VA  + T  Y++   +
Sbjct: 288 IDGQPSRLLGRVSMDMLCVDLTEVPQAGLGSRVELWGKQVLASEVAQRAETIPYEIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|26991945|ref|NP_747370.1| alanine racemase [Pseudomonas putida KT2440]
 gi|24987073|gb|AAN70834.1|AE016728_3 alanine racemase, catabolic [Pseudomonas putida KT2440]
          Length = 357

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 171/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEKT-PLHKPLN 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  D              ++++H A AD+  +   S Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMTHFARADELDADATSQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAARLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++ +G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGKRTQLIGRVSMDMLSIDLTDVPQATVGSPVEFWGKQVLASEVAAHAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|312876893|ref|ZP_07736869.1| alanine racemase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796304|gb|EFR12657.1| alanine racemase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 390

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 99/380 (26%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +   IDL  L  N  ++        R  AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWADIDLDNLVYNLENIKKKILPQTRIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + S+     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSQAAQKIGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLE 180
              ++VDTG  R+G     E++    N       +L  I SH + ADDP   H    Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCNESIQTVLNIAKLPNIELEGIFSHFSSADDPDSDHFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPSSSLKEHLSIK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGRQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEVVCSFSKRIPRVY 376


>gi|323496058|ref|ZP_08101118.1| alanine racemase [Vibrio sinaloensis DSM 21326]
 gi|323318802|gb|EGA71753.1| alanine racemase [Vibrio sinaloensis DSM 21326]
          Length = 359

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 110/364 (30%), Positives = 176/364 (48%), Gaps = 20/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L AL++N   +   + N++  AVVK N+YG G   IA  ++  G   F V  +EE ++
Sbjct: 8   INLDALEHNLEQIKRQAPNSKVMAVVKANSYGHGLRHIA--VHAHGADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L+VD
Sbjct: 66  LRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLAALEQ-AELETPVVVWLKVD 124

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++   F       + + +    +SH  CAD+ +    + Q E F +L   
Sbjct: 125 SGMHRLGVRPEQYNAFVSRLKACRNVAKPLRYMSHFGCADELNKPTTNEQTELFLSLTQG 184

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P       RPGI +YG +   +K         V+T ++ +I +
Sbjct: 185 CEG-ERSLAASAGLLAWPESQLDWVRPGIIMYGVSPFNDKTALQMGYLPVMTLKSHLIAV 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AGE V YGG     +D+ I V AIGY DGYP T              G   ++ G 
Sbjct: 244 RDVKAGESVGYGGTWTCEQDTKIGVIAIGYGDGYPRTAPN-----------GTPVWVNGR 292

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             PI G+++MDM   D+    +  VGD   ++G D+ +++VA   GT  Y+L+ ++ +R 
Sbjct: 293 KAPIAGRVSMDMLTVDLGPGATDRVGDEAILWGNDLPVEEVAGHIGTIAYELVTKLTSRV 352

Query: 366 AKFY 369
              Y
Sbjct: 353 EMEY 356


>gi|332970508|gb|EGK09497.1| alanine racemase [Desmospora sp. 8437]
          Length = 412

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 101/385 (26%), Positives = 168/385 (43%), Gaps = 28/385 (7%)

Query: 2   HSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
            SN + R     IDL A+ +N            R  A VK NAYG G   ++ A   AG 
Sbjct: 3   KSNRYFRDTVALIDLDAITHNVSQFRRRLPAGCRLMAAVKANAYGHGSVPVSRAALAAGA 62

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-M 116
            D  V  ++E ++LR     A I VL  I     +      +   +     +   +++  
Sbjct: 63  TDLAVAFLDEALELRAGGITAPILVLGHIPDRGIEPALKAGITLTVFDEAGVEKIAEVAA 122

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             G      ++VDTG  R+GL    A+ F           +  + +H A AD+       
Sbjct: 123 RTGRRARLHIKVDTGMGRIGLWEDAAVPFAERWARDPRVTVEGLFTHFATADEMDKSYAV 182

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q  RF  ++   +           A+S+  +  P +   + R GIS+YG       S  
Sbjct: 183 EQHGRFLRVLQQLQDRGIRIPVVHCANSAAAIDLPEWSHGMIRLGISMYGYYPSAQVSRV 242

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +T + RI+ +++  AG  +SYG    ++ +  IA   IGYADGY   LS    
Sbjct: 243 RVRLRPALTLKTRIVHLKRPPAGTGISYGKTAMVSGNQWIATLPIGYADGYSRQLSNR-- 300

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   ++G  VP++G++ MD TM D+T ++ ++VGD + ++G     +I +D
Sbjct: 301 ---------GAALVRGRRVPVIGRVCMDQTMLDVTSAMPVKVGDEVVLYGKQGNEEIHVD 351

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +VA   GT +Y++   +G R  + Y
Sbjct: 352 EVADLLGTISYEITCMLGHRVPRLY 376


>gi|148550379|ref|YP_001270481.1| alanine racemase [Pseudomonas putida F1]
 gi|148514437|gb|ABQ81297.1| alanine racemase [Pseudomonas putida F1]
          Length = 357

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A + +L G     +  +I + +L  V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGINAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEKT-PLHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  D              +++SH A AD+  +   + Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMSHFARADELDADATAQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAARLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +   +R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSSRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++++G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGKRTHLIGRVSMDMLSIDLTDVPQATVGSPVELWGKQVLASEVAAQAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|239618030|ref|YP_002941352.1| alanine racemase [Kosmotoga olearia TBF 19.5.1]
 gi|239506861|gb|ACR80348.1| alanine racemase [Kosmotoga olearia TBF 19.5.1]
          Length = 372

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 154/379 (40%), Gaps = 24/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    L+IDL A K N           +  AVVK NAYG G   I+ A   +G+    V 
Sbjct: 3   SRRTYLEIDLKAYKQNLEFFQRKVSPTKVMAVVKSNAYGHGAVGISKAAVESGIDMLAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSH 122
            +EEG++LR +     I V     P    +  + NL     S+ Q+     ++       
Sbjct: 63  FLEEGIELRNHGINVPILVFNYFDPEYSSLALENNLTITAYSIEQMKGIKSVLGNQIRKL 122

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              + VDTG  R+G S  E               +  I SH A AD+     +  Q + F
Sbjct: 123 KVHVNVDTGMKRIGPSANECTSLIEYLLE-NGFSIEGIYSHFAVADEAIEQFSIEQRKAF 181

Query: 183 RTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV- 236
            + +     KGI+     L +S+G L      +   R GI+ YG     +   P    V 
Sbjct: 182 ESAVKTLESKGIKIPVKHLCNSAGSLRFNREEYNYIRLGIASYGLQPSGDFVIPELKPVL 241

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +  ++    G+ VSYG      R  +++   +GY DGY   LS            
Sbjct: 242 TWKSAVSYVKTLKPGDSVSYGRTFIADRKMVVSTVPVGYGDGYSRGLSNR---------- 291

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD----IKLDDVALASG 351
            G+  I G    ILG++ MD  + D+T      ++GD + + G      I ++++A    
Sbjct: 292 -GEVLIGGKRCKILGRVCMDQFVVDVTHLHKKPKIGDEVVLIGSQGEERITVEEIADLLN 350

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T NY++   I  R  + YT
Sbjct: 351 TINYEITCTITARVPRLYT 369


>gi|37681162|ref|NP_935771.1| alanine racemase [Vibrio vulnificus YJ016]
 gi|81859828|sp|Q7MH94|ALR_VIBVY RecName: Full=Alanine racemase
 gi|37199913|dbj|BAC95742.1| alanine racemase [Vibrio vulnificus YJ016]
          Length = 372

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 18/374 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     IDL AL++N   +   + +++  AVVK N YG G   +A      G   F
Sbjct: 12  MNYMKAATACIDLVALQHNLQLIKQQAPHSKLMAVVKANGYGHGLRHVAKHAV--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 70  GVARIEEALQLRACGVVKPILLLEGFYSSGDLPVLVTNNIQTVVHCEEQLRDLENAELET 129

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L++D+G +RLG+  ++   F         + +    +SH  CAD+ ++ +   Q+
Sbjct: 130 PVVVWLKIDSGMHRLGVRPEQYQAFVERLHQCPNVAKPLRYMSHFGCADEMNNEMTPKQI 189

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           E F +L    KG E SLA+S+G+L       +  RPGI +YG +   +K       + V+
Sbjct: 190 ELFLSLTRGCKG-ERSLAASAGLLAWQESQLEWVRPGIIMYGVSPFGDKTASELGYKPVM 248

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +I +R   AGE V YG      RD+ + V AIGY DGYP T              
Sbjct: 249 TLKSHLIAVRDVKAGESVGYGATWISERDTKVGVIAIGYGDGYPRTAPN----------- 297

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VPI G+++MDM   D+    +  VGD   ++G D+  +DVA   GT  Y+
Sbjct: 298 GTPVLVNGRKVPIAGRVSMDMLTVDLGPDATDHVGDEAILWGADLPAEDVAQHIGTIAYE 357

Query: 357 LLVRIGTRYAKFYT 370
           L+ ++ +R    Y+
Sbjct: 358 LVTKLTSRVEMSYS 371


>gi|73763193|gb|AAZ83976.1| alanine racemase [Pseudomonas putida]
          Length = 357

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIERTQ-LHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  +              +++SH A AD+  +   + Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHEAYQRLLASGKVARIVLMSHFARADELDADATAQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAERLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++++G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGKRTQLIGRVSMDMLSIDLTDVPEATVGSPVELWGKHVLAREVAAHAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|313501244|gb|ADR62610.1| DadX [Pseudomonas putida BIRD-1]
          Length = 357

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 170/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I +  L  V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHGLWCVVHSLWQLEAIEKT-PLHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  D              +++SH A AD+  +   + Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMSHFARADELDADATAQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P       RPG+ LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAARLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     VG  ++ +G  +   +VA  +GT  Y +   
Sbjct: 287 LVAGKRTQLIGRVSMDMLSIDLTDVPQATVGSPVEFWGKQVLASEVAAHAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-KRVPRDY 354


>gi|170728531|ref|YP_001762557.1| alanine racemase [Shewanella woodyi ATCC 51908]
 gi|254802385|sp|B1KHY4|ALR_SHEWM RecName: Full=Alanine racemase
 gi|169813878|gb|ACA88462.1| alanine racemase [Shewanella woodyi ATCC 51908]
          Length = 358

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALKNN   +  ++ N+   AVVK N YG G   +A  L       F +  
Sbjct: 3   PFPRAEISAQALKNNLSRLRQIAPNSSVMAVVKANGYGHGLLNVASCLTE--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR    +A++ +L G         + +  +  VI +  QL       S      
Sbjct: 61  LEEALALRAGGVKAKLVLLEGFFRQVDLTTLVEHGIDTVIHNEVQLDMLEN-ASLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++D+G +RLG + ++            ++ +   I+SH ACAD+P + +   QL+ F
Sbjct: 120 VWLKLDSGMHRLGFTPEQFAQVYARLEACPQVAKPINIMSHFACADEPDNPMTQEQLQVF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L  + KG    LA+S+G L  P+      RPGI+LYG +     + ++H ++  +   
Sbjct: 180 EALTKNSKGYRT-LANSAGTLYWPDSQADWIRPGIALYGVSPVIGDLGRNHGLEPAMKLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R+  AG+ V YG       D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVREHKAGQPVGYGCFWHAKADTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VP++G+++MDM   D+       +GD + ++G ++ +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPVVGRVSMDMLTVDLGIDAKDSIGDDVVLWGKELPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|300782672|ref|YP_003762963.1| alanine racemase [Amycolatopsis mediterranei U32]
 gi|299792186|gb|ADJ42561.1| alanine racemase [Amycolatopsis mediterranei U32]
          Length = 371

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 22/374 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R+ IDL A+++N   + A +  +   AVVK +AYG G   +A A   AG       S
Sbjct: 6   PRARVDIDLDAIRHNLTLLGARAPGSEVMAVVKADAYGHGALPVARAAVEAGATWLGTCS 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR     AR+F              + ++    SS+ +L   S     G     
Sbjct: 66  LGEALALREAGITARLFSWLDTPDVDFAPGVENDIDLAASSLGELRRISAAAKPGTPARV 125

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R G       +    +  +   ++  I SHLACAD+P      +Q +RF  
Sbjct: 126 HLKIDTGLSRNGCPPAAWAELVEAAAAEPRVEVVAIWSHLACADEPEHPSIDLQAKRFAE 185

Query: 185 LI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                 +        LA+S+ +L  P+ HF + RPGI++YG      +   ++  +T  +
Sbjct: 186 AYDTARAAGLDPMRHLANSAALLTRPDLHFDIVRPGIAMYGLNPVP-QPEDLRPAMTFRS 244

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + L+++  AGE VSYG     +R++ +A+   GYADG P +LSG               
Sbjct: 245 AVALVKRIEAGESVSYGHTWTASRETNLALVPAGYADGVPRSLSGRMD-----------V 293

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYD 356
            + G   P+ G++ MD  + D  D     VGD + +FG     +    + A   GT +Y+
Sbjct: 294 LLGGQRRPVAGRVCMDQLVVDCGD-YEPSVGDEVVLFGAGAHGEPTAREWADKLGTIDYE 352

Query: 357 LLVRI-GTRYAKFY 369
           ++  +   R  + Y
Sbjct: 353 IVTSMYRPRVRRRY 366


>gi|308094758|ref|ZP_05891769.2| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|308095056|ref|ZP_07663149.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|308125857|ref|ZP_07663541.1| alanine racemase [Vibrio parahaemolyticus K5030]
 gi|308126480|ref|ZP_05910422.2| alanine racemase [Vibrio parahaemolyticus AQ4037]
 gi|308087451|gb|EFO37146.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|308089684|gb|EFO39379.1| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|308109426|gb|EFO46966.1| alanine racemase [Vibrio parahaemolyticus AQ4037]
 gi|308113312|gb|EFO50852.1| alanine racemase [Vibrio parahaemolyticus K5030]
          Length = 361

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 179/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 1   MSYMKAAKACIDLSALQHNLQRVKAQAPESKVMAVVKANGYGHGLRHVAKHA--NHADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  +F                +SH  CAD+  S +   Q
Sbjct: 118 TPVVVWLKIDSGMHRLGVRPEQYDEFISRLKTCPNVAKPLRYMSHFGCADELDSSITPQQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
           +E F +L S  +G E SLA+S+G+L  P    +  RPGI +YG +   +K       Q V
Sbjct: 178 IELFMSLTSGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFSDKTAQDLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+   GE V YGG     RD+ + V A+GY DGYP +             
Sbjct: 237 MTLKSHLIAVREVKQGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVWVNGRTVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVANHIGTIAY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++  R    YT
Sbjct: 346 ELVTKLTPRVEMEYT 360


>gi|145298771|ref|YP_001141612.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851543|gb|ABO89864.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 367

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 169/369 (45%), Gaps = 21/369 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M++   +   ID+ AL +N+  +   + +++  AV+K NAYG G  ++A  L       +
Sbjct: 1   MNT---VTASIDVDALHHNFAVVRRHAPHSKIIAVLKANAYGHGLLQVANTLSQ--ADAY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE + LR       I VL G    +   +   + +             +      
Sbjct: 56  GVARIEEALVLRANAITKPILVLGGFFSAEALPLLAAHDLQTTIHTWDQLALLEQADLPT 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI-ISHLACADDPSSHVNSVQL 179
                L++DTG NRLGL  Q+   F     N K        ++H + +D+  S     Q+
Sbjct: 116 PITVWLKLDTGMNRLGLRAQDIPAFVERLANCKNVVQPFHLMTHFSQSDEQDSQATPQQI 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           E F  L +  +G E ++A+S+GIL  P+      RPGI LYG +    +    H ++ V+
Sbjct: 176 EEFNALTARMQG-ERAMANSAGILAWPDSRSDWIRPGIMLYGASPFGGQLASDHDLRPVM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++++I IR    GE V YGG      D+ + V A+GY DGYP                
Sbjct: 235 TLKSQLIAIRPCEQGESVGYGGHWVAHHDTTLGVVAVGYGDGYPRMA-----------PQ 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    I G  VPI+G+++MDM   D+      + GD + ++G  + ++ VA   GT  Y+
Sbjct: 284 GTPVLINGRRVPIVGRVSMDMITVDLGPGAGDKTGDEVILWGDGLPVEQVAEKIGTIPYE 343

Query: 357 LLVRIGTRY 365
           LL R+ +R 
Sbjct: 344 LLTRLTSRV 352


>gi|78485703|ref|YP_391628.1| alanine racemase [Thiomicrospira crunogena XCL-2]
 gi|78363989|gb|ABB41954.1| alanine racemase [Thiomicrospira crunogena XCL-2]
          Length = 356

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 18/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I L AL+ N   +   + +++  A++K N YG G E++A  L       + V  
Sbjct: 4   RPVKALIHLNALQQNLRQVKTFAPDSKVLAIIKSNGYGHGIERVAGQLAQ--ADGYGVAC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E + LR       I +L G+    +  I     L   + S  QL +     S      
Sbjct: 62  IDEAIVLRQKGFLHPIVLLEGLFSEVELAIAIQHRLEFAVHSFLQLEWLKN-SSIKTPLN 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +RLG    E                  ++SH A AD+ S      QL+ F 
Sbjct: 121 IWLKLDTGMHRLGFQAHEIQKVIAELKALSAPVNIHLMSHFASADE-SESFTRQQLQVFN 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
             ++       S+A+S+ +   P  H    RPGI LYG          ++ V+T  + II
Sbjct: 180 Q-VAETLKCPRSIANSAAVQWFPESHLDWVRPGIMLYGACATSETVPGLKPVMTLMSEII 238

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            ++    GE V YG   +  R SLIAV AIGY DGYP                G    I+
Sbjct: 239 SLKWIETGETVGYGQTWQAPRRSLIAVVAIGYGDGYPRHA-----------PSGTPVLIQ 287

Query: 304 GYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           G  +P++G+++MDM   D+T+    + +GD   ++G  + +D +A A GT  Y+LL  + 
Sbjct: 288 GKKMPLVGRVSMDMITVDVTELADKVAIGDEAVLWGQGLPVDVIANACGTIGYELLCGVT 347

Query: 363 TRYAKF 368
            R  + 
Sbjct: 348 QRVPRI 353


>gi|326423831|ref|NP_760315.2| alanine racemase [Vibrio vulnificus CMCP6]
 gi|34098535|sp|Q8DCL0|ALR1_VIBVU RecName: Full=Alanine racemase 1
 gi|319999201|gb|AAO09842.2| alanine racemase [Vibrio vulnificus CMCP6]
          Length = 358

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 106/364 (29%), Positives = 171/364 (46%), Gaps = 18/364 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL AL++N   +   + +++  AVVK N YG G   +A      G   F V  +EE ++
Sbjct: 8   IDLVALQHNLQLIKQQAPHSKLMAVVKANGYGHGLRHVAKHAV--GADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G +   +  +  TN I  +    +     +           L++D+
Sbjct: 66  LRACGVVKPILLLEGFYSSGDLPVLVTNNIQTVVHCEEQLRDLENAELETPVVVWLKIDS 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++   F         + +    +SH  CAD+ ++ +   Q+E F +L    
Sbjct: 126 GMHRLGVRPEQYQAFVERLHQCPNVAKPLRYMSHFGCADEMNNEMTPKQIELFLSLTRGC 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILIR 246
           KG E SLA+S+G+L       +  RPGI +YG +   +K       + V+T ++ +I +R
Sbjct: 186 KG-ERSLAASAGLLAWQESQLEWVRPGIIMYGVSPFGDKTASELGYKPVMTLKSHLIAVR 244

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YG      RD+ + V AIGY DGYP T              G    + G  
Sbjct: 245 DVKAGESVGYGATWISERDTKVGVIAIGYGDGYPRTAPN-----------GTPVLVNGRK 293

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           VPI G+++MDM   D+    +  VGD   ++G D+  +DVA   GT  Y+L+ ++ +R  
Sbjct: 294 VPIAGRVSMDMLTVDLGPDATDHVGDEAILWGADLPAEDVAQHIGTIAYELVTKLTSRVE 353

Query: 367 KFYT 370
             Y+
Sbjct: 354 MSYS 357


>gi|330957316|gb|EGH57576.1| alanine racemase [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 357

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 162/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A  L  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLARESSGG-KALAVIKADAYGHGAVRVAQTL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELALIVEHDLWTVVHSTWQLEAIERAHPGKPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E         +       ++++H ACAD+ +S  ++ Q   F  
Sbjct: 120 WLKLDTGMHRVGLHPSEYRAAYQRLLSTGNVAKIVLMTHFACADELNSPSSAEQCAVFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEAR 241
                   E SL +S  ++  P      +R GI LYG T           +Q V+T E++
Sbjct: 180 TCQGL-AAETSLKNSPAVMGWPKIPGDWSRAGIMLYGATPFDQAQPLAERLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG      + S I V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEAVGYGATFVTDKPSRIGVVAMGYADGYPRHA-----------PTGTPVQ 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+T+     +G  ++++G  +   DVA  +GT  Y +   +
Sbjct: 288 IDGQRSRLVGRVSMDMLCVDLTELPQAGIGSRVELWGKAVLASDVAAQAGTIPYQIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRVYS 355


>gi|153840096|ref|ZP_01992763.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
 gi|149746306|gb|EDM57372.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
          Length = 361

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 109/375 (29%), Positives = 179/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 1   MSYMKAAKACIDLSALQHNLQRVKAQAPESKVMAVVKANGYGHGLRHVAKHA--NHADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  +F                +SH  CAD+  S +   Q
Sbjct: 118 TPVVVWLKIDSGMHRLGVRPEQYDEFISRLKTCPNVAKPLRYMSHFGCADELDSSITPQQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTV 235
           +E F +L S  +G E SLA+S+G+L  P    +  RPGI +YG +   +K       Q V
Sbjct: 178 IELFMSLTSGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFSDKTAQDLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+   GE V YGG     RD+ + V A+GY DGYP +             
Sbjct: 237 MTLKSHLIAVREVKKGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVWVNGRTVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVANHIGTIAY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++  R    YT
Sbjct: 346 ELVTKLTPRVEMEYT 360


>gi|218708338|ref|YP_002415959.1| alanine racemase [Vibrio splendidus LGP32]
 gi|254802395|sp|B7VI70|ALR_VIBSL RecName: Full=Alanine racemase
 gi|218321357|emb|CAV17307.1| Alanine racemase 1 [Vibrio splendidus LGP32]
          Length = 358

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 110/367 (29%), Positives = 171/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL AL++N + + + + + +  +VVK N YG G   IA    ++    F V  +E
Sbjct: 4   ATASIDLNALEHNLNQIKSKAPHCKVMSVVKANGYGHGLLHIAKHSKSS--DAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G +   +  I  TN I  +    +     +           L
Sbjct: 62  EALQLRAGGIVKPILLLEGFYSSGDLPILVTNNIQTVVHCEEQLSALENAELETPVVVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VD+G +RLG   ++  +F         + +    +SH  CAD+        Q E F +L
Sbjct: 122 KVDSGMHRLGARPEQYQNFVERLHQCANVAKPLRYMSHFGCADELDRATTVEQTELFLSL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
               +G E SLA+S+G+L  P+ H    RPGI  YG +   +K         V+T  + +
Sbjct: 182 TDGCEG-ERSLAASAGLLAWPDSHLDWVRPGIISYGVSPFADKSAQDLGFYPVMTLTSHL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YGG     RD+ + V AIGY DGYP T              G   F+
Sbjct: 241 IAVRDVKAGESVGYGGNWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVFV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+    + +VGD   ++G D+  ++VA   GT  Y+L+ ++ 
Sbjct: 290 NGRKVPIAGRVSMDMLTVDLGPDAADKVGDEATLWGKDLPSEEVAEHIGTIAYELVTKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|209693985|ref|YP_002261913.1| alanine racemase [Aliivibrio salmonicida LFI1238]
 gi|259710062|sp|B6ELK6|ALR_ALISL RecName: Full=Alanine racemase
 gi|208007936|emb|CAQ78068.1| alanine racemase [Aliivibrio salmonicida LFI1238]
          Length = 358

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 169/365 (46%), Gaps = 18/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +ID++AL +N   +   + N++  AVVK N YG G   IA      GV  F V  +EE 
Sbjct: 6   AQIDMSALAHNLQKIKQQAPNSKLLAVVKANGYGHGLLNIAKGA--HGVDAFGVARIEEA 63

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR      ++ +L G +   +  I   N I       +     +           L+V
Sbjct: 64  LQLRAGGIVKQVLLLEGFYSAGDLPILVANNIQTAVHCKEQLEALENADLEGPVVVWLKV 123

Query: 129 DTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           D+G +RLG+  +E  ++       K + Q    +SH  CAD+  +   + Q+E F +L  
Sbjct: 124 DSGMHRLGIRPEEYQEYVDRLHACKNVAQPLRYMSHFGCADELDNPTTNEQIETFMSLTD 183

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
             +G E SLA+S+G+L  P+      RPGI +YG +    K          +T  + +I 
Sbjct: 184 GCQG-ERSLAASAGLLAWPDSQLDWVRPGIIMYGVSPFSEKTAQDLGYLPTMTLTSHLIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  AGE V YG      RD+ I V AIGY DGYP+               G    + G
Sbjct: 243 VREVKAGESVGYGAMWTSERDTKIGVIAIGYGDGYPIAAPN-----------GTPVLVNG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             VP+ G+++MDM   D+       VGD   ++G D+  ++VA   GT  Y+L+ ++ +R
Sbjct: 292 RKVPVAGRVSMDMLTVDLGPDAEDNVGDEAILWGRDLPAEEVAEHIGTIAYELVTKLTSR 351

Query: 365 YAKFY 369
               Y
Sbjct: 352 VQMQY 356


>gi|262172532|ref|ZP_06040210.1| alanine racemase biosynthetic [Vibrio mimicus MB-451]
 gi|261893608|gb|EEY39594.1| alanine racemase biosynthetic [Vibrio mimicus MB-451]
          Length = 364

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 180/375 (48%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + +++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLDALQHNLQRVKQQAPHSKIMAVVKANGYGHGLRHIARYAI--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF +       + +    +SH  CAD+      + Q
Sbjct: 118 TPVMVWLKVDSGMHRLGVRPEQYRDFVNRLHQCANVAKPLRYMSHFGCADELDKSTTAEQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V
Sbjct: 178 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAEELGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 237 MTLKSHVIAVREVKAGESVGYGGIWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+    +  VGD   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPEATDCVGDEAMLWGRELPVEEVAAHIGTLGY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 346 ELVTKLTSRVEMSYS 360


>gi|261210391|ref|ZP_05924685.1| alanine racemase biosynthetic [Vibrio sp. RC341]
 gi|260840449|gb|EEX67015.1| alanine racemase biosynthetic [Vibrio sp. RC341]
          Length = 364

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 178/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + +++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLDALQHNLQRVKQQAPDSKIMAVVKANGYGHGLRHIARYAM--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQTQ-LE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG+  ++  DF         + +    +SH  CAD+      + Q
Sbjct: 118 TPVMVWLKIDSGMHRLGVRPEQYQDFVTRLHQCDNVAKPLRYMSHFGCADELDKSTTAAQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V
Sbjct: 178 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAAQLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R   AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 237 MTLKSHLIAVRDVKAGESVGYGGTWISQRDTKIGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+    S  VGD   ++G ++ +++VA   GT  Y
Sbjct: 287 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPEASDCVGDEAMLWGGELPVEEVAAHIGTLGY 345

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 346 ELVTKLTSRVEMSYS 360


>gi|330977319|gb|EGH77272.1| alanine racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 357

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 165/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  +    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLARENSGG-KALAVVKADAYGHGAVRVAQAL-ESQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A + +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHDLWTVVHATWQLEAIEQARLGKPITV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH + AD+ +S  +  QL  F T
Sbjct: 120 WLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHSSRADELNSGCSDEQLAVFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  +L  P      +RPGI LYG T        +  +Q V+T E++
Sbjct: 180 F-RKGLAAETSLKTSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+  AGE V YG      R S I V A+GYADGYP                G    
Sbjct: 239 IISVRELPAGEPVGYGATFVCDRPSRIGVVAMGYADGYPRHA-----------PTGTPVQ 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  + T  Y++   +
Sbjct: 288 IDGQPSRLLGRVSMDMLCVDLTDVPQAGLGSRVELWGKQVLASEVAQRAETIPYEIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|28212093|ref|NP_783037.1| alanine racemase [Clostridium tetani E88]
 gi|81841128|sp|Q890X1|ALR_CLOTE RecName: Full=Alanine racemase
 gi|28204536|gb|AAO36974.1| alanine racemase [Clostridium tetani E88]
          Length = 387

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 25/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +IDL  L  N   +  +       AVVK +AYG G   IAP L   G   
Sbjct: 1   MFKHLRPVWAEIDLDKLVYNMQQIKNICKGREIIAVVKADAYGHGALDIAPILLENGATR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V  + E ++LR     A I VL        +     N+   + S       S++    
Sbjct: 61  LAVAVLNEAIELRRGGIDAPIMVLGFTPDSLIETSLKYNIEQTVYSYEIAKEISEVAVKS 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + +DTG  R+G     E++D  +        Q+  I SH A AD+       +
Sbjct: 121 NRVAKIHIALDTGMGRIGFLPDKESIDKIYKLSKLPNIQIEGIFSHFASADEQDKTYTKL 180

Query: 178 QLERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP- 231
           Q  +F  + +    +GI+     +A+S+ I+  P  H +  RPGI +YG       +   
Sbjct: 181 QFNKFLWVCNSLEERGIDIKIRHIANSAAIIDMPELHLEGVRPGIIMYGYYPSSEVNKGK 240

Query: 232 --MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +  I+ I+    G+ +SYG + K  ++S+IA   +GYADGY  +L      
Sbjct: 241 LDLKPVMSLKTTIVHIKNMEKGKYISYGREFKTEKESIIATLPVGYADGYSRSL------ 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  GGK  +K  + P++G+I MD  M D++    +++GD + + G +    +  ++
Sbjct: 295 ----YDKGGKIILKEQLAPLVGRICMDQCMIDVSHIEDVKIGDEVILMGENKGIKMTAEE 350

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +    GT NY++   I  R  + Y
Sbjct: 351 IGNLLGTINYEVTCMISKRVPRVY 374


>gi|148981621|ref|ZP_01816478.1| alanine racemase [Vibrionales bacterium SWAT-3]
 gi|145960806|gb|EDK26141.1| alanine racemase [Vibrionales bacterium SWAT-3]
          Length = 358

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 114/368 (30%), Positives = 175/368 (47%), Gaps = 20/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL+AL++N   + + +   +  +VVK N YG G   IA    N+    F V  +E
Sbjct: 4   ATASIDLSALEHNLRQIKSKAPQCKVMSVVKANGYGHGLLHIAKHSKNS--DAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       + +L G + PG   I+   N+  V+    QL+               
Sbjct: 62  EALQLRAGGIVQPVLLLEGFYSPGDLPILVTNNIQTVVHCEEQLSALEN-SVLESPVVVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L+VD+G +RLG+  ++  DF         + +    +SH  CAD+        Q E F +
Sbjct: 121 LKVDSGMHRLGVRSEQYKDFVERLHQCPNVAKPLRYMSHFGCADELDRTTTVEQTELFLS 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L    +G E SLA+S+G+L  P+ H    RPGI  YG +  ++KS        V+T  + 
Sbjct: 181 LTDGCEG-ERSLAASAGLLAWPDSHLDWVRPGIISYGVSPFVDKSAQELGFMPVMTLTSH 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V AIGY DGYP T              G   F
Sbjct: 240 LIAVRDVKAGESVGYGGNWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVF 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI G+++MDM   D+      +VGD   ++G ++  ++VA   GT  Y+L+ ++
Sbjct: 289 VNGRKVPIAGRVSMDMLTVDLGPDAQDKVGDEATLWGKELPSEEVAEHIGTIAYELVTKL 348

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 349 TSRVAMEY 356


>gi|110802018|ref|YP_698177.1| alanine racemase [Clostridium perfringens SM101]
 gi|123146221|sp|Q0SUN0|ALR_CLOPS RecName: Full=Alanine racemase
 gi|110682519|gb|ABG85889.1| alanine racemase [Clostridium perfringens SM101]
          Length = 386

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVVGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TNFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMVDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|187933435|ref|YP_001885767.1| alanine racemase [Clostridium botulinum B str. Eklund 17B]
 gi|187721588|gb|ACD22809.1| alanine racemase [Clostridium botulinum B str. Eklund 17B]
          Length = 386

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 157/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL A+  N  ++  L+ N    AVVK + YG G   + P L   G     V  
Sbjct: 6   RPVWAEIDLDAIAYNMRNIKKLAQNKDVIAVVKADCYGHGALDVVPTLLENGASRLAVAV 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           + E ++LR     A I +L        + + + ++   +  +      S L         
Sbjct: 66  LTEAIELRNNNITAPIMILGYTPEYLFEEVVNYDIEQTVYDLEYAKKLSHLAIKFNKKAK 125

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    E A+      +N K   +  I +H + +D+      + Q  +F
Sbjct: 126 VHIAIDTGMGRIGFIPNEKAIKDIKKIYNLKGLDVIGIFTHFSTSDETDKEYTNEQFNKF 185

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            + I     +        +++S  I+  P  +    R GI LYG       +        
Sbjct: 186 TSFIDMLSKVGVKIPIKHISNSGAIIDMPKTYLDSVRAGIILYGYYPSDEINKDNIKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +A +  +++      +SYG   K  R S+IA   IGYADGY   L           
Sbjct: 246 ALTLKASLTRVQELDINSYISYGKTFKTERKSIIATLPIGYADGYSRLL----------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
             G K  I G   PI+G+I MD  M D+TD   I VGD + I G D    +  +D+A + 
Sbjct: 295 APGAKVIINGKFSPIIGRICMDQCMIDVTDIDDIHVGDEVIILGEDGNLKLTANDLAKSM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  +  R  + Y
Sbjct: 355 GTINYEILCMLKYRIPRVY 373


>gi|251780841|ref|ZP_04823761.1| alanine racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085156|gb|EES51046.1| alanine racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 386

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 157/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL A+  N  ++  L+ N    AVVK + YG G   + P L   G     V  
Sbjct: 6   RPVWAEIDLDAIAYNMKNIKKLAQNKDVIAVVKADCYGHGALDVVPTLLENGASRLAVAV 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           + E ++LR     A I +L        + + + ++   +  +      S L         
Sbjct: 66  LTEAIELRNNNVTAPIMILGYTPEYLFEEVVNYDIEQTVYDLEYAKKLSHLAIKFNKKAK 125

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    E A+      +N K   +  I +H + +D+      + Q  +F
Sbjct: 126 IHIAIDTGMGRIGFIPNEKAIKDIKKIYNLKGLDVIGIFTHFSTSDETDKEYTNEQFNKF 185

Query: 183 RTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            + I     +   +      +S  I+  P  +    R GI LYG       +        
Sbjct: 186 TSFIDMLSKVGVKIPIKHTSNSGAIIDLPKTYLDSVRAGIILYGYYPSDEINKDNIKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +A +  +++      +SYG   K  R S+IA   IGYADGY   L           
Sbjct: 246 ALTLKASLTRVQELDINSYISYGKTFKTERKSIIATLPIGYADGYSRLL----------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
             G K  I G   PI+G+I MD  M D+TD  ++ VGD + I G D    +  +D+A + 
Sbjct: 295 APGAKVIINGQFAPIVGRICMDQCMIDVTDIDNVNVGDEVIILGEDGNLKLTANDLANSM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  +  R  + Y
Sbjct: 355 GTINYEILCMLKYRIPRVY 373


>gi|86148219|ref|ZP_01066516.1| alanine racemase [Vibrio sp. MED222]
 gi|85833989|gb|EAQ52150.1| alanine racemase [Vibrio sp. MED222]
          Length = 358

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 110/367 (29%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL AL++N + + + + + +  +VVK N YG G + IA    ++    F V  +E
Sbjct: 4   ATASIDLNALEHNLNQIKSKAPHCKVMSVVKANGYGHGLQHIAKHSKSS--DAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G +   +  I  TN I  +    +     +           L
Sbjct: 62  EALQLRAGGIVKPILLLEGFYSSGDLPILVTNNIQTVVHCEEQLSALENAELETPVVVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VD+G +RLG   ++  +F         + +    +SH  CAD+        Q E F +L
Sbjct: 122 KVDSGMHRLGARPEQYQNFVERLHQCANVAKPLRYMSHFGCADELDRATTVEQTELFLSL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
               +G E SLA+S+G+L  P+ H    RPGI  YG +   +K         V+T  + +
Sbjct: 182 TDGCEG-ERSLAASAGLLAWPDSHLDWVRPGIISYGVSPFADKSAQDLGFYPVMTLTSHL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YGG     RD+ + V AIGY DGYP T              G   F+
Sbjct: 241 IAVRDVKAGESVGYGGNWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVFV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+    + +VGD   ++G D+  ++VA   GT  Y+L+ ++ 
Sbjct: 290 NGRKVPIAGRVSMDMLTVDLGPDAADKVGDEATLWGKDLPSEEVAEHIGTIAYELVTKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|258622401|ref|ZP_05717424.1| alanine racemase [Vibrio mimicus VM573]
 gi|258585315|gb|EEW10041.1| alanine racemase [Vibrio mimicus VM573]
          Length = 375

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 179/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + +++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLDALQHNLQRVKQQAPHSKIMAVVKANGYGHGLRHIARYAI--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF +       + +    +SH  CAD+        Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYRDFVNRLHQCANVAKPLRYMSHFGCADELDKSTTEEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAEELGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGIWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+    +  VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVNGRRVPIAGRVSMDMLTVDLGPEATDCVGDEAMLWGRELPVEEVAAHIGTLGY 356

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 357 ELVTKLTSRVEMSYS 371


>gi|308271849|emb|CBX28457.1| Alanine racemase [uncultured Desulfobacterium sp.]
          Length = 386

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 100/394 (25%), Positives = 164/394 (41%), Gaps = 38/394 (9%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++  +  +IDL A+ +N   +  +   ++R  AVVK NAYG G  ++A    + G +   
Sbjct: 2   ADNIIWAEIDLKAIAHNLSELRRIINPDSRLMAVVKANAYGHGSVEVARCALDNGAEYLG 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
           V  +EE + LR     A I +     P   + I   NL+  + S       S    S   
Sbjct: 62  VARIEEAMLLRKNNIDAPILIFGFTQPDSYENILKYNLVQTVCSYAFAESLSSFAISKNQ 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDF-------------THNSFNKKLGQLSLIISHLACA 167
                +++DTG  R+G+      ++               +  +    +   I +H + A
Sbjct: 122 KIKVHIKIDTGMGRIGVLPDCFRNYNKNGIKPVSALAEVESIASLSGIEAEGIYTHFSMA 181

Query: 168 DDPSSHVNSVQLERFRTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGG 222
           D       + Q E F   IS    KGIE  L    +S+ I+  P  H  + R GIS+YG 
Sbjct: 182 DSYDKSFTTKQFEIFMEFISNLKLKGIEFKLKHAANSAAIIDIPKTHLDMVRAGISMYGL 241

Query: 223 TDKINKSHPMQ---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
                 +         ++ +A +  ++    G  VSYG   K T  + IA   +GYADGY
Sbjct: 242 YPSEEVNKDRVSLLPAMSLKAIVTQVKNVSCGFNVSYGATYKTTAPTTIATVPVGYADGY 301

Query: 280 PLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP 339
              LS             G   + G   PI G++ MD+TM D+     ++ GD + +FG 
Sbjct: 302 SRLLSSR-----------GHMLVHGQKAPIAGRVCMDLTMLDVGSITEVKQGDEVVVFGK 350

Query: 340 D----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                + +D++A    T NY+++  I  R  + Y
Sbjct: 351 QNGSCVTVDEIATLINTINYEIVTLISERVKRVY 384


>gi|121535443|ref|ZP_01667253.1| alanine racemase [Thermosinus carboxydivorans Nor1]
 gi|121305952|gb|EAX46884.1| alanine racemase [Thermosinus carboxydivorans Nor1]
          Length = 413

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 104/378 (27%), Positives = 167/378 (44%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +++DL A+++N   +   L  + R  AVVK NAYG G   ++ A   AG     V 
Sbjct: 40  RPTHVQVDLGAIRHNIIQIRRRLKPSTRLTAVVKANAYGHGAIPVSRAALAAGADSLAVA 99

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
             EEGV+LR       I VL    P Q  ++ + +L   + +   L   +    C G   
Sbjct: 100 LPEEGVELRDAGFTVPILVLGLTLPEQASVLVEYDLTATVCTEDGLKALAHAARCAGKRA 159

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++ DTG  R+GL+  + L F   +      +L  + +HLA AD         QL  F
Sbjct: 160 RVMVKADTGMGRIGLTSDKLLPFLTAAAAMPEIELRGLFTHLATADAADKSYARRQLAAF 219

Query: 183 RTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
             ++         L      +S+ ++   + HF   RPGI++YG    +   +S  ++  
Sbjct: 220 TAILDQAAAAGILLPYISAANSATVIDIVDGHFNTVRPGIAIYGLPPSLEMHQSLDLRPA 279

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  + RI+ I++  AG  VSYG      + + +A   +GYADGY   LS           
Sbjct: 280 MEFKTRIVYIKEVPAGFAVSYGCTYVTPQATFLATLPVGYADGYSRHLSN---------- 329

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
                 I G   P++G+I MD T+ D+       VGD   +FG     +I + ++A  +G
Sbjct: 330 -KACVLIGGKRRPVVGRICMDQTIVDLGPVCDAAVGDEAVLFGRQGDAEITVTELAELAG 388

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+L+  I  R  + Y
Sbjct: 389 TINYELVCGISGRVPRLY 406


>gi|73490247|dbj|BAE19803.1| alanine racemase [Pseudomonas fluorescens]
          Length = 357

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREVTG-AKALAVIKADAYGHGAVRCAEALQET-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +  I +L G     E  +I + +   V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGIRGPILLLEGFFEADELPLIVEHDFWCVVHSLWQLEAIEKAALS-QPIT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL   +                 +++SH A AD+     ++ QL  F 
Sbjct: 119 VWLKLDSGMHRVGLHPADYQAAYRRLLASGKVAKIVLMSHFARADELHDSSSTEQLAIFD 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
                    + SL +S  +L  P       RPGI LYG T     +     +Q V+T E+
Sbjct: 179 KARQGLVA-QISLRNSPAVLGWPQIPSDWVRPGIMLYGATPFDEPNAVASRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG +   T+ + + V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEPVGYGARFVTTQPTRVGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            ++G    ++G+++MDM   D+T      +G  ++++G +I   DVA A+ T  Y +   
Sbjct: 287 LVEGQRSQLVGRVSMDMLAVDLTHIPQAGLGSTVELWGKNILASDVAKAADTIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRLYS 355


>gi|330964276|gb|EGH64536.1| alanine racemase [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 357

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYRLARDSSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRTAGIRAPILLLEGFFEADELALIVEHDLWTVVHAVWQLEAIEQAQPGKPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH +CAD+ +S  +  Q+  F  
Sbjct: 120 WLKLDTGMHRVGLHPCEYRAAYQRLLATGKVARVVLMSHFSCADELNSACSDQQVAVFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                   E SL +S  ++  P  H   +R GI LYG T           +Q V+T E++
Sbjct: 180 ARQGLVA-EISLKNSPAVMGWPKIHSDWSRTGIMLYGATPFDQAQPLAKRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG      R   I   A+GYADGYP                G    
Sbjct: 239 VISVRELPAGEAVGYGATFVSERPLRIGAVAMGYADGYPRHA-----------PTGTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  +GT  Y +   +
Sbjct: 288 IDGQRSRLLGRVSMDMLCIDLTDLPQAGLGSRVELWGKGVLASEVATQAGTIPYQIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|168207630|ref|ZP_02633635.1| alanine racemase [Clostridium perfringens E str. JGS1987]
 gi|168209161|ref|ZP_02634786.1| alanine racemase [Clostridium perfringens B str. ATCC 3626]
 gi|168216261|ref|ZP_02641886.1| alanine racemase [Clostridium perfringens NCTC 8239]
 gi|170661037|gb|EDT13720.1| alanine racemase [Clostridium perfringens E str. JGS1987]
 gi|170712680|gb|EDT24862.1| alanine racemase [Clostridium perfringens B str. ATCC 3626]
 gi|182381967|gb|EDT79446.1| alanine racemase [Clostridium perfringens NCTC 8239]
          Length = 386

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVVGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|94971247|ref|YP_593295.1| alanine racemase [Candidatus Koribacter versatilis Ellin345]
 gi|94553297|gb|ABF43221.1| alanine racemase [Candidatus Koribacter versatilis Ellin345]
          Length = 411

 Score =  301 bits (772), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 97/387 (25%), Positives = 183/387 (47%), Gaps = 33/387 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                ++DL+AL++N+ ++++  +  A+  AVVK +AYG G  + A AL   G + F VT
Sbjct: 29  RPTWAEVDLSALRHNYRTLSSHVAPKAQICAVVKCDAYGHGALECAQALEAEGAKWFGVT 88

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
           +  E + LR    + RI +L G   G+E+ + + +  P + +   + +   +        
Sbjct: 89  NPSEALVLRRGGIKGRILLLSGFWQGEEESVLEHDFTPAVWTEGHVAWLDAAAKRFGRTK 148

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  L++DTG +RLG+   E        F  +   +  + SHLA ++   +     Q+  
Sbjct: 149 VPVHLKIDTGMSRLGVRWNELPTLLPKLFRARRLSIEGVWSHLASSEVVDAFDAQAQIAN 208

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG----------TDKI 226
           F   +        K     LA+S+ + + P+  + + RPG+ LYG           +  +
Sbjct: 209 FEQALTYLADEGVKWKYRHLANSAAVAVRPSTWYDMVRPGLLLYGHCLPLTHTNHVSPDV 268

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           +    ++ V++ + R++ IR+  AG+ V YG      + SL+A   +GY DGY   LS  
Sbjct: 269 HLQLALKPVLSWKTRVVDIRRVPAGQGVGYGSTFTTRKPSLLATIPVGYGDGYLRALSN- 327

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                      G+  ++G   PI G ++MD+T+ D++    + VGD + + G D    I+
Sbjct: 328 ----------KGRALVRGEYAPIAGNVSMDLTIIDVSRIPGVAVGDEVTLIGRDGEKSIE 377

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           ++++A    +  Y+++  I  R  + Y
Sbjct: 378 IEELARHYQSIAYEVMCGISKRVPRKY 404


>gi|18309850|ref|NP_561784.1| alanine racemase [Clostridium perfringens str. 13]
 gi|20531981|sp|Q8XM22|ALR_CLOPE RecName: Full=Alanine racemase
 gi|18144528|dbj|BAB80574.1| alanine racemase [Clostridium perfringens str. 13]
          Length = 386

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVIGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|110798951|ref|YP_695311.1| alanine racemase [Clostridium perfringens ATCC 13124]
 gi|123148891|sp|Q0TSS9|ALR_CLOP1 RecName: Full=Alanine racemase
 gi|110673598|gb|ABG82585.1| alanine racemase [Clostridium perfringens ATCC 13124]
          Length = 386

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 VHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVIGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|300856377|ref|YP_003781361.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
 gi|300436492|gb|ADK16259.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
          Length = 388

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 101/380 (26%), Positives = 175/380 (46%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +I+L  L  N   +    GN +    VVK NAYG G  +++  L   GV    V+
Sbjct: 6   RPVWEEINLDNLVYNIRQIKLKVGNNKGLIGVVKANAYGHGALEVSQVLLENGVNRLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++E ++LR    +A I +L  +       I D N+ PV+ S    +  SK+  +   + 
Sbjct: 66  ELDEAIELRENGIKAPIMILGIVPDTFLNDIIDYNVEPVVPSYEYASKLSKVAKNKWKTA 125

Query: 123 PYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              + VDTG  R+G    E +++  +N       ++  + SH + +D+     +  Q E+
Sbjct: 126 KIHVAVDTGMGRIGFQPNENSIEEIYNISKLPNIEIQSLFSHFSTSDEKDKTYSQEQFEK 185

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           ++T  +     +       +A+S+ I+   + +    RPGI +YG     +       ++
Sbjct: 186 YKTFYNELINRKIKISMRDIANSAAIMELQDTYCDAVRPGIIIYGYYPSDDVDRNDLSIK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +A++  ++   AG+ V YG + K  R S+IA   IGYADGY   LSG        
Sbjct: 246 PVMSLKAKVAYVKTLEAGKYVGYGRKFKSERKSVIATLPIGYADGYTRMLSG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALA 349
                K  + G   P++G I MD  M D+TD+  + VGD + + G         +D+A  
Sbjct: 298 ---KAKVIVNGKFAPVVGNICMDQCMIDVTDAGEVNVGDEVILMGEKNGLKFDAEDIAKT 354

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++L  I  R  + Y
Sbjct: 355 IGTISYEILCSISRRVPRVY 374


>gi|188590505|ref|YP_001920878.1| alanine racemase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500786|gb|ACD53922.1| alanine racemase [Clostridium botulinum E3 str. Alaska E43]
          Length = 386

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 96/379 (25%), Positives = 158/379 (41%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL A+  N  ++  L+ N    AVVK + YG G   + P L   G     V  
Sbjct: 6   RPVWAEIDLDAIAYNMKNIKKLAQNKDVIAVVKADCYGHGALDVVPTLLENGASRLAVAV 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           + E ++LR     A I +L        + + + ++   +  +      S L         
Sbjct: 66  LTEAIELRNNNVNAPIMILGYTPEYLFEEVVNYDIEQTVYDLEYAKKLSHLAIKFNKKAK 125

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    E A+      ++ K   +  I +H + +D+      + Q  +F
Sbjct: 126 IHIAIDTGMGRIGFIPNEKAIKDIKEIYDLKGIDVIGIFTHFSTSDETDKEYTNEQFNKF 185

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            + I     +        +++S  I+  P  +    R GI LYG       +        
Sbjct: 186 TSFIDMLSKVGVKIPIKHISNSGAIIDLPKTYLDSVRAGIILYGYYPSDEINKDNIKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +A +  +++      +SYG   K  R S+IA   IGYADGY   L           
Sbjct: 246 ALTLKASLTRVQELDINSYISYGKTFKTERKSIIATLPIGYADGYSRLL----------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
             G K  I G   PI+G+I MD  M D+TD  ++ VGD + I G D    +  +D+A + 
Sbjct: 295 APGAKVIINGQFAPIVGRICMDQCMIDVTDIDNVNVGDEVIILGEDDNLKLTANDLANSM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  +  R  + Y
Sbjct: 355 GTINYEILCMLKYRIPRVY 373


>gi|312881940|ref|ZP_07741697.1| alanine racemase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370376|gb|EFP97871.1| alanine racemase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 360

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 173/368 (47%), Gaps = 18/368 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL ALK+N   +   + N++  AVVK N+YG G   +A          F V  +E
Sbjct: 4   ATAHIDLEALKHNLGRVKQQAPNSKVMAVVKANSYGHGLHYVAQHASA--ADAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G +  ++  +  TN I  +    +  +  +  S        L
Sbjct: 62  EALQLRASGVVKPILLLEGFYSSRDLPVLVTNSIHTVVHCEEQLYDLEKASLENPVVVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++D+G +RLG+  +    F       K + +    +SH  CAD+    +   Q+E F +L
Sbjct: 122 KIDSGMHRLGVRPEHFEHFVERLEACKNVAKPLRYMSHFGCADELDKPITQKQIELFLSL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
                G E SLA+S+G+L  P+   +  RPGI LYG +   NK       + V+T ++ +
Sbjct: 182 TKGCLG-ERSLANSAGVLAWPDSQLEWVRPGIILYGVSPLPNKTATDLGFKPVMTLKSHL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   +GE V YGG     RD+ + V AIGY DGYP                G    +
Sbjct: 241 IAVRTVKSGESVGYGGNWTSDRDTKVGVIAIGYGDGYPRMAPN-----------GTPVLV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VP+ G+++MDM   D+      +VGD   ++G  + +++VA   GT  Y+L+ ++ 
Sbjct: 290 NGRKVPMAGRVSMDMLTVDLGPDAKDKVGDEAILWGNGLDVEEVAHHIGTIAYELVTKLT 349

Query: 363 TRYAKFYT 370
           +R    Y+
Sbjct: 350 SRVDMEYS 357


>gi|28899508|ref|NP_799113.1| alanine racemase [Vibrio parahaemolyticus RIMD 2210633]
 gi|34098474|sp|Q87L78|ALR1_VIBPA RecName: Full=Alanine racemase 1
 gi|28807744|dbj|BAC60997.1| alanine racemase, biosynthetic [Vibrio parahaemolyticus RIMD
           2210633]
          Length = 358

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 20/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F V  +E
Sbjct: 4   AKACIDLSALQHNLQRVKAQAPESKVMAVVKANGYGHGLRHVAKHA--NHADAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L G + PG   ++   N+  V+    QL    +           
Sbjct: 62  EALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLETPVVVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRT 184
           L++D+G +RLG+  ++  +F                +SH  CAD+  S +   Q+E F +
Sbjct: 121 LKIDSGMHRLGVRPEQYDEFISRLKTCPNVAKPLRYMSHFGCADELDSSITPQQIELFMS 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
           L S  +G E SLA+S+G+L  P    +  RPGI +YG +   +K       Q V+T ++ 
Sbjct: 181 LTSGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFSDKTAQDLGYQPVMTLKSH 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP +              G   +
Sbjct: 240 LIAVREVKQGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN-----------GTPVW 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y+L+ ++
Sbjct: 289 VNGRTVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVANHIGTIAYELVTKL 348

Query: 362 GTRYAKFYT 370
             R    YT
Sbjct: 349 TPRVEMEYT 357


>gi|89896768|ref|YP_520255.1| hypothetical protein DSY4022 [Desulfitobacterium hafniense Y51]
 gi|219667399|ref|YP_002457834.1| alanine racemase [Desulfitobacterium hafniense DCB-2]
 gi|89336216|dbj|BAE85811.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537659|gb|ACL19398.1| alanine racemase [Desulfitobacterium hafniense DCB-2]
          Length = 370

 Score =  301 bits (772), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 94/381 (24%), Positives = 166/381 (43%), Gaps = 25/381 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +   +  +I+L AL+ N+  + AL+  +    +VK +AYG G  +   A Y  G + F
Sbjct: 1   MENRRPVWTEINLQALQRNYDRIQALT-ESEIMPIVKADAYGHGALQAVEAFYERGARRF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V  + E ++LR   P  ++ ++  +     + +   ++I  +  + Q    +K     G
Sbjct: 60  GVALLNEALELRRAYPDIKVMLIGSLPEESIETVVKEDIICGVYQLDQAVILAKEAERQG 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VDTG  R+G   ++  +    +       +  I +H A AD         QL
Sbjct: 120 KKAVIHLKVDTGMGRIGFREEDWEELFGCT-KLPGLYIEGIYTHFATADHSDLRFAREQL 178

Query: 180 ERFRTLISHY--KGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTD--KINKSHPM 232
            +F  +      +GI   +  ++     L  P  H  + RPGI LYG      +     +
Sbjct: 179 RKFLVMCDKIKAQGIHIPIRHAANSGALLQLPEAHLDMVRPGIILYGLPPSQHVGNDLGL 238

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ +A+I  I+    GE +SYG   +    + +A   +GYADG    LS        
Sbjct: 239 EPVLSWKAKISHIKVVPQGETISYGRTFRTAYPTRVATIPLGYADGLRRNLSN------- 291

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                G+  IKG    ++G++ MD TM D+T    ++VGD + + G      I   ++A 
Sbjct: 292 ----KGEVLIKGRRTTMIGRVCMDQTMLDVTKIPEVQVGDVVTLLGMDGYERIDATEMAG 347

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY+++  I  R  + Y
Sbjct: 348 WLDTINYEIVCGISKRVPRVY 368


>gi|330876475|gb|EGH10624.1| alanine racemase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 355

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 162/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYRLARDSSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELALIVEHDLWTVVHAIWQLGAIEQAQPGKPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH +CAD+ +S  +  Q+  F  
Sbjct: 120 WLKLDTGMHRVGLHPSEYRAAYQRLLATGKVARVVLMSHFSCADELNSACSDQQVAVFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEAR 241
                   E SL +S  ++  P  H   +R GI LYG T           +Q V+T E++
Sbjct: 180 ARQGLVA-ETSLKNSPAVMGWPKIHSDWSRTGIMLYGATPFDQAQPLAERLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AG+ + YG      R   I   A+GYADGYP                G    
Sbjct: 239 VISVRELPAGDALGYGATFVSERPLRIGAVAMGYADGYPRHA-----------PTGTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  +GT  Y +   +
Sbjct: 288 IDGQRSRLLGRVSMDMLCVDLTDLPQAGLGSRVELWGKGVLASEVATQAGTIPYQIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|295402565|ref|ZP_06812514.1| alanine racemase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294975413|gb|EFG51042.1| alanine racemase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 381

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 147/375 (39%), Gaps = 26/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A+  N   +   L  + R  AVVK NAYG G  ++A     AG     V  +
Sbjct: 6   TWAEIDLDAIYYNVSQLKNFLPNDVRIMAVVKANAYGHGDVQVAKTALEAGASYLAVAFL 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I VL    P    I     +   +     +   +   S      + 
Sbjct: 66  DEALALRKGGIDAPILVLGASRPSDINIAAKHRITLTVFQAEWIEQAADFYSETAPVLFH 125

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L++DTG  RLG+  + E               L  + +H A AD+ ++   S Q + F  
Sbjct: 126 LKMDTGMGRLGVKEETETKRLIEQIDRHPYFSLEGVYTHFATADEINTGYFSFQYDNFLR 185

Query: 185 LISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV----TA 238
           ++             +S+  L  P+  F + R GIS+YG +        +   +    + 
Sbjct: 186 MLEWLPYKPPLIHCGNSATTLRFPDKVFNMVRFGISMYGLSPSPEIKQYLPYTLKEAFSL 245

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +R++ ++K   GE VSYG       +  +    IGYADG+   L               
Sbjct: 246 HSRLVHVKKLKPGEKVSYGATYTAETEQWVGTVPIGYADGWLRKLQNF------------ 293

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    T N
Sbjct: 294 HVLVNGEKAPIIGRICMDQLMVRLPKQLPV--GTKVTLIGRQGDKYISVDDVAQYLDTIN 351

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   I  R  + +
Sbjct: 352 YEIPCTISYRVPRIF 366


>gi|328472359|gb|EGF43229.1| alanine racemase [Vibrio parahaemolyticus 10329]
          Length = 358

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 108/369 (29%), Positives = 177/369 (47%), Gaps = 20/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F V  +E
Sbjct: 4   AKACIDLSALQHNLQRVKAQAPESKVMAVVKANGYGHGLRHVAKHA--NHADAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L G + PG   ++   N+  V+    QL    +           
Sbjct: 62  EALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ-ADLETPVVVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRT 184
           L++D+G +RLG+  ++  +F                +SH  CAD+  S +   Q+E F +
Sbjct: 121 LKIDSGMHRLGVRPEQYDEFISRLKTCPNVAKPLRYMSHFGCADELDSSITPQQIELFMS 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
           L S  +G E SLA+S+G+L  P    +  RPGI +YG +   +K       Q V+T ++ 
Sbjct: 181 LTSGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFSDKTAQDLGYQPVMTLKSH 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP +              G   +
Sbjct: 240 LIAVREVKKGESVGYGGIWTSERDTKVGVIAVGYGDGYPRSAPN-----------GTPVW 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI G+++MDM   D+    + +V D   ++G ++ +++VA   GT  Y+L+ ++
Sbjct: 289 VNGRTVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKELPVEEVANHIGTIAYELVTKL 348

Query: 362 GTRYAKFYT 370
             R    YT
Sbjct: 349 TPRVEMEYT 357


>gi|312112523|ref|YP_003990839.1| alanine racemase [Geobacillus sp. Y4.1MC1]
 gi|311217624|gb|ADP76228.1| alanine racemase [Geobacillus sp. Y4.1MC1]
          Length = 381

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 147/375 (39%), Gaps = 26/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A+  N   +   L  + R  AVVK NAYG G  ++A     AG     V  +
Sbjct: 6   TWAEIDLDAIYYNVSQLKNFLPNDVRIMAVVKANAYGHGDVQVAKTALEAGASYLAVAFL 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I VL    P    I     +   +     +   +   S      + 
Sbjct: 66  DEALALRKGGIDAPILVLGASRPSDINIAAKHRITLTVFQAEWIEQAADFYSETAPVLFH 125

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L++DTG  RLG+  + E               L  + +H A AD+ ++   S Q + F  
Sbjct: 126 LKMDTGMGRLGVKEETETKRLIEQIDRHPYFSLEGVYTHFATADEINTGYFSFQYDNFLR 185

Query: 185 LISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV----TA 238
           ++             +S+  L  P+  F + R GIS+YG +        +   +    + 
Sbjct: 186 MLEWLPYKPPLIHCGNSATTLRFPDKVFNMARFGISMYGLSPSPEIKQYLPYTLKEAFSL 245

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +R++ ++K   GE VSYG       +  +    IGYADG+   L               
Sbjct: 246 HSRLVHVKKLKPGEKVSYGATYTAETEQWVGTVPIGYADGWLRKLQNF------------ 293

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    T N
Sbjct: 294 HVLVNGEKAPIIGRICMDQLMVRLPKQLPV--GTKVTLIGRQGDKYISVDDVAQYLDTIN 351

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   I  R  + +
Sbjct: 352 YEIPCTISYRVPRIF 366


>gi|153803236|ref|ZP_01957822.1| alanine racemase, biosynthetic [Vibrio cholerae MZO-3]
 gi|124121216|gb|EAY39959.1| alanine racemase, biosynthetic [Vibrio cholerae MZO-3]
          Length = 376

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 113/375 (30%), Positives = 173/375 (46%), Gaps = 21/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSV 177
                 L+VD+G +RLG+   E         ++          +SH  CAD+        
Sbjct: 129 TPVMVWLKVDSGMHRLGVVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVE 188

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQT 234
           Q E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q 
Sbjct: 189 QTELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQP 247

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T            
Sbjct: 248 VMTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN--------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
             G    + G  VPI G+++MDM   D+       VGD   ++G ++ +++VA   GT  
Sbjct: 299 --GTPVVVNGRRVPIAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIG 356

Query: 355 YDLLVRIGTRYAKFY 369
           Y+L+ ++ +R    Y
Sbjct: 357 YELVTKLTSRVEMSY 371


>gi|330812573|ref|YP_004357035.1| alanine racemase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380681|gb|AEA72031.1| alanine racemase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 357

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+K +AYG G  + A AL +     F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREITG-AKALAVIKADAYGHGAVRCAEALQDT-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +  I +L G     +  +I + +   V+ S+ QL    K         
Sbjct: 60  IEEALELRAGGIRGPILLLEGFFEASELPLIVEHDFWCVVHSLWQLEAIEKAALS-QPIT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL   +                 +++SH A AD+     ++ QL  F 
Sbjct: 119 VWLKLDSGMHRVGLHPADYQAAYRRLLASGKVAKIVLMSHFARADELHDPSSTEQLAIFD 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
                    + SL +S  +L  P       RPGI LYG T     +     +Q V+T E+
Sbjct: 179 KARQGLVA-QISLRNSPAVLGWPQIPSDWVRPGIMLYGATPFDEPNAVASRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG +   T+ + + V A+GYADGYP                G   
Sbjct: 238 KIICVRELPAGEPVGYGARFVTTQPTRVGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T+     +G  ++++G +I   DVA A+ T  Y +   
Sbjct: 287 LVDGQRSQLVGRVSMDMLCVDLTNVPQAGLGSTVELWGKNILASDVAKAADTIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRLYS 355


>gi|268591426|ref|ZP_06125647.1| alanine racemase [Providencia rettgeri DSM 1131]
 gi|291313080|gb|EFE53533.1| alanine racemase [Providencia rettgeri DSM 1131]
          Length = 360

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 110/364 (30%), Positives = 181/364 (49%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  ++ N++  AVVK NAYG G   +  A+    V  F V  + E + 
Sbjct: 8   INRRALRHNLQRVKEIAPNSQMIAVVKANAYGHGLVGVGQAVEEL-VDGFGVARLNEALL 66

Query: 71  LRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR +     I +L G        ++ +  +  VI  + QL                +++D
Sbjct: 67  LRQHGVIKPIVLLEGFFEQSDLLLMAEHQIDTVIHCIEQLEMLEATK-LPYPLKVWMKLD 125

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           TG +RLG+  ++A  F       +++     I+SH   AD P       Q+  F+  I  
Sbjct: 126 TGMHRLGILPKDAEGFYQRLQRCQQVQLPINIVSHFCQADAPHLPTTEKQIACFKQFIDG 185

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E S+A+S+GILL P  H+   RPGI +YG + +  K      +  V+T ++ +I +
Sbjct: 186 KEG-EKSIAASAGILLWPEAHYDWVRPGIMMYGASPQEGKSAEDFGLLPVMTLKSTLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AG+ V YG      +D+L+ V AIGY DGYP             V  G    I G 
Sbjct: 245 REHAAGQCVGYGETWCSDKDTLLGVVAIGYGDGYPRN-----------VPSGTPVLINGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G+I+MDMT+ D+  +   +VGD + ++G  + ++++A  +G  NY+LL ++ +R 
Sbjct: 294 KVPIVGRISMDMTVVDLGLNADDKVGDDVILWGNQLPVEEIATQTGIINYELLTKLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMEY 357


>gi|302038070|ref|YP_003798392.1| alanine racemase [Candidatus Nitrospira defluvii]
 gi|300606134|emb|CBK42467.1| Alanine racemase [Candidatus Nitrospira defluvii]
          Length = 387

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 166/377 (44%), Gaps = 23/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + +DL AL +N   +  L+  +   AVVK NAYG G  ++   L    V  F V +
Sbjct: 8   PPTSVSVDLNALGHNLAHVRRLAPRSEVLAVVKANAYGHGALELTRTLQQLAVHRFGVAT 67

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHP 123
           V+EG+ LR       I V+    P Q   +    L PV+  S     F + +      + 
Sbjct: 68  VDEGIVLRQAGIHDPILVMGPTVPAQFPDLIAHRLTPVLYRSDMVQAFAAAVPPKAAPYS 127

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++++TG  RLG+   E  D       +   +L  +++HLA AD+  +     QL  F+
Sbjct: 128 VHVKIETGMGRLGVHPPEMPDLAAMPAFRATLRLEGLMTHLADADNTKTTHTETQLTEFQ 187

Query: 184 TLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVV 236
             +               A+S+GI+  P   + L RPGI LYG     N++     + ++
Sbjct: 188 QTLDTLRQGGLSCPLIHAANSAGIIQYPASLYTLVRPGIMLYGYHTLSNETPAPELRPIL 247

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A I  +    AG+ VSY       R S IAV  +GYADGY   LS            
Sbjct: 248 TWKATIAHLHNIQAGDSVSYNRTFIAARRSKIAVLPVGYADGYNRLLSNR---------- 297

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   I G  VP++G++ MDMTM D+TD   + +G    + G      +   D+A    T
Sbjct: 298 -GMVLIGGRRVPVVGRVCMDMTMVDVTDVPGVHIGQEAILIGQQGQERLTAADLAAWQQT 356

Query: 353 TNYDLLVRIGTRYAKFY 369
             Y++L  IG R  + Y
Sbjct: 357 IPYEVLCAIGQRVPRHY 373


>gi|169346950|ref|ZP_02865898.1| alanine racemase [Clostridium perfringens C str. JGS1495]
 gi|169297009|gb|EDS79133.1| alanine racemase [Clostridium perfringens C str. JGS1495]
          Length = 386

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRTLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVVGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|24375404|ref|NP_719447.1| alanine racemase [Shewanella oneidensis MR-1]
 gi|81845755|sp|Q8EAI6|ALR_SHEON RecName: Full=Alanine racemase
 gi|24350242|gb|AAN56891.1|AE015824_2 alanine racemase, biosynthetic [Shewanella oneidensis MR-1]
          Length = 358

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 180/366 (49%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   + +++  AVVK N YG G   +A  L       F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQASSSQVMAVVKANGYGHGLLNVAKCL--NNADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR  + +AR+ +L G        ++ + ++  V+    Q+    +  +      
Sbjct: 61  LEEALELRAGSVKARLLLLEGFFRSTDLPLLVEHDIDTVVHHESQIEMLEQ-ATLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++    +   +  K + +   +++H ACAD+P +H   VQ++ F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFSAVYARLTACKNVAKPIHLMTHFACADEPDNHYTQVQMQTF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI++YG +        +H +   +   
Sbjct: 180 NQLTADLPGFRT-LANSAGALYWPKSQGDWIRPGIAMYGVSPVTGDCGANHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R+  A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVREHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +I G  VPI+G+++MDM   D+    + +VGD + ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWINGRRVPIVGRVSMDMLTVDLGHDATDQVGDDVLLWGQALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|150018925|ref|YP_001311179.1| alanine racemase [Clostridium beijerinckii NCIMB 8052]
 gi|149905390|gb|ABR36223.1| alanine racemase [Clostridium beijerinckii NCIMB 8052]
          Length = 387

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL A+  N  ++  L  +    AVVK + YG G   + P L   G     V  
Sbjct: 6   RPVYAEIDLDAIAYNIKNIKKLVKDKEIIAVVKADCYGHGALDVVPTLLENGASRLAVAV 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + EG++LR    +A I +L        + +   +L   +  +      SK   S      
Sbjct: 66  LTEGIELRNDNIKAPIMILGYTPSYLNEELIKYDLEQTVYDLDYAKELSKTALSLNKKAK 125

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    E A+D      + +  ++  I +H + +D+      + Q E+F
Sbjct: 126 IHIAIDTGMGRIGFLPTEKAIDAICKICSLEGLEVIGIFTHFSTSDEKDKEYTNEQFEKF 185

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
             L+     +        +++S  I+  P  +    R GI LYG         ++  ++ 
Sbjct: 186 TDLLKKLSNLNIEIPIKHVSNSGAIMDMPETYLDAVRAGIILYGYYPSPEVKKENLSLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +A I  +++  AG  +SYG      R SLIA   IGYADGY   L           
Sbjct: 246 ALTLKATITRVQEMDAGMSISYGRTFNTERKSLIATIPIGYADGYSRLL----------- 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDI----KLDDVALA 349
               K  I G   PI+G+I MD  M DITD    I+VGD + I G         D+ A  
Sbjct: 295 AKNAKVIINGQFAPIVGRICMDQCMIDITDINGDIKVGDEVIILGEQNGLRFNADNFAEI 354

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY++L  +  R  + Y
Sbjct: 355 MGTINYEILCMLKYRIPRVY 374


>gi|317499467|ref|ZP_07957733.1| alanine racemase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893241|gb|EFV15457.1| alanine racemase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 387

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 167/384 (43%), Gaps = 26/384 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+    +   IDL A+ +N   +  + G   +   V+K + YG G   IA  L   GV  
Sbjct: 1   MNQYYRVHAVIDLDAICHNIREVKRVVGEGVKVMPVIKADGYGHGAVPIAKELNKIGVDA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V  +EEG+ LR    +  I +L      Q   +    + P +         SK+    
Sbjct: 61  FAVAILEEGITLRNNGIRQPILILGYTSEYQYSSLIQYEIEPTVFCYEMAESLSKIAQAL 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      +++DTG NR+G    +E++D           ++  I +H ACAD+        
Sbjct: 121 GKDAKIHIKLDTGMNRIGFKPTKESVDIIEKIAKLPNIKIQGIFTHFACADEADKTETYE 180

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           Q  ++   I+  +  +  +      +S+ I+    +   + R GI  YG       S   
Sbjct: 181 QERKYDQFITWLEERDIYIPIKHVSNSASIIDLDGFRKDMVRSGIITYGLYPSEEVSKDV 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +  +  I+ I++  AGE +SY       + + IA   +GYADGYP +LS     
Sbjct: 241 LDLRPAMELKTHIVYIKEVEAGEGISYNHTYVTDKKTKIATIPVGYADGYPRSLS----- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  I+G   PI+G+I MD  M D+TD   + V D + + G D    + +++
Sbjct: 296 ------SKGKVLIRGQYAPIIGRICMDQFMVDVTDIEGVSVMDEVTLVGHDGNKMLTVEE 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA  +G+ NY+ +  IG R  + Y
Sbjct: 350 VANEAGSFNYEFVCGIGKRVPRVY 373


>gi|262401537|ref|ZP_06078104.1| alanine racemase biosynthetic [Vibrio sp. RC586]
 gi|262352252|gb|EEZ01381.1| alanine racemase biosynthetic [Vibrio sp. RC586]
          Length = 361

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 113/365 (30%), Positives = 177/365 (48%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L AL++N   +   + +++  AVVK N YG G   IA      G   F V  +EE ++
Sbjct: 8   INLDALQHNLQRVKQQAPHSKIMAVVKANGYGHGLRHIARYAI--GADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L+VD
Sbjct: 66  LRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLETPVMVWLKVD 124

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  DF +       + +    +SH  CAD+      + Q E F +L   
Sbjct: 125 SGMHRLGVRPEQYRDFVNRLHQCANVAKPLRYMSHFGCADELDKSTTAEQTELFLSLTQG 184

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V+T ++ +I +
Sbjct: 185 CQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAEELGYQPVMTLKSHLIAV 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE V YGG     RD+ I V AIGY DGYP T              G    + G 
Sbjct: 244 REVKAGESVGYGGIWTSQRDTKIGVIAIGYGDGYPRTAPN-----------GTPVVVNGR 292

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+    +  VGD   ++G ++ +++VA   GT  Y+L+ ++ +R 
Sbjct: 293 RVPIAGRVSMDMLTVDLGPEATDCVGDEAMLWGRELPVEEVAAHIGTLGYELVTKLTSRV 352

Query: 366 AKFYT 370
              Y+
Sbjct: 353 EMSYS 357


>gi|182624961|ref|ZP_02952739.1| alanine racemase [Clostridium perfringens D str. JGS1721]
 gi|177909758|gb|EDT72176.1| alanine racemase [Clostridium perfringens D str. JGS1721]
          Length = 386

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 148/379 (39%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I+L  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEINLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    +E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNEEGLNKVLEICSLPGVEVVGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|156972397|ref|YP_001443304.1| alanine racemase [Vibrio harveyi ATCC BAA-1116]
 gi|156523991|gb|ABU69077.1| hypothetical protein VIBHAR_00017 [Vibrio harveyi ATCC BAA-1116]
          Length = 366

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 177/365 (48%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL+AL++N   +   + +++  AVVK N YG G   +A    +     F V  +EE ++
Sbjct: 16  IDLSALQHNLQRVKQQAPDSKVMAVVKANGYGHGLRHVAKHATH--ADAFGVARIEEALQ 73

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L++D
Sbjct: 74  LRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLVALEQ-AELETPVVVWLKID 132

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  +F                +SH  CAD+  + + + Q++ F +L + 
Sbjct: 133 SGMHRLGVRPEQYDEFITRLKECPNVAKPLRYMSHFGCADELDNSITTEQIDLFMSLTAG 192

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P       RPGI +YG +   +K       + V+T ++ +I +
Sbjct: 193 CQG-ERSLAASAGLLAWPQSQLDWVRPGIIMYGVSPFNDKTAQDMGYKPVMTLKSHLIAV 251

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   GE V YGG     RD+ + V A+GY DGYP T              G    + G 
Sbjct: 252 REVKKGESVGYGGMWTSERDTKVGVIAVGYGDGYPRTAPN-----------GTPVLVNGR 300

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+    + +V D   ++G D+ +++VA   GT  Y+L+ ++ +R 
Sbjct: 301 KVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKDLPVEEVASHIGTIAYELVTKLTSRV 360

Query: 366 AKFYT 370
              Y+
Sbjct: 361 EMEYS 365


>gi|167625575|ref|YP_001675869.1| alanine racemase [Shewanella halifaxensis HAW-EB4]
 gi|167355597|gb|ABZ78210.1| alanine racemase [Shewanella halifaxensis HAW-EB4]
          Length = 358

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALKNN   ++ L+ +++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISRHALKNNLARLHELAPSSKVMAVVKANGYGHGLLNVAQCLDN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR    +A++ +L G         + + ++  V+    Q+    +         
Sbjct: 61  LEEALALRAGGVKAKLLLLEGFFRAADLVTLVEHDIETVVHHESQIEMLEQ-AELNKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERF 182
             +++D+G +RLG    E         +     +   +++H ACAD+PS+   + QL  F
Sbjct: 120 VWMKIDSGMHRLGFVPDEFKVVYQRLLDCDNVAKPINLMTHFACADEPSNPYTAEQLAVF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L     G + +LA+S+G L          RPGI+LYG +     +   H +   +   
Sbjct: 180 EALTKDLPG-DRTLANSAGALFWQQSQANWIRPGIALYGVSPVVGDLGTKHGLIPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I IR   AG+ V Y       +D+ + V AIGY DGYP               LG  
Sbjct: 239 SQLIAIRDHKAGQPVGYASYWTADKDTKLGVVAIGYGDGYPRNA-----------PLGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G + PI+G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y+L+ 
Sbjct: 288 VLINGRLAPIVGRVSMDMLTVDLGADAKDSVGDKAVLWGKELPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|258592918|emb|CBE69227.1| Alanine racemase [NC10 bacterium 'Dutch sediment']
          Length = 392

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/377 (27%), Positives = 169/377 (44%), Gaps = 26/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +++DL A+++N  ++  L   + +  +VVK + YG G   +A    +AG     V 
Sbjct: 18  HRAWVEVDLEAIRHNIAAIRRLLKPSTQLMSVVKADGYGHGAVAVARTALSAGASWLAVA 77

Query: 64  SVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           +V+EG+ LR+    A I +    I   + + + +  L P + S+ Q   +S+        
Sbjct: 78  TVDEGISLRMAGIDAPILLFGPVICTEEIEAVAEHRLQPTVCSLDQARRFSEAGLG--PV 135

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  L+VDTG +RLG+S QEA D            +  + SHLA AD         Q ERF
Sbjct: 136 PIHLKVDTGMSRLGISWQEAQDLLSAIRVLPDVSVVSLYSHLATADAVDPTTTREQFERF 195

Query: 183 RTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTV 235
             L+     +GI      LA+S+  L  P+ HF L R G++ YG     +      ++  
Sbjct: 196 SQLVETLEQQGIRPPLVHLANSAATLTFPDTHFDLVRIGLAQYGLYPSSHLQAVVALRPA 255

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +A+II ++    G  VSYG   +  R + +A  +IGY DG    LS           
Sbjct: 256 LALKAKIIFVKTVPPGTGVSYGHTFRTARRTRLATVSIGYGDGISRALSNRIDF------ 309

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
                 ++G  V  +G ITMD  + D+TD+  +  GD   + G      I + + A   G
Sbjct: 310 -----LVRGRRVRQVGTITMDQCLIDVTDAPEVSDGDIATLLGHDGEEGISIAEWAERLG 364

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++L  +  R  + 
Sbjct: 365 TIPYEILTALSPRLPRI 381


>gi|84393171|ref|ZP_00991935.1| alanine racemase [Vibrio splendidus 12B01]
 gi|84376223|gb|EAP93107.1| alanine racemase [Vibrio splendidus 12B01]
          Length = 358

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 111/367 (30%), Positives = 171/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL AL++N + + + +   +  +VVK N YG G   IA    N+    F V  +E
Sbjct: 4   ATASIDLNALEHNLNQIKSKAPQCKVMSVVKANGYGHGLLHIAKHSKNS--DAFGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G +   +  I  TN I  +    +     +           L
Sbjct: 62  EALQLRAGGIVKPILLLEGFYSSGDLPILVTNNIQTVVHCEEQLSALENADLETPVVVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VD+G +RLG+  ++  +F         + +    +SH  CAD+        Q E F +L
Sbjct: 122 KVDSGMHRLGVRPEQYQNFVERLHQCANVAKPLRYMSHFGCADELDRATTVEQTELFLSL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARI 242
               +G E SLA+S+G+L  PN H    RPGI  YG +   +KS      + V+T  + +
Sbjct: 182 TDGCEG-ERSLAASAGLLAWPNSHLDWVRPGIISYGVSPFADKSAQELGFKPVMTLTSHL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YG      RD+ + V AIGY DGYP                G   F+
Sbjct: 241 IAVRDVKAGESVGYGANWTSERDTKVGVIAIGYGDGYPRMAPN-----------GTPVFV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+    + +VGD   ++G D+  ++VA   GT  Y+L+ ++ 
Sbjct: 290 NGRKVPIAGRVSMDMLTVDLGPDAADKVGDEATLWGKDLPSEEVAEHIGTIAYELVTKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|167766635|ref|ZP_02438688.1| hypothetical protein CLOSS21_01141 [Clostridium sp. SS2/1]
 gi|167711758|gb|EDS22337.1| hypothetical protein CLOSS21_01141 [Clostridium sp. SS2/1]
 gi|291558653|emb|CBL37453.1| alanine racemase [butyrate-producing bacterium SSC/2]
          Length = 387

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 167/384 (43%), Gaps = 26/384 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+    +   IDL A+ +N   +  + G   +   V+K + YG G   IA  L   GV  
Sbjct: 1   MNQYYRVHAVIDLDAICHNIREVKRVVGEGVKVMPVIKADGYGHGAVPIAKELNKIGVDA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V  +EEG+ LR    +  I +L      Q   +    + P +         SK+    
Sbjct: 61  FAVAILEEGITLRNNGIRQPILILGYTSEYQYSSLIQYEIEPTVFCYEMAESLSKIAQAL 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      +++DTG NR+G    +E++D           ++  I +H ACAD+        
Sbjct: 121 GKDAKIHIKLDTGMNRIGFKPTKESVDIIEKIAKLPNIKIQGIFTHFACADEADKTETYE 180

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           Q  ++   I+  +  +  +      +S+ I+    +   + R GI  YG       S   
Sbjct: 181 QERKYDQFITWLEERDIYIPIKHVSNSASIIDLDGFRKDMVRSGIITYGLYPSEEVSKDV 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +  +  I+ I++  AGE +SY       + + IA   +GYADGYP +LS     
Sbjct: 241 LDLRPAMELKTHIVYIKEVEAGEGISYNHTYVTDKKTKIATIPVGYADGYPRSLS----- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   GK  I+G   PI+G+I MD  M D+TD   + V D + + G D    + +++
Sbjct: 296 ------SKGKVLIRGQYAPIIGRICMDQFMVDVTDVEGVSVMDEVTLVGHDGNKMLTVEE 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA  +G+ NY+ +  IG R  + Y
Sbjct: 350 VANEAGSFNYEFVCGIGKRVPRVY 373


>gi|260767143|ref|ZP_05876087.1| alanine racemase biosynthetic [Vibrio furnissii CIP 102972]
 gi|260617864|gb|EEX43039.1| alanine racemase biosynthetic [Vibrio furnissii CIP 102972]
 gi|315181333|gb|ADT88247.1| alanine racemase, biosynthetic [Vibrio furnissii NCTC 11218]
          Length = 364

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 105/373 (28%), Positives = 174/373 (46%), Gaps = 18/373 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + N++  AVVK N YG G   +A      G   F
Sbjct: 1   MNYMKAATACINLDALRHNLQQIKQQAPNSKLMAVVKANGYGHGLRHVAKHAV--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSQGDLPVLVTNNIQTVLHCEEQLQALESAELET 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L++D+G +RLG+  ++   F         + +    +SH  CAD+      + Q+
Sbjct: 119 PVVVWLKIDSGMHRLGVRPEQYAQFVARLQACNNVAKPLRYMSHFGCADELDKSTTTEQI 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
           E F +L +  +G E S+A+S+G+L  P    +  RPGI +YG +    K+      Q V+
Sbjct: 179 ELFLSLTNGCEG-ERSMAASAGLLAWPQSQMEWVRPGIIMYGVSPFAEKNAQQLGYQPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +I +R   AGE V YG      RD+ I V AIGY DGYP T              
Sbjct: 238 TLKSHLIAVRDVKAGESVGYGATWVSERDTKIGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G +VP+ G+++MDM   D+       VGD   ++G ++ +++VA   GT  Y+
Sbjct: 287 GTPVVVNGRVVPLAGRVSMDMLTVDLGPDARDNVGDEAILWGSELPVEEVASHIGTLGYE 346

Query: 357 LLVRIGTRYAKFY 369
           L+ ++ +R    Y
Sbjct: 347 LVTKLTSRVDMSY 359


>gi|168212492|ref|ZP_02638117.1| alanine racemase [Clostridium perfringens CPE str. F4969]
 gi|170716170|gb|EDT28352.1| alanine racemase [Clostridium perfringens CPE str. F4969]
          Length = 386

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 147/379 (38%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL  + NN   +  L G     AVVK NAYG G   IA  L   G     V  
Sbjct: 6   RPVWAEIDLDIIANNMKEIRNLVGEKEIIAVVKANAYGHGALDIASTLLENGASRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + E  +LR     A I +L        + + +  +   +  V      S      G    
Sbjct: 66  ITEADELRDAGITAPIMILGYTPINFAENLINNEIEQTVYDVEYAKELSDFALKLGKKAK 125

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G     E L+      +    ++  + +H + +D+        Q  + 
Sbjct: 126 IHIAIDTGMGRIGFLPNKEGLNKVLEICSLPGVEVIGLFTHFSTSDEKDKTYTYEQFSKL 185

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
                     GI   L  +S     +  P  +    R GI  YG         ++  ++ 
Sbjct: 186 TAFNKALEDNGIHIPLKHASNSGAIMDLPETYLDGVRCGIISYGYYPSEEVKKENLKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +  +  +++      VSYG   K  + S IA   IGYADGY   LSG         
Sbjct: 246 ALTLKTNVAFVKELDEDMYVSYGRTYKTEKKSKIATLPIGYADGYSRLLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALAS 350
               K  IKG    ++G++ MD  M D+T    +++GD + + G +       +D+A   
Sbjct: 297 --KAKVIIKGQFANVIGRVCMDQCMIDVTHIEDVKIGDEVILLGEENGLKFDANDMAEIM 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY++L  I  R  + Y
Sbjct: 355 GTINYEILCMISHRVPRIY 373


>gi|126659612|ref|ZP_01730742.1| alanine racemase [Cyanothece sp. CCY0110]
 gi|126619058|gb|EAZ89797.1| alanine racemase [Cyanothece sp. CCY0110]
          Length = 402

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 113/379 (29%), Positives = 168/379 (44%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++IDL+AL +N   +  L S      AVVK +AYG G   +A     AG     V
Sbjct: 19  RKRAWVEIDLSALSHNVRQIKQLLSPKTALMAVVKADAYGHGAIAVAQTALQAGASALAV 78

Query: 63  TSVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
            ++ EG++LR     A I +L     P +   I   NL P +    Q    S+ +  C  
Sbjct: 79  ATLGEGIELREAGITAPILILGAINTPEEIAAIAHWNLEPTLCYPEQAMVVSQTLSQCEK 138

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             P  L++DTG +RLG+   +  +F           L  + SHLA ADDP      +Q +
Sbjct: 139 VLPVHLKLDTGMSRLGIPWHQGTEFVTLVKQLPYLNLRSVYSHLATADDPDPSHMYLQHK 198

Query: 181 RFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQ 233
           RF++ I+              A+S+  L+ P  H+ L R G+ LYG     +     P++
Sbjct: 199 RFKSAIANLKTQGIGPPRLHFANSAATLIAPQLHYDLVRVGLGLYGLYPAPHLRSIVPLK 258

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A+I  I+       VSYG Q    R   IAV  IGYADG P  LS         
Sbjct: 259 PVLQVKAKITQIKSIPTNTGVSYGYQFVSDRPMKIAVVGIGYADGVPRNLSNRL------ 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  I+G  V  +G ITMD  M D++    ++VGD + + G D    I  D  A  
Sbjct: 313 -----QVLIQGQRVRQIGAITMDQLMLDVSHLRQVKVGDVVTLIGQDGDYEITADHWARM 367

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 368 LGTISWEILCGFKHRLPRI 386


>gi|320331880|gb|EFW87818.1| alanine racemase [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330873077|gb|EGH07226.1| alanine racemase [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 357

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/370 (29%), Positives = 166/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREHSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHNFWMVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SF-RKGLAAEISLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|303242638|ref|ZP_07329113.1| alanine racemase [Acetivibrio cellulolyticus CD2]
 gi|302589846|gb|EFL59619.1| alanine racemase [Acetivibrio cellulolyticus CD2]
          Length = 389

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/381 (26%), Positives = 169/381 (44%), Gaps = 27/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++L  + +N   +  ++   A    VVK +AYG G  ++A  L   GV    V+
Sbjct: 6   NRAWAEVNLDNIAHNVKEIRRITDKKAEIMGVVKADAYGHGVMEVAKTLLENGVTRLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++E ++LR       I +L    P + + I   ++   + S       S+       + 
Sbjct: 66  MLDEAIQLRKNGIDVPILILSYTDPRRAEEIILNDVTQTVFSHDLAEALSEAAVRLDKNI 125

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++D+G  R+G      A+             +  + +H A +D+       +Q ER
Sbjct: 126 KIHIKIDSGMTRVGFMPGYSAVKNVVKISKLPKIIIEGLFTHFASSDEIDRSYTYMQFER 185

Query: 182 FRTLISHYKGIEASL-----ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQ 233
           F +++S    I   +      +S+G++  P  H  + RPGI+LYG             ++
Sbjct: 186 FMSIVSELNRIGIYIPVKHVCNSAGVIEFPEMHLNMVRPGIALYGMYPSEEVQKDRINLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T +A IIL++       +SYG   K  R+S IA   IGYADGY   L+         
Sbjct: 246 PAMTLKANIILVKDVETDTCISYGRIFKTQRESRIATLPIGYADGYTRLLTN-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIF----GPDIKLDDVAL 348
               G+  + G  VPI+GKI MD  M D+TD    + VGD + +F    G +I ++D+A 
Sbjct: 298 ---KGRVLVNGQSVPIVGKICMDQCMIDVTDVQGEVNVGDEVVLFGSQNGSEISIEDLAS 354

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++   IG R  + Y
Sbjct: 355 KIGTINYEIACIIGKRIPRVY 375


>gi|320322231|gb|EFW78327.1| alanine racemase [Pseudomonas syringae pv. glycinea str. B076]
          Length = 357

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/370 (29%), Positives = 166/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREHSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHNFWTVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SF-RKGLAAEISLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|300857181|ref|YP_003782165.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
 gi|300437296|gb|ADK17063.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
          Length = 385

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 24/382 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           + ++  + +++DL+ + +N  S+  +  +     VVK +AYG G   +AP L   G    
Sbjct: 2   LTNHRPVWVEVDLSIIASNMRSIRDVCKDKEIFGVVKADAYGHGAIDVAPVLLENGATRL 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-G 119
            V  V EG++LR      +I VL    P   + + +  L PV+S        S+  +   
Sbjct: 62  AVALVSEGIELRKAGVTCQINVLGITPPNLFRELLEYELEPVVSDYDYAKALSESAAALN 121

Query: 120 VSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +    L+VDTG  R+G  + ++A+D            +  I SH + A + +   +  Q
Sbjct: 122 KTVRIHLKVDTGLGRIGFLTTEKAVDEAVMISKLPNIFIESIFSHFSSAGEANKEYSYKQ 181

Query: 179 LERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHP 231
            E+F+  I+  +          +A+SS I   P  +    RPG  +YG +  D   +  P
Sbjct: 182 FEKFQWFINKMEEKGLYIKLKHIANSSAIWNLPETYLDGVRPGTIIYGCSSDDVKREVIP 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +T +A I+ +++  AG+ + YG + +  R S+I    +GYADGY   LSG      
Sbjct: 242 IKPAMTWKANILFLKELEAGQYIGYGRKFRTERKSIIGTLGVGYADGYSRMLSG------ 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  K  I G   P++G I MD  M D+TD   +++GD + + G      I  DD+A
Sbjct: 296 -----KAKVIINGKFAPVVGNICMDQCMVDLTDIGDVKLGDEVILMGSQGELKIDADDIA 350

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT N +++  IG R  + Y
Sbjct: 351 KLIGTNNNEVMCLIGRRVPRVY 372


>gi|88858927|ref|ZP_01133568.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           tunicata D2]
 gi|88819153|gb|EAR28967.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           tunicata D2]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/370 (29%), Positives = 172/370 (46%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I L AL +N+  +   +  ++  AV+K NAYG G   IA  L +     F V  
Sbjct: 2   RLATAEISLAALDHNFKRVKEFAPASQIMAVLKANAYGHGLVAIAKRLSS--ADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E + LR       I +L G   P    I+   N   +I    QL         G+   
Sbjct: 60  IDEALALRAGGLVKPIVLLEGFFEPQDLPILLANNFQTIIHHQSQLDALMNCDLDGM-LT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++DTG +RLG+S ++        S  + +     +++H ACADD S+     QL  F
Sbjct: 119 TWLKIDTGMHRLGISPEQFSKAYQTLSQCEHVNPNIRLMTHFACADDLSNGKTQQQLAVF 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
             LI+  K  +  LA+S+ I+  P+ H    RPG+ +YG +  +NK    H +  V+  +
Sbjct: 179 SELIADKKQ-QTCLANSAAIIGWPDSHGDWVRPGLMMYGVSPMLNKVGADHGLAPVMRLK 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            R+I +R    GE V YG       D++I V A+GY DGYP                G  
Sbjct: 238 TRLISLRVVKKGEAVGYGSTWTCPIDTIIGVVAMGYGDGYPRHA-----------PSGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G  VP++G+++MDM   D+      ++GD + ++GP++ ++ VA  + T  Y+LL 
Sbjct: 287 VMVNGKQVPLVGRVSMDMITVDLGLETDAKIGDQVILWGPELPVEVVAQCADTIPYELLC 346

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 347 NITPRVDYHY 356


>gi|262163859|ref|ZP_06031599.1| alanine racemase biosynthetic [Vibrio mimicus VM223]
 gi|262027839|gb|EEY46504.1| alanine racemase biosynthetic [Vibrio mimicus VM223]
          Length = 364

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 111/374 (29%), Positives = 177/374 (47%), Gaps = 18/374 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + +++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLDALQHNLQRVKQQAPHSKIMAVVKANGYGHGLRHIARYAI--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSQGDLPVLVTNNIQTVVHCEEQLQALEQAQLET 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VD+G +RLG+  ++  DF +       + +    +SH  CAD+      + Q 
Sbjct: 119 PVMVWLKVDSGMHRLGVRPEQYRDFVNRLHQCVNVAKPLRYMSHFGCADELDKSTTAEQT 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
           E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V+
Sbjct: 179 ELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAEELGYQPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T              
Sbjct: 238 TLKSHLIAVREVKAGESVGYGGIWTSQRDTKIGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VPI G+++MDM   D+    +  VGD   ++G ++ +++VA   GT  Y+
Sbjct: 287 GTPVVVNGRRVPIAGRVSMDMLTVDLGPEAADCVGDEAMLWGRELPVEEVAAHIGTLGYE 346

Query: 357 LLVRIGTRYAKFYT 370
           L+ ++ +R    Y+
Sbjct: 347 LVTKLTSRVEMSYS 360


>gi|127514205|ref|YP_001095402.1| alanine racemase [Shewanella loihica PV-4]
 gi|254802378|sp|A3QI45|ALR_SHELP RecName: Full=Alanine racemase
 gi|126639500|gb|ABO25143.1| alanine racemase [Shewanella loihica PV-4]
          Length = 358

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 175/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALK N   +  L+  ++  AVVK N YG G   +A  L  A    F +  
Sbjct: 3   PFPRAEISGDALKANLKRLRQLAPQSKVMAVVKANGYGHGLLNVAHCL--ASADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A++ +L G   P     + + ++  V+    QL       S      
Sbjct: 61  LEEALELRAGGVSAKLLLLEGFFRPSDVATLVEHDIDTVVHHESQLEMLEA-ASLAKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++DTG +RLG +L +             + +   +++H ACAD+P +   + Q  RF
Sbjct: 120 VWMKIDTGMHRLGFNLDQFEAIYQRLQACANVAKPINLMTHFACADEPDNPATAEQARRF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             + ++  G + +LA+S+  L          RPGI+LYG +     + ++H ++  +   
Sbjct: 180 EQMTANLPG-DRTLANSAATLYWQATQADWIRPGIALYGVSPVVGDLGRNHGLEPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   AG+ V YG   +  +D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKAGDPVGYGSYWRAKQDTKLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G +VP++G+++MDM   D+    + +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRLVPVVGRVSMDMLTVDLGLDATDKVGDTAVLWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|150395954|ref|YP_001326421.1| alanine racemase [Sinorhizobium medicae WSM419]
 gi|150027469|gb|ABR59586.1| alanine racemase [Sinorhizobium medicae WSM419]
          Length = 408

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 180/375 (48%), Positives = 243/375 (64%), Gaps = 6/375 (1%)

Query: 1   MHSNEFL----RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +++F     RL +DL AL +NW  MN  SG AR AAV+K NAYGLG  + APALY AG
Sbjct: 30  MQNSDFSSASSRLTVDLAALADNWRMMNERSGRARAAAVLKGNAYGLGVMQAAPALYAAG 89

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
            +DFFV SVEEG +LR   P+ R++VL G+ PG E + F+ +L+P+I+S  QL ++   +
Sbjct: 90  ARDFFVASVEEGAELRPLVPEGRVYVLAGMWPGNEALFFENDLVPIINSQEQLAYFMAAL 149

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           S    HP  L VDTG NRLGLS +EAL   H+          L++SHLACADDP   +N 
Sbjct: 150 SERGDHPCVLHVDTGMNRLGLSPEEALRLVHDPVRPASFSPVLVMSHLACADDPGHPMNR 209

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
            QL+RFR + + ++G+ ASLA+S G+ LG +YHF LTRPGI++YGG       +PM+ VV
Sbjct: 210 HQLQRFREVTAFFEGVPASLANSGGVFLGEDYHFDLTRPGIAVYGGEAVDGDVNPMKPVV 269

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            AEARI+ IR   +GE  SYG   +  RDS IA  AIGYADGY  ++SG       ++  
Sbjct: 270 IAEARIVQIRTVPSGESASYGASVRFGRDSRIATVAIGYADGYHRSVSGGGVTLRQAMPS 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN 354
           G  GF+ G  VP +G++TMD+++FD+TD     +  GDYI++FG +I +DDVA A GT  
Sbjct: 330 GAFGFLHGRKVPHVGRVTMDLSLFDVTDLPESTVRAGDYIELFGRNIPIDDVARAGGTIG 389

Query: 355 YDLLVRIGTRYAKFY 369
           Y+LL  +G RY + Y
Sbjct: 390 YELLTSLGRRYHRTY 404


>gi|117620242|ref|YP_857049.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561649|gb|ABK38597.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 369

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 177/373 (47%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M++   +   ID+ AL++N+  +   + +++  AV+K NAYG G   +A AL       +
Sbjct: 1   MNT---VTASIDIDALQHNFAVVRRHAPHSKIIAVLKANAYGHGLLPVAHALAQ--ADAY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  VEE + LR       I VL G    +   +   + +       +     +  S   
Sbjct: 56  AVARVEEALVLRANAITKPILVLGGFFSAEALPLLAKHELQTTLHTWEQLALLEQASLPA 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L++DTG NRLGL  +E   F    S  + + Q   +++H + +D+  +    +Q+
Sbjct: 116 PIKVWLKLDTGMNRLGLRAEELPAFIERLSHCRNVVQPFHLMTHFSQSDEQDTQATRLQI 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           E F  L +H  G E ++A+S+GIL  P       RPG+ LYG +    +    H ++ V+
Sbjct: 176 EEFNRLSAHLPG-ERAMANSAGILAWPASRSDWIRPGLMLYGASPFAGQLAADHDLRPVM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++++I  R    GE V YGG     R++ + V A GY DGYP                
Sbjct: 235 TLKSQLIATRACAQGEAVGYGGHWVADRNTTLGVVAAGYGDGYPRMA-----------PE 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    I G  VPI+G+++MDM   D+  +   +VGD + ++G  + ++ VA   GT  Y+
Sbjct: 284 GTPMLINGRQVPIVGRVSMDMITVDLGPAARDKVGDEVTLWGEGLPVEQVAEKIGTIPYE 343

Query: 357 LLVRIGTRYAKFY 369
           LL R+ +R    Y
Sbjct: 344 LLTRLTSRVHLTY 356


>gi|213970669|ref|ZP_03398794.1| alanine racemase, catabolic [Pseudomonas syringae pv. tomato T1]
 gi|301382556|ref|ZP_07230974.1| alanine racemase [Pseudomonas syringae pv. tomato Max13]
 gi|302063077|ref|ZP_07254618.1| alanine racemase [Pseudomonas syringae pv. tomato K40]
 gi|302133576|ref|ZP_07259566.1| alanine racemase [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924503|gb|EEB58073.1| alanine racemase, catabolic [Pseudomonas syringae pv. tomato T1]
          Length = 357

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 163/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  R  AV+K +AYG G   +A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYRLARDSSGG-RALAVIKADAYGHGAVHVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELALIVEHDLWTVVHAIWQLEAIEQAQPGKPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH +CAD+ +S  +  Q+  F  
Sbjct: 120 WLKLDTGMHRVGLHPSEYRAAYQRLLATGKVPRVVLMSHFSCADELNSACSDQQVAVFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  ++  PN     +R GI LYG T        +  +Q V+T E++
Sbjct: 180 ARQGLVA-ETSLKNSPAVMGWPNIPSDWSRTGIMLYGATPFDQTQPLAERLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG      R   I V A+GYADGYP                G    
Sbjct: 239 VISVRELPAGEAVGYGATFVSERPLRIGVVAMGYADGYPRHA-----------PTGTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  +Q++G  +   +VA  +GT  Y +   +
Sbjct: 288 IDGQRSRLLGRVSMDMLCVDLTDVPQAGLGSRVQLWGKGVLASEVATQAGTIPYQIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|75906615|ref|YP_320911.1| alanine racemase [Anabaena variabilis ATCC 29413]
 gi|75700340|gb|ABA20016.1| alanine racemase [Anabaena variabilis ATCC 29413]
          Length = 395

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL +N   +   LS   +  AVVK +AYG G   +A     AG     V
Sbjct: 23  SQRAWVEIDLEALSHNVQQLKQFLSPRTQLMAVVKADAYGHGAVTVAQTALQAGASCLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLM---SC 118
            +V EG++LR    QA I +L   H P Q + I    L P I S  Q   +S  +     
Sbjct: 83  ATVPEGIQLREAGMQAPILILGATHTPEQIQAIAQWQLQPTIGSPKQALIFSNTLETIQH 142

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG + Q+A +F           ++ + SHLA AD P   +   Q
Sbjct: 143 DSPVPVHIKLDTGMSRLGTNWQQAGEFVQLVERLPHLNIASVYSHLATADSPDPGIMEEQ 202

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHP 231
             RF   I+  K +        LA+S+  L  P  H+ + R G+++YG     +  K   
Sbjct: 203 YRRFEEAIAQIKALSIKIPCLHLANSAATLADPRLHYDMVRVGLAVYGLYPAPHLQKKIS 262

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+  +AR+  ++   AG  VSYG Q     +  +AV  IGYADG P  LS       
Sbjct: 263 LKPVIQVQARVTHVKTIAAGTGVSYGHQFIAPHEMRLAVVGIGYADGIPRNLSN------ 316

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  I+G  VP +G ITMD  M D++    ++ G+ + + G      I  DD A
Sbjct: 317 -----KMQVLIRGQRVPQIGAITMDQLMIDVSALPDLQEGEIVTLLGKQGKEKITADDWA 371

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T ++++L     R  + 
Sbjct: 372 EELNTISWEILCGFKHRLPRV 392


>gi|169830668|ref|YP_001716650.1| alanine racemase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637512|gb|ACA59018.1| alanine racemase [Candidatus Desulforudis audaxviator MP104C]
          Length = 380

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 161/379 (42%), Gaps = 27/379 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
           +  +++L+AL +N   +  L G +   AAVVK NAYG G  ++A  L   G     V  V
Sbjct: 8   VWAEVNLSALAHNLGEVRRLVGSDTEVAAVVKANAYGHGLVEVAGTLLAHGADRLCVARV 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPY 124
           +EGV LR     A + V+  + P       D +L   +          +     G   P 
Sbjct: 68  DEGVALREAGIDAPVLVMGFVPPPLYDTALDHDLTLTVYDPEAAAELSAAAARHGRPAPV 127

Query: 125 ALQVDTGFNRLGLSLQ--EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            L++DTG  RLGL     +         +    ++  + +H A AD         QL  F
Sbjct: 128 HLKLDTGMGRLGLVTADRDLYRNILAIASLPHLEIEGLYTHFANADRRDKSHAQRQLVDF 187

Query: 183 RT--LISHYKGIEASL---ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QT 234
                   + GI+  L   A+S+ ++  P     L RPGI LYG              + 
Sbjct: 188 VEVTCTLGHDGIDIELLHAANSAALIDMPESRLNLVRPGIMLYGLYPSPEVKTRQVDLRP 247

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+T +A++  +++  AG  VSYG        + +A    GYADGY   LS          
Sbjct: 248 VMTLKAQVGFLKRVPAGWTVSYGSTYTTPAPTTLATVPCGYADGYNRRLSNR-------- 299

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
              G   I G   P++G++TMD  + D+     + VGD + +FG     ++ +D+VA   
Sbjct: 300 ---GAVLIHGRRAPVVGRVTMDQIVVDVGHIPGVAVGDEVVLFGRQGEAELHVDEVAALL 356

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T NY+++  +  R  + Y
Sbjct: 357 DTINYEVVCAVSARVPRVY 375


>gi|222529882|ref|YP_002573764.1| alanine racemase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456729|gb|ACM60991.1| alanine racemase [Caldicellulosiruptor bescii DSM 6725]
          Length = 390

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL  L  N  ++        +  AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEIDLDNLVYNLENIKKKILPQTKIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + + ++   + +  Q  + S+     G + 
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENDISQTVYTYEQAYYLSQAAQKIGKNA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLE 180
              ++VDTG  R+G     E++    N       +L  I SH  +  D  S      Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCDESIQTVLNIAKLPNIELEGIFSHFSSADDPDSDDFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFEKFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPNSSLKEHISIK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRIGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----YVLIKGEFAKVIGNICMDQCMVDVTDIEDVKIGDEVVIIGKQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEIVCSFSKRIPRVY 376


>gi|146296075|ref|YP_001179846.1| alanine racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409651|gb|ABP66655.1| alanine racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 387

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 163/384 (42%), Gaps = 26/384 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M     +  +I+L  L  N +++   +  N +  AVVK +AYG G  +++  L   G+  
Sbjct: 1   MSLYSRVWAEINLDNLIYNVNNIKEKILPNTQIMAVVKADAYGHGAIEVSRVLVRNGINM 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
             V  ++E ++LR Y     I +L        + + + ++   + +  Q  +        
Sbjct: 61  LAVAIIDEALQLRHYNFDIPILILGFTPFELSEQVVENDISQTVYTFEQAYYLNEAAKKI 120

Query: 119 GVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNS 176
           G      ++VDTG  R+G    +E+++      +    +L  I SH + ADDP S     
Sbjct: 121 GKKAKVHIKVDTGMGRIGFLCTKESIETIIRIASLSHIELEGIFSHFSSADDPQSDNFTY 180

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKS 229
            Q  RF   +              +A+S+  +  P Y   + R G+ LYG      +   
Sbjct: 181 EQFLRFENFVKELNKNGVYFKYRHIANSAAAIRFPQYQLDIVRLGLVLYGLYPSEAVKTE 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +A++I +++   G  +SY  +      S IA   IGYADG+    S     
Sbjct: 241 ISLKPVMSVKAKVINVKEVPEGYPISYNRKYVTPCKSKIATIPIGYADGFTRVGS----- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                       I G    ++G + MD  M D+T    +++GD + I G     +I  DD
Sbjct: 296 ------EKRYVLINGEYAKVVGNVCMDQCMVDVTHIRDVKIGDEVVIIGKQGKNEITADD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  +  R  + Y
Sbjct: 350 LASQIGTINYEVICSVSKRIPRVY 373


>gi|297617945|ref|YP_003703104.1| alanine racemase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145782|gb|ADI02539.1| alanine racemase [Syntrophothermus lipocalidus DSM 12680]
          Length = 379

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 163/384 (42%), Gaps = 26/384 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           MH       ++DL A+ +N   +  L  G AR   VVK NAYG G  ++A      G + 
Sbjct: 2   MHLARPTWAEVDLGAVAHNLKELRNLLVGTARLMPVVKANAYGHGILEVARTCVEEGAEF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  ++E + L+         ++ G    +         + +     +L      ++C 
Sbjct: 62  LAVALLDEALLLKEAGINRPRILVLGATSEEGAQEAVKQGVRLTCFDRRLAEAVSRVACK 121

Query: 120 VSHP--YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           +  P    +++DTG  RLG    E AL            ++  I +H A AD        
Sbjct: 122 LQKPGYIHIKIDTGMGRLGFYPDERALADIEEFLRLPGLEVEGIFTHFAAADAADKSYTE 181

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            QL RF   +     KG++  L  ++     +  P+ H  L RPGIS+YG       ++ 
Sbjct: 182 WQLRRFLDFVGELEQKGVKIPLKHAANSAALIDLPSAHLDLVRPGISVYGLWPSDEVANR 241

Query: 232 M---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +   +RI++++    G  VSYG     TR + +A   IGYADGY   LSG   
Sbjct: 242 CLNLIPAMRLLSRIVMLKDLPPGHAVSYGCTYITTRTTKVATVPIGYADGYSRLLSGKV- 300

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG---PDIKLDD 345
                        ++G  V  +G+I MD  MFD+++   +  GD + +FG     +  D+
Sbjct: 301 ----------HAVVRGKRVCGIGRICMDQCMFDVSEVEGVREGDEVILFGRPEDGVTADE 350

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  +G R  + Y
Sbjct: 351 LASLIGTINYEIVCMLGPRIPRIY 374


>gi|119509533|ref|ZP_01628680.1| alanine racemase [Nodularia spumigena CCY9414]
 gi|119465722|gb|EAW46612.1| alanine racemase [Nodularia spumigena CCY9414]
          Length = 395

 Score =  300 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 109/381 (28%), Positives = 175/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL +N   +   LS N +  AVVK +AYG G   +A     +G     V
Sbjct: 23  SQRAWVEIDLGALSHNVQQLVQFLSPNTQLMAVVKADAYGHGAVTVAQTAVESGAGWLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLY-GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--- 118
            +V EG++LR    +A I +L     P Q + I    L P + S  Q   +S ++     
Sbjct: 83  ATVPEGIQLREGGIKAPILILGASYTPEQIQAIAHWKLQPSLCSPKQAFIFSNILETIND 142

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G   P  +++DTG +RLG + +EA++F     N    +++ I SHLA ADD  +     Q
Sbjct: 143 GSPLPVHIKLDTGMSRLGTNWKEAVEFVQLVQNLPHLEIASIYSHLATADDLDTTFMQEQ 202

Query: 179 LERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             RF   I+             LA+S+  L     H+ + R G+++YG     +  H + 
Sbjct: 203 HRRFEQAIAQIKSTGINPPCLHLANSAASLTNRALHYDIVRAGLAIYGLYPATHLQHTIH 262

Query: 234 --TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
              V+  + R+  ++   AG  VSYG Q    ++  +AV  IGYADG P  LS       
Sbjct: 263 LKPVLQLKTRVTQVKTIAAGTGVSYGQQFIAPQEMRLAVVGIGYADGVPRNLS------- 315

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  I+G  VP +G ITMD  M D++    ++ G+ + + G      I  +D A
Sbjct: 316 ----QKMQVLIRGQRVPQVGTITMDQLMLDVSAIPDLQEGEIVTLLGEQGREQISANDWA 371

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T ++++L     R  + 
Sbjct: 372 EKLNTISWEILCGFKHRLPRV 392


>gi|28867343|ref|NP_789962.1| alanine racemase, catabolic [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28850577|gb|AAO53657.1| alanine racemase, catabolic [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331018536|gb|EGH98592.1| alanine racemase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 357

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 162/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  R  AV+K +AYG G   +A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYRLARDSSGG-RALAVIKADAYGHGAVHVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELALIVEHDLWTVVHAIWQLEAIEQAQLGKPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH +CAD+ +S  +  Q+  F  
Sbjct: 120 WLKLDTGMHRVGLHPSEYRAAYQRLLATGKVARVVLMSHFSCADELNSACSDQQVAVFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  ++  P      +R GI LYG T        +  +Q V+T E++
Sbjct: 180 ARQGLVA-ETSLKNSPAVMGWPKIPSDWSRTGIMLYGATPFDQTQPLAERLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG      R   I V A+GYADGYP                G    
Sbjct: 239 VISVRELPAGEAVGYGATFVSERPLRIGVVAMGYADGYPRHA-----------PTGTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  +GT  Y +   +
Sbjct: 288 IDGQRSRLLGRVSMDMLCVDLTDVPQAGLGSRVELWGKAVLASEVATQAGTIPYQIFCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -RRVPRIYS 355


>gi|269961478|ref|ZP_06175842.1| alanine racemase [Vibrio harveyi 1DA3]
 gi|269833855|gb|EEZ87950.1| alanine racemase [Vibrio harveyi 1DA3]
          Length = 369

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 177/365 (48%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL+AL++N   +   +  ++  AVVK N YG G   +A    +     F V  +EE ++
Sbjct: 19  IDLSALQHNLQRVKEQAPESKVMAVVKANGYGHGLRHVAKHATH--ADAFGVARIEEALQ 76

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G + PG   ++   N+  V+    QL    +           L++D
Sbjct: 77  LRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLAALEQ-ADLETPVVVWLKID 135

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  +F                +SH  CAD+  + + + Q++ F +L + 
Sbjct: 136 SGMHRLGVRPEQYDEFITRLKECPNVAKPLRYMSHFGCADELDNSITTEQIDLFMSLTAG 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P       RPGI +YG +   +K       + V+T ++ +I +
Sbjct: 196 CQG-ERSLAASAGLLAWPQSQLDWVRPGIIMYGVSPFDDKTAQDMGYKPVMTLKSHLIAV 254

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   GE V YGG     RD+ + V A+GY DGYP T              G   F+ G 
Sbjct: 255 REVKKGESVGYGGMWTSERDTKVGVIAVGYGDGYPRTAPN-----------GTPVFVNGR 303

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+    + +V D   ++G D+ +++VA   GT  Y+L+ ++ +R 
Sbjct: 304 KVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKDLPVEEVASHIGTIAYELVTKLTSRV 363

Query: 366 AKFYT 370
              Y+
Sbjct: 364 EMEYS 368


>gi|308051015|ref|YP_003914581.1| alanine racemase [Ferrimonas balearica DSM 9799]
 gi|307633205|gb|ADN77507.1| alanine racemase [Ferrimonas balearica DSM 9799]
          Length = 358

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 181/365 (49%), Gaps = 19/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +I  +AL +N   + AL+ N++  AVVK NAYG G  ++A  + +  V  F +  +EE 
Sbjct: 7   AEIRRSALNHNLQRLRALAPNSKLMAVVKANAYGHGLIRLASWMSD--VDGFGLARIEEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR    QAR+ +L G+   ++      + + V+    +     +           L++
Sbjct: 65  LALRESGSQARLVLLEGVFSAEDLEQAAQHELDVVIHDAEQVRLLEHTPLSQPLTIWLKI 124

Query: 129 DTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG +RLG++ ++             +     +++H + AD+  +     Q++RF  L  
Sbjct: 125 DTGMHRLGVTAEQFSALYQRLCQCDNVRTPPNLMTHFSVADELENPETVRQIQRFNQLAQ 184

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIIL 244
           +  G E +L++S+G L  P+ H    RPG++LYG    I    +   ++ V+T  ++++ 
Sbjct: 185 NLPG-EKALSNSAGTLSWPSAHGDWVRPGLALYGVNPMIGGRAEQFDLKPVMTMRSKVLA 243

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  AGE V YG   + +RD+ IAV A+GY DGYP                G    I G
Sbjct: 244 VRELKAGEPVGYGQTWRSSRDTRIAVIAMGYGDGYPRHA-----------VSGTPVLING 292

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P+ G+I+MDM   ++ ++  ++VGD + ++G  + ++++A  +GT  Y+LL     R
Sbjct: 293 QRYPLAGRISMDMLTVEVGEAP-VQVGDDVVLWGDGLPVEEIAECAGTIPYELLCSTTAR 351

Query: 365 YAKFY 369
               Y
Sbjct: 352 VQYRY 356


>gi|294102372|ref|YP_003554230.1| alanine racemase [Aminobacterium colombiense DSM 12261]
 gi|293617352|gb|ADE57506.1| alanine racemase [Aminobacterium colombiense DSM 12261]
          Length = 372

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R++++L  +++N+ ++    G   +  AVVK +AYG G  ++A +L  AG Q F V 
Sbjct: 4   RPTRMEVNLANIQSNFKTIRRHVGAGPQIMAVVKADAYGHGAVEVAKSLIEAGCQRFAVA 63

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           + +E V LR       I VL              ++   ++ +      S+   + G + 
Sbjct: 64  TPDEAVVLREAGINDPILVLGPSPYDAASAYVKHDISAALTDLVFAQMMSREAVNQGKTA 123

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++DTG  R+G   ++      +       ++  + +H A AD+      + Q  R+
Sbjct: 124 LLHLKIDTGMGRIGFLPEQIPGIIDDILKLPGIKIEGLFTHFATADEKRLDYTNQQFARY 183

Query: 183 RT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                       +     + +S+ +L  P  H    RPGI LYG         P++   T
Sbjct: 184 MKVYHFLESKGVRVPLRHVCNSAAVLNSPEKHLDAVRPGIILYGMYPSSECIRPIELKPT 243

Query: 238 AEAR--IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            E +  I  +++  +   V YG +        IAV  IGY DG+   LS           
Sbjct: 244 FEVKTAIAAVKEISSNSGVGYGLRYMSRGTEKIAVLPIGYGDGFSRCLS----------- 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
           +     + G  V ++G I MD TM D+TD   ++VGD + I G      I  +++A A G
Sbjct: 293 MKVPVLVHGKRVSLVGNICMDQTMIDVTDIEDVKVGDEVVIVGRQGEEAITPEEIAPARG 352

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++ +    R  + Y
Sbjct: 353 TINYEIPIMFSKRVPRVY 370


>gi|292669625|ref|ZP_06603051.1| alanine racemase [Selenomonas noxia ATCC 43541]
 gi|292648834|gb|EFF66806.1| alanine racemase [Selenomonas noxia ATCC 43541]
          Length = 368

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 102/376 (27%), Positives = 164/376 (43%), Gaps = 22/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++IDL A+ +N+  +     + A+  AVVK +AYG G   +A     AG +   V
Sbjct: 3   SRAAWVEIDLGAIAHNYGEIRKYIRHEAKLCAVVKADAYGHGAIAVARKAIAAGAEYLAV 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            ++ E +KLR       + +L    P     I D +L   +  +  +   S   +  G  
Sbjct: 63  ATISEALKLREAGFTTPLLILGLTKPESSFDIVDADLTQTVCRIDLVQALSAEATAQGKR 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               + VDTG  R+G+  ++A DF          +L  I SH A AD      +  Q++ 
Sbjct: 123 VKVHIAVDTGLGRIGVRPEDAADFAKKITALPGIELEGIFSHFALADIEDKSFSRHQIKL 182

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--T 234
           F+        +        +A S+ IL  P+ HF + R GI  YG       +HP     
Sbjct: 183 FQIACTGVEAAGIHIPLRHIAESAAILDLPDVHFDMVRAGILQYGLWPSNEVAHPFYLRP 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ARI+ I+    G  + YG      R++ IA  ++GYADGY               
Sbjct: 243 AMKFCARIVYIKTISPGTSIGYGRHFIAERETRIATISVGYADGYIRA------------ 290

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTT 353
           +  G   I+G    I G+I MD  M DITD    ++GD + +FG D +  DD+A  + T 
Sbjct: 291 YACGAVEIRGKRAAIAGRICMDQCMVDITDIPEAKIGDVVTLFGSDTLPADDLAEWANTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           +Y++L  +    ++ Y
Sbjct: 351 SYEVLCLVSKHVSRVY 366


>gi|170079084|ref|YP_001735722.1| alanine racemase [Synechococcus sp. PCC 7002]
 gi|169886753|gb|ACB00467.1| alanine racemase [Synechococcus sp. PCC 7002]
          Length = 399

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 172/379 (45%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++ID  AL  N  ++   L+      AVVK +AYG G  K+A  +  AG     +
Sbjct: 30  RQRAWVEIDHQALAANIRALKDILAPQTALMAVVKADAYGHGAVKVAETVLKAGASWLAI 89

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGV 120
            ++ EGV+LR     A I VL       + + I   +L P + ++ Q+T +++     G 
Sbjct: 90  ATLGEGVELREAGITAPILVLGATNTTEEIEAIAHWDLQPTLCNLSQVTIFNEALARLGK 149

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  L++DTG +RLG   +EAL F           ++ I SH A ADDP       Q +
Sbjct: 150 TLPVHLKIDTGMSRLGTRWEEALPFVAAVHQAPHLNIASIYSHFATADDPDPTTMDQQHQ 209

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ-- 233
           RF+  I+          +  +++S+  L   + H+ L R G+S+YG     + S  +   
Sbjct: 210 RFQAAIAKLEQQGIPIPKRHISNSAATLHSRDLHYDLVRLGLSIYGVYPAPHLSPKVHLK 269

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +ARI  ++       VSYG +     D+  AV  IGYADG P  LS         
Sbjct: 270 PVLQVKARITQLKTLPPDTGVSYGHRFITATDTKTAVVGIGYADGVPRRLSN-------- 321

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                K  + G   P +G ITMD  M D++    ++VGD + + G      + +D  A  
Sbjct: 322 ---NLKVLVNGAFAPQIGAITMDQLMLDVSHLPDVQVGDVVTLIGTDHDQQLTVDQWANQ 378

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 379 LGTISWEILCGFKHRLPRI 397


>gi|158334044|ref|YP_001515216.1| alanine racemase [Acaryochloris marina MBIC11017]
 gi|158304285|gb|ABW25902.1| alanine racemase, putative [Acaryochloris marina MBIC11017]
          Length = 386

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 115/377 (30%), Positives = 176/377 (46%), Gaps = 26/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E   + IDL AL+NN   +   L       AVVK + YG G   +A      G     V 
Sbjct: 13  ERAWVNIDLKALENNVRQIKQQLLPQTALMAVVKADGYGHGAVTVAQTALANGATWLGVA 72

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++ EG++LR     A I +L   H   + + I    L P + S  Q   +S+ +      
Sbjct: 73  TILEGIELRQADINAPILILGATHTVQEIEAIVRWQLQPTLCSPEQALIFSRHLQH--PL 130

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  L+VDTG +RLG   Q+   F          +++ I SHLA ADD  S     Q  R 
Sbjct: 131 PIHLKVDTGMSRLGPIWQQGATFIEFVSRLPNLKIASIYSHLATADDADSSFMLQQQSRL 190

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
           + ++S  +  +       LA+S+G L+GP +H+ L R G++LYG     +  ++  +Q V
Sbjct: 191 QDVLSRIQAQDIPLPKLHLANSAGTLVGPQFHYDLVRVGLALYGLYPAPHFQQAIALQPV 250

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +ARI  I+   AG  VSY       +   +AV  IGYADG P +LS   +       
Sbjct: 251 MQVKARITQIKTLPAGSGVSYNHTFTTEQPLTVAVVGIGYADGVPRSLSNQMN------- 303

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I+G + P +G ITMD  M D++D  +++VG+ + I G D    I  +  A A G
Sbjct: 304 ----VIIRGRLAPQIGAITMDQLMVDVSDVPNLQVGEVVTILGQDGKASISAETWADALG 359

Query: 352 TTNYDLLVRIGTRYAKF 368
           T +Y+++     R  + 
Sbjct: 360 TISYEIVCGFKHRLPRI 376


>gi|289624832|ref|ZP_06457786.1| alanine racemase [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289647733|ref|ZP_06479076.1| alanine racemase [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330866551|gb|EGH01260.1| alanine racemase [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 357

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLARENSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A + +L G     E  +I + +   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIHAPVLLLEGFFEADELALIVEHDFWTVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARVVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SFRKGLVA-ETSLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|229085084|ref|ZP_04217335.1| Alanine racemase [Bacillus cereus Rock3-44]
 gi|228698209|gb|EEL50943.1| Alanine racemase [Bacillus cereus Rock3-44]
          Length = 391

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++++L A+K+N         +      A VK NAYG G  ++A A   AGV    V  V+
Sbjct: 11  VEVNLDAIKHNVREFKKRVNDENMTMMAAVKANAYGHGAVEVAKAAIEAGVNQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           EG++LR       I +L        K   + +++  +  +  L          G      
Sbjct: 71  EGIELREAGISVPILILGYTPVEAAKDAIEYDIMMTVYRIEDLKGIDEVAKRLGKKARIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F     N K  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVAPFLEELKNMKHIEMEGVFTHYSTADEIDKTYTNMQTNLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   L      +S+G +   N    + R GI +YG       +H    +Q  ++
Sbjct: 191 VTTAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSQEVAHTVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVATGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP+LG++ MD  M D+T+++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVLGRVCMDQLMLDVTNAMPVQVGDEVVFYGKQGEEEIPVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|257058805|ref|YP_003136693.1| alanine racemase [Cyanothece sp. PCC 8802]
 gi|256588971|gb|ACU99857.1| alanine racemase [Cyanothece sp. PCC 8802]
          Length = 403

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 174/379 (45%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++I+  AL +N   +  L S      AVVK +AYG G  K+A    +AG     +
Sbjct: 24  RQRAWVEINQQALIHNVAEIKGLLSPKTALMAVVKADAYGHGAIKVAQTALDAGANGLAI 83

Query: 63  TSVEEGVKLRLYTPQARIFVLY-GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
            ++ EG++LR     A I +L     P +   I    L P + +  Q   +S  +S  G 
Sbjct: 84  ATLGEGIELREAGITAPILILGAINTPEEIAAIAQWQLQPTLCNPQQALIFSGTLSKLGQ 143

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  L++DTG +RLG    +A DF          +++ I SHLA ADDP       Q  
Sbjct: 144 TLPVHLKLDTGMSRLGTPWHQATDFVRLVQQLPYLKIATIYSHLATADDPDRSEMERQHR 203

Query: 181 RFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQ 233
           RF+  I+  K           A+S+  L+ PN H+ L R G++LYG     +      ++
Sbjct: 204 RFKQAIAQLKSHGLPLPPLHFANSAATLVNPNLHYDLVRVGLALYGLYPAPHLRSFADLK 263

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A++  ++    G  VSYG Q    R   +AV  IGYADG P  LS         
Sbjct: 264 PVLQVKAKVTQVKTIPPGTGVSYGYQFVSDRTMDVAVVGIGYADGVPRNLSNRL------ 317

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  I+G  V  +G ITMD  M D++   +++VG+ + + G D    I  DD A  
Sbjct: 318 -----EVLIRGQRVRQIGAITMDQLMLDVSAIPNLQVGEVVTLIGKDGDQEITADDWANK 372

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 373 LGTISWEILCGFKHRLPRI 391


>gi|330986844|gb|EGH84947.1| alanine racemase [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 357

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 108/370 (29%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREHSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIHAPVLLLEGFFEADELALIVEHNFWTVVHSTWQLEAIEQ-AQLARPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQSAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SFRKGLVA-ETSLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQASRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATLAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|229593333|ref|YP_002875452.1| alanine racemase [Pseudomonas fluorescens SBW25]
 gi|229365199|emb|CAY53479.1| alanine racemase, catabolic [Pseudomonas fluorescens SBW25]
          Length = 357

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 172/370 (46%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AVVK +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREVTG-AKALAVVKADAYGHGAVRVAQAL-EADADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + +L  V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELPLILEHDLWCVVHSLWQLEAIEQ-AQLRTPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  +              +++SH A AD+     +  Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDFHEAYQRLLASGKVAKIVLMSHFARADELDCVSSDEQVAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEA 240
                    E SL +S  +L  P+      RPGI LYG T           +Q V+T E+
Sbjct: 179 AARQGLSA-EVSLRNSPSVLGWPSVSSDWVRPGIMLYGATPFGEDQALAARLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    +   I V A+GYADGYP                G   
Sbjct: 238 KVICVRELPAGEPVGYGAKFITPKPMRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG+++MDM   D+TD     +G  ++++G +I   D+A A+ T  Y +   
Sbjct: 287 LVAGQRSQLLGRVSMDMLCVDLTDVPQAGLGATVELWGKNILASDIATAAETIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRLYS 355


>gi|298484845|ref|ZP_07002945.1| Alanine racemase, catabolic [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160699|gb|EFI01720.1| Alanine racemase, catabolic [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 357

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLARENSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A + +L G     E  +I + +   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIHAPVLLLEGFFEADELALIVEHDFWTVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SFRKGLVA-ETSLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|71736924|ref|YP_272530.1| alanine racemase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123638783|sp|Q48PY9|ALR_PSE14 RecName: Full=Alanine racemase
 gi|71557477|gb|AAZ36688.1| alanine racemase [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 357

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+       G  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREHRGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHNFWTVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SF-RKGLAAEISLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|268316557|ref|YP_003290276.1| alanine racemase [Rhodothermus marinus DSM 4252]
 gi|262334091|gb|ACY47888.1| alanine racemase [Rhodothermus marinus DSM 4252]
          Length = 382

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 147/373 (39%), Gaps = 23/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I L  L++N   +    G A   AVVK +AYG G   +A  L  AG++ F V  + E 
Sbjct: 7   VEIHLGHLRHNLEQVRRRLGPAEPIAVVKADAYGHGLVPVARTLQEAGIRHFAVARLSEA 66

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           V+LR       I +L    P          +   +SS                    ++V
Sbjct: 67  VELREAGITGSILLLGAAFPEDLAACVAHEVEVTVSSPLLAEAVCAAAPRYGPLRVHVKV 126

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG  RLG+  +EA +            L  + +HLA A+ P       QLERF  L   
Sbjct: 127 DTGMGRLGIWPEEAPEIIRRLEQTPGVTLVGLCTHLATAEQPGDPFVQEQLERFEQLWRQ 186

Query: 189 Y---KGIEASLASSSGILLGPNYHFQ---LTRPGISLYGGTDKINKS--HPMQTVVTAEA 240
                 +     S +   L  +Y        R G +LYG   +        ++ V+   A
Sbjct: 187 VGDAFAVRHVANSGALFTLPSSYWSDSRQQARIGAALYGYLPRPELPGADELRPVMRFVA 246

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ +R    G  +SYG          IAV   GY DG P  LS             G+ 
Sbjct: 247 CIVQVRTVPPGTTISYGRTWTAPGWRRIAVVGAGYGDGIPRRLSNR-----------GQV 295

Query: 301 FIKGYMVPILGKITMDMTMFDITD---SLSIEVGDYIQIFGP-DIKLDDVALASGTTNYD 356
            + G+  PI+G + MDMTM D+ D   +  ++ G+ +  FG     + +VA  + T  Y+
Sbjct: 296 GLHGHRFPIVGAVCMDMTMIDLGDPETAPDVQEGEPVVFFGEGGPSIAEVARWAETIPYE 355

Query: 357 LLVRIGTRYAKFY 369
           L      R  + Y
Sbjct: 356 LSCAAARRVPRRY 368


>gi|20807662|ref|NP_622833.1| alanine racemase [Thermoanaerobacter tengcongensis MB4]
 gi|23813662|sp|Q8RAK6|ALR1_THETN RecName: Full=Alanine racemase 1
 gi|20516208|gb|AAM24437.1| Alanine racemase [Thermoanaerobacter tengcongensis MB4]
          Length = 388

 Score =  299 bits (765), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 162/379 (42%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R+++ L A+ +N+  +  + G N +  AV+K +AYG G   +A  L   GV  F V 
Sbjct: 7   RPTRVEVYLDAITHNFREIKKIVGKNVKIMAVIKGDAYGHGASYVAKFLEKEGVDYFGVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSH 122
           + EE ++LR    +  I +     P Q + I   +L   +  +       K  +      
Sbjct: 67  TTEEALELREKGIKTPILIFGYTPPTQLRQIVKHDLTQTVYDIKYAKELEKESLKQNKRA 126

Query: 123 PYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G    + A        N +   L  I SH A A +        Q ++
Sbjct: 127 KVHIKIDTGLGRIGYIDFDLAQKEILEMANMRGLILEGIYSHFAAASEDDRDYCKEQFDK 186

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQT 234
           F  LIS  +          +A+++ IL     H  + RPGI L+G      + +   ++ 
Sbjct: 187 FMNLISSLEKKRLKIPLKHIANAAAILNLNYSHLDMVRPGIILFGAYPSKRVERKVELRE 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +    R++ ++   AG  + YG      R S+IA   +GYADG    LS          
Sbjct: 247 TLRFTTRVVHLKDVPAGFFIGYGKSFVTKRKSVIATIPVGYADGLDRRLSNNY------- 299

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               K  +KG  VPI+G++ MD  M D+TD   +E+GD + I G      + ++ +A   
Sbjct: 300 ----KLLLKGKYVPIVGRVCMDQCMIDVTDVEGVEIGDEVVIIGTQNNETVSVESMADKI 355

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T   ++  RI  R  + Y
Sbjct: 356 ETIPQEVFSRISRRVPRVY 374


>gi|295697553|ref|YP_003590791.1| alanine racemase [Bacillus tusciae DSM 2912]
 gi|295413155|gb|ADG07647.1| alanine racemase [Bacillus tusciae DSM 2912]
          Length = 375

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 154/377 (40%), Gaps = 24/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
               ++DL+A+++N  S   L+ +A   AVVK + YG G   +A A   AG +   V  +
Sbjct: 9   LTWAEVDLSAIRHNVASFRQLTRDAEIMAVVKADGYGHGAVPVAKAALEAGARRLAVARL 68

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EEG+ LR    +  I +L  I PG  + +   +L   +     +   +            
Sbjct: 69  EEGLALRKAGIRVPILILGWIDPGTARELVAGDLEVAVFDPAHIPPLAAAAREVHKRAGV 128

Query: 125 ALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            +++DTG  R+G   + +AL +          ++    +H A AD         Q +RF 
Sbjct: 129 HIKIDTGMGRIGWRDMDQALKWAAELNRVPEVEIRGTFTHFAAADAEDLTHARGQWKRFD 188

Query: 184 TLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVV 236
             +        +      A+++  L  P  H+   R GI LYG         S  ++  +
Sbjct: 189 RWVKSLESQGMRPPLIHAANTAAALSLPEAHYDALRVGIGLYGYLPNPGWKGSVVLRPAL 248

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
              AR++ ++    G  +SYG   +      I   A+GY DG    LS            
Sbjct: 249 RWMARLVYVKWVEPGAAISYGCTYRAPARRRIGTVAVGYGDGLRRGLSN----------- 297

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   + G   PI+G++ MD TM D+T+      GD + + G D       DD A    T
Sbjct: 298 AGYMLVHGRRAPIVGRVCMDQTMVDLTNIPEARSGDVVTVLGDDGDESWTADDHARLLDT 357

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y++L  IG R  + Y
Sbjct: 358 ISYEILCGIGKRVPRRY 374


>gi|121602454|ref|YP_989355.1| alanine racemase [Bartonella bacilliformis KC583]
 gi|120614631|gb|ABM45232.1| alanine racemase [Bartonella bacilliformis KC583]
          Length = 373

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 187/365 (51%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+  N+  +      A  +AVVK NAYG+G EKI+ ALY AG + FFV+ ++E 
Sbjct: 19  ATIDLGAIIANYKILAQHIAPAECSAVVKANAYGMGAEKISSALYQAGCRTFFVSQIQEA 78

Query: 69  VKLRLYTPQARIFV-LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           ++L+   P     V L G  P  E+ +    LIPV++S   +  +           P  +
Sbjct: 79  LQLKTILPSNITLVLLNGFPPTTEEFVAQAGLIPVLNSWHAIESWQMLCQKKHQKFPAII 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E           +   +  I+SHL+  DD +   N  QL   +T +
Sbjct: 139 QIDTHMNRLGLDQEELQQLIKQPTIFEKANIKYIMSHLSNGDDATHASNDTQLTAMKTAL 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     + SLA+S GI L  +++F L RPGI+LYG         P++ V+  E ++I  R
Sbjct: 199 AQLPTCKVSLANSGGIFLNSDFYFDLVRPGIALYGVDPHGKCPTPIKPVLKLETQVIQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG    +R S +   +IGYADG+  TLS             G  +  G+ 
Sbjct: 259 HVDAGTPVGYGGSFVTSRPSTLTTISIGYADGWLRTLSN-----------KGVVYFNGHK 307

Query: 307 VPILGKITMDMTMFDITD--SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+I+MD T+ D TD      ++GD++++ GP   ++DVA  + T  Y++L  +G R
Sbjct: 308 LPIIGRISMDSTIVDATDLECEKPKIGDWVELIGPHQTVEDVAADADTIPYEILTSLGPR 367

Query: 365 YAKFY 369
             + Y
Sbjct: 368 CKRIY 372


>gi|17229950|ref|NP_486498.1| alanine racemase [Nostoc sp. PCC 7120]
 gi|17131550|dbj|BAB74157.1| alanine racemase [Nostoc sp. PCC 7120]
          Length = 401

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL +N   +   LS   +  AVVK +AYG G   +A     AG     V
Sbjct: 29  SQRAWVEIDLEALSHNVQQLKQFLSPRTQLMAVVKADAYGHGAVTVAQTALQAGASCLGV 88

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLM---SC 118
            +V EG++LR    QA I +L   H P Q + I    L   I S  Q   +S  +     
Sbjct: 89  ATVPEGIQLREAGIQAPILILGATHTPEQIQAIAQWQLQATIGSPKQALIFSNTLETIQH 148

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG + Q+A +F           ++ + SHLA AD P   +   Q
Sbjct: 149 DSPIPVHIKLDTGMSRLGTNWQQAGEFVQLVERLPHLDIASVYSHLATADSPDPGIMEEQ 208

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM- 232
             RF   I+  K +        LA+S+  L  P  H+ + R G+++YG     +  + + 
Sbjct: 209 HRRFEEAIAQIKTLGIKIPSLHLANSAATLADPRLHYDMVRVGLAVYGLYPAPHLQNKIS 268

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            + V+  +ARI  ++   AG  VSYG Q     +  +AV +IGYADG P  LS       
Sbjct: 269 LKPVIQVQARITHVKTIAAGTGVSYGHQFIAPHEMRLAVVSIGYADGVPRNLSN------ 322

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  I+G  VP +G ITMD  M D +    ++ G+ + + G      I  DD A
Sbjct: 323 -----KMQVLIRGQRVPQIGAITMDQLMIDASALPDLQEGEIVTLLGKQGKEKITADDWA 377

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
            A  T ++++L     R  + 
Sbjct: 378 EALNTISWEVLCGFKHRLPRV 398


>gi|125975179|ref|YP_001039089.1| alanine racemase [Clostridium thermocellum ATCC 27405]
 gi|256003157|ref|ZP_05428149.1| alanine racemase [Clostridium thermocellum DSM 2360]
 gi|281418399|ref|ZP_06249418.1| alanine racemase [Clostridium thermocellum JW20]
 gi|125715404|gb|ABN53896.1| alanine racemase [Clostridium thermocellum ATCC 27405]
 gi|255992848|gb|EEU02938.1| alanine racemase [Clostridium thermocellum DSM 2360]
 gi|281407483|gb|EFB37742.1| alanine racemase [Clostridium thermocellum JW20]
 gi|316939345|gb|ADU73379.1| alanine racemase [Clostridium thermocellum DSM 1313]
          Length = 391

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 100/381 (26%), Positives = 170/381 (44%), Gaps = 27/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++L  + +N   +  +         VVK +AYG G  +IA  L   GV    V+
Sbjct: 8   NRAWAEVNLDNIAHNVKEIRRIVDKKVEIMGVVKADAYGHGVMEIARTLLENGVTRLAVS 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++E ++LR    +  I +L    P + + I   ++   + S       S+       + 
Sbjct: 68  MLDEAIQLRQNGIKVPILILSYTDPVRAEEIVLNDVTQTVFSHDLAEALSEAAVKHHRNV 127

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  R+G      A+             +  + +H A AD+       +Q ER
Sbjct: 128 KIHIKIDTGMTRVGFMPGYSAVKNVVQISKLPGIIIEGLFTHFASADEADKSYTYMQFER 187

Query: 182 FRTLISHYKGIEASL-----ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQ 233
           F +++     I   +      +S+ ++  P  H  + RPGI+LYG             ++
Sbjct: 188 FMSIVGELNRIGVYIPVKHVCNSAALIEFPEMHLNMVRPGIALYGLYPSDEVDKTKIDLR 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ +A +IL++       +SYG   K +R+S IA   IGYADGY   L+G        
Sbjct: 248 PAMSLKANVILVKDVEKDTFISYGRIFKTSRNSRIATIPIGYADGYTRLLTG-------- 299

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVAL 348
               GK  + G + PI+G+I MD  M DITD    ++VGD   + G     +IK++D+A 
Sbjct: 300 ---KGKVLLNGQLAPIVGRICMDQCMVDITDIEGDVKVGDEAVLIGKQKDNEIKVEDLAK 356

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           + GT NY+L+  IG R  + Y
Sbjct: 357 SVGTINYELVSIIGKRIPRVY 377


>gi|116671442|ref|YP_832375.1| alanine racemase [Arthrobacter sp. FB24]
 gi|116611551|gb|ABK04275.1| alanine racemase [Arthrobacter sp. FB24]
          Length = 417

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 99/381 (25%), Positives = 158/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+++N   + A++  A+  AVVK +AYG G   +A A   AG +   V  + E 
Sbjct: 36  AVIDLDAIRHNVRHLAAVASPAQVMAVVKADAYGHGAVPVARAALEAGARWLGVAHISEA 95

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR    +A +                  +    S                     L+V
Sbjct: 96  LALRAAGIEAPLLAWLHTPDSNFGAAVAAGIDIGCSGWELEKIVLAAREQERPARVHLKV 155

Query: 129 DTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G +L+             ++ L ++  I SHLA AD+P      +QL+ FR +
Sbjct: 156 DTGLGRNGATLEAWDSLVGEAMEYQDEGLLRVVGIFSHLAVADEPHRPETDLQLQAFREV 215

Query: 186 I-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVT 237
           +     +        LA++   L  P+ HF L R G+ +YG +    +S     ++  +T
Sbjct: 216 LAIAEDAGVDPEVRHLANTPATLSRPDTHFDLVRVGLGIYGLSPFEGQSPAELGLRPAMT 275

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
              ++   +   AG+ VSYG   +    S + +  +GYADG P             V  G
Sbjct: 276 VRTKVSHCKDVPAGQGVSYGLNYRTAGASTLGLIPLGYADGVPR------------VATG 323

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITD----SLSIEV-GDYIQIFGP----DIKLDDVAL 348
           G   ++G   P++G+I MD  + D+      S    V G    +FG         DD A 
Sbjct: 324 GPVRVEGRNYPVVGRIAMDQMVIDLGPRGVSSGGASVLGAEAVLFGDGTDGGPTADDWAR 383

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           A+GT NY+++ RI  R  + Y
Sbjct: 384 AAGTINYEIVTRISPRVPRRY 404


>gi|254519968|ref|ZP_05132024.1| alanine racemase [Clostridium sp. 7_2_43FAA]
 gi|226913717|gb|EEH98918.1| alanine racemase [Clostridium sp. 7_2_43FAA]
          Length = 385

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 175/383 (45%), Gaps = 25/383 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+    +  +I+L  L  N   +   SGN+    VVK NAYG G  +I+  L N G+   
Sbjct: 1   MNLLHPIWAEINLNNLIYNIDQIKKKSGNSEIIGVVKANAYGHGAVEISKVLLNHGINRL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCG 119
            V ++ E ++LR    +A I +L          + + ++ P IS+    +   +K  +  
Sbjct: 61  AVANIVEAIELRENEIKAPIMLLGISEDYAIDALLEYDVEPTISTYEFAMNLNNKANALN 120

Query: 120 VSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +    + +D+G  R+G    +  L+   N       ++  I SH + AD      +  Q
Sbjct: 121 KTVNIHIAMDSGMGRIGFRKNDKGLEDIINISKLSNLKIESIFSHFSTADSKDKSYSLRQ 180

Query: 179 LERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP-- 231
           LE + T +   +       + +L++S+ I+  P  H+   RPGI  YG            
Sbjct: 181 LEIYNTFLDKLQEAGVYINKKNLSNSAAIIDLPESHYDYVRPGIIQYGYYPSDEVDKNHF 240

Query: 232 -MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+T + +II I++    E + YG   K +R +++A   +GYADGY   LS      
Sbjct: 241 DIKHVLTWKTKIIHIKEVEENEYIGYGQTFKTSRKTVVATLPVGYADGYSRGLSN----- 295

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                  GK  I G + PI+G + MD  M DITD  ++ +G+ + + G D       DD+
Sbjct: 296 ------KGKVIINGQLAPIIGNVCMDQFMVDITDIENVHLGNEVILLGSDGNVKFDADDI 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  + T +Y++L  IG R  + Y
Sbjct: 350 AKLTNTISYEVLCLIGRRAPRIY 372


>gi|20137211|sp|Q8YU96|ALR_ANASP RecName: Full=Alanine racemase
          Length = 386

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 113/381 (29%), Positives = 174/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL +N   +   LS   +  AVVK +AYG G   +A     AG     V
Sbjct: 14  SQRAWVEIDLEALSHNVQQLKQFLSPRTQLMAVVKADAYGHGAVTVAQTALQAGASCLGV 73

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLM---SC 118
            +V EG++LR    QA I +L   H P Q + I    L   I S  Q   +S  +     
Sbjct: 74  ATVPEGIQLREAGIQAPILILGATHTPEQIQAIAQWQLQATIGSPKQALIFSNTLETIQH 133

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG + Q+A +F           ++ + SHLA AD P   +   Q
Sbjct: 134 DSPIPVHIKLDTGMSRLGTNWQQAGEFVQLVERLPHLDIASVYSHLATADSPDPGIMEEQ 193

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM- 232
             RF   I+  K +        LA+S+  L  P  H+ + R G+++YG     +  + + 
Sbjct: 194 HRRFEEAIAQIKTLGIKIPSLHLANSAATLADPRLHYDMVRVGLAVYGLYPAPHLQNKIS 253

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            + V+  +ARI  ++   AG  VSYG Q     +  +AV +IGYADG P  LS       
Sbjct: 254 LKPVIQVQARITHVKTIAAGTGVSYGHQFIAPHEMRLAVVSIGYADGVPRNLSN------ 307

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  I+G  VP +G ITMD  M D +    ++ G+ + + G      I  DD A
Sbjct: 308 -----KMQVLIRGQRVPQIGAITMDQLMIDASALPDLQEGEIVTLLGKQGKEKITADDWA 362

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
            A  T ++++L     R  + 
Sbjct: 363 EALNTISWEVLCGFKHRLPRV 383


>gi|257481781|ref|ZP_05635822.1| alanine racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331009415|gb|EGH89471.1| alanine racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 357

 Score =  298 bits (764), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 108/370 (29%), Positives = 165/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREHSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIHAPVLLLEGFFEADELALIVEHNFWAVVHSTWQLEAIEQ-AQLARPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQSAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SFRKGLVA-ETSLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQAHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQASRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATLAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|284107226|ref|ZP_06386367.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829973|gb|EFC34252.1| Alanine racemase [Candidatus Poribacteria sp. WGA-A3]
          Length = 386

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 120/373 (32%), Positives = 183/373 (49%), Gaps = 23/373 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             IDL AL +N   +   L+      AV+K N YG G + +A AL   GV+ F V SV E
Sbjct: 12  AIIDLNALAHNLRELRRVLAPRVDILAVIKANGYGHGYKALAEALSQLGVRRFGVASVHE 71

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYAL 126
           GV LR       + V+ G+ PGQ K +   NLIP +S    +   S+ +S     +P  +
Sbjct: 72  GVLLREAGRLEDVIVMGGMLPGQVKDLVHANLIPTLSDADTMHALSREVSQHDRPYPIHV 131

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VDTG  RLG + +E L    +     L     +++HLA AD+P      +QL+RF   +
Sbjct: 132 KVDTGMRRLGFTTREVLPLLQSPAFSHLLSCQGLMTHLADADNPDPAFTLLQLDRFHETV 191

Query: 187 ----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTAEA 240
               ++        A+++ IL  P  H  + RPG+ LYG T   ++  P+  Q V++   
Sbjct: 192 SSLPANGPRPWRHAANTAAILWHPRAHLDMVRPGLLLYGYTPAQDRDVPVSLQPVLSLTT 251

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +++ ++ A  GE VSYG   +  RDS +A+  IGYA GY   LS             G+ 
Sbjct: 252 KVVHLKTAGKGEPVSYGDLYRTRRDSRLAILPIGYAHGYNRRLSNT-----------GEV 300

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            I     PI+G+I MDMT+ D+TD  +I+ GD + + G      I   D+A    +  Y+
Sbjct: 301 IIHDRRFPIVGRICMDMTVVDVTDDPTIKQGDDVILMGRSATQAITAYDLANWQDSIPYE 360

Query: 357 LLVRIGTRYAKFY 369
           +L  +G    + Y
Sbjct: 361 VLCNLGPNVPREY 373


>gi|71279952|ref|YP_269587.1| alanine racemase [Colwellia psychrerythraea 34H]
 gi|71145692|gb|AAZ26165.1| alanine racemase [Colwellia psychrerythraea 34H]
          Length = 360

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 188/371 (50%), Gaps = 18/371 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   +  I+L AL  N+  ++ L+ N+ T AV+K +AYG    K+A AL +  V+ F V
Sbjct: 4   TSRLTQAIINLDALVKNYQYLDNLASNSNTIAVLKADAYGHDASKVAHALSSE-VKVFAV 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             ++E + LR    +  + +L G       +I  + N   ++ S  QL +   +     S
Sbjct: 63  AFIDEALALRDAGIKNTVLILEGPFNESDFEIALENNFALMLHSNYQLEWLKSITP-EFS 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+VDTG NRLG  +++  +   +  + +     ++ SH A AD       + QL +
Sbjct: 122 GELWLKVDTGMNRLGFQVEQIDN-VMSQLSAQQINNLVLCSHFATADQIDCARPAKQLAK 180

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAE 239
            + L++ + G + S+A+S+GIL  P  H    R G++LYG +      KS P+   +T +
Sbjct: 181 LKALVAKH-GCKYSMANSAGILNWPESHGHYNRLGLALYGASPIGDSPKSQPLIPAMTLQ 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A II I     GE V YG   +  R++ +A  AIGYADGYP                G  
Sbjct: 240 ANIIAIHTVNVGESVGYGNNWQAERETKLATVAIGYADGYPRNAK-----------SGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            FI G   P++G+++MDM   DITD     +GD ++++G ++ +D VA  S T NY+LL 
Sbjct: 289 VFINGAQAPLVGRVSMDMITVDITDLKHTAIGDTVELWGKNLSIDIVAQNSDTINYELLT 348

Query: 360 RIGTRYAKFYT 370
           R+  R  + +T
Sbjct: 349 RVSKRVPRVFT 359


>gi|290958110|ref|YP_003489292.1| alanine racemase [Streptomyces scabiei 87.22]
 gi|260647636|emb|CBG70741.1| putative alanine racemase [Streptomyces scabiei 87.22]
          Length = 386

 Score =  298 bits (764), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 100/381 (26%), Positives = 164/381 (43%), Gaps = 29/381 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N  ++ A +  A   AVVK +AYG G  + A A   AG       + 
Sbjct: 13  RARAEIDLDALRANVRTLRARAAGAELMAVVKSDAYGHGAVRCARAAVEAGATWLGTATP 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           EE + LR      R+        G  +   + ++   +S +           + G+    
Sbjct: 73  EEALALRAAGLSGRLMCWLWAPGGPWREAVEADIDVAVSGLWALREVTDAARAAGLRARV 132

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G +  +  +    +   +   L +++ + SH ACAD+P       QL R
Sbjct: 133 QLKADTGLGRNGCAPGDWPELVTEALRAEAEGLVKVTGLWSHFACADEPGHPSIEAQLTR 192

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           FR +I+H      +     +A+S   L  P+  F L R GI++YG +            +
Sbjct: 193 FRDMIAHAEEQGVRPEVRHIANSPATLTLPDARFDLVRTGIAVYGVSPSPELGSAADLGL 252

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+   A + L++   AG  VSYG        + + +  +GYADG P   SG       
Sbjct: 253 RPVMRLSASLALVKHVPAGHGVSYGHHYVTPGATTLGLVPVGYADGVPRHASGT------ 306

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   + G    + G++ MD  + D+     +  GD + +FG     +   +D A 
Sbjct: 307 -----GPVLVGGKWRTVAGRVAMDQFVVDLGGDEPVA-GDEVVLFGAGDRGEPTAEDWAQ 360

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           A+GT  Y+++ RIGTR  + Y
Sbjct: 361 AAGTIAYEIVTRIGTRVPRVY 381


>gi|212633597|ref|YP_002310122.1| alanine racemase [Shewanella piezotolerans WP3]
 gi|254802381|sp|B8CIQ9|ALR_SHEPW RecName: Full=Alanine racemase
 gi|212555081|gb|ACJ27535.1| Alanine racemase [Shewanella piezotolerans WP3]
          Length = 358

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 106/366 (28%), Positives = 175/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALK+N   ++ L+ +++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISRKALKHNLARLHELAPSSKVMAVVKANGYGHGLLNVAQCLDN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR     A++ +L G    G    + + ++  V+    QL     +        
Sbjct: 61  LEEALALRTGGVTAKLLLLEGFFRIGDLTTLVEHDIETVVHHESQLEMLESINLT-KPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG S  +          N  + +   +++H ACAD+PS+   + Q   F
Sbjct: 120 VWLKVDSGMHRLGFSPAQFDATYQRLMANDNVAKPIHLMTHFACADEPSNPSTAEQQRVF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
            TLI    G + +LA+S+G L          RPGI+LYG +     +   H +   +   
Sbjct: 180 DTLIKGLPG-DRTLANSAGALFWQQSQADWIRPGIALYGVSPVFGDLGAKHGLMPAMDLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I IR+  AGE   YG      +D+ + V AIGY DGYP               LG  
Sbjct: 239 SQLIAIREHKAGESAGYGSYWTAEKDTNLGVVAIGYGDGYPRNA-----------PLGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VPI+G+++MDM   D+    + +VGD   ++G ++ +++VA   GT  Y+L+ 
Sbjct: 288 VLVNGRIVPIVGRVSMDMLTVDLGIDANDKVGDLAVLWGKELPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|73490240|dbj|BAE19797.1| alanine racemase [Pseudomonas fluorescens]
          Length = 357

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 168/370 (45%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREVTG-AKALAVIKADAYGHGAVRCAQALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A I +L G     E  +I + +   V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELPLIVEHDFWCVVHSLWQLDAIEQ-ARLAKPIH 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL   +                 +++SH A AD+     +  Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPNDYKAAYQRLQASANVAKIVLMSHFARADELDCTRSVEQVAVFL 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
              +     E SL +S  +L  P       RPG+ LYG +           +Q V+T E+
Sbjct: 179 GARADLTA-EISLRNSPAVLGWPRVPSDWVRPGLMLYGSSPFDEPQATASRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    +   I V A+GYADGYP                G   
Sbjct: 238 KVICVRELPAGEPVGYGARFITPKPMRIGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           F+ G    +LG+++MDM   D+TD     +G  ++++G +I   +VA A+ T  Y +   
Sbjct: 287 FVDGVRSQLLGRVSMDMLCIDLTDVPQAGLGSTVELWGKNILASEVATAADTIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-KRVPRLYS 355


>gi|114046202|ref|YP_736752.1| alanine racemase [Shewanella sp. MR-7]
 gi|123131743|sp|Q0HYW0|ALR_SHESR RecName: Full=Alanine racemase
 gi|113887644|gb|ABI41695.1| alanine racemase [Shewanella sp. MR-7]
          Length = 358

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 175/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   +  ++  AVVK N YG G   +A  L+      F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQASRSQVMAVVKANGYGHGLLNVANCLHT--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +AR+ +L G        ++   ++  V+    Q+    +  +      
Sbjct: 61  LEEALELRAGGVKARLLLLEGFFRSTDLPLLVAHDIDTVVHHESQIEMLEQ-ATLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++        +    + +   +++H ACAD+P ++   VQ++ F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFAQVYARLTACDNVAKPIHLMTHFACADEPENNYTQVQMQTF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NQLTADLPGFRT-LANSAGALYWPKSQGDWIRPGIALYGVSPVTGDCGANHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R   AG+ V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVRDHKAGQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+    + +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGADAADQVGDEALLWGAALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|261346560|ref|ZP_05974204.1| alanine racemase [Providencia rustigianii DSM 4541]
 gi|282565263|gb|EFB70798.1| alanine racemase [Providencia rustigianii DSM 4541]
          Length = 360

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/364 (31%), Positives = 183/364 (50%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+ N+R  AVVK NAYG G   +   +    V  F V  + E + 
Sbjct: 8   INRRALRHNLQRVRELAPNSRLIAVVKANAYGHGLVGVGTEVQEL-VDGFGVARLNEALL 66

Query: 71  LRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G       +++ + N+  VI  V QL                +++D
Sbjct: 67  LRHQGINKPIVLLEGFFEQSDLQLMVEYNIDTVIHCVEQLEMLES-AQLAKQIKVWMKLD 125

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           TG +RLG+  Q A  F       + +     I+SH   AD P     + Q+E F+  +S 
Sbjct: 126 TGMHRLGVLPQHAESFYQRLQSCQNVDLPINIVSHFCQADAPELPTTAKQIECFQQFVSD 185

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILI 245
             G E S+A+S+GILL P  H+   RPGI +YG + +  KS     +  V+T ++ +I +
Sbjct: 186 KPG-EKSIAASAGILLWPEAHYDWVRPGIMMYGASPQEGKSAASFGLLPVMTLKSSLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AG+ V YG   +  R++L+ V AIGY DGYP             V  G    + G 
Sbjct: 245 REHSAGQCVGYGETWRSERNTLLGVVAIGYGDGYPRN-----------VPSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G+I+MDMT+ D+    + +VGD + ++G  + ++++A  +G  NY+LL ++ +R 
Sbjct: 294 KVPIIGRISMDMTVVDLGPDSTDKVGDDVILWGNALPVEEIAAQTGIINYELLTKLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMEY 357


>gi|146291864|ref|YP_001182288.1| alanine racemase [Shewanella putrefaciens CN-32]
 gi|254802380|sp|A4Y3F6|ALR_SHEPC RecName: Full=Alanine racemase
 gi|145563554|gb|ABP74489.1| alanine racemase [Shewanella putrefaciens CN-32]
 gi|319425098|gb|ADV53172.1| alanine racemase [Shewanella putrefaciens 200]
          Length = 358

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   +  ++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQASASQVMAVVKANGYGHGLLNVANCLVN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +AR+ +L G        ++   ++  V+    Q+    ++        
Sbjct: 61  LEEALELRAGGVKARLLLLEGFFRSTDLPLLVAHDIDTVVHHESQIEMLEQVKLT-KPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++             + +   +++H ACAD+P +H   VQ+  F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFATVYARLMACPNIAKPIHLMTHFACADEPDNHYTDVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NELTAGLPGFRT-LANSAGALYWPKSQGDWIRPGIALYGVSPVAGDCGTNHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVRDHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+    + +VGD + ++G D+ +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDATDKVGDDVLLWGQDLPVEEVAERIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|224367598|ref|YP_002601761.1| Alr [Desulfobacterium autotrophicum HRM2]
 gi|223690314|gb|ACN13597.1| Alr [Desulfobacterium autotrophicum HRM2]
          Length = 387

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 161/397 (40%), Gaps = 38/397 (9%)

Query: 1   MHSNEFL----RLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNA 55
           M +          +IDL A+ +N  ++ AL+  +    AVVK +AYG G  ++A     +
Sbjct: 1   MKTENPPASLVWRQIDLDAIAHNLKTLRALTKAHTAVMAVVKADAYGHGAVRVAKKALES 60

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           GV    V  + E ++LR     A I V   I       +    + P +  +      S+ 
Sbjct: 61  GVTHLGVARLHEALELRNAGINAPILVFGYIPESDVDTLIALEVSPTVFDLETACMLSER 120

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQE---------ALDFTHNSFNKKLGQLSLIISHLA 165
                +H    L+VDTG  RLG+             AL            ++  I +H A
Sbjct: 121 AVAKGTHIKIHLKVDTGMGRLGILPDSRRPSSEKKGALAEVLTISALPGLKIEGIYTHFA 180

Query: 166 CADDPSSHVNSVQLERFRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLY 220
            AD         Q + F   I    + GIE  L  S+     +  P  HF + R GI++Y
Sbjct: 181 AADTLDKGYAEYQHQTFMAFIEGLKHLGIEIPLVHSANSAALIDLPEAHFNMVRAGIAMY 240

Query: 221 GGTDKINKSHPM---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           G              +  +   + I  ++K      VSYG   +  ++++IA   IGYAD
Sbjct: 241 GLAPSGEVDIRSLDLRPAMEIHSIITSVKKVPKSFKVSYGMTYETEKETVIAAVPIGYAD 300

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           G+    S             G+  ++G   PI G++ MD T+ D+ +   ++ GD + I 
Sbjct: 301 GFSRLFSSR-----------GEMIVRGRKAPIAGRVCMDQTLIDVGEIPGVKPGDEVVIL 349

Query: 338 GPD----IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
           G      I  D++A   GT NY+++  +  R  K Y+
Sbjct: 350 GTQANQRITADEMAETIGTINYEVISSLTARVPKIYS 386


>gi|91791886|ref|YP_561537.1| alanine racemase [Shewanella denitrificans OS217]
 gi|122968993|sp|Q12RW2|ALR_SHEDO RecName: Full=Alanine racemase
 gi|91713888|gb|ABE53814.1| alanine racemase [Shewanella denitrificans OS217]
          Length = 363

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 20/368 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAP--ALYNAGVQDFFV 62
            F R +I   AL+ N   +  L+  ++  AVVK N YG G   +A   A Y+ G   F +
Sbjct: 3   PFPRAEISRKALQANLARIRELAPQSKIMAVVKANGYGHGLLNVANSVATYDQGADGFGL 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             +EE ++LR     AR+ +L G        ++   ++  V+    Q+    +       
Sbjct: 63  ARLEEALELRSGGVNARLLLLEGFFRVTDLPLLVQHHIDTVVHHESQVEMLEQAELT-TP 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLE 180
               +++DTG +RLG SL +               +   +++H AC+D+P +     Q++
Sbjct: 122 VTVWMKIDTGMHRLGFSLAQFDAIYQRLLACHNIAKPIHLMTHFACSDEPDNSFTQAQID 181

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
            F ++ +   G + SLA+S G+L  P       R GI+LYG +  +     +H +   + 
Sbjct: 182 AFESVTASLDG-DRSLANSGGMLFWPQSQRDWIRAGIALYGVSPMVGDKGGNHGLVPAME 240

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++I ++   AG+ V YG   +  +D+ I V AIGY DGYP                G
Sbjct: 241 LKSQLISVKDHQAGDSVGYGAFWRARKDTRIGVVAIGYGDGYPRHA-----------PEG 289

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              ++ G  VPI+G+++MDM   D+      +VGD + ++G  + +++VA   GT  Y+L
Sbjct: 290 TPVWLNGRRVPIVGRVSMDMLTVDLGLDSQDKVGDEVLLWGSALAVEEVADHIGTIAYEL 349

Query: 358 LVRIGTRY 365
           + ++  R 
Sbjct: 350 VTKLTPRV 357


>gi|146305685|ref|YP_001186150.1| alanine racemase [Pseudomonas mendocina ymp]
 gi|145573886|gb|ABP83418.1| alanine racemase [Pseudomonas mendocina ymp]
          Length = 358

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+ +N+      +   +  AVVK NAYG G  ++  AL+      F V S
Sbjct: 2   RPLAAIVDLSAIAHNYAVAKRCAPGRQAFAVVKANAYGHGVREVVTALHEV-ADGFAVAS 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R    +ARI +L G     E  I     + ++                     
Sbjct: 61  LEEAAEVRAMHGEARILLLEGCFEASEYAIAAQLGLDLVVQSAAQADALLACEPARPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +       +      ++SH ACAD+    +  +Q+ERF  
Sbjct: 121 WLKLDSGMHRLGFDAASLRQWHARLEMAEQVAELNLLSHFACADERGHPLTELQVERFLD 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
           L+        SLA+S+ +L  P  H    RPGI LYG T   +   +   ++  +T  AR
Sbjct: 181 LLDLDFN-HRSLANSAAVLTIPAAHMDWLRPGIMLYGATPFADFSARELGLKPAMTLAAR 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R S IA  + GYADGYP                G    
Sbjct: 240 VIAVRQVAVGESVGYGATWVAERPSRIATVSCGYADGYPRHA-----------PSGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G   P+ G+++MDM   DITD   + +   ++++G  + +D+VA ASGT  Y+LL ++
Sbjct: 289 VDGQRAPLAGRVSMDMLTVDITDLPEVGIDSSVELWGAQLPVDEVAHASGTIGYELLTKV 348

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 349 TARVPRRY 356


>gi|218245760|ref|YP_002371131.1| alanine racemase [Cyanothece sp. PCC 8801]
 gi|218166238|gb|ACK64975.1| alanine racemase [Cyanothece sp. PCC 8801]
          Length = 403

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 170/379 (44%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++I+  AL +N   +  L S      AVVK +AYG G  K+A    +AG     +
Sbjct: 24  RQRAWVEINQQALIHNVAEIKGLLSPKTALMAVVKADAYGHGAIKVAQTALDAGANGLAI 83

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            ++ EG++LR     A I +L  I+  +E        +      PQ        L   G 
Sbjct: 84  ATLGEGIELREAGITAPILILGAINTSEEIAAIAQWQLQPTLCNPQQALIFSDTLSKLGQ 143

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  L++DTG +RLG    +A DF          +++ I SHLA ADDP       Q  
Sbjct: 144 TLPVHLKLDTGMSRLGTPWHQATDFVRLVQQLPYLKIATIYSHLATADDPDRSEMERQHR 203

Query: 181 RFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQ 233
           RF+  I+  K           A+S+  L+ PN H+ L R G++LYG     +      ++
Sbjct: 204 RFKQAIAQLKSHGLPLPPLHFANSAATLVNPNLHYDLVRVGLALYGLYPAPHLRSFADLK 263

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A++  ++    G  VSYG Q    R   +AV  IGYADG P  LS         
Sbjct: 264 PVLQVKAKVTQVKTIPPGTGVSYGYQFVSDRTMDVAVVGIGYADGVPRNLSNRL------ 317

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  I+G  V  +G ITMD  M D++   +++VG+ + + G D    I  DD A  
Sbjct: 318 -----EVLIRGQRVRQIGAITMDQLMLDVSAIPNLQVGEVVTLIGKDGDQEITADDWANK 372

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 373 LGTISWEILCGFKHRLPRI 391


>gi|239825783|ref|YP_002948407.1| alanine racemase [Geobacillus sp. WCH70]
 gi|239806076|gb|ACS23141.1| alanine racemase [Geobacillus sp. WCH70]
          Length = 387

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/375 (24%), Positives = 149/375 (39%), Gaps = 26/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A+  N   +   L  + R  AVVK NAYG G  ++A     AG     V  +
Sbjct: 9   TWAEIDLDAIYYNVSQLKNFLQNDIRIMAVVKANAYGHGDVQVAKTALEAGASYLAVAFL 68

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I VL    P    I     +   +     +   + + S      + 
Sbjct: 69  DEAIALRKKGVTAPILVLGACRPSDINIAAKHRITLTVFQPEWIEQAANVYSETSPVLFH 128

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L++DTG  RLG+  + E               L    +H A AD+ ++   S Q + F  
Sbjct: 129 LKMDTGMGRLGVREETETKRVIEQIDRHPYFSLEGAYTHFATADEINTDYFSFQYDNFLR 188

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV----TA 238
           ++         +   +S+  L  P+  F + R GIS+YG +        +   +    + 
Sbjct: 189 MLEWLPYKPPIIHCGNSATALRFPDKAFNMVRFGISMYGLSPSPEIKQYLPYELKEAFSL 248

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +R++ ++K   GE VSYG       +  +    IGYADG+   L               
Sbjct: 249 HSRLVHVKKLKPGEKVSYGATYTAETEQWVGTVPIGYADGWLRKLQNF------------ 296

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              + G   PI+G+I MD  M  +   + +  G  + + G      I +DDVA   GT N
Sbjct: 297 HVLVNGEKAPIIGRICMDQLMVRLPKQMPV--GTKVTLIGRQGDEYISVDDVAQYLGTIN 354

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   I  R  + +
Sbjct: 355 YEVPCTISYRVPRIF 369


>gi|312135627|ref|YP_004002965.1| alanine racemase [Caldicellulosiruptor owensensis OL]
 gi|311775678|gb|ADQ05165.1| alanine racemase [Caldicellulosiruptor owensensis OL]
          Length = 390

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL  L  N  ++        +  AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEIDLDNLVYNLENIKKKILPQTKIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + SK     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSKAAQKIGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLE 180
              ++VDTG  R+G    +++++   N       +L  I SH  +  D  S      Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCEQSVNTILNIAKLPNIELEGIFSHFSSADDPDSDDFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPNSSLKEHINLK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSIKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGKQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEVVCSFSKRIPRVY 376


>gi|297201785|ref|ZP_06919182.1| alanine racemase [Streptomyces sviceus ATCC 29083]
 gi|297147954|gb|EFH28798.1| alanine racemase [Streptomyces sviceus ATCC 29083]
          Length = 389

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 166/382 (43%), Gaps = 30/382 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N  ++ A +  A   AVVK +AYG G    A A   AG +     + 
Sbjct: 13  RARAEIDLAALRANVRALRARASGAALMAVVKSDAYGHGAVPCARAAVEAGARWLGTATP 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPY 124
           EE + LR      RI        G  +   + +L   +S +  L    +     GV    
Sbjct: 73  EEALALRKAGLPGRIMCWLWTPGGPWREAIEADLDVSVSGMWALRELVAAAREAGVPARV 132

Query: 125 ALQVDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            L+ DTG  R G        E +     + ++ L +++ + SH ACAD+P     + QL 
Sbjct: 133 QLKADTGLGRNGCQPGEDWAELVAEALRAQSEGLLRVTGLWSHFACADEPGHPSITAQLT 192

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHP 231
            FR +++H +G         +A+S   L  P  HF L R GI+ YG +            
Sbjct: 193 LFREMLAHAEGRGVRPEVRHIANSPATLTLPESHFDLVRTGIATYGISPSPELGVPGDFG 252

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T  A I L+++   G  VSYG +     D+ + +  +GYADG P   SG      
Sbjct: 253 LRPVMTLSASIALVKRVPGGHGVSYGHRYVTPGDTTLGLVPVGYADGIPRHASG------ 306

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                 G   + G    + G+I MD  + D+        G    +FGP    +   +D A
Sbjct: 307 -----AGPVLVDGKWRTVAGRIAMDQFVVDLGGDEPP-TGTRAVLFGPGDRGEPTAEDWA 360

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
            A+GT  Y+++ RIGTR  + Y
Sbjct: 361 QAAGTIAYEIVTRIGTRVPRVY 382


>gi|300854387|ref|YP_003779371.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
 gi|300434502|gb|ADK14269.1| alanine racemase [Clostridium ljungdahlii DSM 13528]
          Length = 386

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 165/384 (42%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N   +  +++L  L  N  ++ A +       VVK +AYG G  +++  L   G   
Sbjct: 1   MFRNYRPVWAEVNLDNLAYNMRNIKAQTMTKEIFGVVKADAYGHGALEVSKVLLENGATR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
             V  + EG++LR       I +L          +   +L PV+ S       S+  +  
Sbjct: 61  LSVAVLSEGIELRKGGITCPINILGVTPSTLFPDLIGYSLEPVVFSYEYAKSLSEYANSK 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  L VD+G  R+G    E  ++           ++  + SH + AD+     +  
Sbjct: 121 NKKVKVHLAVDSGMGRIGFLPTEHNVEEAVKISKISNIEIESVFSHFSTADEKDKKYSKF 180

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           Q +++R  ++  K          +++S+ I+  P  +    RPGI LYG           
Sbjct: 181 QFDKYRWFVNELKEKGLNIKIRDISNSAAIVDLPETYCDGVRPGIILYGYYPSDEVDKSR 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T +A ++ ++    G+ V YG + K  R ++IA   +GYADGY   LSG    
Sbjct: 241 LDIKPVMTLKASVVYLKTLNEGQYVGYGRRFKTERRTVIATLPVGYADGYTRILSG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                    K  I G + P++G I MD  M D+TD   +++GD + + G D       +D
Sbjct: 297 -------KLKVIINGKLAPVIGNICMDQCMIDVTDIEDVKIGDEVILMGSDGKVKFDAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y++L  +  R  + Y
Sbjct: 350 IAKLLGTISYEVLCMVNKRVPRVY 373


>gi|307150203|ref|YP_003885587.1| alanine racemase [Cyanothece sp. PCC 7822]
 gi|306980431|gb|ADN12312.1| alanine racemase [Cyanothece sp. PCC 7822]
          Length = 407

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 174/379 (45%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                ++ID  AL +N  S+   LS +    AVVK +AYG G  ++A     AG     +
Sbjct: 25  RHRAWIEIDHHALAHNIRSIKQILSPSTALMAVVKADAYGHGAVRVAQTALQAGATWLAI 84

Query: 63  TSVEEGVKLRLYTPQARIFVLY-GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
            ++ EG++LR     A I +L     P +   I    L P + +  Q   +S+ ++    
Sbjct: 85  ATLGEGIELREAGIAAPILILGAINTPAEIATIAQWKLQPTLCNPQQALVFSETLTKLDQ 144

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           S P  L++DTG +RLG    EA  F          +++ I SHLA ADDP   V  +Q +
Sbjct: 145 SLPVHLKLDTGMSRLGTIWTEAAAFVQLVQQLPYLKIASIYSHLATADDPDPTVMRLQHQ 204

Query: 181 RFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQ 233
           RF   I+  K           A+S+  L  P+ H+ L R G+ LYG     +  +S  ++
Sbjct: 205 RFEAAIAEIKANGITPPRLHFANSAATLTDPSLHYDLVRVGLGLYGLYPAPHLRESVDLK 264

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +AR+  ++   AG  VSYG Q    R   IAV  IGYADG    LS         
Sbjct: 265 PVLQVKARVTQVKTIPAGTGVSYGYQFISDRPLRIAVVGIGYADGVQRNLSNRL------ 318

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  ++G  +  +G ITMD  M D+++   ++ G+ + + G D    I  D+ A  
Sbjct: 319 -----EVLVRGQRISQIGAITMDQLMLDVSNIPDLQAGEVVTLIGKDQDQEITADEWADK 373

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 374 LGTISWEILCGFKHRLPRV 392


>gi|260770257|ref|ZP_05879190.1| alanine racemase biosynthetic [Vibrio furnissii CIP 102972]
 gi|260615595|gb|EEX40781.1| alanine racemase biosynthetic [Vibrio furnissii CIP 102972]
          Length = 387

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 174/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL AL++N+  + ALSG+ +  AV+K +AYG G  ++A AL +     F V+ +E
Sbjct: 4   AQAHIDLNALQHNYRRLKALSGSQQVVAVIKGDAYGHGAVQLASALPD--ADRFAVSRLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  +LRL      I +L G     +        +       +     +  +        L
Sbjct: 62  EAEELRLAGITQPILLLEGCFCADDLKRAAELKLDTTIHCEEQLHDLETSTLAHPIHVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRTL 185
           +VDTG +RLG+   +  ++                ISH +CADD +      QL  F   
Sbjct: 122 KVDTGMHRLGVQPFQVPEYVSRIERTHKLNEKLGFISHFSCADDINHPTTQRQLACFNQA 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            + Y G   ++A+S+GIL  P   F + R GI+L+G +         H +  V+T   R+
Sbjct: 182 TAQYDG-PKTIANSAGILFWPESQFDVARAGIALFGISPSAEHTGRDHALVPVMTLNTRL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  A   V YG      +D+ I V A+GY DGYP +              G   F+
Sbjct: 241 IAVRKHQASRPVGYGETWHAQQDTHIGVIAMGYGDGYPRSA-----------PSGTPVFV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G +VPI+G+++MDM   D+    + +VGD ++++G ++ ++ +A   GT  Y+L +++ 
Sbjct: 290 NGRLVPIVGRVSMDMITVDLGPDATDQVGDVVEMWGKNLPIETIANHVGTIPYELTIKLT 349

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 350 PRVHRHY 356


>gi|154249706|ref|YP_001410531.1| alanine racemase [Fervidobacterium nodosum Rt17-B1]
 gi|154153642|gb|ABS60874.1| alanine racemase [Fervidobacterium nodosum Rt17-B1]
          Length = 364

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/377 (27%), Positives = 161/377 (42%), Gaps = 26/377 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S       I++    +N          A+   VVK NAYG G  ++A A    G+  F
Sbjct: 1   MES-RRTYAVINVRNYLDNLRFFQTHCAPAKVMPVVKANAYGHGAVQLAKAAQKIGIDYF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR +     I V   I P    I  + N+   + S  QL  Y+K +    
Sbjct: 60  AVAFLEEAIELRKHGISKDILVFNYIEPDLLHIAMENNITITLYSWEQLWKYTKYV---W 116

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSV 177
                +++DTG  RLG+  +EA DF   S      ++    +H A AD            
Sbjct: 117 RPKAHIKIDTGMRRLGVYPEEAKDFI-ESARNVGFEVEGAYTHFAVADSLDDEDVKFTQQ 175

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-KSHPMQTVV 236
           Q+E+F   ++    I+    S + +    N  F   R GI+ YG     +  S  ++ V+
Sbjct: 176 QVEKF-ANLNLDVKIKHLCNSGASVSKIVN-CFDYVRVGIASYGLQPSDSVYSEQLKPVL 233

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + +  +  ++    G+ VSYG   K   +  IA   +GYADGY   LS            
Sbjct: 234 SWKTTVSHVKTIQPGDSVSYGRTFKAFTEMRIATIPVGYADGYWRHLSN----------- 282

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   I G   PI+G++ MD  M D+T    +++GD + + G      I  +++A   GT
Sbjct: 283 KGYVLIHGEKCPIIGRVCMDQFMVDVTHLEDVKIGDEVILIGKQGDNIITAEEIAKLVGT 342

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++  RI  R  + Y
Sbjct: 343 INYEVTCRISERVPRKY 359


>gi|237797761|ref|ZP_04586222.1| alanine racemase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020611|gb|EGI00668.1| alanine racemase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 357

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 167/370 (45%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AV+K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARALIDLQALRHNYQLARESSGG-KALAVIKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A I +L G     E  +I + +L  V+ ++ QL    K         
Sbjct: 60  IEEALELRAAGLRAPILLLEGFFEADELALIVEHDLWTVVHTIWQLEAIEK-ARLDKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 ++++H ACAD+  S  ++ Q   F 
Sbjct: 119 VWLKLDTGMHRVGLYPSEYRAAHQRLLASGKVAKVVLMTHFACADELDSPSSAEQYAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEA 240
                    E SL +S  +L  P      +R GI LYG T        +  +Q V+T E+
Sbjct: 179 ATCQGL-AAETSLKNSPAVLGWPKIRSDWSRTGIMLYGATPFGQSQPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   + VAA+GYADGYP                G   
Sbjct: 238 KIISVREVPAGEAVGYGATFVSDRPLRVGVAAMGYADGYPRHA-----------PSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T      +G  ++++G  +   +VA  + T  Y +   
Sbjct: 287 HVDGQRSRLIGRVSMDMLCVDLTGLPQARLGSRVELWGKGVLASEVAAQAETIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|294139221|ref|YP_003555199.1| alanine racemase [Shewanella violacea DSS12]
 gi|293325690|dbj|BAJ00421.1| alanine racemase, biosynthetic [Shewanella violacea DSS12]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 104/366 (28%), Positives = 177/366 (48%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALKNN   +  ++  ++  AVVK N YG G   +A  + +     F +  
Sbjct: 3   PFPRAEISCKALKNNLARLRQIAPASKIMAVVKANGYGHGLLNVAKCIED--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR     +++ +L G   P     +   ++  V+ +  QL    +  S      
Sbjct: 61  LEEAIALRDGGVTSKLILLEGFFRPVDLTTLVMKDIETVVHNEKQLEMLEQ-ASLSKPAN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++DTG +RLG + ++         +  ++ +   I+SH ACAD+P +     QL  F
Sbjct: 120 VWLKLDTGMHRLGFTPEQFEHVYARLLDCPQVAKPIKIMSHFACADEPDNPYTREQLNIF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L  +  G E +LA+S+G L  P+ H    RPGISLYG +     + K+H +Q  +   
Sbjct: 180 NRLAKNLPG-ETTLANSAGTLYWPDSHKDWVRPGISLYGVSPVVGDLGKNHGLQPAMELI 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I IR+  AG+   YG   +   ++ + V AIGY DGYP                G  
Sbjct: 239 SQLIAIREHKAGDPAGYGCYWRAKEETKLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G +VPI+G+++MDM   D+    +  +GD   ++G  + ++ VA   GT  Y+L+ 
Sbjct: 288 VWVNGRLVPIVGRVSMDMLTVDLGLDSTDSIGDEAIMWGSALPVEVVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|189425818|ref|YP_001952995.1| alanine racemase [Geobacter lovleyi SZ]
 gi|189422077|gb|ACD96475.1| alanine racemase [Geobacter lovleyi SZ]
          Length = 380

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/386 (27%), Positives = 170/386 (44%), Gaps = 28/386 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +     +IDL AL+ N+  + +   + +   AVVK +AYG G  +++  L   GV  
Sbjct: 1   MFDSRPTFAEIDLGALRENYSVVRSSVPSRSAVLAVVKADAYGHGFLEVSKELERQGVDA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V  + E ++LR       + +L GI+PGQE+      +   + S+ QL          
Sbjct: 61  FGVAFLAEAIQLRKAGIDKPVLLLGGIYPGQERKCVGYGISSAVFSLEQLKALDLAAGKL 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VN 175
                  L+VDTG  RLG+   +     +         L  +ISH A AD+         
Sbjct: 121 YRKALVHLKVDTGMGRLGIPYDQVPALLNALKLLPNIYLEGVISHFASADELDESGQYFT 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
            +Q ERF   +       +      +A+S+G LL       L RPGI+LYG     +   
Sbjct: 181 RLQGERFGWAVEQIRKAGFSPRYIHIANSAGALLNDYPFCNLVRPGIALYGALPSPDFQG 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V+  +++I +++       +SYG +    + +LIA   +GYADGYP  L+    
Sbjct: 241 RLSLRPVMRLKSKIAMLKWVEPATTISYGRRFTAEQRTLIASVPVGYADGYPRALTN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK-----L 343
                    G+  ++G    + G + MD  M D+T    + VGD + + G D K      
Sbjct: 298 --------KGQVLVRGERAQVSGTVCMDWLMLDVTHIPGVAVGDDVTLIGEDRKGNTVFA 349

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           ++VA  +GT  Y+LL  I  R  + Y
Sbjct: 350 EEVAHWAGTIPYELLCGISKRVPRVY 375


>gi|120600208|ref|YP_964782.1| alanine racemase [Shewanella sp. W3-18-1]
 gi|254802384|sp|A1RNI3|ALR_SHESW RecName: Full=Alanine racemase
 gi|120560301|gb|ABM26228.1| alanine racemase [Shewanella sp. W3-18-1]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   +  ++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQARASQVMAVVKANGYGHGLLNVANCLVN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +AR+ +L G        ++   ++  V+    Q+    ++        
Sbjct: 61  LEEALELRAGGVKARLLLLEGFFRSTDLPLLVAHDIDTVVHHESQIEMLEQVKLT-KPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++             + +   +++H ACAD+P +H   VQ+  F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFATVYARLMACPNIAKPIHLMTHFACADEPDNHYTDVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NELTAGLPGFRT-LANSAGALYWPKSQGDWIRPGIALYGVSPVAGDCGTNHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVRDHKANQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+    + +VGD + ++G D+ +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDATDKVGDDVLLWGQDLPVEEVAERIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|95930765|ref|ZP_01313498.1| alanine racemase [Desulfuromonas acetoxidans DSM 684]
 gi|95133245|gb|EAT14911.1| alanine racemase [Desulfuromonas acetoxidans DSM 684]
          Length = 371

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 110/380 (28%), Positives = 180/380 (47%), Gaps = 22/380 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M +     + IDL AL++N+H +   +  + R  AVVK +AYG G   +A  L  AG   
Sbjct: 1   MKAYRPTHVAIDLDALRHNYHVLRETMRPDWRMLAVVKADAYGHGAVPVARTLEEAGADL 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V  VEEG++LR       I +L G  PGQE ++ + +L   +  + QL          
Sbjct: 61  FGVAIVEEGLELRAAGITRPILMLGGPWPGQEPVVIEHDLHVAVFEIEQLQRLEHAARQA 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G S    L++D+G  RLG+  ++  +        +  QL  I++H A AD P   + + Q
Sbjct: 121 GKSCFCHLKIDSGMGRLGVRDEQLDEVLRFFLASEALQLVGIMTHFALADCPDHPLTAQQ 180

Query: 179 LERFRTLISHYKG---IEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINKSHPMQ 233
              F+  ++  +    I   + SS+      + +    L RPGI+LYGG    +++ P++
Sbjct: 181 QAHFKRALAKVRDAGLIPEYIHSSNSAATFSDVNGGCNLVRPGIALYGGQPFEDRTLPLE 240

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+     I  +++   G  VSYG +    R +LIA   +GYADGY   LS         
Sbjct: 241 PVMALRTEIAHLKQLPTGSGVSYGHRFIAQRPTLIAAIPVGYADGYNRLLSNC------- 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G   ++G  V + G + MD T+ D+TD  +++ GD + + G D    +  +  A  
Sbjct: 294 ----GTALVRGQKVAVAGTVCMDWTLLDVTDVANVQCGDRVTLLGCDGDECVLAEQWAEK 349

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++  +I  R  + Y
Sbjct: 350 VGTISYEVFCQISKRVPRHY 369


>gi|260773674|ref|ZP_05882590.1| alanine racemase biosynthetic [Vibrio metschnikovii CIP 69.14]
 gi|260612813|gb|EEX38016.1| alanine racemase biosynthetic [Vibrio metschnikovii CIP 69.14]
          Length = 365

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 105/373 (28%), Positives = 175/373 (46%), Gaps = 18/373 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +  +  IDL AL+ N   +   + +++  AVVK N YG G  ++A    +     F
Sbjct: 1   MNYMKAAKASIDLQALQYNLQRIKQQAPSSKVMAVVKANGYGHGSCQVARYAQD--ADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  ++E ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 59  GVARIQEALQLRANGIVKPILLLEGFYSAGDLPVLMTNNIQTVVHCEEQLQALERAQLDT 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L++D+G +RLG+  ++  +F         + +    +SH  CAD+ +S +   Q+
Sbjct: 119 PVSVWLKIDSGMHRLGVRPEQHAEFVERLHRCPNVAKPLRYMSHFGCADELNSPITRQQI 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
           E F +L    KG E SLA+S+G+L  P       RPGI LYG +   ++       + V+
Sbjct: 179 ELFLSLTEGCKG-ERSLAASAGLLAWPESQLDWVRPGIILYGVSPFAHQDAQAMGYRPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A +I +R+  AGE + YG      R++ I V AIGY DGYP T              
Sbjct: 238 TLTAPLIAVREVKAGESIGYGALWTAQRETKIGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G +VP+ G+++MDM   D+       VGD   ++G D+ ++ VA   GT  Y+
Sbjct: 287 GTPVLVNGRIVPMAGRVSMDMLTVDLGPESQDNVGDEAILWGQDLPVERVAEHIGTVGYE 346

Query: 357 LLVRIGTRYAKFY 369
           L+ ++ +R    Y
Sbjct: 347 LVTKLTSRVEMHY 359


>gi|315182757|gb|ADT89670.1| alanine racemase [Vibrio furnissii NCTC 11218]
          Length = 387

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 107/367 (29%), Positives = 178/367 (48%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL AL++N+  + ALSG+ +  AV+K +AYG G  ++A AL +     F V+ +E
Sbjct: 4   AQAHIDLNALQHNYRRLKALSGSQQVVAVIKGDAYGHGAVQLASALPD--ADRFAVSRLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  +LRL      I +L G     +        +       +     +  +        L
Sbjct: 62  EAEELRLAGITQPILLLEGCFCADDLKRAAELKLDTTIHCEEQLHDLETSTLAHPIHVWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VDTG +RLG+   +  ++       +KL +    ISH +CADD +      QL  F   
Sbjct: 122 KVDTGMHRLGVQPFQVPEYVSRIERTRKLSEKLGFISHFSCADDINHPTTQRQLACFNQA 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            + Y G   ++A+S+GIL  P   F + R GI+L+G +         H +  V+T   R+
Sbjct: 182 TAQYDG-PKTIANSAGILFWPESQFDVARAGIALFGISPSAEHTGRDHALVPVMTLNTRL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  A   V YG      +D+ I V A+GY DGYP +              G   F+
Sbjct: 241 IAVRKHQASRPVGYGETWHAQQDTHIGVIAMGYGDGYPRSA-----------PSGTPVFV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G +VPI+G+++MDM   D+    + +VGD ++++G ++ ++ +A   GT  Y+L +++ 
Sbjct: 290 NGRLVPIVGRVSMDMITVDLGPDATDQVGDVVEMWGKNLPIETIANHVGTIPYELTIKLT 349

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 350 PRVHRHY 356


>gi|328884469|emb|CCA57708.1| Alanine racemase [Streptomyces venezuelae ATCC 10712]
          Length = 382

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 168/384 (43%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +IDL AL+ N  ++ A  + + R  AVVK +AYG G  + A A  +AG       
Sbjct: 8   RRARAEIDLGALRANVRTLRARVAPHVRIMAVVKADAYGHGAVRCARAALDAGADWLGTA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
           +  E + LR         + +   PG       +  L   +S +  L    +     G  
Sbjct: 68  TPHEALALRAAGITDVPVMCWLWTPGDPWDQGIEAGLDMSVSGMWALEEVVRAARATGGV 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQ 178
               L+ DTG  R G    +  +    +   +   L +++ + SH ACAD+P     + Q
Sbjct: 128 ARVQLKADTGLGRNGCQPADWPELVGEALKAEAEGLVEVTGLWSHFACADEPHHPSIAAQ 187

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
           L+ FR+++     +  +     +A+S   L  P  HF L RPGI++YG +          
Sbjct: 188 LDVFRSMLDYAEKAGVRPEVRHIANSPATLTLPEAHFDLVRPGIAMYGVSPSPELGTSAE 247

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++ +A + L+++  AG  VSYG       ++ + +  +GYADG P   SG    
Sbjct: 248 LGLRPVMSLKASVALVKRVPAGHGVSYGHHYVTDAETTLGLVPLGYADGVPRHASGR--- 304

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G   + G +  + G++ MD  + D+   +    G    +FGP    +   +D
Sbjct: 305 --------GPVLVDGTVRTVAGRVAMDQFVVDLGGDVPA-PGTEAVLFGPGDLGEPTAED 355

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A+A+ T  Y+++ RIG R  + Y
Sbjct: 356 WAVAADTIAYEIVTRIGARVPRVY 379


>gi|160873869|ref|YP_001553185.1| alanine racemase [Shewanella baltica OS195]
 gi|304411180|ref|ZP_07392795.1| alanine racemase [Shewanella baltica OS183]
 gi|307306475|ref|ZP_07586218.1| alanine racemase [Shewanella baltica BA175]
 gi|254802377|sp|A9L126|ALR_SHEB9 RecName: Full=Alanine racemase
 gi|160859391|gb|ABX47925.1| alanine racemase [Shewanella baltica OS195]
 gi|304350373|gb|EFM14776.1| alanine racemase [Shewanella baltica OS183]
 gi|306910766|gb|EFN41194.1| alanine racemase [Shewanella baltica BA175]
 gi|315266096|gb|ADT92949.1| alanine racemase [Shewanella baltica OS678]
          Length = 358

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 18/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N F R +I  +AL+ N  ++   +  +R  AVVK N YG G   +A  L +     F + 
Sbjct: 2   NPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVANCLVS--ADGFGLA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR     AR+ +L G     +  +   + I  +          +         
Sbjct: 60  RLDEALELRAGGVTARLLLLEGFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG + ++             + +   +++H ACAD+P +   SVQ+  F
Sbjct: 120 VWLKVDSGMHRLGFTPEQFSTVYDRLMACSNVAKPIHLMTHFACADEPDNTYTSVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
            TL +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NTLTAGLPGFRT-LANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+      +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDAQDKVGDSALLWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|326204287|ref|ZP_08194146.1| alanine racemase [Clostridium papyrosolvens DSM 2782]
 gi|325985562|gb|EGD46399.1| alanine racemase [Clostridium papyrosolvens DSM 2782]
          Length = 389

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 27/379 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I L  + +N   +  ++G NA    VVK +AYG G  ++A  L   G   F V+
Sbjct: 6   NRAWAEISLDNIAHNIREIRRITGKNAEIMGVVKADAYGHGVMEVAKTLLENGASRFAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++E ++LR    +  I +L    P +   I + ++   + S       S      G   
Sbjct: 66  MLDEAIQLRREGIEVPILILGYTDPRRANEIIENDVTQSVFSHDLAQALSDEAVRQGKKV 125

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG +R+G      A+             +  + +H A AD+ +    + Q ER
Sbjct: 126 KIHIKIDTGMSRIGFLPGYSAVKNVVEISRLPNIIIEGLFTHFATADEKNREYTNTQFER 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQ 233
           F ++    + I   +      +S+ I+  P  H  + RPGI LYG     + +     ++
Sbjct: 186 FMSICCELQRIGIHIPVKHCANSAAIIEYPEMHLDMVRPGIILYGMYPSDDVNKAKIDLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T +A +I++++      +SYG      R S IA   IGYADG+   LS         
Sbjct: 246 PAMTLKANVIMVKEVEKNTSISYGRIFTTGRTSKIATIPIGYADGFNRMLSN-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDDVAL 348
               GK  I G   P++G++ MD  M DITD   ++EVGD + + G      I  +DVA 
Sbjct: 298 ---KGKVLINGEFAPVVGRVCMDQCMVDITDIGSNVEVGDEVVLIGAQGQNNITAEDVAQ 354

Query: 349 ASGTTNYDLLVRIGTRYAK 367
             G  NY+L+  +G R  +
Sbjct: 355 TIGMINYELVCIVGKRIPR 373


>gi|317050883|ref|YP_004111999.1| alanine racemase [Desulfurispirillum indicum S5]
 gi|316945967|gb|ADU65443.1| alanine racemase [Desulfurispirillum indicum S5]
          Length = 358

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 169/366 (46%), Gaps = 21/366 (5%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +I L  +++N+  +   +G+ R   VVK +AYG G   +A  L + G   F V  V EG+
Sbjct: 7   EIHLPHIRHNFRLLQQRAGHTRIVGVVKADAYGHGDVPVALCLQSEGCTHFAVARVHEGI 66

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           KLR       I ++ G  P +   + + NL  V+          +++  G+S P  ++++
Sbjct: 67  KLRKAGIHGDILIMSGSFPNEFAALREFNLTTVVYCE---ENIEEMVREGISVPVHIKIN 123

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           TG NRLG          + +  +    +  I++H+ACAD+P S     Q   F   +  Y
Sbjct: 124 TGMNRLGFRPDRLPW-VYRTLTEAGFAVRGIMTHMACADEPGSPTIGAQENLFYRSLEPY 182

Query: 190 KGIEA-SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
                    S+S  +   +    L RPGI LYGG    +K+  ++  +T + +I+ +++ 
Sbjct: 183 FQEGMLGHLSNSAGIFTLDNLGSLARPGIMLYGGNPFADKTVDLRPAMTFKTKILQVKRV 242

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             GE +SYG      R+ L+A  A GYADGY   LS              +  + G   P
Sbjct: 243 FPGEGISYGHSFVADREMLVATVAAGYADGYSRLLSN-----------KARVLVNGQYAP 291

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTR 364
            +G++ MDM+M D+T       GD + +FG      I   ++A   GT +Y++   I  R
Sbjct: 292 QVGRVCMDMSMVDVTHIQPAR-GDEVVLFGEQRGQCIYASELAELMGTIDYEVFCGISPR 350

Query: 365 YAKFYT 370
             + YT
Sbjct: 351 VKRIYT 356


>gi|157963394|ref|YP_001503428.1| alanine racemase [Shewanella pealeana ATCC 700345]
 gi|254802379|sp|A8H8K6|ALR_SHEPA RecName: Full=Alanine racemase
 gi|157848394|gb|ABV88893.1| alanine racemase [Shewanella pealeana ATCC 700345]
          Length = 358

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   ALKNN   ++ L+ +++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISRHALKNNLARLHELAPSSKVMAVVKANGYGHGLLNVAQCLDN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE + LR    +A++ +L G         + + ++  V+    Q+    +         
Sbjct: 61  LEEALALRAGGVKAKLLLLEGFFRATDLVTLVEHDIETVVHHESQIEMLEQ-AELNKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERF 182
             ++VD+G +RLG    E               +   +++H ACAD+P +   + Q+  F
Sbjct: 120 VWMKVDSGMHRLGFVPDEFHQIYQRLLACDNIAKPINLMTHFACADEPDNDCTAKQIAVF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L     G + +LA+S+G L          RPGI+LYG +     +   H +   +   
Sbjct: 180 EELTKDLLG-DRTLANSAGALFWQQSQASWIRPGIALYGVSPVVGDLGTKHGLIPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I IR   AG+ V YG      +D+ + V AIGY DGYP               LG  
Sbjct: 239 SQLIAIRDHKAGQPVGYGSHWVAEKDTKLGVVAIGYGDGYPRNA-----------PLGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G + PI+G+++MDM   D+       VGD   ++G D+ +++VA   GT  Y+L+ 
Sbjct: 288 VLINGRLAPIVGRVSMDMLTVDLGAGAKDNVGDKAVLWGKDLPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|94500388|ref|ZP_01306920.1| alanine racemase [Oceanobacter sp. RED65]
 gi|94427423|gb|EAT12401.1| alanine racemase [Oceanobacter sp. RED65]
          Length = 365

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 173/374 (46%), Gaps = 21/374 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  IDL AL++N+   ++L+  +++ AVVK NAYG G    A AL    V  F V 
Sbjct: 2   SRPTQAIIDLEALRSNYRLADSLAPQSQSIAVVKANAYGHGAVPCAKALEPI-VPAFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--- 119
           S++E ++LR    +  I +L G    G+ +I  +     +I +   L F  +        
Sbjct: 61  SIDEAIELREGGIRKPILLLEGPFSFGEVQIASEHEFWLMIENHNHLAFIEQCEHKKLIC 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L++D+G +RLG    E         +   +    ++ +H A AD         Q
Sbjct: 121 KPLKCWLKMDSGMHRLGFMPFEIAAIYQKLKSTSIVHDEIVVATHFATADVEGDAFVKEQ 180

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTV 235
           ++ F   IS    +  SL +S+G++  P  H    RPG  LYG +      H     Q+V
Sbjct: 181 IDCFNEAISGLGCL-TSLCNSAGVMAWPQAHGSWNRPGFMLYGASPFELPQHNDKTLQSV 239

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++++I +R    GE V YG      RDS IA   +GY DGYP               
Sbjct: 240 MTLQSKVISVRNVKKGEAVGYGKTWIAQRDSRIATVTVGYGDGYPRHAKN---------- 289

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    +      + G+++MDM   D+TD  S+ +GD +  +G D+ +++VA  SGT  Y
Sbjct: 290 -GTPILVNNQRCKLAGRVSMDMITVDVTDVGSVNIGDDVICWGKDLPINEVAHYSGTIGY 348

Query: 356 DLLVRIGTRYAKFY 369
           +L+ R+  R ++ Y
Sbjct: 349 ELMTRMPLRPSRIY 362


>gi|153956178|ref|YP_001396943.1| alanine racemase [Clostridium kluyveri DSM 555]
 gi|189027531|sp|A5N376|ALR_CLOK5 RecName: Full=Alanine racemase
 gi|146349036|gb|EDK35572.1| Alr [Clostridium kluyveri DSM 555]
          Length = 391

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I+L  L  N   + +  GN     V+K +AYG G  +IA  L   GV    V  
Sbjct: 6   RPVWEEINLDNLVYNIGQIKSKIGNKELIGVIKADAYGHGAVEIAKVLLENGVSRLAVAI 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHP 123
           ++E ++LR    +  I VL  I       I + ++ P++ S    +  SKL         
Sbjct: 66  LDEAIELRKNKIKVPIMVLGIIPHAFLDEIMNYDIEPIVPSYSYASKLSKLAESKDKKIK 125

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G S+   +++           ++  + SH + AD+     +  Q +++
Sbjct: 126 VHIALDTGMGRIGFSIDPNSVEEIGKISKLPNIEIQSLFSHFSTADETDKAYSCEQFKKY 185

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QT 234
           + L              ++++S+ I+  P+ +  L RPGI +YG              + 
Sbjct: 186 KLLYEELVKKNVKINMRTISNSAAIMELPDTYCDLVRPGIIMYGYYPSTEVDKNNLSIKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++T +A ++ ++   +G  + YG + K  R S+IA   +GYADGY   L G         
Sbjct: 246 IMTLKANVVYVKVLESGSYIGYGRKFKCNRKSVIATLPLGYADGYTRRLFG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
               K  I G   P++G I MD  M D+TD   + +GD + + G         DD+A  +
Sbjct: 297 --KAKVIINGKFAPVVGNICMDQCMVDVTDVGEVNIGDEVVLIGEKDGLKFNADDIAEIT 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y++L  IG R  K Y
Sbjct: 355 GTISYEVLCMIGRRVPKLY 373


>gi|256821804|ref|YP_003145767.1| alanine racemase [Kangiella koreensis DSM 16069]
 gi|256795343|gb|ACV25999.1| alanine racemase [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 178/370 (48%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N +++  ++  +R  AVVK +AYG G  ++A AL + G   F V +
Sbjct: 2   RSTKAIIDLAALRHNLNTIKTIANGSRVMAVVKADAYGHGLVQVAKALTD-GADMFAVAT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           V+E + LR    +  I +L GI      +++ + +L  V+   PQ+       +      
Sbjct: 61  VQEALSLRKAEIKTPILLLEGIFNAKDLELVVEHDLQVVLHHWPQIEALQNF-NTDKKIQ 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++D+G NRLG +LQ+             L     ++SH A ADDP    +S QLE F
Sbjct: 120 VWVKLDSGMNRLGFALQDLALIESTLSKIPSLANPIRLMSHFASADDPEDEFSSTQLEAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
                +    E S+A+S+GIL     H+   RPG+ LYG +         + ++ V++ E
Sbjct: 180 DQATKNIT-TEKSMANSAGILTQKGAHYDWVRPGLLLYGCSPLVGSEASDYDLKPVMSLE 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++++ I+    GE   YG      RD+ + + AIGY DGYP                   
Sbjct: 239 SQVLAIKPIKKGESTGYGRHWFADRDTNLGLVAIGYGDGYPRHARNS-----------TP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G +VP++G+++MDM   D+       VGD + ++G ++  + VA  + T  Y L  
Sbjct: 288 VWLNGRIVPLVGRVSMDMMAVDLGPDCQDAVGDRVVLWGKELPAESVAPFADTIPYTLFC 347

Query: 360 RIGTRYAKFY 369
            +  R  +FY
Sbjct: 348 GVTRRV-RFY 356


>gi|126175832|ref|YP_001051981.1| alanine racemase [Shewanella baltica OS155]
 gi|254802375|sp|A3D8P9|ALR_SHEB5 RecName: Full=Alanine racemase
 gi|125999037|gb|ABN63112.1| alanine racemase [Shewanella baltica OS155]
          Length = 358

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 18/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N F R +I  +AL+ N  ++   +  +R  AVVK N YG G   +A  L +     F + 
Sbjct: 2   NPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVANCLVS--ADGFGLA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR     AR+ +L G     +  +   + I  +          +         
Sbjct: 60  RLDEALELRAGGVTARLLLLEGFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG + ++             + +   +++H ACAD+P +   SVQ+  F
Sbjct: 120 VWLKVDSGMHRLGFTPEQFSTVYDRLMACPNVAKPIHLMTHFACADEPDNTYTSVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
            +L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NSLTAGLPGFRT-LANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+      +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDAQDKVGDSALLWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|217971929|ref|YP_002356680.1| alanine racemase [Shewanella baltica OS223]
 gi|254802374|sp|B8E9P2|ALR_SHEB2 RecName: Full=Alanine racemase
 gi|217497064|gb|ACK45257.1| alanine racemase [Shewanella baltica OS223]
          Length = 358

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 18/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N F R +I  +AL+ N  ++   +  +R  AVVK N YG G   +A  L +     F + 
Sbjct: 2   NPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVAHCLVS--ADGFGLA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR     AR+ +L G     +  +   + I  +          +         
Sbjct: 60  RLDEALELRAGGVTARLLLLEGFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG + ++             + +   +++H ACAD+P +   SVQ+  F
Sbjct: 120 VWLKVDSGMHRLGFTPEQFSTVYDRLMACPNVAKPIHLMTHFACADEPDNTYTSVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
            +L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NSLTAGLPGFRT-LANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+      +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDAQDKVGDSALLWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|152999256|ref|YP_001364937.1| alanine racemase [Shewanella baltica OS185]
 gi|254802376|sp|A6WJ85|ALR_SHEB8 RecName: Full=Alanine racemase
 gi|151363874|gb|ABS06874.1| alanine racemase [Shewanella baltica OS185]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 18/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N F R +I  +AL+ N  ++   +  +R  AVVK N YG G   +A  L +     F + 
Sbjct: 2   NPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVANCLVS--ADGFGLA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR     AR+ +L G     +  +   + I  +          +         
Sbjct: 60  RLDEALELRAGGVTARLLLLEGFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG + ++             + +   +++H ACAD+P +   SVQ+  F
Sbjct: 120 VWLKVDSGMHRLGFTPEQFSTVYARLMACPNVAKPIHLMTHFACADEPDNSYTSVQMAAF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
            +L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NSLTAGLPGFRT-LANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   A + V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+      +VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGQDAQDKVGDSALLWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|312963835|ref|ZP_07778306.1| alanine racemase [Pseudomonas fluorescens WH6]
 gi|311281870|gb|EFQ60480.1| alanine racemase [Pseudomonas fluorescens WH6]
          Length = 357

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 171/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+K +AYG G  ++A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARDVTG-AKALAVIKADAYGHGAVRVAQALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + +   V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIIEHDFWCVVHSLWQLEAIEQAALS-KPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  +              +++SH A AD+     ++ Q+  F 
Sbjct: 119 IWLKLDSGMHRVGLHPKDYQEAYQRLLASGKVAKIVLMSHFARADELDCTSSNEQVAVFD 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEA 240
                    E SL +S  +L  P+      RPGI LYG T           +Q V+T E+
Sbjct: 179 A-ARQGLAAEVSLRNSPAVLGWPSVSSDWVRPGIMLYGATPFGEDQALAARLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    +   I V A+GYADGYP                G   
Sbjct: 238 KVICVRELPAGEPVGYGARFVTPKPMRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG+++MDM   D+TD     +G  ++++G +I   DVA+A+ T  Y +   
Sbjct: 287 LVAGQRSQLLGRVSMDMLCVDLTDVPQAGLGSTVELWGKNILASDVAVAADTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 347 L-RRVPRLY 354


>gi|89092607|ref|ZP_01165560.1| alanine racemase [Oceanospirillum sp. MED92]
 gi|89083119|gb|EAR62338.1| alanine racemase [Oceanospirillum sp. MED92]
          Length = 358

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I L A+++N+    +++ +    A++K NAYG G  ++A AL +     F V  
Sbjct: 3   RAATATISLEAIRHNYSLAKSVAPDQGALAIIKANAYGHGAVEVAKALSDI-ADGFGVAC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +  I +L G     E        +                        
Sbjct: 62  IEEAIELREAGIKLPILLLEGFFSADELDYISRENLWCAVHSLAQIDIIAAAKIDTPIKI 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG++  +  +      +    +  ++++H + AD+P   V + Q+  F  
Sbjct: 122 WLKMDSGMHRLGVAPDDYQEAYQRLNDLTQVKEVVLMTHFSSADEPDLAVTAEQIALFDK 181

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
           +    +  + SLA+S+G +  P       RPGI LYG T        +  ++  +T  + 
Sbjct: 182 VTQGIEA-DVSLANSAGTMAYPEARRSWQRPGIMLYGATPFAMPQEVADKLKPAMTLSSE 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V Y       + + +   A+GYADGYP                G    
Sbjct: 241 VIAVRDLEPGEAVGYSCTWVCDKPTRVGTVAMGYADGYPR-----------YAKSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    I+G+++MDM   D+TD    EVG Y++ +G ++   ++A    T  Y L   I
Sbjct: 290 VNGQKSQIIGRVSMDMLAVDLTDIPDAEVGSYVEFWGDNLAASEIATYCDTIPYTLFTGI 349

Query: 362 GTRYAKFY 369
             R  K Y
Sbjct: 350 TRRVHKKY 357


>gi|315634389|ref|ZP_07889676.1| alanine racemase [Aggregatibacter segnis ATCC 33393]
 gi|315476979|gb|EFU67724.1| alanine racemase [Aggregatibacter segnis ATCC 33393]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 171/368 (46%), Gaps = 17/368 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH  +    KI   ALK+N  ++   + N++  AVVK NAYG G   ++ A   + V  F
Sbjct: 1   MHM-KPATAKISSVALKHNIQTIKQKAPNSKIIAVVKANAYGHGVVFVSSA-VESLVDCF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE +KLR       I +L G    ++  I   N I  +    +     +      
Sbjct: 59  GVARLEEALKLRSNGITKPILLLEGFFSSKDLPILAVNNIQTVVHSQEQLEALEEAQTPN 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQL 179
                L++DTG +RLG+ L E   F     +   +      +SH + AD+        QL
Sbjct: 119 PVKVWLKIDTGMHRLGVHLDEVDSFYQKLKSLPCVDPNIGFVSHFSRADELECGYTEKQL 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVT 237
            RF        G E S+++S GIL   + H    RPGI +YG +      K + +  V+ 
Sbjct: 179 SRFLQATEGKSG-ERSISASGGILFWQDAHLDWIRPGIIMYGISPNNTAGKEYGLTPVMN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I +R+   GE V YGG     +D+ I V AIGY DGYP             V  G
Sbjct: 238 LTSSLIAVREHKKGEPVGYGGVWTSEKDTKIGVVAIGYGDGYPR-----------DVPQG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              ++ G  VPI+GK++MDM   D+      +VGD + ++G ++ ++++A  +G  +Y+L
Sbjct: 287 TPVYLNGRRVPIVGKVSMDMLTVDLGADSQDKVGDEVILWGKELPIEEIAEITGVISYEL 346

Query: 358 LVRIGTRY 365
           + ++  R 
Sbjct: 347 ITKLTPRV 354


>gi|251792441|ref|YP_003007167.1| alanine racemase [Aggregatibacter aphrophilus NJ8700]
 gi|247533834|gb|ACS97080.1| alanine racemase [Aggregatibacter aphrophilus NJ8700]
          Length = 360

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 171/368 (46%), Gaps = 17/368 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH  +    KI   ALK+N  ++   + N++  AVVK NAYG G   ++ A   + V  F
Sbjct: 1   MHM-KPATAKISSVALKHNIQTIKQKAPNSKIIAVVKANAYGHGVVFLSSA-VESLVDCF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE +KLR       I +L G    ++  I   N I  +    +     +      
Sbjct: 59  GVARLEEALKLRSNGITKPILLLEGFFSSKDLPILAVNNIQTVVHSKEQLEALERAKTPN 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQL 179
                L++DTG +RLG+ L E   F     +   +      +SH + AD+        QL
Sbjct: 119 PVKVWLKIDTGMHRLGVHLDEVETFYQKLKSLTCVDPNIGFVSHFSRADELECGYTEKQL 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVT 237
            RF        G E S+++S GIL  P  H    RPGI +YG +      K + +  V+ 
Sbjct: 179 ARFLQATEGKSG-ERSISASGGILFWPEAHLDWIRPGIIMYGISPNNTAGKEYGLTPVMN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I +R+   GE V YGG     +D+ I V AIGY DGYP             V  G
Sbjct: 238 LTSSLIAVREHKKGEPVGYGGVWVSDKDTKIGVVAIGYGDGYPR-----------DVPEG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              ++ G  VPI+GK++MDM   D+      +VGD + ++G ++ ++++A  +G  +Y+L
Sbjct: 287 TPVYLNGRRVPIVGKVSMDMLTVDLGADSQDKVGDEVILWGKELPIEEIASIAGIISYEL 346

Query: 358 LVRIGTRY 365
           + ++  R 
Sbjct: 347 ITKLTPRV 354


>gi|258625986|ref|ZP_05720851.1| alanine racemase [Vibrio mimicus VM603]
 gi|258581734|gb|EEW06618.1| alanine racemase [Vibrio mimicus VM603]
          Length = 375

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 113/375 (30%), Positives = 179/375 (47%), Gaps = 20/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   + +++  A VK N YG G   IA      G   F
Sbjct: 12  MNYMKAATAYINLDALQHNLQRVKQQAPHSKIMAAVKANGYGHGLRHIARYAL--GADAF 69

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +     
Sbjct: 70  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQ-AQLE 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF +       + +    +SH  CAD+      + Q
Sbjct: 129 TPVMVWLKVDSGMHRLGVRPEQYRDFVNRLHQCANVAKPLRYMSHFGCADELDKSTTAEQ 188

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +    KS      Q V
Sbjct: 189 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFAEKSAEELGYQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 248 MTLKSHLIAVREVKAGESVGYGGIWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G  VPI G+++MDM   D+    +  VGD   ++G ++ +++VA   GT  Y
Sbjct: 298 -GTPVVVSGRRVPIAGRVSMDMLTVDLGPEATDCVGDEAMLWGRELPVEEVAAHIGTLGY 356

Query: 356 DLLVRIGTRYAKFYT 370
           +L+ ++ +R    Y+
Sbjct: 357 ELVTKLTSRVEMSYS 371


>gi|117919166|ref|YP_868358.1| alanine racemase [Shewanella sp. ANA-3]
 gi|254802382|sp|A0KT33|ALR_SHESA RecName: Full=Alanine racemase
 gi|117611498|gb|ABK46952.1| alanine racemase [Shewanella sp. ANA-3]
          Length = 358

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   +  ++  AVVK N YG G   +A  L+      F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQASRSQVMAVVKANGYGHGLLNVANCLHT--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +AR+ +L G        ++   ++  V+    Q+    +  +      
Sbjct: 61  LEEALELRAGGVKARLLLLEGFFRSTDLPLLVAHDIDTVVHHESQIEMLEQ-ATLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++             + +   +++H ACAD+P +H   VQ++ F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFTQVYARLMACDNVAKPIHLMTHFACADEPENHYTQVQMQTF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NQLTADLPGFRT-LANSAGALYWPKSQGDWIRPGIALYGVSPVTGDCGANHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R   AG+ V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVRDHKAGQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+    +  VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGADATDLVGDEALLWGAALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|242280765|ref|YP_002992894.1| alanine racemase [Desulfovibrio salexigens DSM 2638]
 gi|242123659|gb|ACS81355.1| alanine racemase [Desulfovibrio salexigens DSM 2638]
          Length = 382

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 29/382 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            +  ++DL+A+ +N+  +  L    ++  AVVK +AYG G  K+A  L  AG   F V  
Sbjct: 9   PIWAEVDLSAISHNFSEVQRLVNKQSKIMAVVKADAYGHGLTKVADCLNKAGADYFAVAR 68

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV-ISSVPQLTFYSKLMSCGVSHP 123
           ++E V LR +  +  I +L    P     +    +I    SS        KL     +  
Sbjct: 69  LDEAVALRNHGIEKPILILGYTPPEAATELLKHKVIQTVFSSEYAKDLNEKLNQTNKTLK 128

Query: 124 YALQVDTGFNRLGLSLQ----EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
             +++DTG  RLGL  +      L+           +   + +H A +D+        QL
Sbjct: 129 VHIKIDTGMGRLGLVDEFNDGAVLESISTINRLPNLETEGVYTHFAASDEADKTSALEQL 188

Query: 180 ERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           ++F+ +++  +    S+      +S+ I+  P  +F + RPGI LYG         ++  
Sbjct: 189 KQFKNILAGIERRGISIPLKHAANSAAIIDLPESYFDMVRPGIMLYGLYPSNGVHQQNAE 248

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +  +ARI   ++  AG  +SYG        + +A   +GYADGY   LS       
Sbjct: 249 LRPAMQIKARIAQTKEVPAGFRISYGHTYTTPNATKLATIPLGYADGYRRQLS------- 301

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                 GK  + G    I+G++ MD ++ D+    ++E GD + I G     +I  + +A
Sbjct: 302 ----SAGKVLVHGQHASIVGRVCMDQSVIDVGKIENVEAGDEVVIIGRQEQAEISAERMA 357

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY+++  +  R  + +
Sbjct: 358 CELGTINYEIVSTLMARVPRIF 379


>gi|212710295|ref|ZP_03318423.1| hypothetical protein PROVALCAL_01354 [Providencia alcalifaciens DSM
           30120]
 gi|212687102|gb|EEB46630.1| hypothetical protein PROVALCAL_01354 [Providencia alcalifaciens DSM
           30120]
          Length = 360

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 178/364 (48%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+ N+R  AVVK NAYG G   +        V  F V  + E + 
Sbjct: 8   INRRALRHNLQRVRELAPNSRLIAVVKANAYGHGLIGVGTE-IQGSVDGFGVARLNEALL 66

Query: 71  LRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G       +++ + ++  VI  V QL                +++D
Sbjct: 67  LRHQGVTKPIVLLEGFFEQSDLQLMVEYHIDTVIHCVEQLEMLES-AQLAKKIKVWMKLD 125

Query: 130 TGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           TG +RLG+  Q A  F         +     I+SH   AD P       Q+E F+  +S 
Sbjct: 126 TGMHRLGILPQHAESFYQRLQSCSNVDLPINIVSHFCQADAPELPTTQKQIECFQQFVSD 185

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILI 245
             G E S+A+S+GILL P  H+   RPGI +YG + +  KS     +  V+T ++ +I +
Sbjct: 186 KPG-EKSIAASAGILLWPEAHYDWVRPGIMMYGASPQEGKSAASFGLLPVMTLKSTLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AG+ V YG      R++ + V AIGY DGYP             V  G    + G 
Sbjct: 245 REHSAGQCVGYGETWCSERNTRLGVVAIGYGDGYPRN-----------VPSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G+I+MDMT+ D+    + +VGD + ++G  + ++++A  +G  NY+LL ++ +R 
Sbjct: 294 KVPIIGRISMDMTVVDLGPDATDKVGDDVILWGNALPVEEIATQTGIINYELLTKLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMEY 357


>gi|218437857|ref|YP_002376186.1| alanine racemase [Cyanothece sp. PCC 7424]
 gi|218170585|gb|ACK69318.1| alanine racemase [Cyanothece sp. PCC 7424]
          Length = 403

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 111/379 (29%), Positives = 175/379 (46%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++ID  A+ +N H++   LS +    AVVK +AYG G  K+A     AG     +
Sbjct: 25  RQRAWIEIDHHAIAHNVHAIKQILSPSTELMAVVKADAYGHGALKVAQTALQAGASWLAI 84

Query: 63  TSVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
            ++ EG++LR     A I +L     P +   I    L P + +  Q   +S+ +S  G 
Sbjct: 85  ATLGEGIELREAGIAAPILILGAINTPEEIATIAHWKLQPTLCNPQQALIFSETLSKIGQ 144

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  L++DTG +RLG    EA DF          ++  + SHLA ADDP   +  +Q +
Sbjct: 145 TLPVHLKIDTGMSRLGTIWHEAADFVQLVHQLPNLKMKSVYSHLATADDPDPTIMRLQHQ 204

Query: 181 RFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQ 233
           RF   IS  K           A+S+  L   + H+ L R G+ LYG     +   +  ++
Sbjct: 205 RFEKAISEIKAQGITPPRLHFANSAATLSDRSVHYDLVRVGLGLYGLYPAPHLRSTVDLK 264

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +ARI  ++    G  VSYG Q    R+  IAV  IGYADG    LS         
Sbjct: 265 PVLQVKARITQVKTIPPGTGVSYGYQFISDRELRIAVVGIGYADGVSRNLSNRL------ 318

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                +  I+G  V  +G ITMD  M D+++   ++ G+ + + G     +I  D+ A  
Sbjct: 319 -----EVLIRGKRVRQIGAITMDQLMLDVSNIPHLQAGEVVTLIGKDQDEEITADEWATQ 373

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 374 LGTISWEILCGFKHRLPRV 392


>gi|325964088|ref|YP_004241994.1| alanine racemase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470175|gb|ADX73860.1| alanine racemase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 405

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 152/376 (40%), Gaps = 29/376 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+++N   + A +  A+  AVVK +AYG G   +A A   AG     V  + E 
Sbjct: 24  AVIDLDAIRHNVRRLAAAASPAKVMAVVKADAYGHGAVPVARAALEAGASWLGVAHISEA 83

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR     A +                  +    S        +            L+V
Sbjct: 84  LALRAAGIDAPLLAWLHTPDSNFGAAVAAGVDIGCSGWELDRIVAAAREQERPARIHLKV 143

Query: 129 DTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G +L              ++ L ++  I SHLA AD+P       QL  FR +
Sbjct: 144 DTGLGRNGATLDTWDHIVGEAMEYQDQGLLRVVGIFSHLAVADEPERPETDQQLATFREV 203

Query: 186 I-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVT 237
           +     +        LA++   L  P+ HF L R G+ +YG +    +S     ++  +T
Sbjct: 204 LAVAEDAGVDPEVRHLANTPATLSRPDTHFDLVRVGLGIYGLSPFAGQSSAELGLRPAMT 263

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               +   ++   G+ VSYG +   T  S + +  +GYADG P             +  G
Sbjct: 264 LRTLVSQCKEVPDGQGVSYGLRYHTTGASTLGLIPMGYADGVPR------------IATG 311

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIE--VGDYIQIFGP----DIKLDDVALASG 351
           G   + G   P++G+I MD  + D   ++     +G   ++FG         DD A A+G
Sbjct: 312 GPVRVAGRTYPVVGRIAMDQMVIDFGSTVQAGSLLGAEAELFGDGSDGGPTADDWARAAG 371

Query: 352 TTNYDLLVRIGTRYAK 367
           T NY+++ RI  R  +
Sbjct: 372 TINYEIVTRISPRVPR 387


>gi|113971579|ref|YP_735372.1| alanine racemase [Shewanella sp. MR-4]
 gi|123324703|sp|Q0HF52|ALR_SHESM RecName: Full=Alanine racemase
 gi|113886263|gb|ABI40315.1| alanine racemase [Shewanella sp. MR-4]
          Length = 358

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I  +AL+NN   +   +  ++  AVVK N YG G   +A  L+      F +  
Sbjct: 3   PFPRAEISSSALQNNLAVLRQQASRSQVMAVVKANGYGHGLLNVANCLHT--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +AR+ +L G        ++   ++  V+    Q+    +  +      
Sbjct: 61  LEEALELRAGGVKARLLLLEGFFRSTDLPLLVAHDIDTVVHHESQIEMLEQ-ATLSKPVT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG++ ++        +    + +   +++H ACAD+P +H   VQ++ F
Sbjct: 120 VWLKVDSGMHRLGVTPEQFAQVYARLTACDNVAKPIHLMTHFACADEPENHYTQVQMQTF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +   G    LA+S+G L  P       RPGI+LYG +        +H +   +   
Sbjct: 180 NQLTADLPGFRT-LANSAGALYWPKSQGDWIRPGIALYGVSPVTGDCGANHGLIPAMNLV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R   AG+ V YG      +D+ + V AIGY DGYP                G  
Sbjct: 239 SRLIAVRDHKAGQPVGYGCYWTAKQDTRLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+    +  VGD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGADATDLVGDEALLWGAALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|163803116|ref|ZP_02197000.1| alanine racemase [Vibrio sp. AND4]
 gi|159173108|gb|EDP57940.1| alanine racemase [Vibrio sp. AND4]
          Length = 358

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 171/364 (46%), Gaps = 20/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL+AL++N   +   + N++   VVK N YG G   +A    +     F V  +EE ++
Sbjct: 8   IDLSALQHNLQRVKQQAPNSKVMVVVKANGYGHGLRHVAKHATH--ADAFGVARIEEALQ 65

Query: 71  LRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       I +L G +  G   ++   N+  V+    QL    +           L++D
Sbjct: 66  LRACGVVKPILLLEGFYSLGDLPVLVTNNIQTVVHCEEQLAALEQ-ADLETPVVVWLKID 124

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFRTLISH 188
           +G +RLG+  ++  +F                +SH  CAD+  + + + Q++ F +L + 
Sbjct: 125 SGMHRLGVRPEQYDEFISRLKECPNVAKPLRYMSHFGCADELDNKITTEQIDLFMSLTAG 184

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILI 245
            +G E SLA+S+G+L  P       RPGI +YG +    K       + V+T ++ +I +
Sbjct: 185 CQG-ERSLAASAGLLAWPQSQLDWVRPGIIMYGVSPFGEKTAQDMGYKPVMTLKSHLIAV 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G  V YGG     RD+ + V A+GY DGYP T              G    + G 
Sbjct: 244 RDVKKGASVGYGGIWTSERDTKVGVIAVGYGDGYPRTAPN-----------GTPVLVNGR 292

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI G+++MDM   D+    + +V D   ++G D+ +++VA   GT  Y+L+ ++ +R 
Sbjct: 293 KVPIAGRVSMDMLTVDLGPDATDKVSDEAILWGKDLPVEEVASHIGTIGYELVTKLTSRV 352

Query: 366 AKFY 369
              Y
Sbjct: 353 EMEY 356


>gi|300869471|ref|ZP_07114054.1| Alanine racemase [Oscillatoria sp. PCC 6506]
 gi|300332528|emb|CBN59252.1| Alanine racemase [Oscillatoria sp. PCC 6506]
          Length = 408

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 112/385 (29%), Positives = 175/385 (45%), Gaps = 32/385 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++IDL AL +N   +  +LS       VVK +AYG G   +A     AG     V 
Sbjct: 30  QRAWVEIDLAALAHNVRQLKLSLSPKTALMTVVKADAYGHGAVTVAQTALEAGASWLGVA 89

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
           ++ EG++LR     A I +L   H P Q + I    L P I +  Q   +S+++     S
Sbjct: 90  TIPEGIELRDRGINAPILILGATHTPEQVEAIAHWQLQPTICTPKQALVFSEVLGTLNKS 149

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++DTG +RLG   Q+A +F          +L+ I SHLA AD P   V   Q +R
Sbjct: 150 LSVHVKLDTGMSRLGSPWQQAAEFVQLVARSPNLELASIYSHLATADSPDFTVMKQQQQR 209

Query: 182 FRTLISHYK------------GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
           F   I++ +                 LA+S+  L   + H+ + R G++ YG     +  
Sbjct: 210 FEGAIANCEIQNSELFLNPKSSPRLHLANSAAALADKSLHYDMVRVGLATYGLYPAPHLQ 269

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++ V+  +A++  ++   AG  VSYG +    R+  +AV  IGYADG P  LS   
Sbjct: 270 SVIDLKPVMQVKAKVTQVKTIAAGTGVSYGYKFIADREMRLAVIGIGYADGIPRNLSN-- 327

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  ++G  V  +G ITMD  M D+T    +EVG+ + + G D    I  
Sbjct: 328 ---------KMKVLVRGQWVSQVGAITMDQIMLDVTSIPDLEVGEVVTLLGKDGENKISA 378

Query: 344 DDVALASGTTNYDLLVRIGTRYAKF 368
           DD A   GT ++++L     R  + 
Sbjct: 379 DDWAAELGTISWEILCSFKHRLPRI 403


>gi|157373902|ref|YP_001472502.1| alanine racemase [Shewanella sediminis HAW-EB3]
 gi|254802383|sp|A8FRA1|ALR_SHESH RecName: Full=Alanine racemase
 gi|157316276|gb|ABV35374.1| Alanine racemase [Shewanella sediminis HAW-EB3]
          Length = 358

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F R +I   AL+NN   +  ++  ++  AVVK N YG G   +A  L N     F +  
Sbjct: 3   PFPRAEISSKALQNNLARLREIAPGSKVMAVVKANGYGHGLLNVAHCLDN--ADGFGLAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            EE + LR    ++++ +L G         + + ++  V+ +  QL      +       
Sbjct: 61  PEEALALREGGVKSKLILLEGFFSQVDLTTLVEHDIDTVVHNEVQLELLESSILA-KPAT 119

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++D+G +RLG + ++ A  +       ++ +   ++SH ACAD+P +    VQ+  F
Sbjct: 120 VWLKIDSGMHRLGFTPEQFAAVYARLEACPQVAKPINLMSHFACADEPDNPSTKVQINLF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             LI    G + SLA+S+G L  P       RPGI+LYG +     +  +H +   +   
Sbjct: 180 NDLIKDLPG-QRSLANSAGTLYWPESQADWIRPGIALYGVSPVIGDLGGNHGLMPAMELV 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++I +R   AGE V YG       D+ + V AIGY DGYP                G  
Sbjct: 239 SQLIAVRDHKAGEPVGYGSSWYAKEDTKLGVVAIGYGDGYPRNA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+  + +  +GD   ++G  + +++VA   GT  Y+L+ 
Sbjct: 288 VWVNGRRVPIVGRVSMDMLTVDLGINATDLIGDDAILWGKALPVEEVAEHIGTIAYELVT 347

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 348 KLTPRV 353


>gi|91200113|emb|CAJ73156.1| similar to alanine racemase [Candidatus Kuenenia stuttgartiensis]
          Length = 374

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 24/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     +IDL+AL++N   +    G N +   VVK NAYG G  +I   L   GV+   +
Sbjct: 2   HRPTWAEIDLSALRHNLQEIRRRIGANIKILGVVKANAYGHGDYEIGALLVKNGVEMLGI 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVS 121
             +EEGV LR     + + +  G    Q   I   NL P +  +      +      G +
Sbjct: 62  AILEEGVHLREKGITSPLLLFGGFFEEQIDAIIHYNLTPTVYDLTLAEKLAHHAHSAGKT 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               + +DTG    G+    A +   +        +  I +H + ADD  S     Q+  
Sbjct: 122 VNVHVYIDTGMGGTGVRHDVAFECIKHLTGMNGLVIEGIYTHCSSADDNDSTNTERQIRN 181

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPMQT 234
           F+ +I+             +A++  IL   + +F + RPG+SLYG   +DK +++  ++ 
Sbjct: 182 FKDIIAKLDTAGIIIPLKHMANTGSILRYNDSYFTMARPGLSLYGLHVSDKESRNLSVKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++ + RII I+    GE + YGG  K+TR + +A   +GY DGY   LS          
Sbjct: 242 VMSLKTRIIHIKTMEPGETLGYGGSYKITRTTRVATLPLGYDDGYNRLLSNQ-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G+  ++G  VP++G+I MD    D+T   ++ VGD + I+G      I ++ VA   
Sbjct: 294 ---GRVIVRGNKVPVIGRICMDQCFIDVTTIKNVSVGDEVVIYGRQGKETISIESVAEQR 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   +  R  + Y
Sbjct: 351 KTIPYEITCNVSYRVPRIY 369


>gi|90423792|ref|YP_532162.1| alanine racemase [Rhodopseudomonas palustris BisB18]
 gi|90105806|gb|ABD87843.1| alanine racemase [Rhodopseudomonas palustris BisB18]
          Length = 407

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 187/364 (51%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW  +   +  +  A VVK +AYG G   +A AL  AG + FFV +++E 
Sbjct: 33  LSIDLDAIVANWRKLEKTAVPSECAGVVKADAYGCGAGPVARALLAAGCKTFFVATLDEA 92

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQ 127
            +LR   P A ++VL G  P       + +  PVI S+ +L  + S           A+ 
Sbjct: 93  RELRAAAPAAVVYVLDGFLPNCGDAYAELDCQPVIGSLDELAEWDSFCRRSFWKGGAAIH 152

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL + EA              ++L++SHLACA+  +  +N+ Q   FR + S
Sbjct: 153 IDTGMNRLGLGIAEAEGIVPRITA-GDHGITLVLSHLACAETLNHPLNAKQASHFRGIAS 211

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSGI LG  +HF L RPG +LYG        +PMQ VVT ++RI+ +R+
Sbjct: 212 AFSGVPASLSASSGIYLGQQFHFDLVRPGAALYGINPTPEADNPMQPVVTLQSRILQVRE 271

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YG      R + IAV A GYADGY       D         G    I G   
Sbjct: 272 VARGDTVGYGATWTARRPTRIAVVAAGYADGYFRAAGSSDGTR------GADVIIAGQRC 325

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P+ G+I+MD+   D+TD        G    + G  I +D++A   GT  Y++L  +G RY
Sbjct: 326 PVAGRISMDLLAVDVTDLPPNAARRGHMATLIGDGITVDELAHHFGTIGYEVLTSLGKRY 385

Query: 366 AKFY 369
           A+ Y
Sbjct: 386 ARQY 389


>gi|194015919|ref|ZP_03054534.1| alanine racemase [Bacillus pumilus ATCC 7061]
 gi|194012274|gb|EDW21841.1| alanine racemase [Bacillus pumilus ATCC 7061]
          Length = 393

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 103/386 (26%), Positives = 175/386 (45%), Gaps = 31/386 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +N F R    +I+L+A+K+N   M    G + +  AVVK NAYG G  ++A A   AG
Sbjct: 1   MDTNAFYRDTWAEINLSAIKHNVSHMKDHIGQSVQLMAVVKANAYGHGDIEVARAALKAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E V LR    +A I VL  + P   K+    N+I    S+  L   +K++
Sbjct: 61  ADVLAVAFLDEAVSLRNKGIKAPILVLGAVPPEYVKVAVRYNVIMTAYSIDWLRDVTKMV 120

Query: 117 --SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSH 173
               G    + L++D+G NRLG+   E ++      ++    QL  + +H A AD+    
Sbjct: 121 KGQMGQPIRFHLKIDSGMNRLGVKTIEQVNEVKKLVSEHSYLQLEGVFTHFATADEKDEA 180

Query: 174 VNSVQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----N 227
               Q++ F+TL+   H   +    A+S+  L   +  F + R GIS+YG +        
Sbjct: 181 YFDRQVDTFQTLLEPLHTDKLLVHCANSAAGLRFKDVLFNMVRFGISMYGLSPSEEIKDE 240

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++  ++   ++  ++    GE VSYG      +D+ I    +GYADG+   L    
Sbjct: 241 LPFKLEEAMSLHTKLAHVKHIQEGESVSYGATYTANQDTWIGTVPVGYADGWIRKL---- 296

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      +  + G    I G++ MD  M ++ D L +  G+ + + G      + +
Sbjct: 297 --------AATEVLVGGKRRKIAGRVCMDQFMIELKDKLPV--GEPVVLIGKQGEDMVSV 346

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           D++A    T NY++   IG R  + Y
Sbjct: 347 DEIAKRLETINYEVTCSIGHRVPRVY 372


>gi|78049364|ref|YP_365539.1| alanine racemase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|123584116|sp|Q3BNX4|ALR_XANC5 RecName: Full=Alanine racemase
 gi|78037794|emb|CAJ25539.1| Alanine racemase [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 365

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLARRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++  Q                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATQQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQHTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+  AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQICPLIGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVSALAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRIY 354


>gi|15600495|ref|NP_253989.1| alanine racemase [Pseudomonas aeruginosa PAO1]
 gi|20137486|sp|Q9HTQ2|ALR2_PSEAE RecName: Full=Alanine racemase, catabolic
 gi|9951618|gb|AAG08687.1|AE004943_3 catabolic alanine racemase [Pseudomonas aeruginosa PAO1]
          Length = 357

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 60  IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 120 WLKMDSGMHRVGFFPEDFSAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFAA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHA-----------ADGTLVF 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 288 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRVYS 355


>gi|261867673|ref|YP_003255595.1| alanine racemase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|293392262|ref|ZP_06636596.1| alanine racemase [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|261413005|gb|ACX82376.1| alanine racemase [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|290952796|gb|EFE02915.1| alanine racemase [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 360

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 17/368 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH  +    KI   ALK+N  ++   +  ++  AVVK NAYG G   ++ A+ N  V  F
Sbjct: 1   MHM-KPATAKISSVALKHNIQTIKQKAPESKIIAVVKANAYGHGVVFVSSAVENL-VDCF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE +KLR       I +L G    ++  +   N I  +    +     +      
Sbjct: 59  GVARLEEALKLRSNGITKPILLLEGFFSAKDLPVLAVNNIQTVVHSQEQLDALEQAKTPN 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQL 179
                L++DTG +RLG+ L E   F     +   +      +SH + AD+ +      QL
Sbjct: 119 PIKVWLKIDTGMHRLGVHLDEVDAFYQKLKSLPCVDPNIGFVSHFSRADELACGYTEKQL 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVT 237
            RF        G E S+++S GIL   + H    RPGI +YG +      K + +  V+ 
Sbjct: 179 ARFLQATEGKGG-ERSISASGGILFWQDAHLDWIRPGIIMYGISPNNTAGKEYGLIPVMN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I +R+   GE V YGG     +D+ I V AIGY DGYP             V  G
Sbjct: 238 LTSSLIAVREHKKGEPVGYGGVWMSDKDTKIGVVAIGYGDGYPR-----------DVPEG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              ++ G  VPI+GK++MDM   D+      +VGD + ++G ++ ++++A  +G  +Y+L
Sbjct: 287 TPVYLNGRRVPIVGKVSMDMLTVDLGADSQDKVGDEVILWGKELPIEEIAAITGVISYEL 346

Query: 358 LVRIGTRY 365
           + ++  R 
Sbjct: 347 ITKLTPRV 354


>gi|326939811|gb|AEA15707.1| alanine racemase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 391

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 71  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A    T 
Sbjct: 300 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENITVEEIADMLSTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|161485772|ref|NP_681250.2| alanine racemase [Thermosynechococcus elongatus BP-1]
          Length = 383

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 171/381 (44%), Gaps = 25/381 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H  E   ++IDL AL  N  S+   L+      AVVK +AYG G   +A  +   G    
Sbjct: 11  HECERAWIEIDLAALAANTRSLRQWLAPTTELLAVVKADAYGHGALTVAQTVLAHGATWL 70

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
            V ++ EG+ LR     A I VL  ++ P Q +++    L P +S+  Q   +S      
Sbjct: 71  GVATIPEGIALRQAGITAPILVLGSVNLPVQVQMMAQWQLQPTLSTPKQALIFSDYADRL 130

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L +DTG +RLG   Q+A+ F          ++  I SH A ADDP + +   Q
Sbjct: 131 REPLDVHLMIDTGMSRLGCPWQDAVGFVQFVQRLPHLRIQGIYSHFASADDPDASLMRQQ 190

Query: 179 LERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HP 231
              F  +           +   +A+S+  L   + H+ + R G+SLYG     +     P
Sbjct: 191 QAYFEQVWEQISALGLGPVRRHMANSAATLANRSSHYDMVRIGLSLYGVYPASHLRGVVP 250

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+   +RI L+++  AG  +SYG Q    +   IAV  IGYADG P  LS       
Sbjct: 251 LRPVMQVRSRITLLKEIPAGTGISYGHQFIAPQPMKIAVVGIGYADGVPRLLSN------ 304

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  ++G  +  +G ITMD  M D++D   ++ GD + + G D    + ++  A
Sbjct: 305 -----KLEVLVQGKRLRQVGAITMDQLMIDVSDMDGLQEGDVVTLLGEDGGDCLTVETWA 359

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
            A GT  +++L     R  + 
Sbjct: 360 EALGTITWEILCGFKNRLPRI 380


>gi|107104405|ref|ZP_01368323.1| hypothetical protein PaerPA_01005481 [Pseudomonas aeruginosa PACS2]
 gi|116053449|ref|YP_793776.1| alanine racemase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254238003|ref|ZP_04931326.1| catabolic alanine racemase [Pseudomonas aeruginosa C3719]
 gi|296392161|ref|ZP_06881636.1| alanine racemase [Pseudomonas aeruginosa PAb1]
 gi|313106726|ref|ZP_07792943.1| catabolic alanine racemase [Pseudomonas aeruginosa 39016]
 gi|115588670|gb|ABJ14685.1| catabolic alanine racemase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169934|gb|EAZ55445.1| catabolic alanine racemase [Pseudomonas aeruginosa C3719]
 gi|310879445|gb|EFQ38039.1| catabolic alanine racemase [Pseudomonas aeruginosa 39016]
          Length = 357

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 60  IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 120 WLKMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFAA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHA-----------ADGTLVF 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 288 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRVYS 355


>gi|22294181|dbj|BAC08012.1| alanine racemase [Thermosynechococcus elongatus BP-1]
          Length = 412

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 171/381 (44%), Gaps = 25/381 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H  E   ++IDL AL  N  S+   L+      AVVK +AYG G   +A  +   G    
Sbjct: 40  HECERAWIEIDLAALAANTRSLRQWLAPTTELLAVVKADAYGHGALTVAQTVLAHGATWL 99

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
            V ++ EG+ LR     A I VL  ++ P Q +++    L P +S+  Q   +S      
Sbjct: 100 GVATIPEGIALRQAGITAPILVLGSVNLPVQVQMMAQWQLQPTLSTPKQALIFSDYADRL 159

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L +DTG +RLG   Q+A+ F          ++  I SH A ADDP + +   Q
Sbjct: 160 REPLDVHLMIDTGMSRLGCPWQDAVGFVQFVQRLPHLRIQGIYSHFASADDPDASLMRQQ 219

Query: 179 LERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HP 231
              F  +           +   +A+S+  L   + H+ + R G+SLYG     +     P
Sbjct: 220 QAYFEQVWEQISALGLGPVRRHMANSAATLANRSSHYDMVRIGLSLYGVYPASHLRGVVP 279

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+   +RI L+++  AG  +SYG Q    +   IAV  IGYADG P  LS       
Sbjct: 280 LRPVMQVRSRITLLKEIPAGTGISYGHQFIAPQPMKIAVVGIGYADGVPRLLSN------ 333

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  ++G  +  +G ITMD  M D++D   ++ GD + + G D    + ++  A
Sbjct: 334 -----KLEVLVQGKRLRQVGAITMDQLMIDVSDMDGLQEGDVVTLLGEDGGDCLTVETWA 388

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
            A GT  +++L     R  + 
Sbjct: 389 EALGTITWEILCGFKNRLPRI 409


>gi|5690425|gb|AAD47081.1|AF165881_1 catabolic alanine racemase DadX [Pseudomonas aeruginosa PAO1]
          Length = 357

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 60  IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 120 WLKMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHA-----------ADGTLVF 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 288 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRVYS 355


>gi|332654151|ref|ZP_08419895.1| alanine racemase [Ruminococcaceae bacterium D16]
 gi|332517237|gb|EGJ46842.1| alanine racemase [Ruminococcaceae bacterium D16]
          Length = 372

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 27/383 (7%)

Query: 1   MHSNEF-LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M + +     +IDL+AL++N+ ++ A+     R   V K NAYG G   +A  L   G  
Sbjct: 1   MDTTKMRTWAEIDLSALEHNYRALRAMLPAGCRFLGVCKANAYGHGAVPVAQKLEQLGAD 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
              V  V+E  +LR       I  L         ++ +  +   +  +      S    +
Sbjct: 61  MLAVACVDEARELRQAGITLPILCLGNTPVELAPMLLEYQVTQAVGDLATGQALSDAAVA 120

Query: 118 CGVSHPYALQVDTGFNRLGLSL--QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
            G +    +++DTG +RLG     ++              +   + +H A AD  S    
Sbjct: 121 AGKTLTIHVKLDTGMSRLGFLWQGEQTAREIARLCALPGLKAEGMFTHFADADS-SEEYT 179

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
             QL +F    +  + +          +S  +L  P  H  + RPGI+LYG         
Sbjct: 180 MGQLTKFLDARAALEKLGVTFKICHCGASGAVLNYPCTHIDMVRPGIALYGYYPAPEMEG 239

Query: 230 ---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++ V+T ++RI  +R+  AG  VSYG    L RDS +AV  IGY DGYP +LS  
Sbjct: 240 LDGPGLRPVMTVKSRIAAVRELPAGTCVSYGRTAVLKRDSKLAVVPIGYGDGYPRSLSNR 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                          I G + PI+G++ MDM M D+TD   ++ GD   ++GP++  +  
Sbjct: 300 MVME-----------IHGVLCPIVGRVCMDMCMVDVTDLPDVKPGDIALVYGPELT-EKA 347

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  +GT  Y+LL  +  R  + Y
Sbjct: 348 ADLTGTIVYELLCDLNPRVPRIY 370


>gi|228997192|ref|ZP_04156817.1| Alanine racemase [Bacillus mycoides Rock3-17]
 gi|229004853|ref|ZP_04162583.1| Alanine racemase [Bacillus mycoides Rock1-4]
 gi|228756406|gb|EEM05721.1| Alanine racemase [Bacillus mycoides Rock1-4]
 gi|228762586|gb|EEM11508.1| Alanine racemase [Bacillus mycoides Rock3-17]
          Length = 391

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++++L A+K+N         +      A VK N YG G  ++A A   AGV    V  V+
Sbjct: 11  VEVNLDAVKHNVREFKKRVNDKNIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           EG++LR       I VL        K     +++  +  +  L   +++           
Sbjct: 71  EGIELREAGVTVPILVLGYTPVEVAKDAIGYDIMMTVYRIEDLKGINEIAKQLEKKAHIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F     N K  ++  + +H + AD+ +    ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVAPFLEELKNMKYIEIEGMFTHYSTADEINKIYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   L      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 191 VNAAKEMGIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHTVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP+LG++ MD  M D+T ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGIRVPVLGRVCMDQLMLDVTKAMPVQVGDEVVFYGRQGEEEISVEEIADTLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|15964880|ref|NP_385233.1| putative alanine racemase protein [Sinorhizobium meliloti 1021]
 gi|307300951|ref|ZP_07580720.1| alanine racemase [Sinorhizobium meliloti BL225C]
 gi|307321854|ref|ZP_07601240.1| alanine racemase [Sinorhizobium meliloti AK83]
 gi|20137219|sp|Q92R07|ALR_RHIME RecName: Full=Alanine racemase
 gi|15074059|emb|CAC45706.1| Putative alanine racemase [Sinorhizobium meliloti 1021]
 gi|306892523|gb|EFN23323.1| alanine racemase [Sinorhizobium meliloti AK83]
 gi|306903906|gb|EFN34492.1| alanine racemase [Sinorhizobium meliloti BL225C]
          Length = 379

 Score =  295 bits (754), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 182/375 (48%), Positives = 242/375 (64%), Gaps = 6/375 (1%)

Query: 1   MHSNEFL----RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M S EFL    RL +DLTAL +NW +MN  SG AR AAV+K +AYGLG    APALY AG
Sbjct: 1   MQSPEFLSASSRLTVDLTALADNWRAMNERSGKARAAAVLKADAYGLGVVHAAPALYAAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
            +DFFV SVEEG  LR   P  RI++L G+ PG E++ F+ +L+P+I+S  QL  +   +
Sbjct: 61  ARDFFVASVEEGADLRPLVPDGRIYILAGMWPGNEELFFENDLVPIINSEEQLAVFMAAL 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           S    HP  L VDTG NRLGLS +EAL   H+          L++SHLACADDP   +N 
Sbjct: 121 SERGDHPCVLHVDTGMNRLGLSPEEALALAHDPARPASFSPVLVMSHLACADDPGHPMNR 180

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
            QL+RFR + + ++G+ ASLA+S G+ LG +YHF LTRPGI++YGG       +PM+ VV
Sbjct: 181 YQLQRFREVTAAFEGVPASLANSGGVFLGADYHFDLTRPGIAVYGGEAVNGAVNPMKAVV 240

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           TAEARI+ +R   +G   SYG   +  RDS IA  AIGYADGY  ++SG       ++  
Sbjct: 241 TAEARIVQVRTVPSGGTASYGASVRFGRDSRIATVAIGYADGYHRSVSGGGVTLRQAMPS 300

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTN 354
           G  GF+ G  VP +G++TMD+++FD+TD     V  GDYI++FG ++ +DDVA A GT  
Sbjct: 301 GAFGFLHGMKVPHVGRVTMDLSLFDVTDLPEAAVRAGDYIEVFGRNVVIDDVARAGGTIG 360

Query: 355 YDLLVRIGTRYAKFY 369
           Y+LL  +G RY + Y
Sbjct: 361 YELLTSLGRRYHRTY 375


>gi|330501216|ref|YP_004378085.1| alanine racemase [Pseudomonas mendocina NK-01]
 gi|328915502|gb|AEB56333.1| alanine racemase [Pseudomonas mendocina NK-01]
          Length = 357

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 161/368 (43%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     LSG AR  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLDALRHNYQLARELSG-ARALAVVKADAYGHGAVRCAQALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR     A I +L G     E  + D + +  +          +          
Sbjct: 60  IEEALALREAGIGAPILLLEGFFETDELALIDQHDLWCVVHAQWQIEAIEQAQLSKPLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+GL   +                 ++++H A AD+P     + QL  F+ 
Sbjct: 120 WLKLDSGMHRVGLHPSDYQQAYRRLLASGKISKIVLMTHFARADEPECERTAEQLAVFQQ 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                   E SL +S  +L  P       RPGI LYG T       ++  +  V+T E++
Sbjct: 180 -AREGLAAEVSLRNSPAVLGWPQVPSDWVRPGIMLYGATPFEQAQEQAARLLPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 VISVRELPAGEPVGYGARFVSERPTRVGVVAMGYADGYPRHA-----------PTGTPVM 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    ++G+++MDM   D+TD     +   ++++G  +   DVA+A+G+  Y +   +
Sbjct: 288 VDGQPTRLIGRVSMDMLTVDLTDLPQAGLCSRVELWGKQVLASDVAMAAGSIPYQIFCNL 347

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 348 -RRVPLLY 354


>gi|49258690|pdb|1RCQ|A Chain A, The 1.45 A Crystal Structure Of Alanine Racemase From A
           Pathogenic Bacterium, Pseudomonas Aeruginosa, Contains
           Both Internal And External Aldimine Forms
          Length = 357

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 160/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 60  IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 120 WLXMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHA-----------ADGTLVF 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 288 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRVYS 355


>gi|219856503|ref|YP_002473625.1| hypothetical protein CKR_3160 [Clostridium kluyveri NBRC 12016]
 gi|219570227|dbj|BAH08211.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 399

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 168/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I+L  L  N   + +  GN     V+K +AYG G  +IA  L   GV    V  
Sbjct: 14  RPVWEEINLDNLVYNIGQIKSKIGNKELIGVIKADAYGHGAVEIAKVLLENGVSRLAVAI 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHP 123
           ++E ++LR    +  I VL  I       I + ++ P++ S    +  SKL         
Sbjct: 74  LDEAIELRKNKIKVPIMVLGIIPHAFLDEIMNYDIEPIVPSYSYASKLSKLAESKDKKIK 133

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G S+   +++           ++  + SH + AD+     +  Q +++
Sbjct: 134 VHIALDTGMGRIGFSIDPNSVEEIGKISKLPNIEIQSLFSHFSTADETDKAYSCEQFKKY 193

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QT 234
           + L              ++++S+ I+  P+ +  L RPGI +YG              + 
Sbjct: 194 KLLYEELVKKNVKINMRTISNSAAIMELPDTYCDLVRPGIIMYGYYPSTEVDKNNLSIKP 253

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++T +A ++ ++   +G  + YG + K  R S+IA   +GYADGY   L G         
Sbjct: 254 IMTLKANVVYVKVLESGSYIGYGRKFKCNRKSVIATLPLGYADGYTRRLFG--------- 304

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
               K  I G   P++G I MD  M D+TD   + +GD + + G         DD+A  +
Sbjct: 305 --KAKVIINGKFAPVVGNICMDQCMVDVTDVGEVNIGDEVVLIGEKDGLKFNADDIAEIT 362

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y++L  IG R  K Y
Sbjct: 363 GTISYEVLCMIGRRVPKLY 381


>gi|330890950|gb|EGH23611.1| alanine racemase [Pseudomonas syringae pv. mori str. 301020]
          Length = 357

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 164/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG    A  +K +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLAREHSGGKALAG-IKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     E  +I + N   V+ S  QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHNFWTVVHSTWQLEAIEQ-AQLAKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+GL   E                 +++SH A AD+ +S  +  Q   F 
Sbjct: 119 VWLKIDTGMHRVGLYPHEYQAAYQRLLVTGKVARIVLMSHFARADELNSGCSDEQFAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +        E SL +S  +L  P+     +RPGI LYG T           +Q V+T E+
Sbjct: 179 SF-RKGLAAEISLKNSPAVLGWPHIPSDWSRPGIMLYGATPFGQPHPLADRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II +R+  AGE V YG      R   I V A+GYADGYP                G   
Sbjct: 238 KIISVRELPAGEAVGYGATFVCDRPLRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    +LG+++MDM   D+T      +G  ++++G  +   +VA  + T  Y++   
Sbjct: 287 QIDGQPSRLLGRVSMDMLCVDLTGVPQAGLGSRVELWGKHVLASEVATRAETIPYEIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-RRVPRIYS 355


>gi|220913351|ref|YP_002488660.1| alanine racemase [Arthrobacter chlorophenolicus A6]
 gi|219860229|gb|ACL40571.1| alanine racemase [Arthrobacter chlorophenolicus A6]
          Length = 437

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 151/378 (39%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+++N   + A +  A+  AVVK +AYG G   +A A   AG     V  + E 
Sbjct: 51  AVIDLDAIRHNVRRLAAAASPAKVMAVVKADAYGHGAVPVARAALEAGASWLGVAHISEA 110

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR     A +                  +    S        +            L+V
Sbjct: 111 LALRAAGIDAPLLAWLHTTDSNFGAAVAAGVDIGCSGWELERIVAAAREQERPARIHLKV 170

Query: 129 DTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G +L+             ++ L ++  I SHLA AD+P       QL  FR  
Sbjct: 171 DTGLGRNGATLEYWDTLVGEAMEYQDQGLLRVVGIFSHLAVADEPERPETDHQLAAFRDA 230

Query: 186 I-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
           +     +        LA++   L  P+ HF L R G+ +YG +    +      ++  + 
Sbjct: 231 LAVAEDAGVDAEVRHLANTPATLSRPDTHFDLVRVGLGIYGLSPFDGQTSAELGLRPAMA 290

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
              ++   +   AG+ VSYG   +    S + +  +GYADG P             V  G
Sbjct: 291 LRTKVSQCKVVPAGQGVSYGLHYRTAAASTLGLIPLGYADGIPR------------VATG 338

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGP----DIKLDDVALASG 351
           G   + G   P++G+I MD  + D+   +     +G   ++FG         DD A A+G
Sbjct: 339 GPVRVAGTTYPVVGRIAMDQMVIDLGQGVQGAALLGAEAELFGSGADGGPTADDWARAAG 398

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+++ RI  R  + +
Sbjct: 399 TINYEIVTRISPRVPRRF 416


>gi|218897074|ref|YP_002445485.1| alanine racemase [Bacillus cereus G9842]
 gi|218544621|gb|ACK97015.1| alanine racemase [Bacillus cereus G9842]
          Length = 391

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 168/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N +       + +    A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEIDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 71  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  + +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 191 VNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GYALINGIRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|107104029|ref|ZP_01367947.1| hypothetical protein PaerPA_01005102 [Pseudomonas aeruginosa PACS2]
 gi|218894025|ref|YP_002442894.1| biosynthetic alanine racemase [Pseudomonas aeruginosa LESB58]
 gi|254244178|ref|ZP_04937500.1| biosynthetic alanine racemase [Pseudomonas aeruginosa 2192]
 gi|126197556|gb|EAZ61619.1| biosynthetic alanine racemase [Pseudomonas aeruginosa 2192]
 gi|218774253|emb|CAW30070.1| biosynthetic alanine racemase [Pseudomonas aeruginosa LESB58]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRNHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLRPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRATLAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|312621900|ref|YP_004023513.1| alanine racemase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202367|gb|ADQ45694.1| alanine racemase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 390

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 159/380 (41%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL  L  N  ++           AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEIDLDNLVYNLENIKKKILPQTHIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + S+     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSQAAQKIGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLE 180
              ++VDTG  R+G    +++++   N       +L  I SH  +  D  S      Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCEQSVNTILNIAKLPNIELEGIFSHFSSADDPDSDDFTHEQFM 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPNSSLKEHISIK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGKQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + Y
Sbjct: 357 IGTINYEVVCSFSKRIPRVY 376


>gi|228991111|ref|ZP_04151071.1| Alanine racemase [Bacillus pseudomycoides DSM 12442]
 gi|228768647|gb|EEM17250.1| Alanine racemase [Bacillus pseudomycoides DSM 12442]
          Length = 391

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++++L A+K+N         +      A VK N YG G  ++A A   AGV    V  V+
Sbjct: 11  VEVNLDAVKHNVREFKKRVNDKNIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           EG++LR       I VL        K     +++  +  +  L   +++           
Sbjct: 71  EGIELREAGVTVPILVLGYTPVDVAKDAIGYDIMMTVYRIEDLKGINEIAKQLEKKAHIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F     N K  ++  + +H + AD+ +    ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVAPFLEELKNMKYIEIEGMFTHYSTADEINKTYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K ++  L      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 191 VNTAKEMDIHLPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHTVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKLAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP+LG++ MD  M D+T ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGIRVPVLGRVCMDQLMLDVTKAMPVQVGDEVVFYGRQGEEEISVEEIADTLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|83644553|ref|YP_432988.1| alanine racemase [Hahella chejuensis KCTC 2396]
 gi|123534099|sp|Q2SLB1|ALR_HAHCH RecName: Full=Alanine racemase
 gi|83632596|gb|ABC28563.1| alanine racemase [Hahella chejuensis KCTC 2396]
          Length = 374

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 104/378 (27%), Positives = 172/378 (45%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N   +N+++ NAR AAV+K +AYG G  +IA AL         V  
Sbjct: 2   RPSRALIDLDALRHNIRLLNSIAHNARCAAVIKADAYGHGAVEIARAL-KGEAPKLAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMSCGVSH 122
            +E V LR       + VL G +  +E            V+  + QL   S++     + 
Sbjct: 61  YDEAVSLREAGVTTPLLVLEGFYSSEELADSTRWCDIEWVVHDMEQLDMLSEVAPLRKAG 120

Query: 123 P------YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           P        ++++TG NRLGL L +               +  +++H ACAD+  S +  
Sbjct: 121 PDSTRMQTWIKLNTGMNRLGLPLNKLAHVAEKLQQFPGLSVIGLMTHFACADELDSLLQQ 180

Query: 177 VQLERFR--TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHP 231
            Q   F+     +   G   S A+S+ +L  P  H    RPGI++YG +   +K      
Sbjct: 181 RQWRAFQAGMQAAGANGWSYSSANSAALLQYPETHLDWVRPGIAMYGASPMADKTGADFG 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T E+R+I  R+  AG+ + YG        + + V A+GY DGYP  +        
Sbjct: 241 LKPVMTFESRLIATRELQAGDSIGYGAAWTADAPTRMGVVAVGYGDGYPRQMQN------ 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                G    + G    I+G+++MDM   DI+      +G  ++++G  +  D+VA  + 
Sbjct: 295 -----GAPVAVCGKRTKIIGRVSMDMLTVDISHIPEARIGSEVELWGGTVSADEVAGYAS 349

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y L   + +R  + Y
Sbjct: 350 TISYTLFTGMTSRVPRVY 367


>gi|172038632|ref|YP_001805133.1| alanine racemase [Cyanothece sp. ATCC 51142]
 gi|171700086|gb|ACB53067.1| alanine racemase [Cyanothece sp. ATCC 51142]
          Length = 404

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 113/379 (29%), Positives = 166/379 (43%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++IDL+AL +N   +  L S      AVVK +AYG G   +A  +  AG +   V
Sbjct: 25  RQRAWVEIDLSALSHNVVQIKQLLSPKTTLMAVVKADAYGHGAIAVAQTVLQAGAKALAV 84

Query: 63  TSVEEGVKLRLYTPQARIFVLY-GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
            ++ EG++LR     A I +L     P +   I   NL P +    Q    S  +     
Sbjct: 85  ATLGEGIELREAGITAPILILGAINTPEEITAIAHWNLEPTLCYPEQALMVSDTLSQYEK 144

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++DTG +RLG    +  +F           LS + SHLA ADDP      +Q +
Sbjct: 145 PLSVHLKLDTGMSRLGTPWHQGTEFASLVQQLPYLNLSSVYSHLATADDPDPSHMYLQHK 204

Query: 181 RFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQ 233
           RF+T I               A+S+  L+ P  H+ L R G++LYG     +     P++
Sbjct: 205 RFKTAIDNLKAQGIVPPRLHFANSAATLIAPQLHYDLVRVGLALYGLYPADHLRSIVPLK 264

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A+I  I+   A   VSYG Q    R   IAV  IGYADG P  LS         
Sbjct: 265 PVLQVKAKITQIKSIPANTGVSYGYQFVSDRPMKIAVVGIGYADGVPRNLSNRL------ 318

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  I G     +G ITMD  M D++    ++VGD + + G D    I  D  A  
Sbjct: 319 -----QVLIHGQRACQIGAITMDQLMLDVSHLRHVKVGDVVTLIGKDEDQEISADHWAKM 373

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 374 LGTISWEILCGFKHRLPRI 392


>gi|228939234|ref|ZP_04101827.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972113|ref|ZP_04132729.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228978725|ref|ZP_04139096.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228780986|gb|EEM29193.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228787597|gb|EEM35560.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228820429|gb|EEM66461.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 408

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 166/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYIEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A    T 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENITVEEIADMLSTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|313896008|ref|ZP_07829562.1| alanine racemase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975433|gb|EFR40894.1| alanine racemase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 368

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 160/376 (42%), Gaps = 22/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++I+L A+ +N+  +      +A+  AVVK +AYG G   +A     AG +   +
Sbjct: 3   SRAAWVEINLGAIAHNYSEIRKHIQKDAKLCAVVKADAYGHGAIAVARKAIAAGAEYLAL 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            ++ E +KLR       + +L          I D ++   +  +      S    C   +
Sbjct: 63  ATISEALKLREAGFTTPLLILGLTKAENSFDIVDADITQTVCRLDLAEALSAEAVCQNKT 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L VDTG  R+G+  ++A        +    +L  + SH A AD         Q+  
Sbjct: 123 VKVHLAVDTGLGRIGVRPEDAASMARAIISLPNVELEGVFSHFALADTADKSFAMQQVRL 182

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QT 234
           F         +        +A S+ IL  P+ HF + R GI  YG       + P+    
Sbjct: 183 FAEACDAIERAGIHIPIRHIAESAAILDLPDVHFDMVRAGIIQYGIWPSNEVTRPITLHP 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ARI+ I+    G+ V YG      R++ IA  ++GYADG+               
Sbjct: 243 AMKFCARIVYIKTVAPGDSVGYGRAFIAPRETRIATISVGYADGFLRA------------ 290

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTT 353
           + GG   + G   PI G+I MD  M D+TD     +GD + +FG + +  D+VA  +GT 
Sbjct: 291 YAGGSVELHGRRAPIAGRICMDQCMIDVTDIPEAAIGDVVTLFGSETLTADEVAARAGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           +Y++L  +    ++ Y
Sbjct: 351 SYEVLCLVSKHVSRIY 366


>gi|296391770|ref|ZP_06881245.1| alanine racemase [Pseudomonas aeruginosa PAb1]
          Length = 358

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 169/369 (45%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +      QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPVALRAWHARLRNHPGVRELNLISHFACADERNHPFTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPTRIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRATLAGRVSMDMLAVDLSDLPEARVGDPVELWGARLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|218234797|ref|YP_002366787.1| alanine racemase [Bacillus cereus B4264]
 gi|296502685|ref|YP_003664385.1| alanine racemase [Bacillus thuringiensis BMB171]
 gi|218162754|gb|ACK62746.1| alanine racemase [Bacillus cereus B4264]
 gi|296323737|gb|ADH06665.1| alanine racemase [Bacillus thuringiensis BMB171]
          Length = 391

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 71  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|316933684|ref|YP_004108666.1| alanine racemase [Rhodopseudomonas palustris DX-1]
 gi|315601398|gb|ADU43933.1| alanine racemase [Rhodopseudomonas palustris DX-1]
          Length = 415

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 128/364 (35%), Positives = 182/364 (50%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  +  A VVK +AYG G   +  AL  AG + FFV ++ E 
Sbjct: 36  LTIDLDALVANWRKLEKTAVPSECAGVVKGDAYGCGAGPVVKALLGAGCKTFFVATLGEA 95

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R   P+A ++VL G  P         N  PVI  + +L  +       G     AL 
Sbjct: 96  RAVREVAPEATLYVLDGFFPYSGDEFARLNCQPVIGDLYELAEWDVFCRRTGWRGGAALH 155

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +RLGL++ EA              ++L++SHLACAD  +  +N+ Q+  FR +  
Sbjct: 156 IDTGMSRLGLTITEAQGIVPRIVA-GDHGITLVMSHLACADLVNHPLNARQVTAFREIAG 214

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSGI LGP + F L RPG +LYG        +PMQ VV  +ARI+ +R 
Sbjct: 215 QFTGVSASLSASSGIFLGPQFAFDLVRPGAALYGINPTPEADNPMQPVVDLKARIVQVRS 274

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YG      R S IAV + GYADGY       D         G +  I G   
Sbjct: 275 VERGDTVGYGATWSARRPSKIAVLSAGYADGYFRAAGSSDGTR------GAEVIIAGERC 328

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI G+I+MD+   D+TD    +   G    + G  I +D++    GT  Y++L  +G RY
Sbjct: 329 PIAGRISMDLLAVDVTDLPANAARRGMMATLIGDGITVDELGHHFGTIGYEVLTSLGPRY 388

Query: 366 AKFY 369
            + Y
Sbjct: 389 TRIY 392


>gi|16331712|ref|NP_442440.1| alanine racemase [Synechocystis sp. PCC 6803]
 gi|1001266|dbj|BAA10510.1| alanine racemase [Synechocystis sp. PCC 6803]
          Length = 400

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 110/379 (29%), Positives = 169/379 (44%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++ID  AL +N               AVVK +AYG G  ++A     AG     +
Sbjct: 31  RQRAWVEIDQAALVHNVRQFRQYVGPKTNLMAVVKADAYGHGAVRVAQTALQAGADWLAI 90

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGV 120
            ++ EG++LR     A I +L GI+ P + + I    L P + S  Q   ++ + +  G 
Sbjct: 91  ATLGEGIELREAGITAPILLLGGINSPEEIEAIAHWRLQPTLCSPEQAQLFNDILLKLGK 150

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             P  L++DTG  RLG    +A +F     +    +L+ + SHLA ADDP++     Q E
Sbjct: 151 VLPVHLKLDTGMTRLGTPWPQAANFVGLVQSLPQLRLASLYSHLATADDPNTATMLQQQE 210

Query: 181 RFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQ 233
           RF   I     +     +  LA+S+  L G  +H+ + R G+ LYG      +     ++
Sbjct: 211 RFAKAIASLRQARLPIPKLHLANSAATLHGQAWHYDMVRVGLGLYGLYPAPHLGDCLDLK 270

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  A+I  IR    G  VSYG Q        +AV  IGYADG P  LS         
Sbjct: 271 PVLTVRAKITQIRTIPPGTGVSYGHQFVSEETMPMAVVGIGYADGVPRNLSNQL------ 324

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  ++G  V  +G ITMD  M D+      +VG+ + + G D    I  D  A  
Sbjct: 325 -----EVLLRGQPVRQIGAITMDQMMVDLRGIDDPQVGEVVTLIGQDGDRQITADHWAST 379

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 380 LGTISWEILCGFKHRLPRI 398


>gi|229043862|ref|ZP_04191559.1| Alanine racemase [Bacillus cereus AH676]
 gi|228725487|gb|EEL76747.1| Alanine racemase [Bacillus cereus AH676]
          Length = 408

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLDAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|206972055|ref|ZP_03233003.1| alanine racemase [Bacillus cereus AH1134]
 gi|206732978|gb|EDZ50152.1| alanine racemase [Bacillus cereus AH1134]
          Length = 391

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 71  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|228907821|ref|ZP_04071674.1| Alanine racemase [Bacillus thuringiensis IBL 200]
 gi|228851823|gb|EEM96624.1| Alanine racemase [Bacillus thuringiensis IBL 200]
          Length = 408

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 166/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNAFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G      I ++++A   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGDEKIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|70733320|ref|YP_263094.1| alanine racemase [Pseudomonas fluorescens Pf-5]
 gi|123652058|sp|Q4K3T9|ALR_PSEF5 RecName: Full=Alanine racemase
 gi|68347619|gb|AAY95225.1| alanine racemase [Pseudomonas fluorescens Pf-5]
          Length = 357

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 167/369 (45%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +   R  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYQLARE-TSGVRALAVIKADAYGHGAVRCAQAL-EGEADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +   V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEASELALIVEHDFWCVVHSLWQLEAIEQAAVA-KPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++              +  +++SH A AD+     +S Q+  F 
Sbjct: 119 VWLKLDSGMHRVGLHPKDYQVAYQRLQASGKVEKIVLMSHFARADELDCPRSSEQVAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEA 240
                  G E SL +S  ++  P+      RPGI LYG T     +     +Q V+T E+
Sbjct: 179 A-ARQGLGAEISLRNSPAVMGWPSVPSDWVRPGIMLYGSTPFEENNSVAARLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    R   I V A+GYADGYP                G   
Sbjct: 238 KVICVRELPAGEPVGYGARFITDRPMRIGVVAMGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG+++MDM   D+TD     +G  ++++G +I   DVA A+ T  Y L   
Sbjct: 287 LVAGQRSRLLGRVSMDMLCVDLTDVPQAGLGSTVELWGKNILASDVAQAADTIPYQLFCN 346

Query: 361 IGTRYAKFY 369
           +  R    Y
Sbjct: 347 L-RRVPLVY 354


>gi|228965092|ref|ZP_04126189.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228794636|gb|EEM42145.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 408

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 168/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N +       + +    A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  + +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTARELGIQIPYIHSSNSAGSIELSNTFQNMVRVGIGVYGMYPSKEVDHTIVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGIRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|225016669|ref|ZP_03705861.1| hypothetical protein CLOSTMETH_00578 [Clostridium methylpentosum
           DSM 5476]
 gi|224950633|gb|EEG31842.1| hypothetical protein CLOSTMETH_00578 [Clostridium methylpentosum
           DSM 5476]
          Length = 388

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 99/387 (25%), Positives = 164/387 (42%), Gaps = 30/387 (7%)

Query: 1   MHS-NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           MHS       +I+L  L +N+  +    G  R  A VK +AYG G + +A  L   G Q 
Sbjct: 1   MHSYTRRTWAEINLDNLAHNYRHITRQLGTTRVIATVKADAYGHGEQHVASTLEKLGAQW 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSC 118
           F V++++E + LR +  +  I +L        K + +      + S        S   S 
Sbjct: 61  FSVSNIDEAMALRRHGIRGDILILGFTPLEDAKELAEHQLTQTIFSHEYARELSSWAQSH 120

Query: 119 GVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-- 173
            V+ P  +++DTG  R+G      +  L+   + ++    +++   SHL+ AD       
Sbjct: 121 QVTLPVHIKIDTGMTRIGFLCNGYENDLEGVRSLYSLPGLRITGTFSHLSHADSTDPDAI 180

Query: 174 -VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
                Q   F   +S  K +        L +S+G++      + L RPGISLYG      
Sbjct: 181 AFTQAQARHFDEAVSALKQLGCDPGLTHLQNSAGVICLSGGKYDLARPGISLYGLNPSAE 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++ V+  ++ I ++++   G  V YG     +  + IA   +GYADGY   LS  
Sbjct: 241 VTDKELRPVLQLKSVISMVKQVGNGIPVGYGRSYVTSAPTRIATVPVGYADGYSRLLSN- 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                      G   + G   PI+G + MD  M D+T       GD + + G D    + 
Sbjct: 300 ----------KGSVLVGGKRAPIIGNVCMDQMMIDVTGI-DAAPGDEVTLIGTDGNLSVS 348

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
            DD+A   GT +Y+++  I  R  + Y
Sbjct: 349 ADDLADLIGTISYEIVCMISKRVPRVY 375


>gi|254238354|ref|ZP_04931677.1| biosynthetic alanine racemase [Pseudomonas aeruginosa C3719]
 gi|126170285|gb|EAZ55796.1| biosynthetic alanine racemase [Pseudomonas aeruginosa C3719]
          Length = 358

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRNHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLRPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRATLAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRHYS 357


>gi|239996484|ref|ZP_04717008.1| alanine racemase [Alteromonas macleodii ATCC 27126]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 178/368 (48%), Gaps = 18/368 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  I   AL +N+ ++ AL+ ++++ AVVK +AYG G   +A  L +     F V 
Sbjct: 2   SRQTQAIIHADALLHNFKALAALAPSSQSMAVVKADAYGHGAVNVARILQHVS-SRFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +EE + LR     A I VL G     + ++ F  N I V+    QLT+          H
Sbjct: 61  IIEEAIALRDAGISAPIVVLEGAHQAKECQMAFQHNCILVMHCEEQLTWLESCPEQQRPH 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VD+G +RLG +L +    T    +  L + ++I +H ACADD  ++  + Q++ F
Sbjct: 121 -IWLKVDSGMHRLGFALSDIEGITAKYNHL-LSEQTVIATHFACADDVDNNFTNTQIDAF 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPMQTVVTAEA 240
              ++    +  S+A+S   +  P       R G+ +YG   +   N    +   +T  +
Sbjct: 179 NQ-VASKLDLPTSVANSPATVNWPASRNAWNRLGVGVYGGAVSTSQNLDIEIYPAMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            ++ +R   AGE + YG     ++ S IA   IGYADGYP                G   
Sbjct: 238 SVLAVRTIPAGEGIGYGQTWVASKPSKIATVGIGYADGYPRHCKN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I+G    ++G+++MDM   D+T   ++ VGD ++++G ++ + +VA  + T +Y+L+ R
Sbjct: 287 LIRGKRAYLVGRVSMDMITIDVTHIDNVAVGDEVELWGQNVPIQEVAANADTIDYELMTR 346

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 347 VSQRVPRI 354


>gi|220930291|ref|YP_002507200.1| alanine racemase [Clostridium cellulolyticum H10]
 gi|220000619|gb|ACL77220.1| alanine racemase [Clostridium cellulolyticum H10]
          Length = 389

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 27/379 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I L  + +N   +  ++G NA    VVK +AYG G  ++A  L   G   F V+
Sbjct: 6   NRAWAEISLDNIAHNIREIRKITGKNAEIMGVVKADAYGHGVMEVAKTLLENGASRFAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++E ++LR    +  I +L    P +   I + ++   + S       S      G   
Sbjct: 66  MLDEAIQLRRAGIEVPILILGYTDPIRANEIIENDVTQSVFSHDLAQALSDEAVRQGKKV 125

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG +R+G      A+    +        +  + +H A AD+ +      Q ER
Sbjct: 126 KIHIKIDTGMSRIGFLPGYSAVKNVVDISTLPNIIIEGLFTHFATADEKNRDYTYTQFER 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQ 233
           F ++    + I   +      +S+ ++  P  H  + RPGI LYG             ++
Sbjct: 186 FMSICCELQRIGIHIPVKHCANSAAVIEYPEMHLDMVRPGIILYGMYPSSEVDKSKIDLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T +A +I++++      +SYG      R S IA   IGYADG+   LS         
Sbjct: 246 PAMTLKANVIMVKEVEKNTSISYGRIFTTNRTSKIATIPIGYADGFTRMLSN-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDDVAL 348
               GK  I G + P++G+I MD  M D+T     +EVGD + + G      I ++DVA 
Sbjct: 298 ---KGKVLIHGELAPVVGRICMDQCMVDVTHIGSKVEVGDEVVLIGSQGQNNIMVEDVAQ 354

Query: 349 ASGTTNYDLLVRIGTRYAK 367
             G  NY+L+  +G R  +
Sbjct: 355 TIGMINYELVCIVGKRIPR 373


>gi|262275138|ref|ZP_06052949.1| alanine racemase biosynthetic [Grimontia hollisae CIP 101886]
 gi|262221701|gb|EEY73015.1| alanine racemase biosynthetic [Grimontia hollisae CIP 101886]
          Length = 358

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 168/367 (45%), Gaps = 17/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               I + AL +N   + A++ N+RT A +K N YG G   +A AL       F V  +E
Sbjct: 4   ATAVIHMAALNHNIEIIRAMAPNSRTWAAIKANGYGHGLLPVAKALSTQ-TDGFGVARLE 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E V LR    +  I +L G     +    + + +       +     +  +        L
Sbjct: 63  EAVSLRKGGIENPILLLEGFFSWADLPALEAHNLQTAVHCIEQLEALEKATLRQPLHVWL 122

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +   +F    + +  + +    +SH  CAD+    V   Q+  F  L
Sbjct: 123 KIDTGMHRLGVRPEHVSEFIERLNASPNVAKPLNFMSHFGCADELDKPVTPQQIALFNEL 182

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARI 242
                G + SLA+SSG L+ P+ HF   RPGISLYG +       +   ++  +T  + +
Sbjct: 183 TVSQPGYK-SLAASSGSLMWPDSHFDFVRPGISLYGISPVAARCGQDFGLKPAMTMTSSL 241

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+   GE V Y G+    RD+ + V AIGY DGYP                G    +
Sbjct: 242 IAVREVKKGEAVGYSGRWVAERDTQLGVVAIGYGDGYPR-----------VAPDGTPVLV 290

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VP+ G+++MDM   D+    +  VGD + ++G  + ++++A   GT  Y+L+  + 
Sbjct: 291 NGRRVPLAGRVSMDMITVDLGPDSTDSVGDEVIMWGEGLPVEEIARHVGTIGYELVTNLT 350

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 351 SRVHIVY 357


>gi|254415385|ref|ZP_05029146.1| alanine racemase [Microcoleus chthonoplastes PCC 7420]
 gi|196177860|gb|EDX72863.1| alanine racemase [Microcoleus chthonoplastes PCC 7420]
          Length = 391

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 113/378 (29%), Positives = 175/378 (46%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E   ++ID  AL +N + +  L S   +  AVVK +AYG G   +A      G     V 
Sbjct: 23  ERAWVEIDRAALAHNLNQLKQLLSAKTQLMAVVKADAYGHGATMVAQTALATGAYGLCVA 82

Query: 64  SVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           +VEEG++LR     A I +L     P Q + I    L P I +  Q   +S  +  C   
Sbjct: 83  TVEEGIQLREAGIDAPIVILGATNTPEQVRAIAHWYLQPTICTPQQALVFSDTLSRCQTP 142

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L +DTG +RLG+S Q+A +F          +L+ + SHLA AD P   V  +Q +R
Sbjct: 143 LSVHLNIDTGMSRLGMSWQQATEFVQLVQRLPHLKLASVYSHLATADSPDPTVMRLQHQR 202

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQT 234
           F   I+             LA+S+  L  P  H+   R G++LYG      ++    ++ 
Sbjct: 203 FEAAIAQLHAANIVPPCLHLANSAATLTDPALHYDWVRVGLALYGLYPAPHLHPKVNLKP 262

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  + R+  ++   AG  VSYG   +  +   +AV  IGYADG P  LS   +      
Sbjct: 263 VMQVKTRVTQVKTIPAGTGVSYGYTFRTQKQLRLAVVGIGYADGVPRNLSNKMT------ 316

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                G I+G  V  +G ITMD  M D+++   ++VG+ + + G D    I  DD A++ 
Sbjct: 317 -----GLIRGQRVSQIGAITMDQLMLDVSNIPDLQVGEIVTLIGRDGDRQISADDWAISL 371

Query: 351 GTTNYDLLVRIGTRYAKF 368
            T ++++L     R  + 
Sbjct: 372 NTISWEILCGFKHRLPRV 389


>gi|20141177|sp|P54918|ALR_SYNY3 RecName: Full=Alanine racemase
          Length = 372

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 111/382 (29%), Positives = 169/382 (44%), Gaps = 26/382 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++ID  AL +N               AVVK +AYG G  ++A     AG   
Sbjct: 1   MIRQR-AWVEIDQAALVHNVRQFRQYVGPKTNLMAVVKADAYGHGAVRVAQTALQAGADW 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKL-MS 117
             + ++ EG++LR     A I +L GI+ P + + I    L P + S  Q   ++ + + 
Sbjct: 60  LAIATLGEGIELREAGITAPILLLGGINSPEEIEAIAHWRLQPTLCSPEQAQLFNDILLK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G   P  L++DTG  RLG    +A +F     +    +L+ + SHLA ADDP++     
Sbjct: 120 LGKVLPVHLKLDTGMTRLGTPWPQAANFVGLVQSLPQLRLASLYSHLATADDPNTATMLQ 179

Query: 178 QLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSH 230
           Q ERF   I     +     +  LA+S+  L G  +H+ + R G+ LYG      +    
Sbjct: 180 QQERFAKAIASLRQARLPIPKLHLANSAATLHGQAWHYDMVRVGLGLYGLYPAPHLGDCL 239

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+T  A+I  IR    G  VSYG Q        +AV  IGYADG P  LS      
Sbjct: 240 DLKPVLTVRAKITQIRTIPPGTGVSYGHQFVSEETMPMAVVGIGYADGVPRNLSNQL--- 296

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                   +  ++G  V  +G ITMD  M D+      +VG+ + + G D    I  D  
Sbjct: 297 --------EVLLRGQPVRQIGAITMDQMMVDLRGIDDPQVGEVVTLIGQDGDRQITADHW 348

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A   GT ++++L     R  + 
Sbjct: 349 ASTLGTISWEILCGFKHRLPRI 370


>gi|89075968|ref|ZP_01162340.1| alanine racemase [Photobacterium sp. SKA34]
 gi|89048317|gb|EAR53896.1| alanine racemase [Photobacterium sp. SKA34]
          Length = 359

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 116/371 (31%), Positives = 179/371 (48%), Gaps = 22/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL +N   +   + N++  AVVK NAYG G  ++A  L N  V  + V  +E
Sbjct: 4   ATAHIDTEALAHNLGLIRQHAPNSKVLAVVKANAYGHGLLRVAQTLSN--VDAYGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G + P    ++   N+  V+ S+ QL    +           
Sbjct: 62  EALILRAGGIVKPILLLEGFYAPSDLPVLVTNNIHTVVHSIEQLEALEQTELDN-PVQVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG +RLG+  ++  DF    +  + + +    ISH   ADD SS +   QL+ F  
Sbjct: 121 VKIDTGMHRLGVRPEDLTDFMVRLNACENVAKPLRFISHFGNADDLSSDITLKQLDTFLD 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-----KSHPMQTVVTAE 239
           L   Y+G E SLA+S+GIL  P+   +  RPGI +YG +          S+ ++ V+T  
Sbjct: 181 LTQDYQG-ERSLAASAGILAWPDSQLEWIRPGIIMYGVSPFNESVRFAASYDLKPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +R    GE V YGG     RD+ + V AIGY DGYP T              G  
Sbjct: 240 SSLIAVRDVKQGEQVGYGGIWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VP+ G+++MDM   D+      +VGD   ++G  +  + VA   GT  Y+L+ 
Sbjct: 289 VLVNGRIVPMAGRVSMDMLTVDLGPDAQDKVGDTATLWGEGLPAEVVAEHIGTIAYELVT 348

Query: 360 RIGTRYAKFYT 370
           ++  R A  YT
Sbjct: 349 KLTPRVAMAYT 359


>gi|114567397|ref|YP_754551.1| alanine racemase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338332|gb|ABI69180.1| alanine racemase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 377

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 161/380 (42%), Gaps = 24/380 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +      +IDLTA+K+N   +      A   A+VK +AYG G  +++ A    GV+  
Sbjct: 1   MDNRRPTWAEIDLTAIKHNILMIRNKVSPAIIMAIVKADAYGHGMLEVSRACLQEGVEWL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V S++E + LR    ++ + VL  I     +   + ++   + S+      S+      
Sbjct: 61  GVASLDEAIHLREAGIKSPVLVLGFIPEEFAEATVEYDISASVFSLSFARALSQAASRLS 120

Query: 120 VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +    +++D+G  RLG +    +L            ++  I +H A AD         Q
Sbjct: 121 RTARVHIKIDSGMGRLGFAPIPSSLALVQEIAALPGIEVEGIFTHFADADAEDKSFTYEQ 180

Query: 179 LERFRTLISHYKG----IEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKINKS---H 230
           L  F   +S  +     I     S+S  +L  P     + R GI LYG     +      
Sbjct: 181 LRIFSNFVSDLEKGGLSIPLKHCSNSAAILDIPEARLNMVRAGIVLYGLYPSEDMKRLGL 240

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +   +T ++RI  ++    G  +SYG      + + +A   IGYADGY   LS   +  
Sbjct: 241 DIIPAMTLKSRISFLKVLEPGHYISYGRTFCCQQATRVATVPIGYADGYHRLLSNRST-- 298

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG---PDIKLDDVA 347
                      I+G  VP +G + MD  MFD++    ++ GD + +FG     +  DD+A
Sbjct: 299 ---------AVIRGEKVPSIGMVCMDQCMFDVSGLERVKEGDEVILFGKPSDGVTADDLA 349

Query: 348 LASGTTNYDLLVRIGTRYAK 367
              GT NY+++  +  R  +
Sbjct: 350 RILGTINYEIVCAVSARVPR 369


>gi|228952487|ref|ZP_04114567.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229069638|ref|ZP_04202925.1| Alanine racemase [Bacillus cereus F65185]
 gi|229150330|ref|ZP_04278548.1| Alanine racemase [Bacillus cereus m1550]
 gi|229178496|ref|ZP_04305862.1| Alanine racemase [Bacillus cereus 172560W]
 gi|228605004|gb|EEK62459.1| Alanine racemase [Bacillus cereus 172560W]
 gi|228633139|gb|EEK89750.1| Alanine racemase [Bacillus cereus m1550]
 gi|228713478|gb|EEL65366.1| Alanine racemase [Bacillus cereus F65185]
 gi|228807182|gb|EEM53721.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 408

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|302872340|ref|YP_003840976.1| alanine racemase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575199|gb|ADL42990.1| alanine racemase [Caldicellulosiruptor obsidiansis OB47]
          Length = 390

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 93/380 (24%), Positives = 160/380 (42%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +I+L  L  N  ++        +  AVVK +AYG G  +I+  L   GV    V 
Sbjct: 8   NRVWAEINLDNLLYNLENIKKKILPQTKIMAVVKADAYGHGAVEISRVLVKNGVSMLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++E ++LR +     I +L        + + +  +   + +  Q  + SK     G   
Sbjct: 68  IIDEALQLRHFNFDVPILILGFTPFELSEQVVENEISQTVYTYEQAYYLSKAAQKIGKKA 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLE 180
              ++VDTG  R+G    +++++   N       +L  I SH  +  D  S      Q  
Sbjct: 128 KIHIKVDTGMGRIGFLCCEQSVNTILNIAKLPNIELEGIFSHFSSADDPDSDDFTHEQFI 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +F   +              +A+SS  +  P Y   + R G+ LYG      + +   ++
Sbjct: 188 KFENFVKELNKNGVYFKYKHIANSSAAIRFPQYQLDVVRLGLILYGLYPNSSLKEHINLK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +AR+I +++   G  +SY  +   TR S IA   IGYADG+    S         
Sbjct: 248 PVMSVKARVINVKEVPEGFPISYNRRYITTRKSKIATIPIGYADGFTRVGSSQR------ 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   IKG    ++G I MD  M D+TD   +++GD + I G     +I  D +A  
Sbjct: 302 -----HVLIKGEFAKVVGSICMDQCMVDVTDIEDVKIGDEVVIIGKQGKNEILADHLAEQ 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++     R  + +
Sbjct: 357 IGTINYEVVCSFSKRIPRVF 376


>gi|332711200|ref|ZP_08431133.1| alanine racemase [Lyngbya majuscula 3L]
 gi|332350014|gb|EGJ29621.1| alanine racemase [Lyngbya majuscula 3L]
          Length = 408

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 115/379 (30%), Positives = 177/379 (46%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +    +ID  AL +N   +  L     +  AVVK +AYG G   +A     AG     V
Sbjct: 38  RQRAWAEIDQVALHHNLRQIQQLWRHPTQLMAVVKADAYGHGALTVARTAIEAGAGGLCV 97

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +V EG++LR    +A I +L     P Q K I    L P + +  Q   +S+ +S    
Sbjct: 98  ATVSEGIQLRQGGIKATILLLGATNTPEQVKAIAHWQLEPTLCNPQQALVFSETLSGLNQ 157

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           S P  L++DTG +RLG+  Q+A++F          +++ + SHLA AD P   V   Q +
Sbjct: 158 SLPVHLKLDTGMSRLGMPWQDAIEFVRLVQQLPNLEIASVYSHLATADSPDPTVMRQQHQ 217

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           RF+  I+             LA+S+  L     H+   R G+++YG      + K   ++
Sbjct: 218 RFKNAIAQLQAGGITPPRLHLANSAATLTDSALHYDWVRVGLAVYGLYPAEHLQKVIHLK 277

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +ARI  I+    G  +SYG Q    R   +AV  IGYADG P  LS   +     
Sbjct: 278 PVMQVKARITQIKTIPPGTGISYGHQFISNRQMRLAVVGIGYADGVPRNLSNRIN----- 332

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   I+G  VP +G ITMD  M D++D  +I+VG+ + + G      I  DD A+A
Sbjct: 333 ------VIIRGQQVPQIGAITMDQLMLDVSDIPNIQVGEIVTLIGQDGEEQISADDWAMA 386

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT +++++     R  + 
Sbjct: 387 LGTISWEIICGFKHRLPRV 405


>gi|75763091|ref|ZP_00742872.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228900692|ref|ZP_04064911.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
 gi|74489425|gb|EAO52860.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228858950|gb|EEN03391.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
          Length = 408

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 168/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N +       + +    A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVNEFKKHVNDEKIKMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  + +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTARELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTIVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGIRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|154253914|ref|YP_001414738.1| alanine racemase [Parvibaculum lavamentivorans DS-1]
 gi|154157864|gb|ABS65081.1| alanine racemase [Parvibaculum lavamentivorans DS-1]
          Length = 408

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 145/367 (39%), Positives = 202/367 (55%), Gaps = 7/367 (1%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  N+  + A +  A  +AVVK NAYGLG   +A  L   G + FFV    EG
Sbjct: 29  LTIDLDAVAANYDMLRAEAAGAEVSAVVKANAYGLGMGPVARRLAAEGCRSFFVAEANEG 88

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             LR   P A I+VL G+ PG         L+P ++S+ ++  +    + G S   AL  
Sbjct: 89  AALRALLPDAEIYVLNGLFPGTAGFYAAHGLVPCLASMAEVAEWR-EAAKGGSLKAALHF 147

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           DTG NRLG+S  +A             ++ LI+SHLACADD +S +N+ QL RFR L + 
Sbjct: 148 DTGMNRLGMSEADAAALAAEGALTAGIEVRLIMSHLACADDAASPMNARQLARFRGLRTI 207

Query: 188 ---HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
               + G +ASLA+S GI LG +YHF L RPG+SLYGG+    + HP +  VT EAR++ 
Sbjct: 208 LAGRFAGAKASLANSGGIYLGKDYHFDLVRPGVSLYGGSPFTGREHPFRPAVTVEARVLA 267

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  A E   YG   K    + +AV A GYADGY   LS            GG+  I G
Sbjct: 268 VREMAAEETAGYGATWKARGTARMAVLAAGYADGYMRALSSPRPNGDGGDDYGGQVRIAG 327

Query: 305 YMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           Y  P+ G+I+MDM + D++      ++ GD  ++ GP I +DDV L +GT  Y++L  +G
Sbjct: 328 YTAPVAGRISMDMLIVDVSGLPEGAVKRGDMAELIGPHITVDDVGLKAGTLGYEILTSLG 387

Query: 363 TRYAKFY 369
            RY + Y
Sbjct: 388 GRYMRIY 394


>gi|5690427|gb|AAD47082.1|AF165882_1 biosynthetic alanine racemase [Pseudomonas aeruginosa PAO1]
          Length = 358

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRNHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRALLAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|116053079|ref|YP_793398.1| biosynthetic alanine racemase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588300|gb|ABJ14315.1| biosynthetic alanine racemase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPVALRAWHARLRNHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLRPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRATLAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|118581006|ref|YP_902256.1| alanine racemase [Pelobacter propionicus DSM 2379]
 gi|118503716|gb|ABL00199.1| alanine racemase [Pelobacter propionicus DSM 2379]
          Length = 433

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 176/383 (45%), Gaps = 28/383 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     +IDL+AL++N+  + + +S  A   AVVK +AYG G   I+  L   GV  F V
Sbjct: 60  SRPTFAEIDLSALRHNFQLIRSSVSPQAELLAVVKADAYGHGFMDISRELERLGVNAFGV 119

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             + E ++LR       I +L G++PGQE+     N+  ++ ++ Q     +  +     
Sbjct: 120 AFLAEAIQLRKAGIDRPILLLGGVYPGQERKCIGYNISTIVFNLEQARALDRAAAKLFRK 179

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQ 178
               L+VDTG  RLG+   E   F           L  ++SH A AD+ +      + +Q
Sbjct: 180 AQLHLKVDTGMGRLGIPYAEVPSFLRELAALPHISLEGVVSHFASADELNESGRYFSRLQ 239

Query: 179 LERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHP 231
            ERF   ++      +      +A+S+  LL       L RPGI+LYG     +      
Sbjct: 240 AERFAWALAETRSAGFAPRYVHIANSAAGLLRDIPGCNLVRPGIALYGALPSPDFQGQLD 299

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+  ++RI +++    G  +SYG +      +LIA   +GYADGY   L+       
Sbjct: 300 LRPVMRLKSRIAMLKWVEPGTPISYGRRFTTGGRTLIASVPVGYADGYVRALTNR----- 354

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDV 346
                 G+  ++G    + G + MD  M D+T    + VGD + + GPD     I  +++
Sbjct: 355 ------GEALVRGERARVAGTVCMDWIMLDVTGVKGVSVGDPVVLMGPDDSGNCIHAEEL 408

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A+GT  Y++   I  R  + Y
Sbjct: 409 AEAAGTIPYEIFCGISKRVPRVY 431


>gi|49086668|gb|AAT51370.1| PA4930 [synthetic construct]
          Length = 359

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     +    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|15600123|ref|NP_253617.1| biosynthetic alanine racemase [Pseudomonas aeruginosa PAO1]
 gi|20137487|sp|Q9HUN4|ALR1_PSEAE RecName: Full=Alanine racemase, biosynthetic
 gi|9951209|gb|AAG08315.1|AE004906_3 biosynthetic alanine racemase [Pseudomonas aeruginosa PAO1]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     +    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLKPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 349 TARVPRRYS 357


>gi|119943978|ref|YP_941658.1| alanine racemase [Psychromonas ingrahamii 37]
 gi|119862582|gb|ABM02059.1| alanine racemase [Psychromonas ingrahamii 37]
          Length = 358

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +R  I+L AL++N+  +   +  ++  AV+K NAYG G  K+A  L +  V  F V  + 
Sbjct: 4   IRAVINLKALQHNFQVLQKTAPQSQIIAVIKANAYGHGMVKVAQKLQH--VHAFAVARLS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR    +  I +L G     +        +  +    +                 L
Sbjct: 62  EALILRSAGIKHPIILLGGFFKDGDLATLSAADLQCVVHSQEQVAAIMQAKLPNPLKIWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG   ++          +  + +    ++H   A++ +++  + QL  F+  
Sbjct: 122 KLDTGMHRLGFHPEQFDAVYKRLEGSINVQKPINFLTHFHSAEEVNNNATAQQLSLFKQY 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARI 242
           I    G++ SLA+S+ +   P  HF   RPGI+LYG +   +   K   ++ V+T ++ +
Sbjct: 182 IQAGSGLK-SLANSAAVFAWPETHFDAVRPGIALYGISPFADRLAKDLQLRPVMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I IR   A E V YG       D+ + V A+GY DGYP                G    +
Sbjct: 241 IAIRDHKARESVGYGAHWTAQNDTQLGVVAMGYGDGYPRLA-----------PEGTPVLV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G +VPI+G+I+MDM   D+      +VGD + ++G  +  + VA   GT  Y+L+ ++ 
Sbjct: 290 NGRIVPIVGRISMDMLTIDLGLMNQDKVGDDVTLWGEGLPAEIVAQKIGTIAYELVTKLT 349

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 350 SRVTLHY 356


>gi|325499632|gb|EGC97491.1| alanine racemase [Escherichia fergusonii ECD227]
          Length = 359

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 167/364 (45%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +EE ++
Sbjct: 8   INRRALRHNLQRLRELAPASKLVAVVKANAYGHGLIETARTLPD--ADAFGVARLEEALR 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G     +        +       +     +           +++DT
Sbjct: 66  LRAGGITQPILLLEGFFEADDLPTISAEHLQTAVHNEEQLVALETAELKEPVTVWMKLDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++A  F    S  K + Q   I+SH A AD+P S     QL+ F T     
Sbjct: 126 GMHRLGVLPEQAEAFYQRLSQCKNVRQPVNIVSHFARADEPQSGATEKQLDIFNTFCEGK 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILI 245
            G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + +I +
Sbjct: 186 PG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEDGTTGADFGCQPVMSLTSSLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE V YGG     RD+ + V A+GY DGYP                G    + G 
Sbjct: 245 REHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+ +R 
Sbjct: 294 EVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAAMTKVSAYELITRLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMKY 357


>gi|297159652|gb|ADI09364.1| alanine racemase [Streptomyces bingchenggensis BCW-1]
          Length = 384

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 100/387 (25%), Positives = 159/387 (41%), Gaps = 30/387 (7%)

Query: 1   MHSNEF-LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+      R  +DL AL+ N  ++ A +  A   AVVK +AYG G    A A   AG   
Sbjct: 1   MNETPMRARAVVDLAALRANVRALRAAAPGAELMAVVKSDAYGHGAVPCARAAREAGASW 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSC 118
               + EE + LR      R+        G  +   + ++   +S++       +    C
Sbjct: 61  LGTATPEEALALRAAGDTGRLLCWLWTPGGPWREAIEADVDVSLSAMWALREAVAAAREC 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVN 175
           G +    L+ DTG  R G    +  +    +   +      +    SH ACAD+P     
Sbjct: 121 GRTARVQLKADTGLGRNGCPPADWPELVAAARAAEAEGTVTVTGLWSHFACADEPGHPSI 180

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           + QL+ FRTL++  +          +A+S   L  P  HF L R GI++YG +      H
Sbjct: 181 AAQLKVFRTLLAQAEQAGLRPEVRHIANSPATLTLPESHFDLVRTGIAVYGISPSPEVGH 240

Query: 231 PMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           P       V+T  A +  +++   G  VSYG +      + +A+  +GYADG P   SG 
Sbjct: 241 PGDFGLRPVMTLVASLASVKRVPGGHGVSYGHRYITPGPTTLALVPVGYADGVPRHASGT 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIK 342
                      G   + G    + G + MD  + D+        GD   +FGP    +  
Sbjct: 301 -----------GPVLVAGKWRTVAGTVAMDQFVVDLGGDA-AAPGDEAVLFGPGDRGEPT 348

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
            +D A A G+  Y+++ RI  R  + Y
Sbjct: 349 AEDWARAVGSIAYEIVTRISARVPRVY 375


>gi|30020200|ref|NP_831831.1| alanine racemase [Bacillus cereus ATCC 14579]
 gi|228962874|ref|ZP_04124117.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229079274|ref|ZP_04211819.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|229109560|ref|ZP_04239150.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|229127502|ref|ZP_04256494.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|229144707|ref|ZP_04273107.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|29895750|gb|AAP09032.1| Alanine racemase [Bacillus cereus ATCC 14579]
 gi|228638759|gb|EEK95189.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|228655959|gb|EEL11805.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|228673896|gb|EEL29150.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|228704024|gb|EEL56465.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|228796804|gb|EEM44171.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 408

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|295838450|ref|ZP_06825383.1| alanine racemase [Streptomyces sp. SPB74]
 gi|197695751|gb|EDY42684.1| alanine racemase [Streptomyces sp. SPB74]
          Length = 378

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 152/379 (40%), Gaps = 29/379 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R +IDL AL+ N   +   +  A   AVVK +AYG G    A A   AG     V +  
Sbjct: 8   PRAEIDLAALRANVRLLRERAPGAAFMAVVKADAYGHGALACARAAREAGASWLGVATPA 67

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E + LR    + R+        G  +   + ++   +S    L   +      G +    
Sbjct: 68  EALALRAEGVEGRMLCWLWTPGGPWRAAIEADIDVSVSGQWALDEVAVAAREAGRTARVH 127

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLERF 182
           L+ DTG  R G    +      N+   +     Q+  + SH ACAD+P     + QL  F
Sbjct: 128 LKADTGLGRNGCQPADWSALLGNALALQAEGAVQVVGLWSHFACADEPGHPSIAAQLALF 187

Query: 183 RTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQ 233
             + +       +     +A+S   L  P  H+ L RPGI++YG +            ++
Sbjct: 188 EEMTALAARLGVRAEARHIANSPATLGLPESHYDLVRPGIAMYGLSPSPAMGTHGDFGLR 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+   A + L+++   G  VSYG       ++ + +  +GY DG P   SG        
Sbjct: 248 PVMRLLAPLALVKQVPGGHGVSYGHHYVTPGETTLGLVPLGYGDGIPRHASGT------- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   + G    + G+I MD  + D+        G    +FGP    +   +D A A
Sbjct: 301 ----GPVLVNGKWHTVAGRIAMDQFVVDLGGDTPA-PGSEAVLFGPGDRGEPSAEDWARA 355

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           + T  Y+++ RIG R  + 
Sbjct: 356 ADTIVYEIVTRIGARVPRV 374


>gi|228920796|ref|ZP_04084136.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|229190195|ref|ZP_04317198.1| Alanine racemase [Bacillus cereus ATCC 10876]
 gi|228593312|gb|EEK51128.1| Alanine racemase [Bacillus cereus ATCC 10876]
 gi|228838907|gb|EEM84208.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 408

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 167/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++IDL A+K+N         +   +  A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEIDLNAVKHNVKEFKKHVNDEEIKMMAAVKANGYGHGAVEVAKAAIEAGIHQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLHGINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|113461082|ref|YP_719150.1| alanine racemase [Haemophilus somnus 129PT]
 gi|112823125|gb|ABI25214.1| alanine racemase [Haemophilus somnus 129PT]
          Length = 359

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 15/362 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
               +I   ALK+N   +   + N++  A+VK NAYG G E ++  L++  V  F V  +
Sbjct: 5   PPTARISSVALKHNIQVIKQKAKNSKVIAIVKANAYGHGLEFVSSTLHHL-VDCFGVARL 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E ++L        I +L G     +  I   N I  +    +  +  K           
Sbjct: 64  SEALRLCAEGITKPILLLEGFFSEDDLPIIAVNNIQTVIHNQEQLYELKKAKLPNKIKVW 123

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L++DTG +RLG+ L++  DF          +    +SH + AD+       +QLERF  +
Sbjct: 124 LKIDTGMHRLGVDLEQVEDFYQQLVQCSNVKEIGFLSHFSRADELMCGYTEIQLERFLQV 183

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARII 243
               +G E S+ +SSGIL     +    RPGI +YG +      + + +  V+T  + +I
Sbjct: 184 TEGKQG-ERSIVASSGILFWQQAYLDWIRPGIIMYGISPNNTPAEVYGLIPVMTLTSSLI 242

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            IR    GE V YGG     RD+ I V AIGY DGYP  +             G   +I 
Sbjct: 243 TIRNHKKGEPVGYGGSWISERDTKIGVVAIGYGDGYPRDM-----------PQGTPVYIN 291

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  VPI+G+++MDM   D+      +VGD + ++G ++ +++++  SG  +Y+L+ ++  
Sbjct: 292 GRKVPIVGRVSMDMLTVDLGIESQDKVGDEVILWGKELPIEEISAISGMISYELITKLTP 351

Query: 364 RY 365
           R 
Sbjct: 352 RV 353


>gi|49481282|ref|YP_036225.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49332838|gb|AAT63484.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 391

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEITCMLDRRIPRVY 375


>gi|253682108|ref|ZP_04862905.1| alanine racemase [Clostridium botulinum D str. 1873]
 gi|253561820|gb|EES91272.1| alanine racemase [Clostridium botulinum D str. 1873]
          Length = 387

 Score =  293 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 167/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +I+L  L +N   +  +S + +   +VK +AYG G   +AP L   G   
Sbjct: 1   MFKHLRPVWAEINLDNLASNMKEIKKISSSKKIIGIVKADAYGHGALDVAPTLIENGATG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V  + EGV+LR    +  I VL    P     +   ++   + S+      S++    
Sbjct: 61  LAVAVINEGVELRRSGIECPIMVLGFTAPTLIDTLLRHDIEQTVFSLEYAKQLSEVAEKM 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G     E++            ++  I +H + AD+ +      
Sbjct: 121 HKKIKIHIAVDTGMGRIGFLPNKESVQDVKKISKLPNVEIKGIFTHFSTADESNKEYTYY 180

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--- 229
           QL++F       K          +A+S+ I+      F+  RPGI LYG           
Sbjct: 181 QLKKFNEFYDELKKENVNIETRHIANSAAIMELSETQFEGVRPGIILYGYYPSDEVDKSK 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+  +  I+ I+K  +G+ +SYG + K  R+S+IA   +GYADGY   L      
Sbjct: 241 LKLKPVMELKTNIVHIKKISSGQYISYGRKFKTERESIIATLPVGYADGYTRLLFN---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD----IKLD 344
                    K  I G   PI+G+I MD  M DITD    +++GD + + G +    I  D
Sbjct: 297 -------KAKVIINGQFAPIIGRICMDQCMVDITDIKGDVKLGDEVILMGQENGIKIDAD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A   GT NY+++  I  R  + Y
Sbjct: 350 DIASMLGTINYEVVCMISKRVPRVY 374


>gi|311693521|gb|ADP96394.1| alanine racemase [marine bacterium HP15]
          Length = 358

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 23/372 (6%)

Query: 6   FLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             R    +IDL AL+ N+ +    +G AR  AVVK + YG G   +A AL ++    + V
Sbjct: 1   MPRSTIARIDLDALRRNFQTAQRRAGGARVMAVVKADGYGHGIGPVASAL-DSLAPKYAV 59

Query: 63  TSVEEGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             +EE   +R     Q+ + +              +   PV  S  QL +  +L +    
Sbjct: 60  ACLEEARAIRETGLIQSVVLLQGVHAEADIDECARSGFEPVFHSFQQLAWLERLDTWP-- 117

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLE 180
             + L+V++G NRLG    E                    ++H ACADDP S + + Q  
Sbjct: 118 -AFWLKVNSGMNRLGFHPDELAGVMSRLQAMSADTELLGFVTHFACADDPDSAMTAQQTA 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVT 237
            F    S +  +  S+A+S+         F  +RPGI LYGG+  +        ++ V++
Sbjct: 177 VFEKATSSFPDLMKSVANSAAHFRPGQPMFDWSRPGIMLYGGSPMVGTTGPELGLEPVMS 236

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            EA +I  R   AGE V YG      RD+ + + AIGY DGYP                 
Sbjct: 237 LEAPLISTRMVPAGESVGYGASWVADRDTRMGMVAIGYGDGYPRHAG-----------TN 285

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               I G  + ++G+++MDM   D+T++   + GD ++++G  + +D+VA  +GT +Y+L
Sbjct: 286 TPAAINGQRIRLIGRVSMDMLAVDLTNAPDAKEGDSVELWGRTVGVDEVAACAGTISYEL 345

Query: 358 LVRIGTRYAKFY 369
           +  I  R  + Y
Sbjct: 346 MTGITGRVPRQY 357


>gi|325929301|ref|ZP_08190432.1| alanine racemase [Xanthomonas perforans 91-118]
 gi|325929312|ref|ZP_08190443.1| alanine racemase [Xanthomonas perforans 91-118]
 gi|325540323|gb|EGD11934.1| alanine racemase [Xanthomonas perforans 91-118]
 gi|325540334|gb|EGD11945.1| alanine racemase [Xanthomonas perforans 91-118]
          Length = 365

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLARRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQHTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+  AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
             G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 ADGQICPLIGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVSALAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRIY 354


>gi|218551364|ref|YP_002385156.1| alanine racemase [Escherichia fergusonii ATCC 35469]
 gi|218358906|emb|CAQ91565.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia
           fergusonii ATCC 35469]
 gi|324112309|gb|EGC06287.1| alanine racemase [Escherichia fergusonii B253]
          Length = 359

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 167/364 (45%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +EE ++
Sbjct: 8   INRRALRHNLQRLRELAPASKLVAVVKANAYGHGLIETARTLPD--ADAFGVARLEEALR 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G     +        +       +     +           +++DT
Sbjct: 66  LRAGGITQPILLLEGFFEADDLPTISAEHLQTAVHNEEQLVALETAELKEPVIVWMKLDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++A  F    S  K + Q   I+SH A AD+P S     QL+ F T     
Sbjct: 126 GMHRLGVLPEQAEAFYQRLSQCKNVRQPVNIVSHFARADEPQSGATEKQLDIFNTFCEGK 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILI 245
            G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + +I +
Sbjct: 186 PG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEDGTTGADFGCQPVMSLTSSLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE V YGG     RD+ + V A+GY DGYP                G    + G 
Sbjct: 245 REHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+ +R 
Sbjct: 294 EVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAAMTKVSAYELITRLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMKY 357


>gi|163797505|ref|ZP_02191456.1| alanine racemase [alpha proteobacterium BAL199]
 gi|159177254|gb|EDP61813.1| alanine racemase [alpha proteobacterium BAL199]
          Length = 381

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 135/368 (36%), Positives = 196/368 (53%), Gaps = 15/368 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             RL IDL A++ N+  +    G    A VVK + YGLG  ++APAL   G + FFV ++
Sbjct: 12  LSRLTIDLGAVRRNYRRLVKELGGVPCAGVVKADGYGLGAARVAPALSAEGCRIFFVATL 71

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPY 124
           +E V+LR   P A +  L G+  G E +     ++PV++++ Q+T +       G S P 
Sbjct: 72  DEAVRLRPVLPDATVCCLNGLLAGTEDVFVAHRIVPVLNALDQITRWQTHGGRLGRSLPA 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L VDTG NRLGL   E                  +ISHLA AD+P +  N++QL RF+ 
Sbjct: 132 ILHVDTGMNRLGLGDDEWDRVLGTPGVLDGVDWQYLISHLAVADEPDNPANALQLARFQR 191

Query: 185 LISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
           +      G++ASLA+SSGI LG  YHF L RPG++LYGG       +P++  +  E R++
Sbjct: 192 VRQRMPNGMKASLANSSGIFLGTPYHFDLGRPGVALYGGRPSSIGPNPLECPIRLEGRVL 251

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R   AG+ V YG      R S IA  A GYADGY  +LSG            G   + 
Sbjct: 252 QVRDVPAGDSVGYGNSWTAGRRSRIATVAAGYADGYLRSLSG-----------AGTVALG 300

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
               P++G+++MD+   D+TD    E+  G ++++ GP I  D  A A+GT  Y+LL  +
Sbjct: 301 ARTCPVVGRVSMDLITVDVTDVPPAEIAPGTFVEVLGPTITPDAAADAAGTIGYELLTAL 360

Query: 362 GTRYAKFY 369
           G RY + Y
Sbjct: 361 GRRYVRHY 368


>gi|26250840|ref|NP_756880.1| alanine racemase [Escherichia coli CFT073]
 gi|110644389|ref|YP_672119.1| alanine racemase [Escherichia coli 536]
 gi|191171958|ref|ZP_03033503.1| alanine racemase [Escherichia coli F11]
 gi|227886936|ref|ZP_04004741.1| alanine racemase [Escherichia coli 83972]
 gi|300980476|ref|ZP_07175023.1| alanine racemase [Escherichia coli MS 200-1]
 gi|300992970|ref|ZP_07180125.1| alanine racemase [Escherichia coli MS 45-1]
 gi|301047007|ref|ZP_07194116.1| alanine racemase [Escherichia coli MS 185-1]
 gi|33301027|sp|Q8FB20|ALR1_ECOL6 RecName: Full=Alanine racemase, biosynthetic
 gi|26111271|gb|AAN83454.1|AE016770_254 Alanine racemase, biosynthetic [Escherichia coli CFT073]
 gi|110345981|gb|ABG72218.1| alanine racemase, biosynthetic [Escherichia coli 536]
 gi|190907723|gb|EDV67317.1| alanine racemase [Escherichia coli F11]
 gi|227836077|gb|EEJ46543.1| alanine racemase [Escherichia coli 83972]
 gi|300301052|gb|EFJ57437.1| alanine racemase [Escherichia coli MS 185-1]
 gi|300307778|gb|EFJ62298.1| alanine racemase [Escherichia coli MS 200-1]
 gi|300406744|gb|EFJ90282.1| alanine racemase [Escherichia coli MS 45-1]
 gi|307556202|gb|ADN48977.1| alanine racemase [Escherichia coli ABU 83972]
 gi|315291550|gb|EFU50910.1| alanine racemase [Escherichia coli MS 153-1]
 gi|324014852|gb|EGB84071.1| alanine racemase [Escherichia coli MS 60-1]
          Length = 359

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 167/364 (45%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +EE ++
Sbjct: 8   INRRALRHNLQRLRELAPASKLVAVVKANAYGHGLIETARTLPD--ADAFGVARLEEALR 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G     +        +       +     +           +++DT
Sbjct: 66  LRAGGITRPILLLEGFFEADDLPTISAEHLHTAVHNEEQLVALENAELKEPVTVWMKLDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++A  F    S  K + Q   I+SH A AD+P S     QL+ F T     
Sbjct: 126 GMHRLGVLPEQAEAFYQRLSQCKNVRQPVNIVSHFARADEPQSGATEKQLDIFNTFCEGK 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILI 245
            G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + +I +
Sbjct: 186 PG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEDGTTGADFGCQPVMSLTSSLIAV 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE V YGG     RD+ + V A+GY DGYP                G    + G 
Sbjct: 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGR 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+ +R 
Sbjct: 294 EVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRV 353

Query: 366 AKFY 369
           A  Y
Sbjct: 354 AMKY 357


>gi|92117813|ref|YP_577542.1| alanine racemase [Nitrobacter hamburgensis X14]
 gi|91800707|gb|ABE63082.1| alanine racemase [Nitrobacter hamburgensis X14]
          Length = 398

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 128/365 (35%), Positives = 182/365 (49%), Gaps = 11/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  A VVK +AYG G   +  AL  AG + FFV +++E 
Sbjct: 34  LTVDLDAIVANWRKLEKTAVPAECAGVVKADAYGCGARPVVRALSAAGCRTFFVATLDEA 93

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
              R   P A I+VL GI           N  PVI  + +L  +       G +   A+ 
Sbjct: 94  RVARAAAPSADIYVLDGIFQNCADAFAAINCRPVIGDLNELAEWDVFCRRTGWAGGAAIH 153

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG +L EA        +     ++L++SHLACA+  +  +N+ Q+  FR +  
Sbjct: 154 IDTGMNRLGFTLDEAQAIL-PRIDAGDHGITLVMSHLACAETLNHPLNARQVAAFREIAR 212

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASLA+SSGI LGP Y F L RPG++LYG        +PMQ VV  +ARI+  R 
Sbjct: 213 LFSGVPASLANSSGIFLGPQYQFDLVRPGVALYGVNPTPEADNPMQPVVELKARIVQTRT 272

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R + +A+ A GYADGY       D         G    + G   
Sbjct: 273 IDKGESVGYGATWTARRTTRLAIVATGYADGYFRAGGSNDGTR------GADVVVAGTRC 326

Query: 308 PILGKITMDMTMFDITDSLS---IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           P+ G+I+MD+   DITD      +  G    + G  I +D++A   GT  Y++L  +G R
Sbjct: 327 PVAGRISMDLLAIDITDLPPNAGVRRGHLATLIGDGITVDELAHHFGTIGYEVLTSLGGR 386

Query: 365 YAKFY 369
           Y + Y
Sbjct: 387 YRRIY 391


>gi|320529492|ref|ZP_08030578.1| alanine racemase [Selenomonas artemidis F0399]
 gi|320138286|gb|EFW30182.1| alanine racemase [Selenomonas artemidis F0399]
          Length = 368

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 162/376 (43%), Gaps = 22/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++I+L A+ +N+  +      +A+  AVVK +AYG G   +A     AG +   +
Sbjct: 3   SRAAWVEINLGAIAHNYGEIRKHIQKDAKLCAVVKADAYGHGAIAVARKAIAAGAEYLAL 62

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            ++ E +KLR       + +L          I D ++   +  +      S    C   +
Sbjct: 63  ATISEALKLREAGFTTPLLILGLTKAENSFDIVDADITQTVCRLDLAEALSAEAVCQNKT 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L VDTG  R+G+  ++A        +    +L  + SH A AD         Q+  
Sbjct: 123 VKVHLAVDTGLGRIGVRPEDAASMARAIISLPNVELEGVFSHFALADTADKSFAMQQVRL 182

Query: 182 FRTLIS--HYKGIEASLAS---SSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QT 234
           F        + GI   +     S+ IL  P+ HF + R GI  YG       + P+  + 
Sbjct: 183 FAEACDAIEHAGIHIPIRHIAESAAILDLPDVHFDMVRAGIIQYGIWPSSEVTRPITLRP 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ARI+ I+    G+ V YG      R++ IA  ++GYADG+               
Sbjct: 243 AMKFCARIVYIKTIAPGDSVGYGRAFIAPRETRIATISVGYADGFLRA------------ 290

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTT 353
           + GG   + G   PI G+I MD  M D+TD     VGD + +FG + +  D+VA  +GT 
Sbjct: 291 YAGGSVELHGRRAPIAGRICMDQCMIDVTDIPEAAVGDVVTLFGSETLTADEVAARAGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           +Y++L  +    ++ Y
Sbjct: 351 SYEVLCLVSKHVSRIY 366


>gi|218894405|ref|YP_002443275.1| alanine racemase [Pseudomonas aeruginosa LESB58]
 gi|218774634|emb|CAW30451.1| catabolic alanine racemase [Pseudomonas aeruginosa LESB58]
          Length = 357

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 60  IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 120 WLKMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFAA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 180 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 239 VISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHA-----------ADGTLVF 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 288 IDGNPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRVYS 355


>gi|42781229|ref|NP_978476.1| alanine racemase [Bacillus cereus ATCC 10987]
 gi|42737151|gb|AAS41084.1| alanine racemase [Bacillus cereus ATCC 10987]
          Length = 391

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNAAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GYALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|186685683|ref|YP_001868879.1| alanine racemase [Nostoc punctiforme PCC 73102]
 gi|186468135|gb|ACC83936.1| alanine racemase [Nostoc punctiforme PCC 73102]
          Length = 395

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 114/381 (29%), Positives = 178/381 (46%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL  N   +   LS   +  AVVK +AYG G   +A  +  +G     V
Sbjct: 23  SQRAWVEIDLGALSYNVQQLVQFLSPRTQLMAVVKADAYGHGALTVAQTVIQSGASWLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKL---MSC 118
            +V E ++LR    +A I +L   H P Q   I   NL P + S  Q   +S +   M+ 
Sbjct: 83  ATVPEAIQLREGGIEAPILILGATHTPEQIHAIAQWNLQPTLCSPKQALVFSNILESMNH 142

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G   P  +++DTG +RLG + Q+A +F           ++ I SHLA ADDP +     Q
Sbjct: 143 GSPVPVHIKLDTGMSRLGTNWQQAGEFVQLVQRLPHLSIASIYSHLATADDPDTTAMEEQ 202

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             RF   I+  K +E       LA+S+  L  P  H+ + R G+++YG     +  + + 
Sbjct: 203 HRRFEEAIAQIKAMEIEAPCLHLANSAAALTDPALHYDIVRVGLAVYGLYPAPHLQNAID 262

Query: 234 --TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
              V+  +AR+  ++   AG  VSYG +    R+  +AV  IGYADG P +LS       
Sbjct: 263 LKPVLQLKARVTQVKTIAAGTAVSYGHKFIAPRELRLAVVGIGYADGVPRSLSN------ 316

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  I G  V  +G ITMD  M D++   +I+ G+ + + G      I  DD A
Sbjct: 317 -----KMQALIHGQRVSQIGTITMDQLMLDVSAIPNIQEGEVVTLLGKQGKEQISADDWA 371

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T ++++L     R  + 
Sbjct: 372 EQLNTISWEILCGFKHRLPRV 392


>gi|170719388|ref|YP_001747076.1| alanine racemase [Pseudomonas putida W619]
 gi|169757391|gb|ACA70707.1| alanine racemase [Pseudomonas putida W619]
          Length = 357

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    K         
Sbjct: 60  IEEALELRAAGIKAPMLLLEGFFEASELSLIAEHDLWCVVHSLWQLEAIEKT-PVHKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL  ++  +              +++SH A AD+  +     Q+  F 
Sbjct: 119 LWLKLDSGMHRVGLHPKDYHEAYQRLLASGKVARIVLMSHFARADELDADATEQQIAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S G+L  P+      RPGI LYG T       ++  +Q V+T ++
Sbjct: 179 A-ARQGLAAECSLRNSPGVLAWPHAPSDWVRPGIMLYGATPFEVAQAQAERLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RVISVRELPAGEPVGYGAKFISPRPTRVGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+TD     +G  ++++G  +   +VA+ +GT  Y +   
Sbjct: 287 MVAGKRSQLIGRVSMDMLCIDLTDVPEATIGSPVELWGKHVLASEVAMHAGTIPYQIFCN 346

Query: 361 IGTRYAKFY 369
           +  R    Y
Sbjct: 347 L-KRVPLDY 354


>gi|170717657|ref|YP_001784734.1| alanine racemase [Haemophilus somnus 2336]
 gi|168825786|gb|ACA31157.1| alanine racemase [Haemophilus somnus 2336]
          Length = 359

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 104/362 (28%), Positives = 171/362 (47%), Gaps = 15/362 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
               +I   ALK+N   +   + N++  A+VK NAYG G E ++  L++  V  F V  +
Sbjct: 5   PPTARISSVALKHNIQVIKQKAKNSKVIAIVKANAYGHGLEFVSSTLHHL-VDCFGVARL 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E ++L        I +L G     +  I   N I  +    +  +  K           
Sbjct: 64  SEALRLCTEGITKPILLLEGFFSEDDLPIIAVNNIQTVIHNQEQLYVLKKAKLPNKIKVW 123

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L++DTG +RLG+ L++  DF          +    +SH + AD+       +QLERF  +
Sbjct: 124 LKIDTGMHRLGVDLEQVEDFYQQLVQCSNVKEIGFLSHFSRADELMCGYTEIQLERFLQV 183

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARII 243
               +G E S+ +SSGIL     +    RPGI +YG +      + + +  V+T  + +I
Sbjct: 184 TEGKQG-ERSIVASSGILFWQQAYLDWIRPGIIMYGISPNNTPAEVYGLIPVMTLTSSLI 242

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            IR    GE V YGG     RD+ I V AIGY DGYP  +             G   +I 
Sbjct: 243 TIRNHKKGEPVGYGGSWISERDTKIGVVAIGYGDGYPRDM-----------PQGTPVYIN 291

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  VPI+G+++MDM   D+      +VGD + ++G ++ +++++  SG  +Y+L+ ++  
Sbjct: 292 GRKVPIVGRVSMDMLTVDLGIESQDKVGDEVILWGKELPIEEISAISGMISYELITKLTP 351

Query: 364 RY 365
           R 
Sbjct: 352 RV 353


>gi|307297643|ref|ZP_07577449.1| alanine racemase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916903|gb|EFN47285.1| alanine racemase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 369

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 26/370 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL+A + N   ++  +  A+   VVK +AYG G  +++     +GV    V  +EEG+K
Sbjct: 10  IDLSAYRQNLVYLSGKASPAKLMVVVKADAYGHGAVELSKVAQESGVDRLAVAFLEEGIK 69

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP-YALQVD 129
           +R       I VL  +   +     + +L   +SS  Q      ++      P + L VD
Sbjct: 70  IRQSGISLPILVLNYVEKKEIPTAKEFSLTLSLSSFAQ---LENIIGLNKQLPDFQLVVD 126

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-- 187
           TG  RLGL  +E+++  +++  K    ++   +H A AD+  S     Q E F   +   
Sbjct: 127 TGMRRLGLEWEESIELYNSAVRK-GINITGAYTHFATADEKGSGFVLEQREAFGRFLHGL 185

Query: 188 ---HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +  E  +++S+G +   N  F   R GI+ YG          ++ V++  + +  
Sbjct: 186 GQRRNRHFETHISNSAGTIYFDNSDFSYVRAGIATYGLQPSKETDENLKPVLSWVSCVSF 245

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +++   G  VSYG      RD L+A   +GYADGY   LS             G   I G
Sbjct: 246 VKRIRTGYSVSYGRTFVADRDMLVATIPVGYADGYNRLLSNR-----------GYVIISG 294

Query: 305 YMVPILGKITMDMTMFDITDSL-SIEVGDYIQIF----GPDIKLDDVALASGTTNYDLLV 359
               +LG++ MD  + DI+     + +GD + I     G  I  +++A   GT NY+++ 
Sbjct: 295 KRCKVLGRVCMDQFVVDISHIEKPVSIGDEVVIVGTQEGESISAEEIADLCGTINYEVVC 354

Query: 360 RIGTRYAKFY 369
            I +R  + Y
Sbjct: 355 SISSRVPRVY 364


>gi|28373266|pdb|1EPV|A Chain A, Alanine Racemase With Bound Inhibitor Derived From D-
           Cycloserine
 gi|28373267|pdb|1EPV|B Chain B, Alanine Racemase With Bound Inhibitor Derived From D-
           Cycloserine
 gi|28373268|pdb|1FTX|A Chain A, Crystal Stucture Of Alanine Racemase In Complex With D-
           Alanine Phosphonate
 gi|28373269|pdb|1FTX|B Chain B, Crystal Stucture Of Alanine Racemase In Complex With D-
           Alanine Phosphonate
          Length = 387

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 152/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A     AG     V
Sbjct: 4   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAV 63

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 64  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 123

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L +DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 124 HFHLXMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 183

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 184 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 243

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 244 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 294

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 295 ---HVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 349

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 350 TINYEVPCTISYRVPRIF 367


>gi|152975352|ref|YP_001374869.1| alanine racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152024104|gb|ABS21874.1| alanine racemase [Bacillus cytotoxicus NVH 391-98]
          Length = 392

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++++L A+K+N         N      A VK NAYG G  ++A A   AGVQ   V  V+
Sbjct: 11  VEVNLDAIKHNVKEFKKRIHNENITMMAAVKANAYGHGAVEVAKAATEAGVQQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           EG++LR       I VL        +   + +++  +  + +L+  +++           
Sbjct: 71  EGIELREAGVTVPILVLGYTPVEAAQDAIEYDIMMTVYRIEELSSINEIAKQLQTKARVH 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F          ++  + +H + AD+      ++Q + F   
Sbjct: 131 VKIDTGMSRIGLQEEEVAPFLKELQKMNHIEVEGMYTHYSTADELDKTYTNMQTKLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 191 VNTAKELGMPIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I++A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKRAKKNRGVSYGNTYMTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP+LG++ MD  M D+T ++ + VGD +  +G     +I +++VA    T 
Sbjct: 300 GHALINGIRVPVLGRVCMDQLMLDVTKAMPVRVGDEVVFYGKQGDEEISVEEVADLLDTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRAY 375


>gi|104784314|ref|YP_610812.1| alanine racemase [Pseudomonas entomophila L48]
 gi|122401266|sp|Q1I2V7|ALR_PSEE4 RecName: Full=Alanine racemase
 gi|95113301|emb|CAK18029.1| alanine racemase 2, PLP-binding, catabolic [Pseudomonas entomophila
           L48]
          Length = 357

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 105/366 (28%), Positives = 170/366 (46%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVVKADAYGHGAVRCALALETE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEQT-PVRKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++DTG +R+G+  ++  D              +++SH A AD+  +     Q+  F 
Sbjct: 119 IWLKMDTGMHRVGVHPKDYQDAYQRLLASGKVSRIVLMSHFARADELDAAATEQQVAVFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
                    E SL +S  +L  P+      RPGI LYG T       ++  +Q V+T ++
Sbjct: 179 AARQGLSA-ECSLRNSPAVLGWPSIKSDWVRPGIMLYGATPFEVAQAEAARLQPVMTLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII +R+  AGE V YG +    R + + V A+GYADGYP                G   
Sbjct: 238 RIISVRELPAGEPVGYGAKFISPRPTRVGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T+     VG  ++++G  +   DVA+ +GT  Y +   
Sbjct: 287 VVAGKRTQLIGRVSMDMLCVDLTEVPEATVGSPVELWGKQVLASDVAMQAGTIPYQIFCN 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 L-KRVP 351


>gi|157803277|ref|YP_001491826.1| alanine racemase [Rickettsia canadensis str. McKiel]
 gi|166969427|sp|A8EXF8|ALR_RICCK RecName: Full=Alanine racemase
 gi|157784540|gb|ABV73041.1| alanine racemase [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 128/364 (35%), Positives = 187/364 (51%), Gaps = 21/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L+A+KNN+  +  +   +   AVVK + YGLG  +I+ AL     + FFV S EEGV 
Sbjct: 8   INLSAIKNNYFLLQDICKTSLVGAVVKADGYGLGAVQISKALIEENCRHFFVASSEEGVN 67

Query: 71  LRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYALQV 128
           +R        I VL G+       + + NLIP+++++ Q+  + +      +  P  L  
Sbjct: 68  VRKALGIDVNILVLNGVFEHDALELIEYNLIPILNNLKQIEIWQQFGNLKNLLLPCYLHF 127

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NRLGLS  E     +N    K   L  IISHLA +++  +  N  QL +F+  + +
Sbjct: 128 NTGINRLGLSSNEIEQLINNRDLLKGLNLQYIISHLAISEEIDNPYNLEQLNKFKAYLRY 187

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +  I+ASLA+S GI LG +YHF L RPG +LYG          MQ  VT +A II ++  
Sbjct: 188 FPSIKASLANSGGIFLGQDYHFDLVRPGAALYGLNPL------MQNPVTLKAPIIHLQNL 241

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
                + Y       RDS+IA   +GYADGY    S             GK FI G  VP
Sbjct: 242 TLDSHIGYNMTFTTKRDSVIATLPLGYADGYSRNFSNQ-----------GKVFINGRSVP 290

Query: 309 ILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           I+G+++MD+   D+TD     I +G  ++I G     D +A   GT  Y++L  +G RY 
Sbjct: 291 IVGRVSMDLINIDVTDLPPSDIFLGQEVEIIGNHCTPDKIASIIGTIGYEVLTSLGNRYR 350

Query: 367 KFYT 370
           + YT
Sbjct: 351 RKYT 354


>gi|330004917|ref|ZP_08305062.1| alanine racemase [Klebsiella sp. MS 92-3]
 gi|328536477|gb|EGF62821.1| alanine racemase [Klebsiella sp. MS 92-3]
          Length = 359

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +        K    Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGKDFGCQPVMTLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|294624631|ref|ZP_06703303.1| alanine racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292601066|gb|EFF45131.1| alanine racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 366

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIGAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQHTAHTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVGALAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|1942328|pdb|1SFT|A Chain A, Alanine Racemase
 gi|1942329|pdb|1SFT|B Chain B, Alanine Racemase
 gi|3891941|pdb|1BD0|A Chain A, Alanine Racemase Complexed With Alanine Phosphonate
 gi|3891942|pdb|1BD0|B Chain B, Alanine Racemase Complexed With Alanine Phosphonate
          Length = 388

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 65  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 185 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 296 ---HVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|2506170|sp|P10724|ALR_BACST RecName: Full=Alanine racemase
          Length = 388

 Score =  292 bits (748), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 65  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 185 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 296 ---HVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|288962767|ref|YP_003453061.1| alanine racemase [Azospirillum sp. B510]
 gi|288915033|dbj|BAI76517.1| alanine racemase [Azospirillum sp. B510]
          Length = 375

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 125/368 (33%), Positives = 189/368 (51%), Gaps = 18/368 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +      A  +AVVK +AYGLG  ++ PAL  AG + F V   EE 
Sbjct: 16  LTVDLGAVVANWAQLRDRVAPAECSAVVKADAYGLGVARVVPALAAAGCRTFVVAQFEEA 75

Query: 69  VKLRLYT----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           + +R       PQA++F L G+ PG E       ++PV++ +  +  + +   S G   P
Sbjct: 76  LAVRRALEPVAPQAQVFSLGGMPPGCEGEFLANRILPVLNHLSGIASWRAFAASRGEVLP 135

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             + +DTG NRLGL   E  D   +    +   +   ++HLACA+D  + +N  QL+RFR
Sbjct: 136 AVVHIDTGMNRLGLGPDELDDLAAHPEWLEGIDVRYWMTHLACAEDFDNPMNGEQLDRFR 195

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
             ++     +AS A+SSGI  G +YHF L RPG +LYG        +PM+  V  +AR++
Sbjct: 196 DALARLPKAKASFANSSGIFHGKDYHFDLARPGCALYGVNPTPRLPNPMRGTVRLDARLL 255

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R   +   V Y    K+T    IA   IGYADGY  +L G            G  F+ 
Sbjct: 256 QVRNCASPMTVGYAAAHKVTGPVRIATIGIGYADGYMRSLGG-----------KGHVFVD 304

Query: 304 GYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           G   PI+G+I+MD+   D+T         G  +++ GP+  +D VA  +GT  Y+++  +
Sbjct: 305 GVAAPIVGRISMDLITIDVTGLPESVAHAGRMVELIGPNRPVDRVAEEAGTIGYEIMTSL 364

Query: 362 GTRYAKFY 369
           G RY + Y
Sbjct: 365 GRRYHRVY 372


>gi|21244412|ref|NP_643994.1| alanine racemase [Xanthomonas axonopodis pv. citri str. 306]
 gi|23813646|sp|Q8PGD0|ALR_XANAC RecName: Full=Alanine racemase
 gi|21110074|gb|AAM38530.1| alanine racemase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 366

 Score =  292 bits (748), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKLDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+  AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P+ G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLAGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVGALAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|152989346|ref|YP_001350978.1| biosynthetic alanine racemase [Pseudomonas aeruginosa PA7]
 gi|150964504|gb|ABR86529.1| alanine racemase [Pseudomonas aeruginosa PA7]
          Length = 358

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N++     +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYNLAKRCAPQRQAFAVVKANAYGHGAREVVTALHDE-ADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +                
Sbjct: 61  LEEAAEVRALHADARILLLEGCFEASEYALAGQLRLDLVIQGLEQGEAFLAAGLDTPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N    +   +ISH ACAD+ +  +   Q+E F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRNHPGVRELNLISHFACADERNHPLTEQQVECFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   +       ++  ++  AR
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGATPFADLSAAELGLKPAMSLTAR 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG      R + I   + GYADGYP                G    
Sbjct: 240 LISVREVAAGESVGYGAGWVAERPTRIGTVSCGYADGYPRNA-----------PAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D+     + VGD ++++G  + +D+VA A G+  Y+LL ++
Sbjct: 289 VGGRRTRLAGRVSMDMLTVDLGGLPDVRVGDPVELWGAQLAVDEVACACGSIGYELLSKV 348

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 349 TARVPRRY 356


>gi|288941546|ref|YP_003443786.1| alanine racemase [Allochromatium vinosum DSM 180]
 gi|288896918|gb|ADC62754.1| alanine racemase [Allochromatium vinosum DSM 180]
          Length = 367

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 107/375 (28%), Positives = 167/375 (44%), Gaps = 20/375 (5%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            S   LR +I L A+++N+    +L+  +R  AVVK NAYG G   +A  L +     F 
Sbjct: 3   RSARPLRARIHLDAIRHNYRRAKSLAPRSRALAVVKANAYGHGAIAVARTLADE-ADGFA 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V  VEE ++LR    Q  + +L G+    E  + +   + ++    +   +         
Sbjct: 62  VACVEEALELRESGIQEPMLLLEGVFSPDEIALVERAGLAMVVHCREQLDWVLNAHPSRR 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++DTG +R+G SL E  +              + ++H A AD+      S Q+E 
Sbjct: 122 LDCWIKLDTGMHRVGFSLSEFAEVNARLAACPHVGERVAMTHFARADEIDHPYTSAQIEA 181

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV------ 235
           F   ++  + I  SLA+S+ +   P  H   TRPGI LYG +                  
Sbjct: 182 FEQALNGAR-IGRSLANSAAVFAWPQAHGDWTRPGIMLYGVSPFAGTGSNANMDAGDLRP 240

Query: 236 -VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T E+ +I +R   AGE V YGG+    R + + VAAIGYADGYP              
Sbjct: 241 AMTLESALIAVRDLDAGEPVGYGGRFVCERPTRVGVAAIGYADGYPRHA----------- 289

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
             G    + G +  ++G+++MDM   D+T       GD ++++G  +    VA AS T  
Sbjct: 290 RDGTPIAVGGRLTRLIGRVSMDMITLDLTGFDEARPGDPVELWGRTVPAGAVAEASDTIA 349

Query: 355 YDLLVRIGTRYAKFY 369
           Y L   IG R    Y
Sbjct: 350 YQLFTGIGRRVPLMY 364


>gi|328952024|ref|YP_004369358.1| Alanine racemase [Desulfobacca acetoxidans DSM 11109]
 gi|328452348|gb|AEB08177.1| Alanine racemase [Desulfobacca acetoxidans DSM 11109]
          Length = 399

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 24/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N  + L +DL AL+ N+  +    G   +  AV+K +AYG G   +A  L  AG   F V
Sbjct: 29  NRMVELTVDLAALQYNFRQLRQYCGQKVKILAVIKADAYGHGLLPVAQVLAPAGADYFGV 88

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVS 121
               EGV LR       I +L G+ P +       +L   +          ++       
Sbjct: 89  AYCSEGVSLRQAGITLPILLLMGVLPEEAAEAVAHDLEVTLFCREMAAALAAQARQQSKK 148

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++DTG  RLGL   E + F  +       +L+ +ISH A +D         QL  
Sbjct: 149 VKVHVKIDTGMGRLGLLPTELMPFLESLGEFPELELAGLISHFAASDCCDRSYTHQQLAD 208

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQT 234
           F  L+   +G         +A+S+ +L     H  + R GI+LYG    +      P++ 
Sbjct: 209 FERLLKGVRGRGWAVPASHIANSAAVLHVHQAHLNMVRAGITLYGSPPSLETPSPIPLKP 268

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++   R++ +++   G  +SYG      + SLIA   +GY +GY   +S          
Sbjct: 269 VMSLRTRVLQLQELPPGCSISYGRTYFTDKPSLIAALPVGYCNGYSRLMSNR-------- 320

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   + G   PI G++ M++TM D+T+   ++ GD   + G D    +  DD+A  +
Sbjct: 321 ---GCVLLHGQRAPIRGRVCMNLTMVDVTEIPGVKKGDMATLLGEDGSDRLTGDDLAAWA 377

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++   +G    + Y
Sbjct: 378 ETISYEIYCMMGNSNYRRY 396


>gi|4558012|pdb|2SFP|A Chain A, Alanine Racemase With Bound Propionate Inhibitor
 gi|4558013|pdb|2SFP|B Chain B, Alanine Racemase With Bound Propionate Inhibitor
 gi|21465981|pdb|1L6F|A Chain A, Alanine Racemase Bound With N-(5'-Phosphopyridoxyl)-L-
           Alanine
 gi|21465982|pdb|1L6F|B Chain B, Alanine Racemase Bound With N-(5'-Phosphopyridoxyl)-L-
           Alanine
 gi|21465983|pdb|1L6G|A Chain A, Alanine Racemase Bound With N-(5'-Phosphopyridoxyl)-D-
           Alanine
 gi|21465984|pdb|1L6G|B Chain B, Alanine Racemase Bound With N-(5'-Phosphopyridoxyl)-D-
           Alanine
 gi|37926920|pdb|1NIU|A Chain A, Alanine Racemase With Bound Inhibitor Derived From L-
           Cycloserine
 gi|37926921|pdb|1NIU|B Chain B, Alanine Racemase With Bound Inhibitor Derived From L-
           Cycloserine
          Length = 388

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 152/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 65  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L +DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLXMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 185 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 296 ---HVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|289665503|ref|ZP_06487084.1| alanine racemase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 366

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLEALRHNYRLAKQL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG          +  ++ V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFRQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGKVCPLIGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVSPLAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|206975085|ref|ZP_03235999.1| alanine racemase [Bacillus cereus H3081.97]
 gi|217959579|ref|YP_002338131.1| alanine racemase [Bacillus cereus AH187]
 gi|222095721|ref|YP_002529778.1| alanine racemase [Bacillus cereus Q1]
 gi|206746506|gb|EDZ57899.1| alanine racemase [Bacillus cereus H3081.97]
 gi|217065584|gb|ACJ79834.1| alanine racemase [Bacillus cereus AH187]
 gi|221239779|gb|ACM12489.1| alanine racemase [Bacillus cereus Q1]
          Length = 391

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|158321297|ref|YP_001513804.1| alanine racemase [Alkaliphilus oremlandii OhILAs]
 gi|158141496|gb|ABW19808.1| alanine racemase [Alkaliphilus oremlandii OhILAs]
          Length = 390

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 101/380 (26%), Positives = 162/380 (42%), Gaps = 27/380 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +I+L  LK+N H++  +   +    AV+K + YG G  +IA  L   G     V 
Sbjct: 8   RPVWAEINLDHLKHNIHAIKNIVKKDTIVCAVIKADGYGHGAAEIAKTLLENGADRIAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           ++ E V LR    +  I VL      Q ++I D N+   + S  Q   +S          
Sbjct: 68  TLSEAVALRKSGYEVPIMVLGYTPEHQGELILDNNITQTVYSYDQALEFSNAAKQKNQKM 127

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++DTG +RLG    +EA+      FN     +  I +H A ADD        Q   
Sbjct: 128 TLHLKIDTGMSRLGFQPNEEAIHDIKKIFNLPNLTIEGIFTHFAAADDRDKAYTYQQFHT 187

Query: 182 FRTLI----SHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           F   +         I     S+S  ++  P  +  + RPGI LYG     +         
Sbjct: 188 FMDFVKKLEQEGCPIPIKHVSNSAAIMDLPEMNLDMVRPGIILYGLYPSDDVDKSRIELK 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A+I  ++       +SYG +   + D  I    IGYADGY   +SG        
Sbjct: 248 QVMELKAKISHVKTLTKDRGISYGLKYTTSGDEKIITMPIGYADGYTRMMSG-------- 299

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  +KG  +P++G+I MD  M + T    +E GD + ++  D    + +DD+A  
Sbjct: 300 ---KAEAIVKGNKIPLVGRICMDQCMANATGL-DVEPGDEVTLYSNDRESGLSIDDIANK 355

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY+++  +G R  + Y
Sbjct: 356 LGTINYEIVCMLGKRVPRVY 375


>gi|39936148|ref|NP_948424.1| alanine racemase [Rhodopseudomonas palustris CGA009]
 gi|39650003|emb|CAE28526.1| putative alanine racemase [Rhodopseudomonas palustris CGA009]
          Length = 413

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 129/364 (35%), Positives = 179/364 (49%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  +  A VVK +AYG G   +  AL  AG + FFV ++ E 
Sbjct: 36  LTIDLDALVANWRKLEKTAIPSECAGVVKGDAYGCGAGPVTKALLAAGCKTFFVATLSEA 95

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
           + +R   P A ++VL G  P         N  PVI  + +L  +       G     AL 
Sbjct: 96  LVVREAAPNATLYVLDGFFPNSGDEFAKLNCQPVIGDLYELAEWDVFCRRTGWRGGAALH 155

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +RLGL++ EA              ++L+ISHLACAD  +  +N+ Q   FR +  
Sbjct: 156 IDTGMSRLGLTIVEAQGIVPRIVA-GDHGITLVISHLACADLVNHQLNAKQAAAFREIAG 214

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSGI LG  + F L RPG +LYG        +PMQ VV  +ARI+ +R 
Sbjct: 215 QFTGVSASLSASSGIFLGSQFAFDLVRPGAALYGINPTPEADNPMQPVVDLKARIVQVRS 274

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YG      R S IAV + GYADGY       D         G    I G   
Sbjct: 275 VERGDTVGYGATWSARRPSKIAVVSAGYADGYFRAAGSSDGTR------GADVIIAGQRC 328

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI G+I+MD+   DITD    +   G    + G  I +D++    GT  Y++L  +G RY
Sbjct: 329 PIAGRISMDLLAVDITDLPANAARRGMMATLIGDGITVDELGHHFGTIGYEVLTSLGRRY 388

Query: 366 AKFY 369
            + Y
Sbjct: 389 TRIY 392


>gi|218692336|ref|YP_002400548.1| alanine racemase [Escherichia coli ED1a]
 gi|331660619|ref|ZP_08361551.1| alanine racemase [Escherichia coli TA206]
 gi|218429900|emb|CAR10727.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           ED1a]
 gi|331051661|gb|EGI23700.1| alanine racemase [Escherichia coli TA206]
          Length = 359

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLNEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|261418553|ref|YP_003252235.1| alanine racemase [Geobacillus sp. Y412MC61]
 gi|319765367|ref|YP_004130868.1| alanine racemase [Geobacillus sp. Y412MC52]
 gi|261375010|gb|ACX77753.1| alanine racemase [Geobacillus sp. Y412MC61]
 gi|317110233|gb|ADU92725.1| alanine racemase [Geobacillus sp. Y412MC52]
          Length = 384

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 156/378 (41%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++IDL A+ +N  ++   L G  +  AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWVEIDLDAIYDNVANLRRFLPGGTQIMAVVKANAYGHGDAQVAATALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR     A I VL    P    +  +  +   +     L   S L +     
Sbjct: 65  AFLDEALALRKKGIDAPILVLGASRPEDVALAAEHRIALTVFRSDWLEKASSLYNGSTPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLKMDTGMGRLGVKDEEETKRIAALIDRHPPFVLEGVYTHFATADEVNTDYFSYQYAR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L   +  F + R GIS+YG     +      + ++  
Sbjct: 185 FLHMLDWLPSRPPLVHCANSAAALRFSDRAFNMVRFGISMYGLAPSPDIKPLLPYELKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  + + L +  G  + + G      I +DDVA   G
Sbjct: 296 ---HVLVGGQRAPIVGRICMDQCMIRLPEPLPV--GTKVTLIGRQGDEVISIDDVARHLG 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|332288773|ref|YP_004419625.1| alanine racemase [Gallibacterium anatis UMN179]
 gi|330431669|gb|AEC16728.1| alanine racemase [Gallibacterium anatis UMN179]
          Length = 357

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 15/361 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
              KI   ALK+N   +++L+ N++  AVVK NAYG G E ++  + +  V  F V  + 
Sbjct: 4   ATAKISSLALKHNIEKIHSLAPNSKIIAVVKANAYGHGVEFVSQTVQDN-VDCFGVARLG 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +  I   N +  +    +                 +
Sbjct: 63  EALRLRSNGITKPILLLEGFFSASDLPILSVNNLETVVHCDEQLEALLAAKLPNPINVWI 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG +RLG+ L E   +       +       ISH + AD+  S     QL+RF T  
Sbjct: 123 KIDTGMHRLGVQLDEVDRYYQALSASQNVNQIRFISHFSRADELDSDYTLKQLDRFLTAC 182

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARIIL 244
           +   G E S+A+S GIL   + H    RPGI +YG +     + ++ +  V+T  + +I 
Sbjct: 183 AGKVG-EKSIAASGGILFWKDSHLDWIRPGIIMYGISANSTPSSAYDLIPVMTLTSSLIA 241

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R    GE V YGG+    +D+ I V AIGY DGYP             V  G   +I G
Sbjct: 242 VRNHKKGEPVGYGGRWVSEKDTKIGVVAIGYGDGYPR-----------DVPTGTPVYING 290

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             VPI+GK++MDM   D+      +VGD + ++G ++ ++++A   G  +Y+L+ ++  R
Sbjct: 291 RRVPIVGKVSMDMLTVDLGADAQDKVGDEVILWGKELPIEEIAEIIGVISYELVTKLTPR 350

Query: 365 Y 365
            
Sbjct: 351 V 351


>gi|218707674|ref|YP_002415193.1| alanine racemase [Escherichia coli UMN026]
 gi|293402691|ref|ZP_06646788.1| alanine racemase [Escherichia coli FVEC1412]
 gi|293407785|ref|ZP_06651625.1| alanine racemase [Escherichia coli B354]
 gi|298378219|ref|ZP_06988103.1| alanine racemase [Escherichia coli FVEC1302]
 gi|300899831|ref|ZP_07118045.1| alanine racemase [Escherichia coli MS 198-1]
 gi|218434771|emb|CAR15704.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           UMN026]
 gi|284924146|emb|CBG37245.1| alanine racemase [Escherichia coli 042]
 gi|291429606|gb|EFF02620.1| alanine racemase [Escherichia coli FVEC1412]
 gi|291472036|gb|EFF14518.1| alanine racemase [Escherichia coli B354]
 gi|298280553|gb|EFI22054.1| alanine racemase [Escherichia coli FVEC1302]
 gi|300356602|gb|EFJ72472.1| alanine racemase [Escherichia coli MS 198-1]
          Length = 359

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCDATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|196039765|ref|ZP_03107069.1| alanine racemase [Bacillus cereus NVH0597-99]
 gi|196029468|gb|EDX68071.1| alanine racemase [Bacillus cereus NVH0597-99]
          Length = 391

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|170769516|ref|ZP_02903969.1| alanine racemase [Escherichia albertii TW07627]
 gi|170121573|gb|EDS90504.1| alanine racemase [Escherichia albertii TW07627]
          Length = 359

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +           +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEADLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHFARADEPTCGATEKQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQSQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|157691230|ref|YP_001485692.1| alanine racemase [Bacillus pumilus SAFR-032]
 gi|157679988|gb|ABV61132.1| alanine racemase [Bacillus pumilus SAFR-032]
          Length = 392

 Score =  292 bits (747), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 105/386 (27%), Positives = 174/386 (45%), Gaps = 31/386 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +N F R    +I+L+A+K+N   M    G + +  AVVK NAYG G  ++A A   AG
Sbjct: 1   MDTNAFYRDTWAEINLSAIKHNVSHMKDHIGQSVQLMAVVKANAYGHGDIEVASAALKAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E V LR    +A I VL  +     K+    N+I    S+  L     +M
Sbjct: 61  ADILAVAFLDEAVSLRNKGIKAPILVLGAVPTEYVKVAVRYNVIMTAYSIDWLKDVINMM 120

Query: 117 --SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSH 173
               G    + L++D+G NRLG+   E ++      ++    QL  + +H A AD+    
Sbjct: 121 EGQMGQPIRFHLKIDSGMNRLGVKTIEQVNEVKKLVDEHSYLQLEGVFTHFATADEKDEA 180

Query: 174 VNSVQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----N 227
               Q++ F+TL+   H   +    A+S+  L   +  F + R GIS+YG +        
Sbjct: 181 YFDRQVDTFQTLLEPLHTDKLLIHCANSAAGLRFKDVLFNMVRFGISMYGLSPSEEIKDE 240

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++  ++   ++  ++    GE VSYG      +D+ I    +GYADG+   L    
Sbjct: 241 LPFKLEEAMSLHTKLAHVKHIQKGESVSYGATYTANQDTWIGTVPVGYADGWIRKL---- 296

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                    G +  + G    I G+I MD  M ++ D L +  G+ + + G      I++
Sbjct: 297 --------AGTEVLVGGKRRKITGRICMDQFMVELKDKLPV--GEPVVLIGKQGEDMIQV 346

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           D++A    T NY++   IG R  + Y
Sbjct: 347 DEIAKRLETINYEITCSIGHRVPRVY 372


>gi|153816433|ref|ZP_01969101.1| hypothetical protein RUMTOR_02686 [Ruminococcus torques ATCC 27756]
 gi|145846221|gb|EDK23139.1| hypothetical protein RUMTOR_02686 [Ruminococcus torques ATCC 27756]
          Length = 408

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 27/386 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M  +  +  +IDL A+  N   M   +   AR  AV+K + YG G   IA      + V 
Sbjct: 26  MDQHNRVCAQIDLDAIAYNMEQMKDQIGKEARLIAVIKTDGYGHGAVPIARMFETFSYVW 85

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            + V  +EE V LR    +  I VL  + P Q + +    +   + +       S     
Sbjct: 86  GYAVACIEEAVSLRKEGIKKPILVLGCVFPDQYETMIKNEIRAAVYTKEMAEGMSDEAVR 145

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +  + +++DTG  R+G  +  E+++            +  + +H A AD+       
Sbjct: 146 QGKNAYFHIKIDTGMGRIGFPVNSESVNLIEEISKLPNIHMEGLFTHFAKADEKEKSYTL 205

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q ERF  +    +            +S+GI+  PN    L R GIS YG          
Sbjct: 206 KQHERFLWMKEQLEKRNVDITYYDCDNSAGIIDFPNLKHDLARAGISTYGMYPSDEVQKS 265

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++  ++  + I  +++  AG  +SYGG         IA   +GY DGYP +LS    
Sbjct: 266 NVHLKPALSLISHITFVKEVEAGTPISYGGTFVAPEKMKIATIPVGYGDGYPRSLSN--- 322

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   I+G    I+G++ MD  M D+TD       D + + G     +I ++
Sbjct: 323 --------KGSVLIRGKRAKIVGRVCMDQFMVDVTDIPGAAFMDRVVLIGKDGKDEITVE 374

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +++  SG  NY+ +  +G R  + YT
Sbjct: 375 ELSKLSGRFNYEFVCCLGKRIPRVYT 400


>gi|52143353|ref|YP_083477.1| alanine racemase [Bacillus cereus E33L]
 gi|51976822|gb|AAU18372.1| alanine racemase [Bacillus cereus E33L]
          Length = 391

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAVAEEAIQYDVMMTVYRSEDLQGINEIAKRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|192291866|ref|YP_001992471.1| alanine racemase [Rhodopseudomonas palustris TIE-1]
 gi|192285615|gb|ACF01996.1| alanine racemase [Rhodopseudomonas palustris TIE-1]
          Length = 413

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 179/364 (49%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  +  A VVK +AYG G   +  AL  AG + FFV ++ E 
Sbjct: 36  LTIDLDALVANWRKLEKTAIPSECAGVVKGDAYGCGAGPVTKALLAAGCKTFFVATLSEA 95

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R   P A ++VL G  P         N  PVI  + +L  +       G     AL 
Sbjct: 96  RVVREAAPNATLYVLDGFFPNSGDEFAKLNCQPVIGDLYELAEWDVFCRRTGWRGGAALH 155

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +RLGL++ EA              ++L+ISHLACAD  +  +N+ Q   FR +  
Sbjct: 156 IDTGMSRLGLTIVEAQGIVPRIVA-GDHGITLVISHLACADLVNHQLNAKQAAAFREIAG 214

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSGI LGP + F L RPG +LYG        +PMQ VV  +ARI+ +R 
Sbjct: 215 QFTGVSASLSASSGIFLGPQFAFDLVRPGAALYGINPTPEADNPMQPVVDLKARIVQVRS 274

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YG      R S IAV + GYADGY       D         G    I G   
Sbjct: 275 VERGDTVGYGATWSARRPSKIAVVSAGYADGYFRAAGSSDGTR------GADVIIAGQRC 328

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI G+I+MD+   DITD    +   G    + G  I +D++    GT  Y++L  +G RY
Sbjct: 329 PIAGRISMDLLAVDITDLPANAARRGMMATLIGDGITVDELGHHFGTIGYEVLTSLGRRY 388

Query: 366 AKFY 369
            + Y
Sbjct: 389 TRIY 392


>gi|152972916|ref|YP_001338062.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150957765|gb|ABR79795.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 359

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +        +    Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGRDFGCQPVMTLSSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|167013239|pdb|2ODO|A Chain A, Crystal Structure Of Pseudomonas Fluorescens Alanine
           Racemase
 gi|167013240|pdb|2ODO|B Chain B, Crystal Structure Of Pseudomonas Fluorescens Alanine
           Racemase
 gi|167013241|pdb|2ODO|C Chain C, Crystal Structure Of Pseudomonas Fluorescens Alanine
           Racemase
 gi|167013242|pdb|2ODO|D Chain D, Crystal Structure Of Pseudomonas Fluorescens Alanine
           Racemase
          Length = 357

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 166/370 (44%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     ++G A+  AV+  +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYQLAREVTG-AKALAVIXADAYGHGAVRCAQALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A I +L G     E  +I + +   V+ S+ QL    +         
Sbjct: 60  IEEALELRAAGIRAPILLLEGFFEADELPLIVEHDFWCVVHSLWQLDAIEQ-ARLAKPIH 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L +D+G +R+GL   +                 +++SH A AD+     +  Q+  F 
Sbjct: 119 VWLXLDSGMHRVGLHPNDYKAAYQRLQASANVAKIVLMSHFARADELDCTRSVEQVAVFL 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
              +     E SL +S  +L  P       RPG+ LYG +           +Q V+T E+
Sbjct: 179 GARADLTA-EISLRNSPAVLGWPRVPSDWVRPGLMLYGSSPFDEPQATASRLQPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG +    +   I V A+GYADGYP                G   
Sbjct: 238 KVICVRELPAGEPVGYGARFITPKPMRIGVVAMGYADGYPRQA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           F+ G    +LG+++MDM   D+TD     +G  ++++G +I   +VA A+ T  Y +   
Sbjct: 287 FVDGVRSQLLGRVSMDMLCIDLTDVPQAGLGSTVELWGKNILASEVATAADTIPYQIFCN 346

Query: 361 IGTRYAKFYT 370
           +  R  + Y+
Sbjct: 347 L-KRVPRLYS 355


>gi|301021579|ref|ZP_07185579.1| alanine racemase [Escherichia coli MS 69-1]
 gi|300397977|gb|EFJ81515.1| alanine racemase [Escherichia coli MS 69-1]
          Length = 359

 Score =  291 bits (746), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAETFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWGSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|237728136|ref|ZP_04558617.1| alanine racemase 1 [Citrobacter sp. 30_2]
 gi|226910147|gb|EEH96065.1| alanine racemase 1 [Citrobacter sp. 30_2]
          Length = 359

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDASDLPTISAQRLHTAVHNQEQLEALEAAKLAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    +  + + Q   I+SH A AD+P       QL+ F + 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLTQCENVRQPVNIVSHFARADEPECGATEKQLDIFNSF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPG+ LYG +      I      Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWARPGLILYGVSPLENHSIGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG  +  RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWQSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPEAQDKAGDSVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|182419267|ref|ZP_02950520.1| alanine racemase [Clostridium butyricum 5521]
 gi|237667853|ref|ZP_04527837.1| alanine racemase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376907|gb|EDT74478.1| alanine racemase [Clostridium butyricum 5521]
 gi|237656201|gb|EEP53757.1| alanine racemase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 388

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 160/381 (41%), Gaps = 27/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL  N  ++ +L+ +    AVVK + YG G    AP L   G     V  
Sbjct: 6   RPVWAEIDLDALAYNMKNIKSLAEDKEVIAVVKADCYGHGAIDTAPVLLENGASRLAVAV 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + EG++LR     A I +L        + +   ++   + S+      SK   S      
Sbjct: 66  LTEGIELRKAKITAPIMILGYTPEYLGEELITYDIEQTVYSLEYAQNLSKTALSLNKKAK 125

Query: 124 YALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G    E  L       +     +  + +H + AD+ +      Q +++
Sbjct: 126 IHIALDTGMGRIGFMPNETSLKEVSEICSLPGLDVIGMFTHFSTADEENKDYTLEQFDKY 185

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYH--FQLTRPGISLYGGTDKIN---KSHPM 232
              +     +        +++S  I+  P         R GI LYG         ++  +
Sbjct: 186 MNFLHELSKLNISIPLKHVSNSGAIMDMPETFKDLDAVRAGIILYGYYPSHEVKKENLSL 245

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T +A++  +++      +SYG   K  R S+IA   IGYADGY   L         
Sbjct: 246 KPALTIKAKVAHVKEMDENMYISYGRTFKTKRKSIIATIPIGYADGYSRLL--------- 296

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
               G K  + G +VPI+G+I MD  M D+TD+ +++ GD + I G      I  DD A 
Sbjct: 297 --IPGAKVIVNGKLVPIVGRICMDQCMIDVTDAGTVKTGDEVIILGQFENLKINADDYAQ 354

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L     R  K Y
Sbjct: 355 ILGTINYEVLCMFKHRIPKVY 375


>gi|317500186|ref|ZP_07958418.1| alanine racemase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|316898401|gb|EFV20440.1| alanine racemase [Lachnospiraceae bacterium 8_1_57FAA]
          Length = 399

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 27/386 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M  +  +  +IDL A+  N   M   +   AR  AV+K + YG G   IA      + V 
Sbjct: 17  MDQHNRVCAQIDLDAIAYNMEQMKDQIGKEARLIAVIKTDGYGHGAVPIARMFETFSYVW 76

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            + V  +EE V LR    +  I VL  + P Q + +    +   + +       S     
Sbjct: 77  GYAVACIEEAVSLRKEGIKKPILVLGCVFPDQYETMIKNEIRAAVYTKEMAEGMSDEAVR 136

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +  + +++DTG  R+G  +  E+++            +  + +H A AD+       
Sbjct: 137 QGKNAYFHIKIDTGMGRIGFPVNSESVNLIEEISKLPNIHMEGLFTHFAKADEKEKSYTL 196

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q ERF  +    +            +S+GI+  PN    L R GIS YG          
Sbjct: 197 KQHERFLWMKEQLEKRNVDITYYDCDNSAGIIDFPNLKHDLARAGISTYGMYPSDEVQKS 256

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++  ++  + I  +++  AG  +SYGG         IA   +GY DGYP +LS    
Sbjct: 257 NVHLKPALSLISHITFVKEVEAGTPISYGGTFVAPEKMKIATIPVGYGDGYPRSLSN--- 313

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   I+G    I+G++ MD  M D+TD       D + + G     +I ++
Sbjct: 314 --------KGSVLIRGKRAKIVGRVCMDQFMVDVTDIPGAAFMDRVVLIGKDGKDEITVE 365

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +++  SG  NY+ +  +G R  + YT
Sbjct: 366 ELSKLSGRFNYEFVCCLGKRIPRVYT 391


>gi|296272487|ref|YP_003655118.1| alanine racemase [Arcobacter nitrofigilis DSM 7299]
 gi|296096661|gb|ADG92611.1| alanine racemase [Arcobacter nitrofigilis DSM 7299]
          Length = 399

 Score =  291 bits (746), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +  +  +I+L  L +N      ++  +++  AV+K + YG G   IA  L   G   
Sbjct: 1   MDLSRAVWTEINLDNLAHNMRETRRITNIDSKITAVIKADGYGHGAVAIAKTLLENGADR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V ++ E + LR       I VL        K I + N+I  I ++ Q   +S++    
Sbjct: 61  FAVATLSEALLLRNSFSDVEILVLGYTPEHLAKDIIENNIIQTIYTLKQAKEFSRVAISL 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
             +    +++DTG +RLG+   +E ++   +    +   +  I +H A AD+        
Sbjct: 121 NKNLVVHIKLDTGMHRLGMPFSEETIETILDISKHEGLFIEGIFTHFAIADNIDKKYTKQ 180

Query: 178 QLERFRTLIS----HYKGIEA-SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q+E+F  +++        I    +++S+ I+  P ++F + R GI LYG     + +H +
Sbjct: 181 QVEKFTFIVNSLEEKGLNIPIKHVSNSAAIIDLPEFNFDMVRAGIMLYGLYPSKDVNHNL 240

Query: 233 QT---VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                V+  +A I  +++  A   VSYG   K  + S +A   IGYADGY   LSG    
Sbjct: 241 INLKEVMCLKANISQVKELEANCGVSYGLTYKCEKKSKVATLPIGYADGYTRMLSG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDD 345
                    K  +    VP++G I MD  + D+T    + +GD + +FG +      +DD
Sbjct: 297 -------KAKVLVNNTKVPVIGSICMDQCIIDVTGL-DVNMGDEVILFGGNNPNAIAIDD 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           ++    T NY+++  I  R  + Y
Sbjct: 349 ISNLLNTINYEIVCMIDKRVPRVY 372


>gi|283787218|ref|YP_003367083.1| alanine racemase [Citrobacter rodentium ICC168]
 gi|282950672|emb|CBG90346.1| alanine racemase [Citrobacter rodentium ICC168]
          Length = 359

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRQLAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G     +        +       +     +  S        +
Sbjct: 62  EALRLRAGGITQPVLLLEGFFEASDLPTISAQHLHTAVHNEEQLAALESASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    +  K + Q   IISH A AD+P S     QL  F T 
Sbjct: 122 KLDTGMHRLGVLPEQAEAFYQRLTKCKNVRQPVNIISHFARADEPESGATEKQLNIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL    HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWSQSHFNWARPGIILYGVSPLENRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG  +  RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWQSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPEAQDKAGDPVILWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|161505290|ref|YP_001572402.1| alanine racemase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160866637|gb|ABX23260.1| hypothetical protein SARI_03431 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 359

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLREGGITQPILLLEGFFDAADLPTISAQRLHTAVHNQEQLTALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QLE F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLEIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CQDKAG-KRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I  R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAARDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +   + GD + ++G D+ ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDKAGDPVVLWGEDLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMEY 357


>gi|331665722|ref|ZP_08366616.1| alanine racemase [Escherichia coli TA143]
 gi|331056773|gb|EGI28767.1| alanine racemase [Escherichia coli TA143]
          Length = 359

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCDATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKLG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|238892526|ref|YP_002917260.1| alanine racemase [Klebsiella pneumoniae NTUH-K2044]
 gi|238544842|dbj|BAH61193.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +        +    Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGRDFGCQPVMTLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|146305288|ref|YP_001185753.1| alanine racemase [Pseudomonas mendocina ymp]
 gi|145573489|gb|ABP83021.1| alanine racemase [Pseudomonas mendocina ymp]
          Length = 362

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 166/373 (44%), Gaps = 23/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     LSG AR  AVVK +AYG G  + A AL +     F V  
Sbjct: 2   RPARALIDLDALRHNYQLARELSG-ARALAVVKADAYGHGAVRCAQALQSE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +A I +L G     E  + D + +  +          +          
Sbjct: 60  IEEALALREAGIRAPILLLEGFFEADELALIDQHELWCVVHAQWQIEAIEQARLSRPLTL 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+GL   E  +              +++SH A AD+P       QL  F+ 
Sbjct: 120 WLKLDSGMHRVGLHPAEYQEAYRRLLASGKVGKIVLMSHFARADEPECERTVEQLAVFQQ 179

Query: 185 LISHYKGIEASLASSSGILLGPNYH-----FQLTRPGISLYGGTDKI---NKSHPMQTVV 236
                   E SL +S  +L  P            RPGI LYG T       ++  +Q V+
Sbjct: 180 -ARQGLAAEVSLCNSPAVLGWPQLFEKTGASDWVRPGIMLYGATPFEQAQEQAARLQPVM 238

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+++I +R+  AGE V YG +    R + + V AIGYADGYP                
Sbjct: 239 TLESKVISVRELPAGEPVGYGARFVSERPTRVGVVAIGYADGYPRHA-----------PT 287

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G +  ++G+++MDM   D+TD     +G  ++++G  +   DVA+A+G+  Y 
Sbjct: 288 GTPVAVDGQLTRLIGRVSMDMLTVDLTDLPQAGLGSRVELWGKQVLASDVAMAAGSIPYQ 347

Query: 357 LLVRIGTRYAKFY 369
           +   +  R    Y
Sbjct: 348 IFCNL-RRAPLLY 359


>gi|331655873|ref|ZP_08356861.1| alanine racemase [Escherichia coli M718]
 gi|331046227|gb|EGI18317.1| alanine racemase [Escherichia coli M718]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGSTEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|206581084|ref|YP_002241006.1| alanine racemase [Klebsiella pneumoniae 342]
 gi|290512391|ref|ZP_06551758.1| alanine racemase [Klebsiella sp. 1_1_55]
 gi|206570142|gb|ACI11918.1| alanine racemase [Klebsiella pneumoniae 342]
 gi|289775386|gb|EFD83387.1| alanine racemase [Klebsiella sp. 1_1_55]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRDLAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +        K    Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGKDFGCQPVMTLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|60594046|pdb|1XQK|A Chain A, Effect Of A Y265f Mutant On The Transamination Based
           Cycloserine Inactivation Of Alanine Racemase
 gi|60594047|pdb|1XQK|B Chain B, Effect Of A Y265f Mutant On The Transamination Based
           Cycloserine Inactivation Of Alanine Racemase
 gi|60594048|pdb|1XQL|A Chain A, Effect Of A Y265f Mutant On The Transamination Based
           Cycloserine Inactivation Of Alanine Racemase
 gi|60594049|pdb|1XQL|B Chain B, Effect Of A Y265f Mutant On The Transamination Based
           Cycloserine Inactivation Of Alanine Racemase
          Length = 388

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 152/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 65  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L +DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLXMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 185 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VS+G       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSFGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 296 ---HVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|15610559|ref|NP_217940.1| alanine racemase [Mycobacterium tuberculosis H37Rv]
 gi|15843019|ref|NP_338056.1| alanine racemase [Mycobacterium tuberculosis CDC1551]
 gi|31794604|ref|NP_857097.1| alanine racemase [Mycobacterium bovis AF2122/97]
 gi|121639348|ref|YP_979572.1| alanine racemase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663287|ref|YP_001284810.1| alanine racemase [Mycobacterium tuberculosis H37Ra]
 gi|148824630|ref|YP_001289384.1| alanine racemase [Mycobacterium tuberculosis F11]
 gi|167968690|ref|ZP_02550967.1| alanine racemase [Mycobacterium tuberculosis H37Ra]
 gi|215405459|ref|ZP_03417640.1| alanine racemase [Mycobacterium tuberculosis 02_1987]
 gi|215413331|ref|ZP_03422016.1| alanine racemase [Mycobacterium tuberculosis 94_M4241A]
 gi|215428925|ref|ZP_03426844.1| alanine racemase [Mycobacterium tuberculosis T92]
 gi|215432390|ref|ZP_03430309.1| alanine racemase [Mycobacterium tuberculosis EAS054]
 gi|215447752|ref|ZP_03434504.1| alanine racemase [Mycobacterium tuberculosis T85]
 gi|218755205|ref|ZP_03534001.1| alanine racemase [Mycobacterium tuberculosis GM 1503]
 gi|219559485|ref|ZP_03538561.1| alanine racemase [Mycobacterium tuberculosis T17]
 gi|224991844|ref|YP_002646533.1| putative alanine racemase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800470|ref|YP_003033471.1| alanine racemase alr [Mycobacterium tuberculosis KZN 1435]
 gi|254234024|ref|ZP_04927349.1| alanine racemase alr [Mycobacterium tuberculosis C]
 gi|254366033|ref|ZP_04982078.1| alanine racemase alr [Mycobacterium tuberculosis str. Haarlem]
 gi|260188477|ref|ZP_05765951.1| alanine racemase [Mycobacterium tuberculosis CPHL_A]
 gi|260202499|ref|ZP_05769990.1| alanine racemase [Mycobacterium tuberculosis T46]
 gi|260206790|ref|ZP_05774281.1| alanine racemase [Mycobacterium tuberculosis K85]
 gi|289444919|ref|ZP_06434663.1| alanine racemase [Mycobacterium tuberculosis T46]
 gi|289449122|ref|ZP_06438866.1| alanine racemase alr [Mycobacterium tuberculosis CPHL_A]
 gi|289555698|ref|ZP_06444908.1| alanine racemase alr [Mycobacterium tuberculosis KZN 605]
 gi|289571648|ref|ZP_06451875.1| alanine racemase alr [Mycobacterium tuberculosis T17]
 gi|289576156|ref|ZP_06456383.1| alanine racemase alr [Mycobacterium tuberculosis K85]
 gi|289747252|ref|ZP_06506630.1| alanine racemase alr [Mycobacterium tuberculosis 02_1987]
 gi|289752142|ref|ZP_06511520.1| alanine racemase alr [Mycobacterium tuberculosis T92]
 gi|289755553|ref|ZP_06514931.1| alanine racemase [Mycobacterium tuberculosis EAS054]
 gi|289759583|ref|ZP_06518961.1| alanine racemase alr [Mycobacterium tuberculosis T85]
 gi|289763606|ref|ZP_06522984.1| alanine racemase alr [Mycobacterium tuberculosis GM 1503]
 gi|294995803|ref|ZP_06801494.1| alanine racemase [Mycobacterium tuberculosis 210]
 gi|297636085|ref|ZP_06953865.1| alanine racemase [Mycobacterium tuberculosis KZN 4207]
 gi|297733085|ref|ZP_06962203.1| alanine racemase [Mycobacterium tuberculosis KZN R506]
 gi|298526906|ref|ZP_07014315.1| D-alanine racemase [Mycobacterium tuberculosis 94_M4241A]
 gi|313660416|ref|ZP_07817296.1| alanine racemase [Mycobacterium tuberculosis KZN V2475]
 gi|1449364|emb|CAB01033.1| ALANINE RACEMASE ALR [Mycobacterium tuberculosis H37Rv]
 gi|13883361|gb|AAK47870.1| D-alanine racemase [Mycobacterium tuberculosis CDC1551]
 gi|31620201|emb|CAD95644.1| PROBABLE ALANINE RACEMASE ALR [Mycobacterium bovis AF2122/97]
 gi|121494996|emb|CAL73482.1| Probable alanine racemase alr [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|124599553|gb|EAY58657.1| alanine racemase alr [Mycobacterium tuberculosis C]
 gi|134151546|gb|EBA43591.1| alanine racemase alr [Mycobacterium tuberculosis str. Haarlem]
 gi|148507439|gb|ABQ75248.1| alanine racemase [Mycobacterium tuberculosis H37Ra]
 gi|148723157|gb|ABR07782.1| alanine racemase alr [Mycobacterium tuberculosis F11]
 gi|224774959|dbj|BAH27765.1| putative alanine racemase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321973|gb|ACT26576.1| alanine racemase alr [Mycobacterium tuberculosis KZN 1435]
 gi|289417838|gb|EFD15078.1| alanine racemase [Mycobacterium tuberculosis T46]
 gi|289422080|gb|EFD19281.1| alanine racemase alr [Mycobacterium tuberculosis CPHL_A]
 gi|289440330|gb|EFD22823.1| alanine racemase alr [Mycobacterium tuberculosis KZN 605]
 gi|289540587|gb|EFD45165.1| alanine racemase alr [Mycobacterium tuberculosis K85]
 gi|289545402|gb|EFD49050.1| alanine racemase alr [Mycobacterium tuberculosis T17]
 gi|289687780|gb|EFD55268.1| alanine racemase alr [Mycobacterium tuberculosis 02_1987]
 gi|289692729|gb|EFD60158.1| alanine racemase alr [Mycobacterium tuberculosis T92]
 gi|289696140|gb|EFD63569.1| alanine racemase [Mycobacterium tuberculosis EAS054]
 gi|289711112|gb|EFD75128.1| alanine racemase alr [Mycobacterium tuberculosis GM 1503]
 gi|289715147|gb|EFD79159.1| alanine racemase alr [Mycobacterium tuberculosis T85]
 gi|298496700|gb|EFI31994.1| D-alanine racemase [Mycobacterium tuberculosis 94_M4241A]
 gi|323717910|gb|EGB27099.1| alanine racemase alr [Mycobacterium tuberculosis CDC1551A]
 gi|326905266|gb|EGE52199.1| alanine racemase alr [Mycobacterium tuberculosis W-148]
 gi|328460202|gb|AEB05625.1| alanine racemase alr [Mycobacterium tuberculosis KZN 4207]
          Length = 408

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +G+A+  AVVK + YG G  ++A     AG  +  V +V
Sbjct: 35  LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATV 94

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   +SS+ Q       +   G +   
Sbjct: 95  DEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATV 154

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +                     ++SH+  AD P   +N VQ +R
Sbjct: 155 TVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQR 214

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F   ++  +        A L++SS  +  P+  F L RPGI++YG +         +   
Sbjct: 215 FTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPA 274

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  IGYADG   +L G          
Sbjct: 275 MTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRL-------- 326

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDI----KLDDVALAS 350
              +  I G   P +G+I MD  M D+      +  GD   +FGP I       D A   
Sbjct: 327 ---EVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 383

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 384 GTIHYEVVTSPRGRITRTY 402


>gi|193067831|ref|ZP_03048797.1| alanine racemase [Escherichia coli E110019]
 gi|192958806|gb|EDV89243.1| alanine racemase [Escherichia coli E110019]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++  +             +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPMISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|196036671|ref|ZP_03104064.1| alanine racemase [Bacillus cereus W]
 gi|195990740|gb|EDX54715.1| alanine racemase [Bacillus cereus W]
          Length = 391

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAATEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|67922161|ref|ZP_00515676.1| Alanine racemase [Crocosphaera watsonii WH 8501]
 gi|67856061|gb|EAM51305.1| Alanine racemase [Crocosphaera watsonii WH 8501]
          Length = 405

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/379 (29%), Positives = 166/379 (43%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++IDL+AL +N   +  L S      AVVK +AYG G   +A  +  AG     V
Sbjct: 25  RQRAWVEIDLSALSHNVVQIKQLLSPKTALMAVVKADAYGHGAIAVAQTVLEAGANALAV 84

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            ++ EG++LR     A I +L  I+  +E        I      PQ        L     
Sbjct: 85  ATLGEGIELREAGITAPILILGAINTPEEIAAIAHWNIEPTLCDPQQAIIFSQTLSQWEK 144

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++DTG +RLG+   +  +F          +L+ + SHLA ADDP      +Q +
Sbjct: 145 PLSVHLKLDTGMSRLGMPWHQGTEFASLVKKLPYLKLNSVYSHLATADDPDRTNMYLQHK 204

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQ 233
           RF+T IS       K      A+S+  L+ P  H+ L R G+ LYG     +      ++
Sbjct: 205 RFKTAISQLKAQGVKPPRLHFANSAATLIAPQLHYDLVRVGLGLYGLYPAPHLRSIVSLK 264

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +A+I  I+   A   VSYG Q    R   IAV  IGYADG P  LS         
Sbjct: 265 PVLQVKAKITQIKTIPANTGVSYGYQFVSDRPMKIAVVGIGYADGVPRQLSNRL------ 318

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  IKG     +G ITMD  M D++    ++VGD + + G D    I  +  A  
Sbjct: 319 -----QVLIKGQRACQIGAITMDQLMLDVSHLRHLKVGDTVTLIGQDGNQEITANHWATM 373

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            GT ++++L     R  + 
Sbjct: 374 LGTISWEILCGFKHRLPRI 392


>gi|331087586|ref|ZP_08336516.1| alanine racemase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|330400457|gb|EGG80090.1| alanine racemase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 383

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 27/386 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M  +  +  +IDL A+  N   M   +   AR  AV+K + YG G   IA      + V 
Sbjct: 1   MDQHNRVCAQIDLDAIAYNMEQMKDQIGKEARLIAVIKTDGYGHGAVPIARMFETFSYVW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            + V  +EE V LR    +  I VL  + P Q + +    +   + +       S     
Sbjct: 61  GYAVACIEEAVSLRKEGIKKPILVLGCVFPDQYETMIKNEIRAAVYTKEMAEGMSDEAVR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +  + +++DTG  R+G  +  E+++            +  + +H A AD+       
Sbjct: 121 QGKNAYFHIKIDTGMGRIGFPVNSESVNLIEEISKLPNIHMEGLFTHFAKADEKEKSYTL 180

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q ERF  +    +            +S+GI+  PN    L R GIS YG          
Sbjct: 181 KQHERFLWMKEQLEKRNVDITYYDCDNSAGIIDFPNLKHDLARAGISTYGMYPSDEVQKS 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++  ++  + I  +++  AG  +SYGG         IA   +GY DGYP +LS    
Sbjct: 241 NVHLKPALSLISHITFVKEVEAGTPISYGGTFVAPEKMKIATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   I+G    I+G++ MD  M D+TD       D + + G     +I ++
Sbjct: 298 --------KGSVLIRGKRAKIVGRVCMDQFMVDVTDIPGAAFMDRVVLIGKDGKDEITVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +++  SG  NY+ +  +G R  + YT
Sbjct: 350 ELSKLSGRFNYEFVCCLGKRIPRVYT 375


>gi|218903226|ref|YP_002451060.1| alanine racemase [Bacillus cereus AH820]
 gi|218535647|gb|ACK88045.1| alanine racemase [Bacillus cereus AH820]
          Length = 391

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +      ++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAATEEAIQYGVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|218556610|ref|YP_002389524.1| alanine racemase [Escherichia coli IAI1]
 gi|218363379|emb|CAR01032.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           IAI1]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 170/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +      I      Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSIGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|47566849|ref|ZP_00237567.1| alanine racemase [Bacillus cereus G9241]
 gi|47556478|gb|EAL14811.1| alanine racemase [Bacillus cereus G9241]
          Length = 391

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G      I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEGNIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|228933402|ref|ZP_04096256.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229138804|ref|ZP_04267385.1| Alanine racemase [Bacillus cereus BDRD-ST26]
 gi|228644720|gb|EEL00971.1| Alanine racemase [Bacillus cereus BDRD-ST26]
 gi|228826266|gb|EEM72045.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 408

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|260858163|ref|YP_003232054.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O26:H11 str. 11368]
 gi|257756812|dbj|BAI28314.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O26:H11 str. 11368]
 gi|323155607|gb|EFZ41782.1| alanine racemase [Escherichia coli EPECa14]
          Length = 365

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|148265867|ref|YP_001232573.1| alanine racemase [Geobacter uraniireducens Rf4]
 gi|146399367|gb|ABQ28000.1| alanine racemase [Geobacter uraniireducens Rf4]
          Length = 384

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 168/383 (43%), Gaps = 28/383 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     +IDL AL++N++ +       +   AVVK +AYG G   I+  L   GV  F V
Sbjct: 11  SRPTIAEIDLAALRHNYYQVKKAVPAGSGLLAVVKADAYGHGFMDISRELEALGVTAFGV 70

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             + EG++LR       I +L GI+PGQEK     N+   + S+ Q      +       
Sbjct: 71  AFLAEGIQLRKSGIDRPILLLGGIYPGQEKKCVGFNISTAVFSLDQARVLDDVARKLYRK 130

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQ 178
               L+VDTG  RLG+  +EA  F       K  +L  I SH A AD+         + Q
Sbjct: 131 AKIHLKVDTGMGRLGIRYEEAPAFFRELKKLKNLELEGIFSHFASADELDDEGSGYTARQ 190

Query: 179 LERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHP 231
            E F  ++       +      +A+S+           L RPGI LYG     +      
Sbjct: 191 TEIFAAVLQEGTRQGFSPTFVHIANSAAAFSRDFPFCNLARPGIVLYGALPSADFQGKID 250

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+  ++R+ +++    G  +SY  +    + +L+A   +GYADGY   L+       
Sbjct: 251 VKPVMRLKSRVAMLKWVEPGTSISYARRYVAGKKTLVASVPVGYADGYCRALTN------ 304

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDV 346
                 G+  ++G    + G + MD  M D+TD   + VGD + + G D     I  +++
Sbjct: 305 -----KGEALVRGQRARVAGTVCMDWIMLDVTDIAGVAVGDEVTLLGCDNQGNCIHAEEL 359

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  SGT  Y++   I  R  + Y
Sbjct: 360 AAWSGTIAYEIFCGISKRVPRVY 382


>gi|325915922|ref|ZP_08178218.1| alanine racemase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537889|gb|EGD09589.1| alanine racemase [Xanthomonas vesicatoria ATCC 35937]
          Length = 368

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 165/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLDALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  + S PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEQDELRLIAEHDLWTVVSTPQQVRALAEFQSPRPLRI 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKLDSGMHRLGLSPEDFRAAWLRLHGLPQIASMVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
           L +     E S+ +S G+L  P      +RPG+ LYG          +  ++ V+T  +R
Sbjct: 179 LTAGGMRAETSIRNSPGLLGWPALRNDWSRPGLMLYGANPFPHDTELTTQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPML 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQADIGSGVQLWGDAPRVSPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|292493497|ref|YP_003528936.1| alanine racemase [Nitrosococcus halophilus Nc4]
 gi|291582092|gb|ADE16549.1| alanine racemase [Nitrosococcus halophilus Nc4]
          Length = 356

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F +  IDL+AL++N   +  L   +R  AVVK + YG G ++IA  L  A    F V  
Sbjct: 2   NFPQAIIDLSALRHNLQRVRELVPRSRVMAVVKADGYGHGLKRIAQVLAEAHA--FAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    +  I +L GI   +E  +     + ++                     
Sbjct: 60  LGEALVLRQAGYRGDIVLLEGIADKEELQLAAAYHLTLVVHEATQLDLLWQAPVNAPLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L+VDTG +RLG   +   +   +      +  +  ++SHLA AD     + ++QLE F 
Sbjct: 120 WLKVDTGMHRLGFPPERVAEAVTSLRRCPAVAAVVGLMSHLANADQAEDSLTAIQLETFE 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEA 240
            +     G+  S+A+S+ ++  P  HF   RPG+ LYG +        +  ++ V+T + 
Sbjct: 180 RIT--VPGLWRSMANSAAVIACPQAHFDWVRPGLMLYGVSPFAHCTGAAVGLKPVMTLKT 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I I     G+ + YG          + VAAIGY DGYP                G   
Sbjct: 238 RLIAIHHLHPGDSIGYGATWVCPEAMAVGVAAIGYGDGYPRHA-----------APGTPL 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G  VP++G+++MDM   D+      +VGD + ++G  + ++++A  + T  Y+LL +
Sbjct: 287 LVNGRPVPLVGRVSMDMVTLDLRSQPEAKVGDPVIVWGAGLPVEEIACHAATIPYELLCQ 346

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 347 VTARVPRI 354


>gi|16131879|ref|NP_418477.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K-12 substr. MG1655]
 gi|24115357|ref|NP_709867.1| alanine racemase [Shigella flexneri 2a str. 301]
 gi|30064642|ref|NP_838813.1| alanine racemase [Shigella flexneri 2a str. 2457T]
 gi|89110774|ref|AP_004554.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K-12 substr. W3110]
 gi|91213579|ref|YP_543565.1| alanine racemase [Escherichia coli UTI89]
 gi|110807930|ref|YP_691450.1| alanine racemase [Shigella flexneri 5 str. 8401]
 gi|117626323|ref|YP_859646.1| alanine racemase [Escherichia coli APEC O1]
 gi|157163522|ref|YP_001460840.1| alanine racemase [Escherichia coli HS]
 gi|170021949|ref|YP_001726903.1| alanine racemase [Escherichia coli ATCC 8739]
 gi|170083510|ref|YP_001732830.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170680683|ref|YP_001746442.1| alanine racemase [Escherichia coli SMS-3-5]
 gi|188492399|ref|ZP_02999669.1| alanine racemase [Escherichia coli 53638]
 gi|191168796|ref|ZP_03030572.1| alanine racemase [Escherichia coli B7A]
 gi|194437323|ref|ZP_03069421.1| alanine racemase [Escherichia coli 101-1]
 gi|209921537|ref|YP_002295621.1| alanine racemase [Escherichia coli SE11]
 gi|215489388|ref|YP_002331819.1| alanine racemase [Escherichia coli O127:H6 str. E2348/69]
 gi|218561126|ref|YP_002394039.1| alanine racemase [Escherichia coli S88]
 gi|218697761|ref|YP_002405428.1| alanine racemase [Escherichia coli 55989]
 gi|218702717|ref|YP_002410346.1| alanine racemase [Escherichia coli IAI39]
 gi|237703613|ref|ZP_04534094.1| alanine racemase 1 [Escherichia sp. 3_2_53FAA]
 gi|238903162|ref|YP_002928958.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           BW2952]
 gi|253775319|ref|YP_003038150.1| alanine racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254037050|ref|ZP_04871127.1| alanine racemase 1 [Escherichia sp. 1_1_43]
 gi|254163989|ref|YP_003047097.1| alanine racemase [Escherichia coli B str. REL606]
 gi|256024926|ref|ZP_05438791.1| alanine racemase [Escherichia sp. 4_1_40B]
 gi|260870812|ref|YP_003237214.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O111:H- str. 11128]
 gi|293476357|ref|ZP_06664765.1| alanine racemase [Escherichia coli B088]
 gi|300817971|ref|ZP_07098184.1| alanine racemase [Escherichia coli MS 107-1]
 gi|300823594|ref|ZP_07103722.1| alanine racemase [Escherichia coli MS 119-7]
 gi|300906364|ref|ZP_07124062.1| alanine racemase [Escherichia coli MS 84-1]
 gi|300917299|ref|ZP_07133972.1| alanine racemase [Escherichia coli MS 115-1]
 gi|300924316|ref|ZP_07140295.1| alanine racemase [Escherichia coli MS 182-1]
 gi|300929792|ref|ZP_07145244.1| alanine racemase [Escherichia coli MS 187-1]
 gi|300938190|ref|ZP_07152960.1| alanine racemase [Escherichia coli MS 21-1]
 gi|300946625|ref|ZP_07160884.1| alanine racemase [Escherichia coli MS 116-1]
 gi|300957537|ref|ZP_07169744.1| alanine racemase [Escherichia coli MS 175-1]
 gi|301019191|ref|ZP_07183389.1| alanine racemase [Escherichia coli MS 196-1]
 gi|301302732|ref|ZP_07208861.1| alanine racemase [Escherichia coli MS 124-1]
 gi|301645041|ref|ZP_07245004.1| alanine racemase [Escherichia coli MS 146-1]
 gi|306815836|ref|ZP_07449981.1| alanine racemase [Escherichia coli NC101]
 gi|307140743|ref|ZP_07500099.1| alanine racemase [Escherichia coli H736]
 gi|307312105|ref|ZP_07591742.1| alanine racemase [Escherichia coli W]
 gi|309795859|ref|ZP_07690273.1| alanine racemase [Escherichia coli MS 145-7]
 gi|312965646|ref|ZP_07779875.1| alanine racemase [Escherichia coli 2362-75]
 gi|312974153|ref|ZP_07788324.1| alanine racemase [Escherichia coli 1827-70]
 gi|331644794|ref|ZP_08345911.1| alanine racemase [Escherichia coli H736]
 gi|331670916|ref|ZP_08371750.1| alanine racemase [Escherichia coli TA271]
 gi|331680183|ref|ZP_08380842.1| alanine racemase [Escherichia coli H591]
 gi|331680983|ref|ZP_08381620.1| alanine racemase [Escherichia coli H299]
 gi|67462106|sp|P0A6B4|ALR1_ECOLI RecName: Full=Alanine racemase, biosynthetic
 gi|67462107|sp|P0A6B5|ALR1_SHIFL RecName: Full=Alanine racemase, biosynthetic
 gi|67462108|sp|P0A6B6|ALR1_SHIBO RecName: Full=Alanine racemase, biosynthetic
 gi|1790487|gb|AAC77023.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K-12 substr. MG1655]
 gi|16610217|dbj|BAB71771.1| alanine racemase [Shigella boydii]
 gi|24054663|gb|AAN45574.1| alanine racemase 1 [Shigella flexneri 2a str. 301]
 gi|30042901|gb|AAP18624.1| alanine racemase 1 [Shigella flexneri 2a str. 2457T]
 gi|85676805|dbj|BAE78055.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K12 substr. W3110]
 gi|91075153|gb|ABE10034.1| alanine racemase 1 [Escherichia coli UTI89]
 gi|110617478|gb|ABF06145.1| alanine racemase 1 [Shigella flexneri 5 str. 8401]
 gi|115515447|gb|ABJ03522.1| alanine racemase 1 [Escherichia coli APEC O1]
 gi|157069202|gb|ABV08457.1| alanine racemase [Escherichia coli HS]
 gi|169756877|gb|ACA79576.1| alanine racemase [Escherichia coli ATCC 8739]
 gi|169891345|gb|ACB05052.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170518401|gb|ACB16579.1| alanine racemase [Escherichia coli SMS-3-5]
 gi|188487598|gb|EDU62701.1| alanine racemase [Escherichia coli 53638]
 gi|190901174|gb|EDV60947.1| alanine racemase [Escherichia coli B7A]
 gi|194423879|gb|EDX39868.1| alanine racemase [Escherichia coli 101-1]
 gi|209914796|dbj|BAG79870.1| alanine racemase [Escherichia coli SE11]
 gi|215267460|emb|CAS11914.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218354493|emb|CAV01345.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           55989]
 gi|218367895|emb|CAR05690.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           S88]
 gi|218372703|emb|CAR20579.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           IAI39]
 gi|222035765|emb|CAP78510.1| alanine racemase, biosynthetic [Escherichia coli LF82]
 gi|226840156|gb|EEH72158.1| alanine racemase 1 [Escherichia sp. 1_1_43]
 gi|226901525|gb|EEH87784.1| alanine racemase 1 [Escherichia sp. 3_2_53FAA]
 gi|238859949|gb|ACR61947.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           BW2952]
 gi|242379581|emb|CAQ34402.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           BL21(DE3)]
 gi|253326363|gb|ACT30965.1| alanine racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253975890|gb|ACT41561.1| alanine racemase [Escherichia coli B str. REL606]
 gi|253980046|gb|ACT45716.1| alanine racemase [Escherichia coli BL21(DE3)]
 gi|257767168|dbj|BAI38663.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O111:H- str. 11128]
 gi|260451118|gb|ACX41540.1| alanine racemase [Escherichia coli DH1]
 gi|281603462|gb|ADA76446.1| Alanine racemase, biosynthetic [Shigella flexneri 2002017]
 gi|291320810|gb|EFE60252.1| alanine racemase [Escherichia coli B088]
 gi|299882348|gb|EFI90559.1| alanine racemase [Escherichia coli MS 196-1]
 gi|300315711|gb|EFJ65495.1| alanine racemase [Escherichia coli MS 175-1]
 gi|300401812|gb|EFJ85350.1| alanine racemase [Escherichia coli MS 84-1]
 gi|300415443|gb|EFJ98753.1| alanine racemase [Escherichia coli MS 115-1]
 gi|300419481|gb|EFK02792.1| alanine racemase [Escherichia coli MS 182-1]
 gi|300453724|gb|EFK17344.1| alanine racemase [Escherichia coli MS 116-1]
 gi|300456848|gb|EFK20341.1| alanine racemase [Escherichia coli MS 21-1]
 gi|300462298|gb|EFK25791.1| alanine racemase [Escherichia coli MS 187-1]
 gi|300523926|gb|EFK44995.1| alanine racemase [Escherichia coli MS 119-7]
 gi|300529381|gb|EFK50443.1| alanine racemase [Escherichia coli MS 107-1]
 gi|300841952|gb|EFK69712.1| alanine racemase [Escherichia coli MS 124-1]
 gi|301076663|gb|EFK91469.1| alanine racemase [Escherichia coli MS 146-1]
 gi|305850811|gb|EFM51267.1| alanine racemase [Escherichia coli NC101]
 gi|306907912|gb|EFN38413.1| alanine racemase [Escherichia coli W]
 gi|307629105|gb|ADN73409.1| alanine racemase [Escherichia coli UM146]
 gi|308120520|gb|EFO57782.1| alanine racemase [Escherichia coli MS 145-7]
 gi|309704520|emb|CBJ03869.1| alanine racemase [Escherichia coli ETEC H10407]
 gi|310331687|gb|EFP98943.1| alanine racemase [Escherichia coli 1827-70]
 gi|312289620|gb|EFR17511.1| alanine racemase [Escherichia coli 2362-75]
 gi|312948630|gb|ADR29457.1| alanine racemase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313648749|gb|EFS13189.1| alanine racemase [Shigella flexneri 2a str. 2457T]
 gi|315063377|gb|ADT77704.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli W]
 gi|315138607|dbj|BAJ45766.1| alanine racemase [Escherichia coli DH1]
 gi|315254725|gb|EFU34693.1| alanine racemase [Escherichia coli MS 85-1]
 gi|315297524|gb|EFU56803.1| alanine racemase [Escherichia coli MS 16-3]
 gi|315617421|gb|EFU98027.1| alanine racemase [Escherichia coli 3431]
 gi|320193412|gb|EFW68049.1| Alanine racemase, biosynthetic [Escherichia coli WV_060327]
 gi|320200816|gb|EFW75402.1| Alanine racemase, biosynthetic [Escherichia coli EC4100B]
 gi|323171196|gb|EFZ56844.1| alanine racemase [Escherichia coli LT-68]
 gi|323175939|gb|EFZ61531.1| alanine racemase [Escherichia coli 1180]
 gi|323182156|gb|EFZ67566.1| alanine racemase [Escherichia coli 1357]
 gi|323380559|gb|ADX52827.1| alanine racemase [Escherichia coli KO11]
 gi|323935542|gb|EGB31873.1| alanine racemase [Escherichia coli E1520]
 gi|323940236|gb|EGB36429.1| alanine racemase [Escherichia coli E482]
 gi|323946186|gb|EGB42220.1| alanine racemase [Escherichia coli H120]
 gi|323950400|gb|EGB46281.1| alanine racemase [Escherichia coli H252]
 gi|323954482|gb|EGB50266.1| alanine racemase [Escherichia coli H263]
 gi|323960459|gb|EGB56092.1| alanine racemase [Escherichia coli H489]
 gi|323969813|gb|EGB65094.1| alanine racemase [Escherichia coli TA007]
 gi|324007777|gb|EGB76996.1| alanine racemase [Escherichia coli MS 57-2]
 gi|324017104|gb|EGB86323.1| alanine racemase [Escherichia coli MS 117-3]
 gi|324118625|gb|EGC12517.1| alanine racemase [Escherichia coli E1167]
 gi|331035769|gb|EGI08007.1| alanine racemase [Escherichia coli H736]
 gi|331061830|gb|EGI33755.1| alanine racemase [Escherichia coli TA271]
 gi|331071646|gb|EGI42982.1| alanine racemase [Escherichia coli H591]
 gi|331081204|gb|EGI52365.1| alanine racemase [Escherichia coli H299]
 gi|332346052|gb|AEE59386.1| alanine racemase [Escherichia coli UMNK88]
 gi|332751997|gb|EGJ82390.1| alanine racemase [Shigella flexneri 4343-70]
 gi|332752167|gb|EGJ82559.1| alanine racemase [Shigella flexneri K-671]
 gi|332753294|gb|EGJ83675.1| alanine racemase [Shigella flexneri 2747-71]
 gi|332764759|gb|EGJ94988.1| alanine racemase [Shigella flexneri 2930-71]
 gi|332998121|gb|EGK17725.1| alanine racemase [Shigella flexneri VA-6]
 gi|332999051|gb|EGK18640.1| alanine racemase [Shigella flexneri K-272]
 gi|332999100|gb|EGK18687.1| alanine racemase [Shigella flexneri K-218]
 gi|333014184|gb|EGK33540.1| alanine racemase [Shigella flexneri K-304]
 gi|333014415|gb|EGK33766.1| alanine racemase [Shigella flexneri K-227]
          Length = 359

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|311281403|ref|YP_003943634.1| alanine racemase [Enterobacter cloacae SCF1]
 gi|308750598|gb|ADO50350.1| alanine racemase [Enterobacter cloacae SCF1]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 170/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +  +     +       +     +  +        +
Sbjct: 62  EALRLREGGITQPILLLEGFFNAGDLPVISAQRLHTAVHNLEQLEALEQATLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  + + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCQNVRQPVNIVSHFARADEPECGATERQLDVFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  HF   RPGI LYG +            +Q V++  + 
Sbjct: 182 CDGKPGMR-SIAASGGILLWPQSHFDWVRPGIILYGVSPLEGKPWGPDFGLQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG  +  RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWESARDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+        GD + ++G  + ++ +A  S  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDRAGDPVVLWGEGLPVERIAELSKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|15804645|ref|NP_290686.1| alanine racemase [Escherichia coli O157:H7 EDL933]
 gi|15834289|ref|NP_313062.1| alanine racemase [Escherichia coli O157:H7 str. Sakai]
 gi|168748102|ref|ZP_02773124.1| alanine racemase [Escherichia coli O157:H7 str. EC4113]
 gi|168755220|ref|ZP_02780227.1| alanine racemase [Escherichia coli O157:H7 str. EC4401]
 gi|168760899|ref|ZP_02785906.1| alanine racemase [Escherichia coli O157:H7 str. EC4501]
 gi|168766310|ref|ZP_02791317.1| alanine racemase [Escherichia coli O157:H7 str. EC4486]
 gi|168774408|ref|ZP_02799415.1| alanine racemase [Escherichia coli O157:H7 str. EC4196]
 gi|168780463|ref|ZP_02805470.1| alanine racemase [Escherichia coli O157:H7 str. EC4076]
 gi|168784666|ref|ZP_02809673.1| alanine racemase [Escherichia coli O157:H7 str. EC869]
 gi|168798287|ref|ZP_02823294.1| alanine racemase [Escherichia coli O157:H7 str. EC508]
 gi|195935836|ref|ZP_03081218.1| alanine racemase [Escherichia coli O157:H7 str. EC4024]
 gi|208806109|ref|ZP_03248446.1| alanine racemase [Escherichia coli O157:H7 str. EC4206]
 gi|208812590|ref|ZP_03253919.1| alanine racemase [Escherichia coli O157:H7 str. EC4045]
 gi|208819299|ref|ZP_03259619.1| alanine racemase [Escherichia coli O157:H7 str. EC4042]
 gi|209397944|ref|YP_002273593.1| alanine racemase [Escherichia coli O157:H7 str. EC4115]
 gi|217325461|ref|ZP_03441545.1| alanine racemase [Escherichia coli O157:H7 str. TW14588]
 gi|254796072|ref|YP_003080909.1| alanine racemase [Escherichia coli O157:H7 str. TW14359]
 gi|261225171|ref|ZP_05939452.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255577|ref|ZP_05948110.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285469|ref|YP_003502287.1| Alanine racemase, biosynthetic [Escherichia coli O55:H7 str.
           CB9615]
 gi|20137342|sp|Q8X5V2|ALR1_ECO57 RecName: Full=Alanine racemase, biosynthetic
 gi|12519004|gb|AAG59251.1|AE005638_5 alanine racemase 1 [Escherichia coli O157:H7 str. EDL933]
 gi|13364512|dbj|BAB38458.1| alanine racemase 1 [Escherichia coli O157:H7 str. Sakai]
 gi|187769867|gb|EDU33711.1| alanine racemase [Escherichia coli O157:H7 str. EC4196]
 gi|188017506|gb|EDU55628.1| alanine racemase [Escherichia coli O157:H7 str. EC4113]
 gi|189001846|gb|EDU70832.1| alanine racemase [Escherichia coli O157:H7 str. EC4076]
 gi|189357442|gb|EDU75861.1| alanine racemase [Escherichia coli O157:H7 str. EC4401]
 gi|189364060|gb|EDU82479.1| alanine racemase [Escherichia coli O157:H7 str. EC4486]
 gi|189368602|gb|EDU87018.1| alanine racemase [Escherichia coli O157:H7 str. EC4501]
 gi|189374890|gb|EDU93306.1| alanine racemase [Escherichia coli O157:H7 str. EC869]
 gi|189379189|gb|EDU97605.1| alanine racemase [Escherichia coli O157:H7 str. EC508]
 gi|208725910|gb|EDZ75511.1| alanine racemase [Escherichia coli O157:H7 str. EC4206]
 gi|208733867|gb|EDZ82554.1| alanine racemase [Escherichia coli O157:H7 str. EC4045]
 gi|208739422|gb|EDZ87104.1| alanine racemase [Escherichia coli O157:H7 str. EC4042]
 gi|209159344|gb|ACI36777.1| alanine racemase [Escherichia coli O157:H7 str. EC4115]
 gi|209751260|gb|ACI73937.1| alanine racemase 1 [Escherichia coli]
 gi|209751262|gb|ACI73938.1| alanine racemase 1 [Escherichia coli]
 gi|209751264|gb|ACI73939.1| alanine racemase 1 [Escherichia coli]
 gi|209751266|gb|ACI73940.1| alanine racemase 1 [Escherichia coli]
 gi|217321682|gb|EEC30106.1| alanine racemase [Escherichia coli O157:H7 str. TW14588]
 gi|254595472|gb|ACT74833.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O157:H7 str. TW14359]
 gi|290765342|gb|ADD59303.1| Alanine racemase, biosynthetic [Escherichia coli O55:H7 str.
           CB9615]
 gi|320190822|gb|EFW65472.1| Alanine racemase, biosynthetic [Escherichia coli O157:H7 str.
           EC1212]
 gi|320638809|gb|EFX08455.1| alanine racemase [Escherichia coli O157:H7 str. G5101]
 gi|320654892|gb|EFX22853.1| alanine racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320660740|gb|EFX28197.1| alanine racemase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665669|gb|EFX32706.1| alanine racemase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341902|gb|EGD65685.1| Alanine racemase, biosynthetic [Escherichia coli O157:H7 str. 1125]
 gi|326346524|gb|EGD70258.1| Alanine racemase, biosynthetic [Escherichia coli O157:H7 str. 1044]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKVGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|238754673|ref|ZP_04616026.1| Alanine racemase 1 [Yersinia ruckeri ATCC 29473]
 gi|238707132|gb|EEP99496.1| Alanine racemase 1 [Yersinia ruckeri ATCC 29473]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 112/367 (30%), Positives = 177/367 (48%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRLAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFSAEDLPVLVVNHIETAVHSIEQLEALEQADLPYPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   EA  F    S    + Q   I+SH + AD+P       Q+E F T 
Sbjct: 122 KLDTGMHRLGVRPDEAEAFYQRLSACHNVVQPINIMSHFSQADEPEVSATRQQIECFDTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARI 242
           ++   G + S+A+S GILL P+ H    RPGI LYG +    K      +Q  +T ++ +
Sbjct: 182 VADKPG-KQSIAASGGILLWPDSHRDWVRPGIVLYGVSPIEQKNGADFGLQPGMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  AGE V YGG     RD+ + V A+GY DGYP +              G   ++
Sbjct: 241 IAVRKHKAGEPVGYGGTWVSQRDTRLGVVAMGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+    S  VGD ++++G D+ ++ VA+A+G + Y+L+ ++ 
Sbjct: 290 NGREVPIVGRVSMDMISVDLGPDSSDRVGDEVELWGADLPVEKVAIATGISAYELITKLT 349

Query: 363 TRYAKFY 369
            R +  Y
Sbjct: 350 PRVSMEY 356


>gi|29654196|ref|NP_819888.1| alanine racemase, biosynthetic [Coxiella burnetii RSA 493]
 gi|165918546|ref|ZP_02218632.1| alanine racemase [Coxiella burnetii RSA 334]
 gi|81839075|sp|Q83D71|ALR_COXBU RecName: Full=Alanine racemase
 gi|29541462|gb|AAO90402.1| alanine racemase, biosynthetic [Coxiella burnetii RSA 493]
 gi|165917792|gb|EDR36396.1| alanine racemase [Coxiella burnetii RSA 334]
          Length = 364

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 172/370 (46%), Gaps = 23/370 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I++TALK+N   + AL+  +   A++K N YG G  ++A AL +A    F V  
Sbjct: 2   NRATATINVTALKHNLSQIKALAPKSLAWAMIKSNGYGHGLVRVAKALSDANA--FGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    ++ I V+ G +   E   F  + +  +          +  +   S   
Sbjct: 60  IDEALTLREVGIKSPIIVMKGFYNEAELSQFARHRLGAVIHCSDQVSLLEKTNLTSSLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG NRLG S++++    +    +  + +   +++HLA AD+ +     +Q++RF 
Sbjct: 120 WLKIDTGMNRLGFSVEQSPAVYNQLKTSSSIQKPIGLMTHLADADNENKTFTELQIKRFF 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--------INKSHPMQTV 235
           ++     G   S+ +S+G    PN      RPGI LYG +                 + V
Sbjct: 180 SVTEKMIG-PKSIVNSAGFFAYPNALVDWIRPGIILYGISPFGINYNSFKEKIEKKFRPV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A+II I+     + V YG       D  IA+ +IGY DGYP               
Sbjct: 239 MTLSAKIIAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHA-----------P 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G + P++G+++MDM   D+    + +VGD + ++G  + ++ +A  +GT  Y
Sbjct: 288 SGTPVLLNGKICPLIGRVSMDMIAIDLRSQPNAQVGDDVILWGEGLPVEIIAEKAGTIAY 347

Query: 356 DLLVRIGTRY 365
           +LL +I  R 
Sbjct: 348 ELLCKITQRV 357


>gi|301053620|ref|YP_003791831.1| alanine racemase [Bacillus anthracis CI]
 gi|300375789|gb|ADK04693.1| alanine racemase [Bacillus cereus biovar anthracis str. CI]
          Length = 408

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|212212678|ref|YP_002303614.1| alanine racemase, biosynthetic [Coxiella burnetii CbuG_Q212]
 gi|226711037|sp|B6J0J1|ALR_COXB2 RecName: Full=Alanine racemase
 gi|212011088|gb|ACJ18469.1| alanine racemase, biosynthetic [Coxiella burnetii CbuG_Q212]
          Length = 364

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 172/370 (46%), Gaps = 23/370 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I++TALK+N   + AL+  +   A++K N YG G  ++A AL +A    F V  
Sbjct: 2   NRATATINVTALKHNLSQIKALAPKSLAWAMIKSNGYGHGLVRVAKALSDANA--FGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    ++ I V+ G +   E   F  + +  +          K  +   S   
Sbjct: 60  IDEALTLREVGIKSPIIVMKGFYNEAELSQFARHRLGAVIHCSDQVSLLKKTNLTSSLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG NRLG S++++    +    +  + +   +++HLA AD+ +     +Q++RF 
Sbjct: 120 WLKIDTGMNRLGFSVEQSPAVYNQLKTSSSIQKPIGLMTHLADADNENKTFTELQIKRFF 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--------INKSHPMQTV 235
           ++     G   S+ +S+G    PN      RPGI LYG +                 + V
Sbjct: 180 SVTEKMIG-PKSIVNSAGFFAYPNALVDWIRPGIILYGISPFGINYNSFKEKIEKKFRPV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A+II I+     + V YG       D  IA+ +IGY DGYP               
Sbjct: 239 MTLSAKIIAIKNRRKNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHA-----------P 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G + P++G+++MDM   D+    + +VGD + ++G  + ++ +A  +GT  Y
Sbjct: 288 SGTPVLLNGKICPLIGRVSMDMIAIDLRSQPNAQVGDDVILWGEGLPVEIIAEKAGTIAY 347

Query: 356 DLLVRIGTRY 365
           +LL +I  R 
Sbjct: 348 ELLCKITQRV 357


>gi|237807335|ref|YP_002891775.1| alanine racemase [Tolumonas auensis DSM 9187]
 gi|237499596|gb|ACQ92189.1| alanine racemase [Tolumonas auensis DSM 9187]
          Length = 358

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 170/365 (46%), Gaps = 18/365 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R++I+L AL++N+  +   S  ++  AV+K NAYG     +A  L       F V  +E
Sbjct: 5   ARIQINLKALQHNFEKIKKCSPKSKIIAVIKGNAYGHDAVLVAKTLQQ--ADAFAVARIE 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E V LR    +  I +L G    ++ +I        +             S        L
Sbjct: 63  EAVVLRQAGIERPIVLLEGCFCAKDLLIAAHYQFQPVIHHAGQLADILSASLPTPVKVWL 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +R+G+  ++   +     N   +      +SH   AD+ S+     QL  F   
Sbjct: 123 KIDTGMHRIGIMPEQVAHYVTQLSNSANVSGHVGFVSHFYRADELSASTTHEQLACFIQA 182

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARI 242
            + Y G E SL++S+G+L   + HF   RPGI+LYG +        +  +Q V+T ++ +
Sbjct: 183 TAPYPG-EKSLSNSAGVLYWSDAHFDWVRPGIALYGISPRADSTGIAEGLQPVMTLKSTL 241

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE + YGG     +D+ I V A+GY DGYP                G    +
Sbjct: 242 ISVREHKAGESIGYGGHWIADQDTRIGVIAMGYGDGYPRMA-----------PAGTPVLV 290

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V + G+++MDM   D+      ++GD + ++G  +  ++VA   GT  Y+L+++I 
Sbjct: 291 NGRKVALAGRVSMDMMTVDLGPESQDQIGDEVTLWGNGLPAEEVARHIGTIAYELVIKIT 350

Query: 363 TRYAK 367
           +R  +
Sbjct: 351 SRVQR 355


>gi|331675585|ref|ZP_08376332.1| alanine racemase [Escherichia coli TA280]
 gi|331067193|gb|EGI38601.1| alanine racemase [Escherichia coli TA280]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  + + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCQNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|322382485|ref|ZP_08056373.1| alanine racemase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153547|gb|EFX45943.1| alanine racemase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 395

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/383 (24%), Positives = 158/383 (41%), Gaps = 29/383 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +++ L AL  N  +      ++ R  AVVK +AYG G   IA     +G     V 
Sbjct: 6   RPTWVEVSLDALSGNLQAFRQALPDSIRIMAVVKADAYGHGAASIAREAIASGADHLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS----KLMSCG 119
            ++E ++LR     A I VL    P   ++    N+   + +   L        +  +  
Sbjct: 66  FLDEALQLREAGISAPILVLGYTAPDGLEMALKNNITLTVFNEEMLRGMELLQGQAEALD 125

Query: 120 VSHPYALQVDTGFNRLG-LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 ++VD+G +R+G    +EA+ +           L  + +H ACAD+       +Q
Sbjct: 126 KRLRVHVKVDSGMHRIGLYKEEEAVSYLKQIARMPHICLEGLFTHYACADEADKAYTRLQ 185

Query: 179 LERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--- 230
            E+F  ++   K +   +      +S+  +  P   + + R GI++YG        H   
Sbjct: 186 YEKFSRVVHEVKRLGIDIPYIHAGNSAAAIDTPELVYNMARLGIAMYGLYPSEKVDHTII 245

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V++ + R+I  +    G  +SYG       +  I    IGYADG+   LS      
Sbjct: 246 KLEPVMSLKTRMIHDKWLSEGSGISYGTIYHTKGEERIGTLPIGYADGFSRMLS------ 299

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                      I+G  VPI+G+I MD  M +IT     E GD + + G      I  +++
Sbjct: 300 -----TKANALIRGKRVPIVGRICMDQCMLNITGVPEAEAGDEVVLIGRQGDEVIPAEEI 354

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT NY++   +  R  + Y
Sbjct: 355 AGHLGTINYEVTCMMAHRIPRVY 377


>gi|331650063|ref|ZP_08351136.1| alanine racemase [Escherichia coli M605]
 gi|330908377|gb|EGH36896.1| alanine racemase, biosynthetic [Escherichia coli AA86]
 gi|331041008|gb|EGI13165.1| alanine racemase [Escherichia coli M605]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  +        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEANLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|229196342|ref|ZP_04323090.1| Alanine racemase [Bacillus cereus m1293]
 gi|228587196|gb|EEK45266.1| Alanine racemase [Bacillus cereus m1293]
          Length = 408

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVASAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVIGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|209751258|gb|ACI73936.1| alanine racemase 1 [Escherichia coli]
 gi|320644177|gb|EFX13242.1| alanine racemase [Escherichia coli O157:H- str. 493-89]
 gi|320649496|gb|EFX18020.1| alanine racemase [Escherichia coli O157:H- str. H 2687]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRPTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKVGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|74314547|ref|YP_312966.1| alanine racemase [Shigella sonnei Ss046]
 gi|20137404|sp|Q93HP9|ALR1_SHISO RecName: Full=Alanine racemase, biosynthetic
 gi|16610221|dbj|BAB71773.1| alanine racemase [Shigella sonnei]
 gi|73858024|gb|AAZ90731.1| alanine racemase 1 [Shigella sonnei Ss046]
 gi|323164550|gb|EFZ50351.1| alanine racemase [Shigella sonnei 53G]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +      I      Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSIGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|294493177|gb|ADE91933.1| alanine racemase [Escherichia coli IHE3034]
          Length = 359

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASPDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|331091068|ref|ZP_08339910.1| alanine racemase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405290|gb|EGG84826.1| alanine racemase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 388

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M +   +  KIDL A+  N   M     G+ +  AV+K + YG G  ++A  L     + 
Sbjct: 1   MKTYSRVYAKIDLDAVTYNMEQMKQRIDGDTKIMAVIKSDGYGHGAIQVAEVLEKYDYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
            F V +++E V LR    Q  I VL  I P Q   + D ++   + +       S +   
Sbjct: 61  GFAVATLDEAVVLRTEGIQKPILVLGCIFPDQYLEMLDNDIRMNVYTEEMAKEISYMARR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    +++DTG  RLG ++  E++D            +  + +H A AD+       
Sbjct: 121 EGKTAYLHIKLDTGMARLGFAVNNESVDAITRISKLPNVNMEGVFTHFAKADETDKTFTK 180

Query: 177 VQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+ +F ++    +           A+S+ I+   +  F + R GIS YG       +  
Sbjct: 181 NQISQFVSMTEKLRERGVTFPYEHCANSAAIIDVEDARFDIVRAGISTYGLYPSEEVNQN 240

Query: 232 MQT---VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +  ++ +  +++   G  VSYGG     +   IA   +GY DGYP +LSG   
Sbjct: 241 AVHLKPALALKSHVAFVKEIEEGTPVSYGGTFVAEKKMKIATIPVGYGDGYPRSLSG--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G    ILG+I MD  M D+TD   +  GD + + G D    I ++
Sbjct: 298 --------KGYVLIRGKKANILGRICMDQFMVDVTDIEGVSFGDKVTLIGRDGNEAISVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + Y
Sbjct: 350 KLSELSGRFNYEFICALGKRIPRVY 374


>gi|193885285|pdb|3B8W|A Chain A, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221p
 gi|193885286|pdb|3B8W|B Chain B, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221p
 gi|193885287|pdb|3B8W|C Chain C, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221p
 gi|193885288|pdb|3B8W|D Chain D, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221p
          Length = 379

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 24  ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 82  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 141

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 142 XLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 201

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 202 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLPDRSTGADFGCQPVMSLTSS 260

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 261 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 309

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 310 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 369

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 370 TSRVAMKY 377


>gi|283836658|ref|ZP_06356399.1| alanine racemase [Citrobacter youngae ATCC 29220]
 gi|291067398|gb|EFE05507.1| alanine racemase [Citrobacter youngae ATCC 29220]
          Length = 359

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPVLLLEGFFDATDLPTISAQRLHTAVHNLEQLEALEAAKLAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    +  + + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLTQCENVRQPVNIVSHFARADEPECGATEKQLDIFNRF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPG+ LYG +      I      Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWARPGLILYGVSPLENHSIGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG  +  RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWQSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPEAQDKAGDSVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|193885281|pdb|3B8V|A Chain A, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221k
 gi|193885282|pdb|3B8V|B Chain B, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221k
 gi|193885283|pdb|3B8V|C Chain C, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221k
 gi|193885284|pdb|3B8V|D Chain D, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221k
          Length = 379

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 24  ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 82  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 141

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 142 XLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 201

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 202 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLKDRSTGADFGCQPVMSLTSS 260

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 261 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 309

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 310 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 369

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 370 TSRVAMKY 377


>gi|157157084|ref|YP_001465553.1| alanine racemase [Escherichia coli E24377A]
 gi|157079114|gb|ABV18822.1| alanine racemase [Escherichia coli E24377A]
          Length = 359

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKSG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|293417557|ref|ZP_06660179.1| alanine racemase [Escherichia coli B185]
 gi|291430275|gb|EFF03273.1| alanine racemase [Escherichia coli B185]
          Length = 359

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPRCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|110633340|ref|YP_673548.1| alanine racemase [Mesorhizobium sp. BNC1]
 gi|110284324|gb|ABG62383.1| alanine racemase [Chelativorans sp. BNC1]
          Length = 389

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 151/366 (41%), Positives = 219/366 (59%), Gaps = 5/366 (1%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           RL +DL+AL  N+  +   S  A  AAV+K +AYGLG + +  AL+ AG + FFV   +E
Sbjct: 20  RLTVDLSALVANYQLLARRSAPAGAAAVLKADAYGLGLKPVGSALWAAGCRRFFVALPQE 79

Query: 68  GVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYA 125
           G++LR   P+A IFVL G+          +  LIPV++S   ++ +     +   S P A
Sbjct: 80  GIELRAILPEAEIFVLTGLFAVESAAAYREARLIPVLNSQSDISIWEAHGWNDQRSRPCA 139

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + VDTG NRLGL+ + A      +         L++SHLACAD P   +N  QLE F+ +
Sbjct: 140 VHVDTGMNRLGLTPERARSLAEENALTGALTPILLMSHLACADTPDHPLNRRQLELFQAV 199

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + +   E+SL +S+GI LG ++   LTRPGI+LYGG      ++PM+ V T EAR++ +
Sbjct: 200 RTLFPQSESSLCNSAGIFLGSDFLCDLTRPGIALYGGAPVKGIANPMRAVATVEARVVQV 259

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AGE VSYG      RDS+IAV + GYADGY L  SG       +V    +GFI G 
Sbjct: 260 RHVRAGETVSYGATPLA-RDSVIAVCSAGYADGYHLAGSGDRVPLRRAVRKAAEGFIHGR 318

Query: 306 MVPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
            VP++G++TMD+T+FD+T+     I  GD+I++FGP++ +D+VA A+GT  Y+LL  +G 
Sbjct: 319 RVPVVGRVTMDLTLFDVTEVGMDVIAPGDHIELFGPNMPIDEVAEAAGTIAYELLTSLGR 378

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 379 RYYREY 384


>gi|324326142|gb|ADY21402.1| alanine racemase [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 408

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEDAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|228985202|ref|ZP_04145367.1| Alanine racemase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|228774497|gb|EEM22898.1| Alanine racemase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 408

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 164/376 (43%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E ++LR       I +L        +     +++  +     L   +++ +         
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANSLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|313112921|ref|ZP_07798567.1| alanine racemase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310624826|gb|EFQ08135.1| alanine racemase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 400

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/394 (23%), Positives = 160/394 (40%), Gaps = 35/394 (8%)

Query: 1   MHSNEF---LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  F   +  +IDL AL++N+ ++ A +G+    AVVK ++YG G  + A      G 
Sbjct: 1   MKTQPFEKHVWAEIDLDALRHNFRAVKARAGDLPLCAVVKADSYGHGAVQCARVFAQEGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V+ + E V+LR       I +L  + P   + +   ++     S  Q    S    
Sbjct: 61  AWLAVSCLTEAVQLRQDGQTLPILILGHVQPEYAQTLIHEDITVACYSTEQAQNLSAAAV 120

Query: 117 SCGVSHPYALQVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
             G      L+ DTG  R+G         A+            +++ +  H + ADD + 
Sbjct: 121 KAGGRVKIHLKADTGMGRIGFALRTDFDAAIREMLAVCELPGLEMTGLFQHFSVADDTAE 180

Query: 173 H---VNSVQLERF-----RTLISHYKGIEASLASSSGILLGPNYH------FQLTRPGIS 218
                 + Q   F         +  +       +S+G++L P++         + RPGI 
Sbjct: 181 ENVAYTAEQHALFVRAFHALKAAGREPQTVHCDNSAGVMLHPDWPEGLARERCMARPGII 240

Query: 219 LYGGTDKINKSHPMQTV-VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           LYG               +T +  + ++++   G+  SYG +    + +L+A    GYAD
Sbjct: 241 LYGYDPSDEVRFGQFRPVMTLKTVVSMVKEMQPGQSASYGRRFTADKPTLVATLCTGYAD 300

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP  LS             G   I G   P+LG++ MD  M D+T    I  GD   ++
Sbjct: 301 GYPRQLS----------CGKGIVEIHGKACPVLGRVCMDQMMVDVTGIPDIHEGDEAILW 350

Query: 338 GPDI--KLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G  +    + +A  + T +Y++L  +  R  + Y
Sbjct: 351 GGSVSDTAETIARKTDTISYEVLCGVSRRVPRVY 384


>gi|193885202|pdb|2RJG|A Chain A, Crystal Structure Of Biosynthetic Alaine Racemase From
           Escherichia Coli
 gi|193885203|pdb|2RJG|B Chain B, Crystal Structure Of Biosynthetic Alaine Racemase From
           Escherichia Coli
 gi|193885204|pdb|2RJG|C Chain C, Crystal Structure Of Biosynthetic Alaine Racemase From
           Escherichia Coli
 gi|193885205|pdb|2RJG|D Chain D, Crystal Structure Of Biosynthetic Alaine Racemase From
           Escherichia Coli
 gi|193885206|pdb|2RJH|A Chain A, Crystal Structure Of Biosynthetic Alaine Racemase In D-
           Cycloserine-Bound Form From Escherichia Coli
 gi|193885207|pdb|2RJH|B Chain B, Crystal Structure Of Biosynthetic Alaine Racemase In D-
           Cycloserine-Bound Form From Escherichia Coli
 gi|193885208|pdb|2RJH|C Chain C, Crystal Structure Of Biosynthetic Alaine Racemase In D-
           Cycloserine-Bound Form From Escherichia Coli
 gi|193885209|pdb|2RJH|D Chain D, Crystal Structure Of Biosynthetic Alaine Racemase In D-
           Cycloserine-Bound Form From Escherichia Coli
          Length = 379

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 24  ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 82  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 141

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 142 XLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 201

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 202 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 260

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 261 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 309

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 310 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 369

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 370 TSRVAMKY 377


>gi|75676204|ref|YP_318625.1| alanine racemase region [Nitrobacter winogradskyi Nb-255]
 gi|74421074|gb|ABA05273.1| alanine racemase region [Nitrobacter winogradskyi Nb-255]
          Length = 395

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 182/365 (49%), Gaps = 11/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  A V+K +AYG G   +A AL  AG + FFV +++E 
Sbjct: 29  LTVDLDAIVANWRKLEKTAVPAECAGVIKADAYGCGARPVARALSAAGCRTFFVATLDEA 88

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R     A I+VL G            N  PVI  + +L  +       G +   A+ 
Sbjct: 89  RVVRAAASTADIYVLDGFFQNCGDAFATINCRPVIGDLNELAEWDVFCRRTGWAGGAAIH 148

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL+L EA        N     ++L++SHLACA+     +N+ Q+  FR +  
Sbjct: 149 IDTGMNRLGLTLDEAQGIL-PRINAGDHGVTLVMSHLACAESLHHPLNASQVAAFREIAR 207

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASLA+SSGI LG  Y F L RPG +LYG       ++PMQ V+  +ARII  R 
Sbjct: 208 QFSGVPASLANSSGIFLGAQYQFDLVRPGAALYGVNPTPEAANPMQPVIELKARIIQTRS 267

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R + +AV + GYADGY       D         G +  + G   
Sbjct: 268 IDRGESVGYGATWTARRPTRLAVVSAGYADGYFRAGGSNDGTR------GAEVVVAGTRC 321

Query: 308 PILGKITMDMTMFDITDSL---SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           P+ G+I+MD+   DITD      +  G    + G  I +D++A   GT  Y++L  +G R
Sbjct: 322 PVAGRISMDLLAVDITDLPAHAGVRRGHLATLIGEGITVDELAHHFGTIGYEVLTSLGGR 381

Query: 365 YAKFY 369
           Y + Y
Sbjct: 382 YHRIY 386


>gi|75765474|pdb|1XFC|A Chain A, The 1.9 A Crystal Structure Of Alanine Racemase From
           Mycobacterium Tuberculosis Contains A Conserved Entryway
           Into The Active Site
 gi|75765475|pdb|1XFC|B Chain B, The 1.9 A Crystal Structure Of Alanine Racemase From
           Mycobacterium Tuberculosis Contains A Conserved Entryway
           Into The Active Site
 gi|5759222|gb|AAD51033.1|AF172731_1 alanine racemase [Mycobacterium tuberculosis]
          Length = 384

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +G+A+  AVVK + YG G  ++A     AG  +  V +V
Sbjct: 11  LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATV 70

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   +SS+ Q       +   G +   
Sbjct: 71  DEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATV 130

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +                     ++SH+  AD P   +N VQ +R
Sbjct: 131 TVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQR 190

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F   ++  +        A L++SS  +  P+  F L RPGI++YG +         +   
Sbjct: 191 FTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPA 250

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  IGYADG   +L G          
Sbjct: 251 MTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRL-------- 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDI----KLDDVALAS 350
              +  I G   P +G+I MD  M D+      +  GD   +FGP I       D A   
Sbjct: 303 ---EVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 359

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 360 GTIHYEVVTSPRGRITRTY 378


>gi|161829951|ref|YP_001596838.1| alanine racemase [Coxiella burnetii RSA 331]
 gi|189027533|sp|A9ND48|ALR_COXBR RecName: Full=Alanine racemase
 gi|161761818|gb|ABX77460.1| alanine racemase [Coxiella burnetii RSA 331]
          Length = 364

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 23/370 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I++TALK+N   + AL+  +   A++K N YG G  ++A AL +A    F V  
Sbjct: 2   NRATATINVTALKHNLSQIKALAPKSLAWAMIKSNGYGHGLVRVAKALSDANA--FGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    ++ I V+ G +   E   F  + +  +          +  +   S   
Sbjct: 60  IDEALTLREVGIKSPIIVMKGFYNEAELSQFARHRLGAVIHCSDQVSLLEKTNLTSSLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG NRLG S++++    +    +  + +   +++HLA AD+ +     +Q++RF 
Sbjct: 120 WLKIDTGMNRLGFSVEQSPAVYNQLKTSSSIQKPIGLMTHLADADNENKTFTELQIKRFF 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--------INKSHPMQTV 235
           ++     G   S+ +S+G    PN      RPGI LYG +                 + V
Sbjct: 180 SVTEKMIG-PKSIVNSAGFFAYPNALVDWIRPGIILYGISPFGINYNSFKEKIEKKFRPV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A+II I+     + V YG     + D  IA+ +IGY DGYP               
Sbjct: 239 MTLSAKIIAIKNRRQNDSVGYGCTWSCSEDMPIAIVSIGYGDGYPRHA-----------P 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G + P++G+++MDM   D+    + +VGD + ++G  + ++ +A  +GT  Y
Sbjct: 288 SGTPVLLNGKICPLIGRVSMDMIAIDLRSQPNAQVGDDVILWGEGLPVEIIAEKAGTIAY 347

Query: 356 DLLVRIGTRY 365
           +LL +I  R 
Sbjct: 348 ELLCKITQRV 357


>gi|289668321|ref|ZP_06489396.1| alanine racemase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 366

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLEALRHNYRLAKQL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG          +  ++ V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFRQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGKVCPLIGRVSMDMLTVDLTDHPHADIGTPVQLWGDAPQVSPLAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|152987893|ref|YP_001351392.1| alanine racemase [Pseudomonas aeruginosa PA7]
 gi|150963051|gb|ABR85076.1| alanine racemase [Pseudomonas aeruginosa PA7]
          Length = 368

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      +G AR  AV+K +AYG G  + A AL       F V  
Sbjct: 13  RPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAGE-ADGFAVAC 70

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +  I +L G     E  +   +    +          +  S       
Sbjct: 71  IEEALELRAAGIREPILLLEGFFEAAELELIVAHDFWCVVHAAWQLEAIERASLARLLTV 130

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   ++                 +++SH + AD+        QL  F  
Sbjct: 131 WLKMDSGMHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTDEQLAAFAA 190

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +G E SL +S  +L  P       RPGI LYG T           ++ V+T E++
Sbjct: 191 ASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTLESK 249

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG +    R   I V A+GYADGYP                G   F
Sbjct: 250 VISVRELPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHA-----------PDGTLVF 298

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     +G  ++++GP++ +  +A   G+  Y LL  +
Sbjct: 299 IDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL 358

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 359 -KRVPRVYS 366


>gi|163847357|ref|YP_001635401.1| alanine racemase [Chloroflexus aurantiacus J-10-fl]
 gi|222525202|ref|YP_002569673.1| alanine racemase [Chloroflexus sp. Y-400-fl]
 gi|163668646|gb|ABY35012.1| alanine racemase [Chloroflexus aurantiacus J-10-fl]
 gi|222449081|gb|ACM53347.1| alanine racemase [Chloroflexus sp. Y-400-fl]
          Length = 816

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/375 (26%), Positives = 159/375 (42%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + +DLTA+ +N  ++   +G      V+K + YG G  ++A A   AG +   V +
Sbjct: 451 RPTWVHLDLTAIADNVRALRNHAG-VPLMVVLKGDGYGHGAARVARAALQAGAEMLAVAT 509

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHP 123
           + EG  LR     A I VL    P Q       +L+  +         ++  + CG    
Sbjct: 510 LGEGRALRAQGIAAPILVLGYTPPWQAAEAIRLDLMLTLFDDDTAQALHAAALECGRPAR 569

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VDTG  RLGLS  E   F          +   + +H A AD+        QL RF+
Sbjct: 570 VHVKVDTGMARLGLSPAEVAPFLSRLRELPGIEPVALYTHFARADEADPTPTEQQLARFQ 629

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQTVV 236
            +++       +      A+S+  L  P  HF + RPG++ YG            M+  +
Sbjct: 630 AVLADLTAAGLRPPCVHAANSAATLRFPATHFDMVRPGLACYGLAPGAAAPLLPGMRPAL 689

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +    +  ++   AG  +SYGG     R S IA   +GYADG   +              
Sbjct: 690 SFYTEVAQVKDHPAGTPISYGGTFVTARPSRIATIPVGYADGLRRSPPWR---------- 739

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I+G   PI+G+I MD  M D+TD   +  GD + I G      I +D++A   GT
Sbjct: 740 --EVLIRGQRAPIVGRICMDYAMVDVTDIPGVRRGDAVTIIGRQGDAVIGVDEIAGWLGT 797

Query: 353 TNYDLLVRIGTRYAK 367
            +Y++L  I  R  +
Sbjct: 798 ISYEVLTGILPRVPR 812


>gi|229029807|ref|ZP_04185878.1| Alanine racemase [Bacillus cereus AH1271]
 gi|228731522|gb|EEL82433.1| Alanine racemase [Bacillus cereus AH1271]
          Length = 408

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  IEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYIEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNAAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHAVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +++I  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKIAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|210612599|ref|ZP_03289390.1| hypothetical protein CLONEX_01592 [Clostridium nexile DSM 1787]
 gi|210151524|gb|EEA82531.1| hypothetical protein CLONEX_01592 [Clostridium nexile DSM 1787]
          Length = 388

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M +   +  KIDL A+  N   M   +    +  AV+K + YG G  +IA  +     + 
Sbjct: 1   MKTYSRVYAKIDLDAIAYNMEQMKQNIRPETKVMAVIKADGYGHGAVQIAEMMERWNYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F V +++E V LR    Q  I VL  + P Q   +    +   I +       S++   
Sbjct: 61  GFAVATLDEAVVLRTEGIQKPILVLGCVFPDQYMEMLKHEIRMNIYTEEMAESISRMAAR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    +++DTG +RLG  + E + +            +  I +H   AD+       
Sbjct: 121 EGKTAYMHIKLDTGMSRLGFGINEQSAETIKRISKMPNVNMEGIFTHFTKADEKDKSFTK 180

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH- 230
            Q++ F  +    K           ++S+GI+  P  +F + R GIS YG          
Sbjct: 181 KQIQEFVWMTERLKEKNVRFTYEHCSNSAGIIDVPEANFDIVRAGISTYGLYPSEEVDKT 240

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +  ++ +  +++   G  VSYGG         IA   +GYADGYP +LS    
Sbjct: 241 NVKLKPALALKSHVAFVKEIERGTPVSYGGTFVAKEKMKIATIPVGYADGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G   PILG++ MD  M D+T    +  GD + + G D    + ++
Sbjct: 298 --------KGYVLIRGKKAPILGRVCMDQFMVDVTQIEGVSFGDKVTMIGKDGNEILPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + Y
Sbjct: 350 VLSELSGRFNYEFVCDLGKRIPRVY 374


>gi|193885277|pdb|3B8U|A Chain A, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221a
 gi|193885278|pdb|3B8U|B Chain B, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221a
 gi|193885279|pdb|3B8U|C Chain C, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221a
 gi|193885280|pdb|3B8U|D Chain D, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant E221a
          Length = 379

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 24  ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 82  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 141

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 142 XLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 201

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 202 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLADRSTGADFGCQPVMSLTSS 260

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 261 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 309

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 310 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 369

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 370 TSRVAMKY 377


>gi|315925455|ref|ZP_07921666.1| alanine racemase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621356|gb|EFV01326.1| alanine racemase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 426

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 22/378 (5%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++     +I+L  + +N H++       A   AVVK +AYG G E +   L + GV    
Sbjct: 39  AHRPTWAEINLDNVVSNLHAIQKHVGPGAALIAVVKADAYGHGIELV-QTLQDEGVGRMA 97

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           V  ++E + LR         +L G+    Q   I + ++ P + S+      S+      
Sbjct: 98  VAFLDEAIALRQKGIDRCDIMLLGVTLTDQIPEIVEWDIEPTVDSLDFARALSEYAVKND 157

Query: 121 SHPYALQVD-TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                     TG  R+G    EA +            L  + +H A AD+       +Q+
Sbjct: 158 VVVNVHVKVDTGMGRIGFRWDEAAEAIAAMAELPGINLLGLFTHFATADEADKTFTQLQM 217

Query: 180 ERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           +R+  +          +      +S+ I+      F   RPGI LYG            P
Sbjct: 218 KRYLDVTRALNARGIQIPLKHVENSASIIDFGKTAFNAVRPGIILYGLYPSDEVKKAQLP 277

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T + RII ++   AG+   YG +     D  IA  A+GYADGY   LSG      
Sbjct: 278 LRPVMTFKTRIIHLKTVHAGDSCGYGRRFIAEGDRKIATLAVGYADGYTRMLSGK----- 332

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                G + +I G   P++G I MD  M D+TD     + D +++FG  + ++++A   G
Sbjct: 333 -----GAEVWIHGRRAPVVGNICMDQCMVDVTDVPEAALFDEVELFGEHLPVEELAEKLG 387

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+L+  +  R  + Y
Sbjct: 388 TINYELVCMVNKRVPRLY 405


>gi|258405606|ref|YP_003198348.1| alanine racemase [Desulfohalobium retbaense DSM 5692]
 gi|257797833|gb|ACV68770.1| alanine racemase [Desulfohalobium retbaense DSM 5692]
          Length = 390

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 158/388 (40%), Gaps = 34/388 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +IDL A+ +N   +    G   +  AVVK NAYG G  ++A A   AG     V 
Sbjct: 4   RPIWAEIDLEAIAHNISEIRNAVGFGPQIMAVVKANAYGHGAVEVAQASLRAGASWLGVA 63

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            V EG++LR     A I VL    P     +   +L   +S +      ++   +   + 
Sbjct: 64  RVAEGIELREAGIAAPILVLGTSPPECASELLAWDLRQTVSGLDDARALARHARNQDKTL 123

Query: 123 PYALQVDTGFNRLGL--------SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
              L+VDTG  RLGL            A +            L  I +H ACAD      
Sbjct: 124 QVHLKVDTGMGRLGLLAGPELGGDFDAAGEEVVAIQQLSGIALEGIFTHFACADSRDKSS 183

Query: 175 NSVQLERFRTLISHYKGIE------ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
            S Q +RF   +                A+S+ I+  P  H  L R GI LYG       
Sbjct: 184 ASRQWQRFTDFLETLDTRSLPRIPVRHAANSASIIDLPRTHLDLVRAGIMLYGLYPSAEV 243

Query: 229 SH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
            H    ++  +T +ARI  ++   AG  VSYG        + IA   +GYADGY   LS 
Sbjct: 244 DHAGVRLKPAMTVKARISQVKDVPAGFCVSYGSTYTTPAPTRIATVPVGYADGYTRLLSS 303

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----I 341
                           + G  VP++G++ MD T+ D+     +  GD + + G      +
Sbjct: 304 Q-----------AHMVVHGQRVPVVGRVCMDQTLLDVGGLPEVAAGDEVVLLGSQGEACV 352

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
             D++A  +GT NY+++  +  R  + +
Sbjct: 353 SADELAELTGTINYEIVSTLMARVPRIF 380


>gi|160931457|ref|ZP_02078853.1| hypothetical protein CLOLEP_00290 [Clostridium leptum DSM 753]
 gi|156869522|gb|EDO62894.1| hypothetical protein CLOLEP_00290 [Clostridium leptum DSM 753]
          Length = 396

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/386 (25%), Positives = 167/386 (43%), Gaps = 32/386 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++DL AL +N   + + ++ +A+   V+K + YG G   +A     AG   F V+
Sbjct: 6   KRTWAQVDLDALDHNIREIRSAIAPSAKLMCVIKADGYGHGAVPLAKESEAAGADWFAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
           ++EE  +LR    Q  I +L        +++    +   + S       S      G   
Sbjct: 66  NLEEAQELREAGIQKPILILGFTPDSDARLLAQMEISQAVLSESHARQLSSYAQEAGTRV 125

Query: 123 PYALQVDTGFNRLGLSLQE------ALDFTHNSFNKKLGQLSLIISHLACADDPS--SHV 174
              + VDTG  R+GLS Q       A              L  + +H A AD+    +  
Sbjct: 126 RVHIAVDTGMTRIGLSAQNQTQALEAAAAARRIAELPGLLLEGLFTHFAVADEAEAGADY 185

Query: 175 NSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-- 227
              Q + FR +    KG          ++S+GIL  P  +F L R GI LYG        
Sbjct: 186 TKRQYQSFRLVADTLKGWGISIPFCHCSNSAGILDYPEMNFNLVRAGIILYGLEPSSKVR 245

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   ++ ++  ++ + +++    G  VSYG      R++ IA   IGYADGYP  LS L 
Sbjct: 246 RPLDLRPLMELKSVVSMVKTVGPGVDVSYGRTYTTRRETKIATVPIGYADGYPRALSNL- 304

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                     G+  ++G    I+G++ MD  M D+T    +E GD + +FG D    + +
Sbjct: 305 ----------GEMLVRGQRARIIGRVCMDQLMLDVTHIPDVEEGDVVTVFGRDGGAFLPV 354

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           ++V+    T NY+ + +I  R  + Y
Sbjct: 355 EEVSSLDQTINYETVCQITKRVPRIY 380


>gi|228945715|ref|ZP_04108062.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228813936|gb|EEM60210.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 408

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAATEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|323975315|gb|EGB70418.1| alanine racemase [Escherichia coli TW10509]
          Length = 359

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAETFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     R++ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERNTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|255523385|ref|ZP_05390354.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|296184669|ref|ZP_06853080.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|255512843|gb|EET89114.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|296050451|gb|EFG89874.1| alanine racemase [Clostridium carboxidivorans P7]
          Length = 386

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/384 (27%), Positives = 168/384 (43%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N     +++DL  L  N  S+   S +     VVK +AYG G  ++AP L   G   
Sbjct: 1   MFRNFRSTWVEVDLDNLTYNMKSIRKKSKSKELIGVVKADAYGHGALEVAPVLLENGATR 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  + EG++LR       I +L          + + ++ P ++S    +  SK     
Sbjct: 61  LAVAVLSEGIELRKSGISCHIMILGLTPNTLMDDLLEYDIEPAVTSYEYASELSKAAQAK 120

Query: 120 -VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + VDTG  R+G    +++++  +        ++  + SH   AD+     +  
Sbjct: 121 DKVAKIHVAVDTGMGRIGFLPNEDSIEEVYKISKLPNIEIESLFSHFCTADELDKDYSHK 180

Query: 178 QLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q E++       +          +A+S+ I+  P  H++  RPGI LYG          M
Sbjct: 181 QFEKYNYFCEKLQEKGVKINMRDIANSAAIMELPETHYEGARPGIILYGYYPSTEVDKKM 240

Query: 233 ---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              + V+T +A I+ I+    GE + YG + +  R S+IA   +GYADGY   LSG    
Sbjct: 241 LDIKPVMTWKADIMHIKTLEKGEYIGYGRKFRTERKSVIATLPVGYADGYTRMLSG---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDD 345
                    K  I G   P++G I MD  M DIT+   ++VGD + + G D      +DD
Sbjct: 297 -------KAKVIINGKFAPVVGNICMDQCMIDITEIEDVKVGDEVILMGSDGTLKFDVDD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+LL  I  R  + Y
Sbjct: 350 MAPMLGTINYELLCMISKRVPRVY 373


>gi|114564506|ref|YP_752020.1| alanine racemase [Shewanella frigidimarina NCIMB 400]
 gi|122298735|sp|Q07XT3|ALR_SHEFN RecName: Full=Alanine racemase
 gi|114335799|gb|ABI73181.1| alanine racemase [Shewanella frigidimarina NCIMB 400]
          Length = 372

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 29/377 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPAL-----------Y 53
            F R +I   AL++N   +  ++ N++  AVVK N YG G   +A  +           Y
Sbjct: 3   PFPRAEISRYALQSNLAQLRLIAPNSKIMAVVKANGYGHGLLNVAECVGLLNYVESVCKY 62

Query: 54  NAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFY 112
           + G   F +  +EE ++LR    + ++ +L G         +   N+  V+    QL   
Sbjct: 63  HGGADGFGLARLEEALQLREGGVKGKLLLLEGFFRQSDLPTLVSHNIDTVVHHESQLQML 122

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPS 171
             +          +++DTG +R+G SL++            ++ +   +++H ACAD+P 
Sbjct: 123 ETIA-LDKPVTVWIKIDTGMHRIGFSLEQFNSIYQRLLACPQVAKPIHLMTHFACADEPD 181

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--- 228
           + +   Q+  F   +S  +G + +LA+S+G L  P       RPGI+LYG +  +     
Sbjct: 182 NPLTQTQMNAFEQQVSGLEG-DRTLANSAGTLFWPTSQADWVRPGIALYGVSPVVGDRGV 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +H +   +   + +I +R+  AG+ V YG      +D+ + V AIGY DGYP        
Sbjct: 241 NHRLIPAMELVSNLIAVREHKAGDSVGYGASWTAKKDTRLGVVAIGYGDGYPRNA----- 295

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
                   G   +I G  VPI+G+++MDM   D+       VGD +Q++G  + +++VA 
Sbjct: 296 ------PEGTPVWINGRRVPIVGRVSMDMLTVDLGADAQDNVGDSVQLWGKALAVEEVAE 349

Query: 349 ASGTTNYDLLVRIGTRY 365
             GT  Y+L+ ++  R 
Sbjct: 350 HIGTIAYELVTKLTPRV 366


>gi|82546378|ref|YP_410325.1| alanine racemase [Shigella boydii Sb227]
 gi|187732519|ref|YP_001882723.1| alanine racemase [Shigella boydii CDC 3083-94]
 gi|20137402|sp|Q932V0|ALR1_SHIDY RecName: Full=Alanine racemase, biosynthetic
 gi|123558063|sp|Q31TW1|ALR_SHIBS RecName: Full=Alanine racemase
 gi|226711059|sp|B2TX62|ALR_SHIB3 RecName: Full=Alanine racemase
 gi|16610215|dbj|BAB71770.1| alanine racemase [Shigella dysenteriae]
 gi|16610219|dbj|BAB71772.1| alanine racemase [Shigella flexneri]
 gi|81247789|gb|ABB68497.1| alanine racemase 1 [Shigella boydii Sb227]
 gi|187429511|gb|ACD08785.1| alanine racemase [Shigella boydii CDC 3083-94]
 gi|320174482|gb|EFW49622.1| Alanine racemase, biosynthetic [Shigella dysenteriae CDC 74-1112]
 gi|320185265|gb|EFW60041.1| Alanine racemase, biosynthetic [Shigella flexneri CDC 796-83]
 gi|332087804|gb|EGI92930.1| alanine racemase [Shigella boydii 3594-74]
          Length = 359

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|229155693|ref|ZP_04283799.1| Alanine racemase [Bacillus cereus ATCC 4342]
 gi|228627679|gb|EEK84400.1| Alanine racemase [Bacillus cereus ATCC 4342]
          Length = 408

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMIRVGIGIYGMYPSKEVDHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATIPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|289523438|ref|ZP_06440292.1| alanine racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503130|gb|EFD24294.1| alanine racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 362

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 150/370 (40%), Gaps = 24/370 (6%)

Query: 13  LTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           L  L++N+  + +      +  +VVK N YG+G   IA AL  AG Q F V + +E V L
Sbjct: 3   LENLRHNFDKIKSFVGPRVQVMSVVKANGYGMGIVPIAKALEEAGCQRFAVATPDEAVAL 62

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQVDT 130
           R    +  + VL            D ++   ++               G      +++DT
Sbjct: 63  REAGIKEPLLVLGPSPIEAAGYYVDHDVAAALTDMEFACAASRVAEEKGKVAQLHVKIDT 122

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS--H 188
           G  R+G   +E               +  I +H A AD+P+   +  Q  RF   +    
Sbjct: 123 GMGRIGFLPEELPHILPKLKGLSCIDIEGIFTHFATADEPNLEYSRWQFRRFMKALDILA 182

Query: 189 YKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--TVVTAEARII 243
             GI+     + +S+GIL  P YH    RPG+ LYG     +   P     V   +  + 
Sbjct: 183 DFGIKVRLRHVCNSAGILNLPEYHLDAVRPGLILYGMWPSDSCRKPFDLKKVFQIKTEVA 242

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R    G  V YG +     +  IAV  +GY DGYP  LS   S             IK
Sbjct: 243 ALRTLPLGSGVGYGLRYMTRGEEKIAVLPVGYHDGYPRVLSMRAS-----------VLIK 291

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLV 359
           G   PI+G I MD  M ++T    ++V D   + G     ++  +++A   GT NY++  
Sbjct: 292 GIRAPIVGNICMDQMMVNVTHIPDVKVKDEAVLIGAQGDEEVTTEEIAKIIGTINYEVPN 351

Query: 360 RIGTRYAKFY 369
               R  + Y
Sbjct: 352 LFTPRVPRVY 361


>gi|313109932|ref|ZP_07795860.1| biosynthetic alanine racemase [Pseudomonas aeruginosa 39016]
 gi|310882362|gb|EFQ40956.1| biosynthetic alanine racemase [Pseudomonas aeruginosa 39016]
          Length = 363

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+++N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHD-DADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R     ARI +L G     E  +     + ++    +           +    
Sbjct: 61  LEEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     +    +   +ISH ACAD+ +  +   QLE F  
Sbjct: 121 WLKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHFACADERNHPLTEQQLESFLG 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+      + SLA+S+ +L  P  H    RPGI LYG T   + S     ++  ++  A+
Sbjct: 181 LLDLDFD-QRSLANSAAVLTIPAAHMDWLRPGIMLYGSTPLADLSAAELGLRPAMSLGAQ 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R + I   + GYADGYP            +   G    
Sbjct: 240 LISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPR-----------TAPAGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   D++D     VGD ++++G  + +D+VA A GT  Y+LL ++
Sbjct: 289 VGGRRATLAGRVSMDMLAVDLSDLPEARVGDPVELWGAGLSVDEVARACGTLGYELLSKV 348

Query: 362 GTRYAK 367
           G R  +
Sbjct: 349 GARVPR 354


>gi|319776471|ref|YP_004138959.1| alanine racemase [Haemophilus influenzae F3047]
 gi|329123976|ref|ZP_08252524.1| alanine racemase [Haemophilus aegyptius ATCC 11116]
 gi|317451062|emb|CBY87295.1| alanine racemase 1, PLP-binding, biosynthetic [Haemophilus
           influenzae F3047]
 gi|327467720|gb|EGF13215.1| alanine racemase [Haemophilus aegyptius ATCC 11116]
          Length = 360

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L  + V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQS-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGIALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQIYRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|61218413|sp|P0A4X2|ALR_MYCTU RecName: Full=Alanine racemase
 gi|61218415|sp|P0A4X3|ALR_MYCBO RecName: Full=Alanine racemase
          Length = 386

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 160/379 (42%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +G+A+  AVVK + YG G  ++A     AG  +  V +V
Sbjct: 13  LAEAMVDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   +SS+ Q       +   G +   
Sbjct: 73  DEALALRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATV 132

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +                     ++SH+  AD P   +N VQ +R
Sbjct: 133 TVKVDTGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F   ++  +        A L++SS  +  P+  F L RPGI++YG +         +   
Sbjct: 193 FTAFLAQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  IGYADG   +L G          
Sbjct: 253 MTVKCAVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRL-------- 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDI----KLDDVALAS 350
              +  I G   P +G+I MD  M D+      +  GD   +FGP I       D A   
Sbjct: 305 ---EVLINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLV 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 362 GTIHYEVVTSPRGRITRTY 380


>gi|297528581|ref|YP_003669856.1| alanine racemase [Geobacillus sp. C56-T3]
 gi|297251833|gb|ADI25279.1| alanine racemase [Geobacillus sp. C56-T3]
          Length = 384

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 154/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++IDL A+ +N  ++        +  AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWVEIDLDAIYDNVANLRRFLPEGTQIMAVVKANAYGHGDAQVAATALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR     A I VL    P    +  +  +   +     L   S L +     
Sbjct: 65  AFLDEALALRKKGIDAPILVLGASRPEDVALAAEHRIALTVFRSDWLEKASSLYNGSTPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLKMDTGMGRLGVKDEEETKRIAALIDRHPPFVLEGVYTHFATADEVNTDYFSYQYAR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L   +  F + R GIS+YG     +      + ++  
Sbjct: 185 FLHMLDWLPSRPPLVHCANSAAALRFSDRAFNMVRFGISMYGLAPSPDIKPLLPYELKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  + + L +  G  + + G      I +DDVA   G
Sbjct: 296 ---HVLVGGQRAPIVGRICMDQCMIRLPEPLPV--GTKVTLIGRQGDEVISIDDVARHLG 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|145631023|ref|ZP_01786799.1| alanine racemase [Haemophilus influenzae R3021]
 gi|144983490|gb|EDJ90966.1| alanine racemase [Haemophilus influenzae R3021]
          Length = 360

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|56418766|ref|YP_146084.1| alanine racemase [Geobacillus kaustophilus HTA426]
 gi|81819823|sp|Q5L3G4|ALR_GEOKA RecName: Full=Alanine racemase
 gi|56378608|dbj|BAD74516.1| alanine racemase [Geobacillus kaustophilus HTA426]
          Length = 384

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 155/378 (41%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++IDL A+ +N  ++        +  AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWVEIDLDAIYDNVANLRRFLPEGTQIMAVVKANAYGHGDAQVAATALEAGASRLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR     A I VL    P    +  +  +   +     L   S L +     
Sbjct: 65  AFLDEALALRKKGIDAPILVLGASRPEDVALAAEHRIALTVFRSDWLEKASSLYNGSTPI 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 125 HFHLKMDTGMGRLGVKDEEETKRIAALIDRHPPFVLEGVYTHFATADEVNTDYFSYQYAR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L   +  F + R GIS+YG     +      + ++  
Sbjct: 185 FLHMLDWLPSRPPLVHCANSAAALRFSDRAFNMVRFGISMYGLAPSPDIKPLLPYELKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  + + L +  G  + + G      I +DDVA   G
Sbjct: 296 ---HVLVGGQRAPIVGRICMDQCMIRLPEPLPV--GTKVTLIGRQGDEVISIDDVARHLG 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   IG R  + +
Sbjct: 351 TINYEVPCTIGYRVPRIF 368


>gi|269103593|ref|ZP_06156290.1| alanine racemase biosynthetic [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163491|gb|EEZ41987.1| alanine racemase biosynthetic [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 359

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 176/371 (47%), Gaps = 22/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL +N   +   + N++  AVVK NAYG G   +A +L    V  +    +E
Sbjct: 4   ATAHIDTEALTHNLRQLRTQAPNSKILAVVKANAYGHGLLHVAKSLPT--VDAYGAARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G + P    ++   N+  V+ S+ QL    +    G      
Sbjct: 62  EALTLRAGGIVKPILLLEGFYSPSDLPVLVTNNIHTVVHSIEQLEALEQAKLDG-PVVVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L++DTG +RLG+  ++  +F         + +    ISH  CADD  S V + QLE F  
Sbjct: 121 LKIDTGMHRLGVRPEQIDEFITRLHACHNVAKPLRYISHFGCADDLQSDVTNQQLETFLA 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTAE 239
           L     G E SLA+S+G+L  P+ H +  RPGI +YG +           + ++ V+T  
Sbjct: 181 LTEGCTG-ERSLAASAGVLAWPDSHLEWIRPGIVMYGISPFAEPEMSASAYNLKPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +R    GE V YGG     RD+ + V AIGY DGYP +              G  
Sbjct: 240 SSLIAVRDVKKGEQVGYGGNWTSERDTKVGVIAIGYGDGYPRSAPN-----------GTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VP+ G+++MDM   D+      +VGD   ++G  +  + VA   GT  Y+L+ 
Sbjct: 289 ILVNGRIVPMAGRVSMDMLTVDLGPDAQDKVGDEAILWGNGLPAEVVAEHIGTIAYELVT 348

Query: 360 RIGTRYAKFYT 370
           ++ +R A  YT
Sbjct: 349 KLTSRVAMTYT 359


>gi|298245711|ref|ZP_06969517.1| alanine racemase [Ktedonobacter racemifer DSM 44963]
 gi|297553192|gb|EFH87057.1| alanine racemase [Ktedonobacter racemifer DSM 44963]
          Length = 870

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 160/384 (41%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + +     ++IDL+A+ NN   +  +     +    +K +AYG G  K+A  + + G   
Sbjct: 497 LQTERPTWVEIDLSAIGNNVRKIREIVGPGVQILISLKADAYGHGALKVARTVLHNGASM 556

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD-TNLIPVISSVPQLTFYSKLMSC 118
             V ++ E   LR     A I +   +   Q +        I + SS           + 
Sbjct: 557 LGVATLSEAAALREAGIDAPILIFGYVPYWQMREAVRLDVTITLYSSESAQALARAAQAL 616

Query: 119 GVSHPYALQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             S    ++VDTG  RLG+     +E L     +   +  ++  I +H A AD       
Sbjct: 617 RQSVRVHIKVDTGMGRLGIRSEQAEEILALVREAGELEGLEVEGIYTHFASADADDKTYA 676

Query: 176 SVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             QL RF+ ++     +         A+S+  L  P  HF + RPGI++YG         
Sbjct: 677 HTQLARFQHILELLERAEICPPVVHAANSAATLSLPEAHFNMVRPGIAIYGLDPSEEVRV 736

Query: 231 PMQTV--VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           P      ++ + +I  ++   AGE +SYG      R + IAV  +GYADG+       +S
Sbjct: 737 PDGFKAALSFKTQIAQVKMIPAGECISYGCTYVTERPTRIAVLPVGYADGFRRAPRNWES 796

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                        + G   P++G+I MD  M D++    + +GD + + G     ++  +
Sbjct: 797 -----------VLVHGQEAPLIGRICMDQCMIDVSAIPQVRMGDEVVLIGRQGKAELTAE 845

Query: 345 DVALASGTTNYDLLVRIGTRYAKF 368
           ++A   GT NY+++  I  R  + 
Sbjct: 846 EIARRLGTINYEVVAEILARVPRV 869


>gi|209522716|ref|ZP_03271274.1| alanine racemase [Arthrospira maxima CS-328]
 gi|209496765|gb|EDZ97062.1| alanine racemase [Arthrospira maxima CS-328]
          Length = 399

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 169/384 (44%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +++D  A+ NN   +  L S   R  AV+K +AYG G   +A  +   GV DF V 
Sbjct: 24  HRAWVEVDRWAIANNVKQIRHLLSPETRLMAVIKADAYGHGAVSVAKIVSEIGVDDFAVA 83

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
           ++ EG++LR    Q  I VL  +H   E        +      P         L S   S
Sbjct: 84  TIPEGIELRRLGIQQPILVLGAVHTSDEIKAIAHWGLQPTLCTPTQALLFSETLQSIKRS 143

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  L +DTG +RLG   ++AL+F          ++S I SH A AD     +   Q  R
Sbjct: 144 LPVQLNIDTGMSRLGTWWEQALEFVQLVRGLPNLEISGIYSHFATADIRDRTIMDQQHWR 203

Query: 182 FRTLISHYKGIEA-----------SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           F+ +++  +                LA+S+  L  P  H+ + R G+SLYG     +   
Sbjct: 204 FQQVLAQIQEHTTLFSIPTVKPCLHLANSAATLTDPALHYDMVRVGLSLYGLYPAPHLRS 263

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +Q  ++  AR+  I+   AG  VSYG +    + + IAV  IGYADG P  LS    
Sbjct: 264 VVNLQPAMSIRARVTQIKTIEAGCGVSYGYKFIAKQKTPIAVVGIGYADGVPRHLSNQM- 322

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                     K  I+G  VP +G ITMD  M D+T    ++VG+ + + G D    I  D
Sbjct: 323 ----------KVLIRGQFVPQIGAITMDQLMLDVTAIPDLQVGEVVTLLGSDRHHSISAD 372

Query: 345 DVALASGTTNYDLLVRIGTRYAKF 368
           D A   GT ++++L     R  + 
Sbjct: 373 DWAEQLGTISWEILCGFKHRLPRI 396


>gi|117617805|ref|YP_855561.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117559212|gb|ABK36160.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 357

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 18/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +I+  AL++N   +   +   +  AVVK NAYG G   +A  L +     + V  +EE 
Sbjct: 6   AQINTAALRHNLAVVKRHAPQCKIIAVVKANAYGHGLLPVARTLVD--ADAYAVARIEEA 63

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR       I +L G     +  +   N +       +     +           L++
Sbjct: 64  LMLRSCAVVKPIVLLEGFFSAADLPVLAANNLQTAVHTWEQLEALEQADLPAPVVAWLKL 123

Query: 129 DTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG +RLG+   E   F       K + Q   I++H + +D+        Q++ F  L +
Sbjct: 124 DTGMHRLGVRADEMPAFIERLAKCKNVVQPFNIMTHFSRSDELEQPTTREQIDLFSQLTA 183

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIIL 244
              G E ++A+S+GIL  P+ H    RPG+ LYG +   N     + +Q V+T + ++I 
Sbjct: 184 PLLG-ERAMANSAGILAWPDSHCDWVRPGVILYGVSPFPNTVAADYDLQPVMTLKTQLIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R   AGE V YG      RD+ + V AIGY DGYP                G    + G
Sbjct: 243 VRDHKAGEPVGYGANWVSDRDTRLGVIAIGYGDGYPRMAPN-----------GTPVLVNG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +VP++G+++MDMT  D+    + + GD   ++G  + ++ VA   GT  Y+L+ ++ +R
Sbjct: 292 RIVPLVGRVSMDMTTVDLGPGATDKAGDEAVLWGEGLPVERVADQIGTIPYELITKLTSR 351

Query: 365 YAKFY 369
               Y
Sbjct: 352 VFMEY 356


>gi|330445019|ref|ZP_08308673.1| alanine racemase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328493137|dbj|GAA03170.1| alanine racemase [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 359

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 114/371 (30%), Positives = 179/371 (48%), Gaps = 22/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL +N   +   + N++  AVVK NAYG G  ++A +L N  V  + V  +E
Sbjct: 4   ATAHIDTDALAHNLGLIRQQAPNSKILAVVKANAYGHGLLRVAQSLTN--VDAYGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G + P    ++   N+  V+ S+ QL    +           
Sbjct: 62  EALMLRAGGVVKPILLLEGFYAPSDLPVLVTNNIHTVVHSIEQLEALEQ-AELDSQVKVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG +RLG+  ++  DF    +  + + +    ISH   ADD SS +   QL+ F  
Sbjct: 121 VKIDTGMHRLGVRPEDLTDFMARLNACENVAKPLRFISHFGNADDLSSDITLQQLDTFLN 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTAE 239
           L   Y+G E SLA+S+G+L  P+   +  RPGI +YG +           + ++ V+T  
Sbjct: 181 LTQDYQG-ERSLAASAGVLAWPDSQLEWIRPGIIMYGVSPFNEPERYASAYDLKPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +R    GE V YGG     RD+ + V AIGY DGYP +              G  
Sbjct: 240 SSIIAVRDVKKGEKVGYGGIWTSERDTKMGVIAIGYGDGYPRSAPN-----------GTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VP+ G+++MDM   D+      +VGD   ++G  +  + VA   GT  Y+L+ 
Sbjct: 289 VLVNGRIVPMAGRVSMDMLTVDLGPDAQDKVGDTAILWGEGLPAEIVAEHIGTIAYELIT 348

Query: 360 RIGTRYAKFYT 370
           ++  R A  YT
Sbjct: 349 KLTPRVAMAYT 359


>gi|58257634|dbj|BAD88778.1| alanine racemase [synthetic construct]
          Length = 359

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 107/368 (29%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                      +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEGQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ VA  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERVAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|237809465|ref|YP_002893905.1| alanine racemase [Tolumonas auensis DSM 9187]
 gi|237501726|gb|ACQ94319.1| alanine racemase [Tolumonas auensis DSM 9187]
          Length = 358

 Score =  290 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +ID  AL++N   + +    N +  AVVK NAYG G  ++A  L  A    + V  +
Sbjct: 4   ATAQIDTQALQHNLAVVRSQIPANTKVVAVVKANAYGHGLIQVAKTL--ASADAYAVARL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE + LR       I +L G     +  +   N I       +     + M         
Sbjct: 62  EEALILRSSGIVKPIIMLEGFFSADDLPVLAANNIQTAVHSVEQLDALEQMQLPNPVTVW 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLII-SHLACADDPSSHVNSVQLERFRT 184
           L++DTG +RLG+  +EA +F     N +         +H + AD+  +   + Q+E F  
Sbjct: 122 LKLDTGMHRLGVRPEEAEEFCERLANCRNVVQPFNFITHFSRADELDNLATTKQIELFNQ 181

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
           L   Y G E SLASS+GI+   + H    RPGI LYG +  + K    H +Q V+T +  
Sbjct: 182 LTQKYAG-ECSLASSAGIMEWHDAHADWIRPGIMLYGASPFLGKTGYDHGLQPVMTLKTS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V YG +    +D+ + V AIGY DGYP                G    
Sbjct: 241 LIAVRLVKQGEPVGYGAKWVAQQDTKVGVVAIGYGDGYPRMA-----------PSGVPVR 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VP++G+++MDM   D+    + +VGD + ++G  + ++ VA A GT  Y+L+ ++
Sbjct: 290 VNGRIVPLVGRVSMDMLTVDLGPDATDKVGDDVTLWGEGLPVETVAEAIGTIPYELITKL 349

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 350 TPRVIMEY 357


>gi|301170339|emb|CBW29945.1| alanine racemase 1, PLP-binding, biosynthetic [Haemophilus
           influenzae 10810]
          Length = 360

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L  + V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQS-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKELPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|90581360|ref|ZP_01237156.1| alanine racemase [Vibrio angustum S14]
 gi|90437470|gb|EAS62665.1| alanine racemase [Vibrio angustum S14]
          Length = 359

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 115/371 (30%), Positives = 178/371 (47%), Gaps = 22/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL +N   +   + N++  AVVK NAYG G  ++A  L N  V  + V  +E
Sbjct: 4   ATAHIDTEALAHNLGLIRQHAPNSKVLAVVKANAYGHGLLRVAQTLSN--VDAYGVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G + P    ++   N+  V+ S+ QL    +           
Sbjct: 62  EALILRAGGIVKPILLLEGFYAPSDLPVLVTNNIHTVVHSIEQLEALEQTELDN-PVQVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG +RLG+  ++  DF    +  + + +    ISH   ADD SS +   QL+ F  
Sbjct: 121 VKIDTGMHRLGVRPEDLTDFMARLNACENVAKPLRFISHFGNADDLSSDITLKQLDTFLD 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTAE 239
           L   Y+G E SLA+S+GIL  P+   +  RPGI +YG +           + ++ V+T  
Sbjct: 181 LTQDYQG-ERSLAASAGILAWPDSQLEWIRPGIIMYGVSPFNESERFASAYDLKPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +R    GE V YGG     RD+ + V AIGY DGYP T              G  
Sbjct: 240 SSLIAVRDVKKGEQVGYGGIWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VP+ G+++MDM   D+      +VGD   ++G  +  + VA   GT  Y+L+ 
Sbjct: 289 VLVNGRIVPMAGRVSMDMLTVDLGPDAQDKVGDTATLWGEGLPSEIVAEHIGTIAYELVT 348

Query: 360 RIGTRYAKFYT 370
           ++  R A  YT
Sbjct: 349 KLTPRVAMAYT 359


>gi|308406153|ref|ZP_07495313.2| alanine racemase alr [Mycobacterium tuberculosis SUMu012]
 gi|308364367|gb|EFP53218.1| alanine racemase alr [Mycobacterium tuberculosis SUMu012]
          Length = 370

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/374 (26%), Positives = 160/374 (42%), Gaps = 26/374 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+++N   +   +G+A+  AVVK + YG G  ++A     AG  +  V +V+E + 
Sbjct: 2   VDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALA 61

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQVD 129
           LR     A +                 ++   +SS+ Q       +   G +    ++VD
Sbjct: 62  LRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVD 121

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRTLI 186
           TG NR G+   +                     ++SH+  AD P   +N VQ +RF   +
Sbjct: 122 TGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFL 181

Query: 187 SHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTAEA 240
           +  +        A L++SS  +  P+  F L RPGI++YG +         +   +T + 
Sbjct: 182 AQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKC 241

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + L++   AGE VSYG      RD+ +A+  IGYADG   +L G             + 
Sbjct: 242 AVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGYADGVFRSLGGRL-----------EV 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDI----KLDDVALASGTTNY 355
            I G   P +G+I MD  M D+      +  GD   +FGP I       D A   GT +Y
Sbjct: 291 LINGRRCPGVGRICMDQFMVDLGPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHY 350

Query: 356 DLLVRIGTRYAKFY 369
           +++     R  + Y
Sbjct: 351 EVVTSPRGRITRTY 364


>gi|315287851|gb|EFU47253.1| alanine racemase [Escherichia coli MS 110-3]
          Length = 359

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINHRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|317133520|ref|YP_004092834.1| alanine racemase [Ethanoligenens harbinense YUAN-3]
 gi|315471499|gb|ADU28103.1| alanine racemase [Ethanoligenens harbinense YUAN-3]
          Length = 393

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 167/384 (43%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++DL  ++ N+ ++ A +S  ++   +VK + YG G   +A A  +AG   F V+
Sbjct: 6   KRTWAEVDLDKIEANYLAIRAYVSPQSKIMTIVKADGYGHGAPFVAKAFDDAGTDWFGVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
           ++EE  +LR+   +  I +L    P    ++    +   + S+       +     G + 
Sbjct: 66  NIEEAEQLRIAGIEKPILILGYTPPEFAGMLIKQRVTQTLFSMEYGEQLSAAAKEAGGTV 125

Query: 123 PYALQVDTGFNRLGL---SLQEALDFTHNS---FNKKLGQLSLIISHLACADDPSSHVNS 176
              L++DTG +R+G      ++A     +          ++  + +H A +D+P +    
Sbjct: 126 DVHLKLDTGMSRIGFLFHGEEDAPALLQDGAAAAALPNLRIDGVFTHFAVSDEPGNPFTR 185

Query: 177 VQLERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q ERF   ++    +G+        +S+G+L  P     + RPGI LYG T  +    P
Sbjct: 186 TQFERFIRAVALLEEQGLRFSLRHCCNSAGLLNYPEMQLDMVRPGIILYGLTPAVGMPLP 245

Query: 232 M--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
           +  Q  +  +  +   +    G  VSYG   +      +    IGYADGY  +LS     
Sbjct: 246 IELQPAMALKTMLFQTKTLTPGTPVSYGMIYRTPSARRVGTLPIGYADGYARSLSDRAD- 304

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       I G    I+G++ MD  M D+TD  + + GD + + G D    + +++
Sbjct: 305 ----------VLIHGKRARIVGRVCMDQCMADVTDIPNAQSGDVVTVIGRDGGETVSMEE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+    IG R  + +
Sbjct: 355 IAAQMGTINYETACLIGKRVPRVF 378


>gi|163816712|ref|ZP_02208075.1| hypothetical protein COPEUT_02902 [Coprococcus eutactus ATCC 27759]
 gi|158447969|gb|EDP24964.1| hypothetical protein COPEUT_02902 [Coprococcus eutactus ATCC 27759]
          Length = 387

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M +   ++  I+L  +++N  +M +L   + +  AV+K +AYG G  ++A AL +  V  
Sbjct: 1   MRNYNRVQAVINLDNIRHNVAAMKSLVDKDKKMLAVIKADAYGHGAVEVAHALNDM-VDF 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
           F V  ++E ++LR    +  I +L    P   K++ D ++ P I  V      S+     
Sbjct: 60  FAVAFIDEAIELRNAGFKKPILILGYTDPEDYKLLIDFDVRPAIYDVDDARKLSETAVGK 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      ++VDTG  R+G S  +A +            ++  + +H A AD+        
Sbjct: 120 GAKAKIHIKVDTGMGRIGFSCDDAGVKHIEEISRMPGIEIEGMFTHYAKADELDKTAAKG 179

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           QL++FR +    +          +++S+GI+   N  F + R GI  YG          +
Sbjct: 180 QLDKFRWINRQLEDKHIYIPVRHISNSAGIMEMDNSDFDMVRSGIVTYGLYPSEEVDKSI 239

Query: 233 ---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              +  ++  +++I ++   AG  + YG       D  +A  + GYADGYP   S +   
Sbjct: 240 VDLRPAMSLTSKVIFVKDVKAGTGIGYGWSYIADHDIRVATVSAGYADGYPRAQSNI--- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G+  I G   PI+G++ MD  M D++    ++V D + + G      I +++
Sbjct: 297 --------GRVIIHGQYAPIIGRVCMDQFMVDVSHIDDVKVRDDVILIGRAGDKVITVEE 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA  + + NY+L+  I  R  + Y
Sbjct: 349 VAEPANSFNYELVCNISRRVPREY 372


>gi|302874151|ref|YP_003842784.1| alanine racemase [Clostridium cellulovorans 743B]
 gi|307689590|ref|ZP_07632036.1| alanine racemase [Clostridium cellulovorans 743B]
 gi|302577008|gb|ADL51020.1| alanine racemase [Clostridium cellulovorans 743B]
          Length = 386

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 160/384 (41%), Gaps = 26/384 (6%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   +  +I+L  L +N   +  ++      AVVK + YG G    +  L   G   
Sbjct: 1   MFKHIRPVWAEINLDNLAHNMREIKKITRAKDIIAVVKADGYGHGAIDTSKILLENGATA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
             V  + E V+LR    +  I +L          +   ++ P + +       S +    
Sbjct: 61  LAVAVISEAVELRRNGIKCPIMILGYTPTIYGDSLVKYDISPTVFTYEYAKELSDIAKAE 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  + +DTG  R+G      +++  +         +  I SH + +D+ +      
Sbjct: 121 DKIIKIQVALDTGMGRIGFMPDKNSVEEVYKISKLPNISIEGIFSHFSTSDEANKKFTLE 180

Query: 178 QLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP- 231
           QL+++   I +            +A+S+ I+   + HF+  R GI +YG       +   
Sbjct: 181 QLKKYEDFIHNLEERGINIKIRHIANSAAIIDLKDTHFEAVRSGIIMYGYYPSKEVNVSK 240

Query: 232 --MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T +  II ++K      +SYG   K  ++ +IA   +GYADGY   LS     
Sbjct: 241 LLLKPVMTLKTNIIHVKKLPKDYSISYGRTYKTQKEEIIATLPVGYADGYTRQLSD---- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                    +  I G + P++G+I MD  M ++TD   +++GD + + G      +  DD
Sbjct: 297 -------KAQVIINGKLAPVVGRICMDQCMVNVTDIDDVKIGDEVILMGQCDNVKMDADD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY+++  IG R  + Y
Sbjct: 350 IAGLLETINYEVVCMIGKRVPRVY 373


>gi|323965715|gb|EGB61167.1| alanine racemase [Escherichia coli M863]
 gi|327250397|gb|EGE62110.1| alanine racemase [Escherichia coli STEC_7v]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 169/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTRCKNVRQPVNIVSHFARADEPKCGATEKQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     R++ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERNTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|227505268|ref|ZP_03935317.1| alanine racemase [Corynebacterium striatum ATCC 6940]
 gi|227198167|gb|EEI78215.1| alanine racemase [Corynebacterium striatum ATCC 6940]
          Length = 363

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 164/371 (44%), Gaps = 21/371 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            LR +IDL A+ +N   +      A+   VVK +AYG G +++AP +  AG   F V ++
Sbjct: 1   MLRTRIDLDAIAHNVSLLKEKVAPAQLMCVVKADAYGHGVKEVAPVMAAAGADAFGVATL 60

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E V+LR       I         +        +   + S+         +   V+    
Sbjct: 61  DEAVELRRSGIDQPIAAWIWDSTDEVAEALACRIHIGVPSLTHARCL---VETEVAAKVY 117

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF--R 183
           ++V+TG +R G+   +  +      +    ++  ++SH ACAD+P +  N  Q   F   
Sbjct: 118 IKVETGLHRSGVDESDWDEVFALFRDAPQIEVLGLMSHFACADEPDNPFNDEQEATFRRA 177

Query: 184 TLISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
              +   G+E     LA+S  +L  P+ +F+L RPG++ YG      + H ++  +T  A
Sbjct: 178 IERARAAGLECPINHLANSPAVLDRPSAYFELVRPGLACYGLEPIPGRDHGLKPAMTWAA 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ ++   AGE  SYG      +   +A    GYADG P    G               
Sbjct: 238 SIVNVKPIEAGEATSYGQTWHAEKRGFLATVPCGYADGLPRDFQG-----------KLHV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLL 358
            I G + P +G++ MD  + D+ D    ++ GD   IFG   +    +A A+GT NY+++
Sbjct: 287 GIGGKLYPQVGRVCMDQIVVDLGDNEYGVQQGDEAIIFGVGGMSATALADAAGTINYEVI 346

Query: 359 VRIGTRYAKFY 369
            R   R  + Y
Sbjct: 347 CRPTGRSVRKY 357


>gi|148255205|ref|YP_001239790.1| putative alanine racemase (alr) [Bradyrhizobium sp. BTAi1]
 gi|146407378|gb|ABQ35884.1| putative alanine racemase (alr) [Bradyrhizobium sp. BTAi1]
          Length = 394

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 123/365 (33%), Positives = 179/365 (49%), Gaps = 11/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  A  A V+K +AYG G  ++A  L  AG + FFV ++ E 
Sbjct: 28  LTIDLDALAANWRKLEKTAVPAECAGVIKADAYGCGIPQVARTLAAAGCKTFFVATLSEA 87

Query: 69  VKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
              R   P  A ++VL G      +     N  PVI  + +L  +       G     A+
Sbjct: 88  KVARTALPDSAALYVLDGFFQNTGEDYAAINCRPVIGDLNELAEWDMFCRRTGWKGGAAI 147

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG NRLG +  +A              ++LI+SHLA A+  +S  N+ QL  FR + 
Sbjct: 148 HVDTGMNRLGFTPTDAQGMI-PRIQSGDHGITLIMSHLASAEQLNSPSNARQLSLFREVA 206

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           S + G+ A+LA+SSGI LG  + F + RPG +LYG        +PMQ V   +ARI+ +R
Sbjct: 207 SVFTGVPAALAASSGIFLGAAFQFDMVRPGAALYGINPTPEADNPMQPVAEIKARIVQLR 266

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V YGG     R + IA+ + GYADGY    S  D         G    I G  
Sbjct: 267 DLARGDTVGYGGTWTARRPTKIAILSAGYADGYFRAASSNDGTR------GADVVIAGQR 320

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            P+ G+++MD+   D+TD        G +  + G  I +D++A   GT  Y+++  +G R
Sbjct: 321 CPVAGRVSMDLIAVDVTDLPPKAARRGHFATLLGEGITVDELAHHFGTIGYEVMTNLGRR 380

Query: 365 YAKFY 369
           Y + Y
Sbjct: 381 YHRIY 385


>gi|58257636|dbj|BAD88779.1| alanine racemase [synthetic construct]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                      +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEGQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|320160719|ref|YP_004173943.1| alanine racemase [Anaerolinea thermophila UNI-1]
 gi|319994572|dbj|BAJ63343.1| alanine racemase [Anaerolinea thermophila UNI-1]
          Length = 370

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 26/380 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H++    L+IDL+ ++ N   +  ++G     AVVK NAYG G  + + A   AGVQ   
Sbjct: 3   HADLTTWLEIDLSVIRKNIRLLQEIAG-VPVMAVVKANAYGHGLIEASRAAVQAGVQWLG 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-NLIPVISSVPQLTFYSKLMSCGV 120
           V  ++E ++L     +A   VL    P +          + V  S     + ++  + G 
Sbjct: 62  VARIDEALELHRAGIRAHPIVLGYTPPERAGEAAQAGVRLAVYDSQVAQAYAAQAKAVGK 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                 + DTG  RLG S +E +++       +  Q+    +HLA ADDP       QL+
Sbjct: 122 PLYVHAKFDTGMGRLGASPEEGVEWMRWLHTLEGLQVEGAFTHLAEADDPQKPTTHWQLD 181

Query: 181 RFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQ 233
           RF  L+     +  +      A+S+G L  P   + L R GI++YG     +   P   +
Sbjct: 182 RFDKLLSGLESAGLRPAWVHAANSAGALYFPRARYNLVRTGIAIYGLNPSAHAPLPEGFR 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T + R+  ++       +SY  + +   +  I V A+GYADG+   +  +       
Sbjct: 242 PALTWKTRLTSVKIFPPNHGISYNYRYRTKSEERIGVCAVGYADGFRRQMGNM------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G  VP++G + MD  M ++      ++GD + + G     +I  ++ A  
Sbjct: 295 ------VLVRGRRVPVVGSVCMDQCMVNLDQVPEAQMGDEVVLIGQQGNDEITAEERAHE 348

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y+++  +  R  + Y
Sbjct: 349 WGTIHYEVVCGLANRLPRIY 368


>gi|260773727|ref|ZP_05882642.1| alanine racemase biosynthetic [Vibrio metschnikovii CIP 69.14]
 gi|260610688|gb|EEX35892.1| alanine racemase biosynthetic [Vibrio metschnikovii CIP 69.14]
          Length = 366

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 110/373 (29%), Positives = 176/373 (47%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +    +  IDL AL++N+  + +LSG  +  AV+K +AYG G  ++A AL       F
Sbjct: 1   MKT---AQASIDLIALRHNYLRLKSLSGQQKLIAVIKGDAYGHGAVQLAKAL--PMADWF 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  VEE  +L        + +L G     +        +  +    +     +  +   
Sbjct: 56  AVARVEEAEELIANGIDQPVLLLEGCFCADDLQRAADLKLATVIHCEEQLRDLEQSNLAN 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQL 179
                L++DTG +RLG+  ++  ++        KL      +SH +CADD S      Q+
Sbjct: 116 PISIWLKIDTGMHRLGVQPEQVTEYVQRIERSGKLKGQLGFMSHFSCADDLSHPATLKQI 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVV 236
           E F      Y G   SLA+S+GIL  P   F + R GI+LYG +  +      H +  V+
Sbjct: 176 ECFSQAAFPYSG-PKSLANSAGILFWPESQFNVARAGIALYGISPSLYHSGIDHQLLPVM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T   R+I +R+  A + V YG      RD+ I V A+GY DGYP +              
Sbjct: 235 TVTTRLIAVRQHTANQPVGYGETWYAKRDTKIGVIAMGYGDGYPRSA-----------PA 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   FI G  VPI+G+++MDM   D+      +VGD ++++G ++ ++ VA   GT  Y+
Sbjct: 284 GTPVFINGRQVPIVGRVSMDMITVDLGPDAMDKVGDSVEMWGKNLPVETVAKHIGTIPYE 343

Query: 357 LLVRIGTRYAKFY 369
           L +++  R A+ Y
Sbjct: 344 LTIKLTNRVARHY 356


>gi|153938703|ref|YP_001390994.1| alanine racemase [Clostridium botulinum F str. Langeland]
 gi|152934599|gb|ABS40097.1| alanine racemase [Clostridium botulinum F str. Langeland]
 gi|295319053|gb|ADF99430.1| alanine racemase [Clostridium botulinum F str. 230613]
          Length = 389

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 163/384 (42%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKKKVNCKEIFAVVKANGYGHGALDIASTLLENGATRLS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  + E  +LR       I +L    P   + I D N+ PV+ S       SK  S    
Sbjct: 63  VACLSEATELREGGITCPINILGITPPTLFEDIIDYNIEPVVFSYDYANQLSKAASLKNR 122

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG     E+L+      +    ++  + SH + +D+     +  Q 
Sbjct: 123 IVKTHIAVDTGMGRLGFDPTVESLEEIKRIQDLSNIKIEGLCSHFSSSDENDKSYSEYQF 182

Query: 180 ERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           + F+       GI        +++S+ I+  P+ +    R GI LYG    +    ++  
Sbjct: 183 KIFQNFRKKLIGINMKIPIYHMSNSAAIIDLPSTYLDAVRAGIILYGYYPSMEVNKENLH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G+ V Y  + K  R S IA+  +GY DGY   LS       
Sbjct: 243 IKQVMTLKANIVHIKTIDSGKYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD + I G D         +D
Sbjct: 298 ------GKVIINGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGKDNINNLRYDAED 351

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G T+ +++  I  R  + Y
Sbjct: 352 IASKVGMTSGEIMSIISKRVPRVY 375


>gi|193063073|ref|ZP_03044165.1| alanine racemase [Escherichia coli E22]
 gi|194426899|ref|ZP_03059452.1| alanine racemase [Escherichia coli B171]
 gi|260846847|ref|YP_003224625.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O103:H2 str. 12009]
 gi|192931332|gb|EDV83934.1| alanine racemase [Escherichia coli E22]
 gi|194415235|gb|EDX31504.1| alanine racemase [Escherichia coli B171]
 gi|195183272|dbj|BAG66813.1| alanine racemase 1 [Escherichia coli O111:H-]
 gi|257761994|dbj|BAI33491.1| alanine racemase 1, PLP-binding, biosynthetic [Escherichia coli
           O103:H2 str. 12009]
 gi|323162193|gb|EFZ48056.1| alanine racemase [Escherichia coli E128010]
          Length = 359

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGIIKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|220918668|ref|YP_002493972.1| alanine racemase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956522|gb|ACL66906.1| alanine racemase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 395

 Score =  289 bits (740), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 91/373 (24%), Positives = 154/373 (41%), Gaps = 19/373 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL +N   + A +  AR  AVVK NAYG G      A   AG     V  
Sbjct: 14  RPVWAEIDLDALAHNVRLLAARASPARLYAVVKANAYGHGAVACGRAALEAGAHGLAVVC 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           V+E  +LR    +A + V+          +    L P + ++  +    ++    G   P
Sbjct: 74  VDEAEELRRAGVEAPLLVIGNTPASDAARVVALRLRPAVGAMDLVEALSAEARRRGAEVP 133

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NR GL     +     +      ++  + +H A A++        Q E  R
Sbjct: 134 IHLELESGLNRHGLPPDALVALAERARALPGLRVEGLFTHFAAAEEGDQRFTRAQFEVLR 193

Query: 184 TLISHYKGI-EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEA 240
                   + E   ++S+ ILL      +  R G+SLYG            ++ V++  A
Sbjct: 194 ETSRRLPWVPERHCSASASILLDHEMALEAVRGGLSLYGYRPAPWCGTDADLRPVMSLRA 253

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+  +     G  V YG      R + +A+   GYADGY  +                + 
Sbjct: 254 RVARVSDVDRGATVGYGRTWAANRPTRVALVMCGYADGYRRSFGNR-----------TQV 302

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            + G   P++G++ MDM M D+T    +  GD + + G D    +  DD+A  + T +++
Sbjct: 303 LVHGRRAPVVGRVAMDMCMVDVTAVPGVAPGDVVTLIGRDGDERVDADDLATIADTISWE 362

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 363 ILAGISARVPRLY 375


>gi|300115384|ref|YP_003761959.1| alanine racemase [Nitrosococcus watsonii C-113]
 gi|299541321|gb|ADJ29638.1| alanine racemase [Nitrosococcus watsonii C-113]
          Length = 356

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 19/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F +  ID +AL++N   +  L+  +R  AVVK + YG G   +A AL       F V  
Sbjct: 2   NFPQAIIDASALRHNLQRVRELAPRSRIMAVVKADGYGHGLTSVAGALVA--ADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  + +L GI   ++  +   + + ++          + +      P 
Sbjct: 60  LEEAMALRQAGHRCPVVLLGGIADKEQLQLAAAHRLTLVVHEFAQLELLERVPIISPLPV 119

Query: 125 ALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L+ DTG +RLG S +  A           +  +  +++HLA AD+    +  +QL+ F 
Sbjct: 120 WLKADTGMHRLGFSPEVAAEAVARLRGCPAVASVVGVMTHLASADESEDSLTPIQLQVFE 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEA 240
            + +   G+  S+A+S+ +++ P+ HF   RPG+ LYG +        +  +++V+T + 
Sbjct: 180 EIAA--PGLLRSMANSAAVIIYPHVHFDWVRPGLMLYGASPFAHGTGAAVGLKSVMTLKT 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I       G+ + YG         ++ VAA+GY DGYP                G   
Sbjct: 238 RLIATHHLRPGDSIGYGATWVCPEAMMVGVAALGYGDGYPRHA-----------RSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G  V ++G+++MDM   D+      +VGD +  +GPD+ +++VA  + T  Y+LL +
Sbjct: 287 LVNGRPVSLVGRVSMDMITLDLRTQPEAKVGDPVIAWGPDLPVEEVARHATTIPYELLCQ 346

Query: 361 IGTRYAK 367
           +  R  +
Sbjct: 347 VTARVPR 353


>gi|209885499|ref|YP_002289356.1| alanine racemase [Oligotropha carboxidovorans OM5]
 gi|209873695|gb|ACI93491.1| alanine racemase [Oligotropha carboxidovorans OM5]
          Length = 412

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 125/364 (34%), Positives = 195/364 (53%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW ++ + +  A  +AV+K +AYG G   +   L +AG + FFV ++ E 
Sbjct: 26  LTIDLDAIVANWKALESRTVPAECSAVIKADAYGCGLTPVTRKLASAGCKTFFVATLAEA 85

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQ 127
            + R   P+A I+VL G+           +  PVI  + +L  + +   + G     ALQ
Sbjct: 86  KQAREAAPKAVIYVLNGLFANCGDDFAKIDARPVIGDLNELAEWDAFRRTRGWRGQAALQ 145

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           ++TG NRLGL+  EA         +    ++L++SHLACA+D ++ +N  QL  FR + S
Sbjct: 146 INTGMNRLGLNPDEARGLA-PRIREPDHGIALVLSHLACAEDVANPMNGRQLAAFRDVAS 204

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL +SSGI LGP++H  L RPG +LYG        +PMQ V+  + RI  IR 
Sbjct: 205 EFSGVPASLVNSSGIFLGPHFHMDLARPGAALYGLNPTPGSDNPMQPVIGLKVRIAQIRS 264

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
               E V YG      R + +A+ + GYADGY    SG++   S       +  + G   
Sbjct: 265 VPKDETVGYGALWHAKRPTRLAIVSAGYADGYFRAASGIEGTRS------AQVVVAGQRC 318

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI+G+++MD+   DITD    ++  G ++ + G  I  D+++   GT  Y++L  +G RY
Sbjct: 319 PIVGRVSMDLMAIDITDVPHGAVRRGHFVTLIGDGITADELSHHFGTIGYEVLTSLGHRY 378

Query: 366 AKFY 369
           A+ Y
Sbjct: 379 ARDY 382


>gi|294667296|ref|ZP_06732516.1| alanine racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292602968|gb|EFF46399.1| alanine racemase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 366

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-AYGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIGAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAEFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQHTAHTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQADIGTPVQLWGDAPQVGALAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRVY 354


>gi|325923659|ref|ZP_08185284.1| alanine racemase [Xanthomonas gardneri ATCC 19865]
 gi|325545858|gb|EGD17087.1| alanine racemase [Xanthomonas gardneri ATCC 19865]
          Length = 366

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 166/368 (45%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLDALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++  Q                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATTQQVRALADFQSPRPLRA 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKLDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELECSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG      ++      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQETESTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+  AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRELPAGEPVGYGARFVAQRPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+T+    E+G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGVVCPLIGRVSMDMLTVDLTEHPQAEIGAPVQLWGDAPRVAPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRTY 354


>gi|153209215|ref|ZP_01947281.1| alanine racemase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218349|ref|YP_002305136.1| alanine racemase, biosynthetic [Coxiella burnetii CbuK_Q154]
 gi|226711036|sp|B6J6U2|ALR_COXB1 RecName: Full=Alanine racemase
 gi|120575470|gb|EAX32094.1| alanine racemase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012611|gb|ACJ19991.1| alanine racemase, biosynthetic [Coxiella burnetii CbuK_Q154]
          Length = 364

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 173/370 (46%), Gaps = 23/370 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I++TALK+N   + AL+  +   A++K N YG G  ++A AL +A    F V  
Sbjct: 2   NRATATINVTALKHNLSQIKALAPKSLAWAMIKSNGYGHGLVRVAKALSDANA--FGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    ++ I V+ G +   E   F  + +  +          +  +   S   
Sbjct: 60  IDEALTLREVGIKSPIIVMKGFYNEAELSQFARHRLGAVIHCSDQVSLLEKTNLTSSLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG NRLG S++++    +    +  + +   +++HLA AD+ +     +Q++RF 
Sbjct: 120 WLKIDTGMNRLGFSVEQSPAVYNQLKTSSSIQKPIGLMTHLADADNENKTFTELQIKRFF 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--------INKSHPMQTV 235
           ++     G   S+ +S+G    PN    L RPGI LYG +                 + V
Sbjct: 180 SVTEKMIG-PKSIVNSAGFFAYPNALVDLIRPGIILYGISPFGINYNSFKEKIEKKFRPV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A+II I+     + V YG       D  IA+ +IGY DGYP               
Sbjct: 239 MTLSAKIIAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHA-----------P 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G + P++G+++MDM   D+    + +VGD + ++G  + ++ +A  +GT  Y
Sbjct: 288 SGTPVLLNGKICPLIGRVSMDMIAIDLRSQPNAQVGDDVILWGEGLPVEIIAEKAGTIAY 347

Query: 356 DLLVRIGTRY 365
           +LL +I  R 
Sbjct: 348 ELLCKITQRV 357


>gi|261341531|ref|ZP_05969389.1| alanine racemase [Enterobacter cancerogenus ATCC 35316]
 gi|288316330|gb|EFC55268.1| alanine racemase [Enterobacter cancerogenus ATCC 35316]
          Length = 359

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFEAADLPTIAEQHLHTSVHNEEQLVALETAELSEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F       K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEDAETFYQRLCQCKNVRQPVNIVSHFARADEPECGATEQQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G   S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPGAR-SIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLVSN 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWTSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  V ++G++ MDM   D+      + GD + ++G  + ++ +A  +G + Y+L+ R+
Sbjct: 290 VNGREVKLVGRVAMDMICVDLGPDAQDKAGDDVVMWGEGLPVERIAEMTGVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|188993228|ref|YP_001905238.1| alanine racemase [Xanthomonas campestris pv. campestris str. B100]
 gi|167734988|emb|CAP53200.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 360

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G  +  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLDALRHNYRLARQL-GGGKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  + + P                 
Sbjct: 60  IEEALELRQAGVRAPILLLEGFFEHDELALIAEHDLWTVVATPWQVRALAEFRSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++      +          ++++HLA AD+        Q   F  
Sbjct: 120 WLKLDSGMHRLGLSPEDFRAAWLHLRGLPQIDSLVLMTHLAQADELECSRTDEQAVAFAL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +  E SL +S G+L  P      +RPG+ LYG       S     ++ V+T  +R
Sbjct: 180 TCGGMRA-ETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQPSELTAQLRPVMTVRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+T+    +VG  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTEHPHADVGTPVQLWGDAPQVSTLAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRHYS 355


>gi|21233076|ref|NP_638993.1| alanine racemase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66770016|ref|YP_244778.1| alanine racemase [Xanthomonas campestris pv. campestris str. 8004]
 gi|23813644|sp|Q8P4R0|ALR_XANCP RecName: Full=Alanine racemase
 gi|81304032|sp|Q4UQB5|ALR_XANC8 RecName: Full=Alanine racemase
 gi|21114928|gb|AAM42917.1| alanine racemase [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66575348|gb|AAY50758.1| alanine racemase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 360

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G  +  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQALIDLDALRHNYRLARQL-GGGKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  + + P                 
Sbjct: 60  IEEALELRQAGVRAPILLLEGFFEHDELALIAEHDLWTVVATPWQVRALAEFRSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++      +          ++++HLA AD+        Q   F  
Sbjct: 120 WLKLDSGMHRLGLSPEDFRAAWLHLRGLPQIDSLVLMTHLAQADELECSRTDEQAVAFAL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                +  E SL +S G+L  P      +RPG+ LYG       S     ++ V+T  +R
Sbjct: 180 TCGGMRA-ETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQPSELTAQLRPVMTVRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R   AGE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPAGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+T+    +VG  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGKVCPLIGRVSMDMLTVDLTEHPHADVGTPVQLWGDAPQVSTLAAQCNVSAYQLLCGL 347

Query: 362 GTRYAKFYT 370
             R  + Y+
Sbjct: 348 -KRVPRHYS 355


>gi|260582214|ref|ZP_05850008.1| alanine racemase [Haemophilus influenzae NT127]
 gi|260094846|gb|EEW78740.1| alanine racemase [Haemophilus influenzae NT127]
          Length = 360

 Score =  289 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           ++    +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SVTKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V AIGY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAIGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|260914151|ref|ZP_05920624.1| alanine racemase [Pasteurella dagmatis ATCC 43325]
 gi|260631784|gb|EEX49962.1| alanine racemase [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 173/366 (47%), Gaps = 16/366 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           + +    KI   ALK+N  ++   + NA+  AVVK NAYG G   ++ A+    V  F V
Sbjct: 2   NMKPATAKISSVALKHNIQTIKQKAPNAKIIAVVKANAYGHGVVFVSEAVEKM-VDCFGV 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             +EE + LR       I +L G    Q+  I   N I  +    +     +        
Sbjct: 61  ARLEEALSLRSNGITKPILLLEGFFCTQDLPILAVNNIQTVVHNIEQLEALQSSDLPNPI 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLER 181
              L++DTG +RLG+ L +  +F     N          +SH + AD+  S   ++QL R
Sbjct: 121 KVWLKIDTGMHRLGVDLSQVDEFYQALKNTPNVDPNIGFVSHFSRADEIHSDYTALQLNR 180

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAE 239
           F    +  KG E S+A+S GIL   + H    RPGI +YG        + + +  V+T  
Sbjct: 181 FLQATADKKG-ERSIAASGGILFWEDSHLDWIRPGIIMYGIAPINVPAREYDLTPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    GE V YGG     +D+ I V AIGY DGYP  +             G  
Sbjct: 240 SSLISVKAHKKGEPVGYGGVWVSDKDTKIGVVAIGYGDGYPRDI-----------PTGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+GK++MDM   D+      +VGD + ++G ++ ++++A  SG  +Y+L+ 
Sbjct: 289 VYLNGRRVPIVGKVSMDMLTVDLGQDSQDKVGDEVILWGKELPIEEIAELSGVISYELIT 348

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 349 KLTPRV 354


>gi|196046083|ref|ZP_03113311.1| alanine racemase [Bacillus cereus 03BB108]
 gi|225864057|ref|YP_002749435.1| alanine racemase [Bacillus cereus 03BB102]
 gi|196023138|gb|EDX61817.1| alanine racemase [Bacillus cereus 03BB108]
 gi|225790862|gb|ACO31079.1| alanine racemase [Bacillus cereus 03BB102]
          Length = 391

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|16273470|ref|NP_439721.1| alanine racemase [Haemophilus influenzae Rd KW20]
 gi|260580354|ref|ZP_05848183.1| alanine racemase [Haemophilus influenzae RdAW]
 gi|1168421|sp|P45257|ALR_HAEIN RecName: Full=Alanine racemase
 gi|1574412|gb|AAC23218.1| alanine racemase, biosynthetic (alr) [Haemophilus influenzae Rd
           KW20]
 gi|260093031|gb|EEW76965.1| alanine racemase [Haemophilus influenzae RdAW]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           ++    +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SVTKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|16762928|ref|NP_458545.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|16767497|ref|NP_463112.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29144415|ref|NP_807757.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|56416047|ref|YP_153122.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161617376|ref|YP_001591341.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167552528|ref|ZP_02346281.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167991437|ref|ZP_02572536.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168236939|ref|ZP_02661997.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168243645|ref|ZP_02668577.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168821308|ref|ZP_02833308.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194448214|ref|YP_002048237.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194735891|ref|YP_002117180.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197262039|ref|ZP_03162113.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197364974|ref|YP_002144611.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198244007|ref|YP_002218141.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204927044|ref|ZP_03218246.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205355019|ref|YP_002228820.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207859401|ref|YP_002246052.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|213051931|ref|ZP_03344809.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213424514|ref|ZP_03357311.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|213647520|ref|ZP_03377573.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
 gi|238913004|ref|ZP_04656841.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|289824655|ref|ZP_06544182.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
 gi|60391222|sp|P0A1A3|ALR1_SALTY RecName: Full=Alanine racemase, biosynthetic
 gi|60391223|sp|P0A1A4|ALR1_SALTI RecName: Full=Alanine racemase, biosynthetic
 gi|25291655|pir||AF1016 alanine racemase (EC 5.1.1.1) [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|153865|gb|AAA27022.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16422805|gb|AAL23071.1| biosynthetic alanine racemase 1 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|16505235|emb|CAD09231.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29140053|gb|AAO71617.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|56130304|gb|AAV79810.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161366740|gb|ABX70508.1| hypothetical protein SPAB_05231 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194406518|gb|ACF66737.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194711393|gb|ACF90614.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197096451|emb|CAR62057.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|197240294|gb|EDY22914.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197290054|gb|EDY29413.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197938523|gb|ACH75856.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|204323709|gb|EDZ08904.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205274800|emb|CAR39859.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205322805|gb|EDZ10644.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205330206|gb|EDZ16970.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205337286|gb|EDZ24050.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205342080|gb|EDZ28844.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|206711204|emb|CAR35580.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261249345|emb|CBG27208.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267996559|gb|ACY91444.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160739|emb|CBW20270.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312915352|dbj|BAJ39326.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|320088655|emb|CBY98413.1| alanine racemase 1 [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321223115|gb|EFX48185.1| Alanine racemase, biosynthetic [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322615403|gb|EFY12323.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322618463|gb|EFY15352.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622125|gb|EFY18975.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627196|gb|EFY23988.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631156|gb|EFY27920.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637626|gb|EFY34327.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322642511|gb|EFY39111.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322643608|gb|EFY40163.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322648343|gb|EFY44802.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654652|gb|EFY50972.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659612|gb|EFY55855.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662179|gb|EFY58395.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322666075|gb|EFY62253.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322672495|gb|EFY68606.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675924|gb|EFY71995.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322680409|gb|EFY76447.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684697|gb|EFY80701.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323132586|gb|ADX20016.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323195961|gb|EFZ81127.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197109|gb|EFZ82250.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323201773|gb|EFZ86837.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323206287|gb|EFZ91249.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213298|gb|EFZ98100.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323215668|gb|EGA00412.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323222091|gb|EGA06477.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323226502|gb|EGA10708.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229127|gb|EGA13256.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323236263|gb|EGA20339.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323237617|gb|EGA21678.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241717|gb|EGA25746.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248136|gb|EGA32073.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254534|gb|EGA38345.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323258406|gb|EGA42083.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323259686|gb|EGA43320.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323265959|gb|EGA49455.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323270401|gb|EGA53849.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326625939|gb|EGE32284.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|326630171|gb|EGE36514.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332991063|gb|AEF10046.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 359

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|145637837|ref|ZP_01793485.1| alanine racemase [Haemophilus influenzae PittHH]
 gi|145268980|gb|EDK08935.1| alanine racemase [Haemophilus influenzae PittHH]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|262045542|ref|ZP_06018563.1| alanine racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037101|gb|EEW38351.1| alanine racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 359

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 171/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +             Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGNDFGCQPVMTLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRA-----------TPSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  +PI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREMPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|168231244|ref|ZP_02656302.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168466930|ref|ZP_02700778.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194472435|ref|ZP_03078419.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197249755|ref|YP_002149160.1| alanine racemase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|194458799|gb|EDX47638.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195630651|gb|EDX49263.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197213458|gb|ACH50855.1| alanine racemase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|205334185|gb|EDZ20949.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 359

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|301156142|emb|CBW15613.1| alanine racemase 1, PLP-binding, biosynthetic [Haemophilus
           parainfluenzae T3T1]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 174/364 (47%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK+N   +   + +++  AVVK NAYG G   ++ AL +  V  F V  
Sbjct: 4   KPATAKISSLALKHNLQVIKEKAPHSKIIAVVKANAYGHGVVFVSSALESM-VDCFAVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    ++  I   N I  +    +     K          
Sbjct: 63  LEEALSLRSNGIIKPILLLEGFFDEKDLPIIAVNNIETVVHNREQLEALKRAVVPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG+SL E   F        ++      +SH + AD+  S    VQL+RF 
Sbjct: 123 WLKIDTGMHRLGVSLDEVDYFYQELKKLPQIQPHLGFVSHFSRADELDSDYTQVQLDRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
               + +G E ++A+S GIL  P  H    RPGI +YG +    +     +  V+   + 
Sbjct: 183 QATKNKEG-ERTIAASGGILFWPEAHLDCIRPGIIMYGISPTDTVGAEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ +R+   GE V YGG     +D+ I V AIGY DGYP             V  G   +
Sbjct: 242 LLAVREHKKGEPVGYGGIWTSPKDTKIGVVAIGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+ +    +VGD + ++G ++ ++ VA  SG  +Y+L+ ++
Sbjct: 291 LNGRIVPIVGRVSMDMLTVDLGEDSQDKVGDEVILWGKELPIETVAKYSGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|256019701|ref|ZP_05433566.1| alanine racemase [Shigella sp. D9]
 gi|332280832|ref|ZP_08393245.1| alanine racemase 1 [Shigella sp. D9]
 gi|332103184|gb|EGJ06530.1| alanine racemase 1 [Shigella sp. D9]
          Length = 359

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG      D+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSECDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|15602278|ref|NP_245350.1| alanine racemase [Pasteurella multocida subsp. multocida str. Pm70]
 gi|20137233|sp|Q9CNL5|ALR_PASMU RecName: Full=Alanine racemase
 gi|12720664|gb|AAK02497.1| Alr [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 360

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 16/366 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           + +    KI   ALK+N  ++   +  ++  AVVK NAYG G   ++ A     V  F V
Sbjct: 2   NMKPATAKISSVALKHNIQTIKQKAPQSKIIAVVKANAYGHGVVFVS-AAVEELVDCFGV 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             +EE + LR       I +L G    ++  +   N I  +    +     K        
Sbjct: 61  ARLEEALSLRSNGITKPILLLEGFFCDKDLPVIAINNIQTVVHNVEQLEALKAAKVPNPI 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++DTG +RLG++L++   F      ++ +      +SH + AD+       +QL R
Sbjct: 121 KVWLKIDTGMHRLGVALEDVEYFYQALRDSENVDPQIGFVSHFSRADELECDYTKLQLTR 180

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAE 239
           F     +  G E S+A+S GIL   + H    RPGI +YG +      + + +  V+T  
Sbjct: 181 FLNATQNKAG-EKSIAASGGILFWESSHLDWIRPGIIMYGISPINVPAQEYDLTPVMTLT 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I++   GE V YGG     +D+ I V AIGY DGYP  +             G  
Sbjct: 240 SSLIAIKQHKKGEPVGYGGIWVSDKDTKIGVVAIGYGDGYPRDI-----------PTGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G  VPI+G+++MDM   D+      +VGD + ++G ++ ++++A  SG  +Y+L+ 
Sbjct: 289 VYLNGRRVPIVGRVSMDMLTVDLGAEAQDKVGDEVILWGKELPIEEIADISGVISYELIT 348

Query: 360 RIGTRY 365
           ++  R 
Sbjct: 349 KLTPRV 354


>gi|319897248|ref|YP_004135443.1| alanine racemase 1, plp-binding, biosynthetic [Haemophilus
           influenzae F3031]
 gi|317432752|emb|CBY81117.1| alanine racemase 1, PLP-binding, biosynthetic [Haemophilus
           influenzae F3031]
          Length = 360

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 174/364 (47%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L  + V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQS-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  I    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETIVHNREQLEALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTKLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG    +RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSSRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D++     +VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLSTDSQDQVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|62182696|ref|YP_219113.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224586012|ref|YP_002639811.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|62130329|gb|AAX68032.1| alanine racemase 1, biosynthetic [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224470540|gb|ACN48370.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322717195|gb|EFZ08766.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 359

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFSAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|84622288|ref|YP_449660.1| alanine racemase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|123523220|sp|Q2P7U1|ALR_XANOM RecName: Full=Alanine racemase
 gi|84366228|dbj|BAE67386.1| alanine racemase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 366

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G    A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVPCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           IIL+R    GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IILVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQADIGATVQLWGQAPRVGPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRTY 354


>gi|330501639|ref|YP_004378508.1| alanine racemase [Pseudomonas mendocina NK-01]
 gi|328915926|gb|AEB56757.1| alanine racemase [Pseudomonas mendocina NK-01]
          Length = 358

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 165/368 (44%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL+A+ +N+      +   +  AVVK NAYG G  ++  AL++     F V  
Sbjct: 2   RPLAAIVDLSAIAHNYAVAKRCAPGRQAFAVVKANAYGHGVREVVTALHDL-ADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  ++R    +AR+ +L G     E  I     + ++                     
Sbjct: 61  LEEAAEVRAMHGEARVLLLEGCFEASEYAIAAQLGLDLVIQGAAQAEALLASDLVRPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG        +     N +      ++SH ACAD+    +   Q+ERF  
Sbjct: 121 WLKLDSGMHRLGFDAANLRHWYARLENAEQVNELNLLSHFACADERGHPLTEQQVERFLD 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+        SLA+S+ +L  P  H    RPGI LYG T     S     ++  +T  AR
Sbjct: 181 LLDLDFS-HRSLANSAAVLTIPAAHMDWLRPGIMLYGATPFAELSARELGLKPAMTLAAR 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YG      R S IA  + GYADGYP                G    
Sbjct: 240 VIAVREVAIGESVGYGASWVAQRPSRIATVSCGYADGYPRHA-----------PSGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           ++G    + G+++MDM   DITD    +V   ++++G ++ LD+VA A  T  Y+LL ++
Sbjct: 289 VEGQRAALAGRVSMDMLTVDITDLPEADVDSPVELWGANLPLDEVAAACSTIGYELLSKV 348

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 349 TARVPRRY 356


>gi|200386495|ref|ZP_03213107.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199603593|gb|EDZ02138.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 359

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTRCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CRGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|288937652|ref|YP_003441711.1| alanine racemase [Klebsiella variicola At-22]
 gi|288892361|gb|ADC60679.1| alanine racemase [Klebsiella variicola At-22]
          Length = 359

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRDLAPASKLVAVVKANAYGHGLLETARTLTD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G    ++  +     +      P+     +           +
Sbjct: 62  EALRLRAGGIAQPILLLEGFFAAEDLAVIAAQRLHTAVHSPEQLAALEQADLPEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    S  K + Q   ++SH A AD+P+      QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLSQCKNVRQPVNVVSHFARADEPTCGATERQLDIFTTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  H+   RPGI LYG +        K    Q V+T  + 
Sbjct: 182 TEGKPGLR-SIAASGGILLWPQSHYDWVRPGIILYGVSPLDDRSTGKDFGCQPVMTLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDAVVLWGEGLAVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|149907726|ref|ZP_01896473.1| alanine racemase [Moritella sp. PE36]
 gi|149809396|gb|EDM69325.1| alanine racemase [Moritella sp. PE36]
          Length = 357

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 168/369 (45%), Gaps = 18/369 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I L +L++N   +  ++ +++  AVVK NAYG G   +A AL +  V  F V  
Sbjct: 2   RSATAEICLQSLQHNVQQIKNIAPHSKIMAVVKANAYGHGLLAVASALTD--VDAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           VEE + LR       I +L G     E  I   N I     + Q     +          
Sbjct: 60  VEEALTLRSGGIVKPILLLEGFFSTDELPILVANNIQTSVHIEQQLDELEQADLEAPIHV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG+             N     Q + +++H +CAD+    +   Q+  F 
Sbjct: 120 WLKMDTGMHRLGIRPDNCKRAIERLKNNPNVVQPARLMTHFSCADEADPSITQRQINIFD 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEA 240
            L++  +G E S+A+S+G+L  P+ H    RPGI LYG +  I      H ++ V+T   
Sbjct: 180 ELVAGEEG-EHSIANSAGVLAWPSAHRDWIRPGIMLYGVSPMIGATAVEHDLKPVMTLTT 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +     GE   YGG    + D+ + V A+GY DGYP                G   
Sbjct: 239 DLIAVHDIKKGETTGYGGIWSASTDTRLGVVAVGYGDGYPRMA-----------PEGTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G +VPI+G+++MDM   D+      +VGD + ++G  +  + VA   GT  Y+L+ +
Sbjct: 288 LINGRIVPIVGRVSMDMLTVDLGVDCQDKVGDKVIMWGAGLPAELVAEHIGTIAYELVTK 347

Query: 361 IGTRYAKFY 369
           +  R    Y
Sbjct: 348 LTQRVTLKY 356


>gi|306846133|ref|ZP_07478695.1| alanine racemase [Brucella sp. BO1]
 gi|306273384|gb|EFM55245.1| alanine racemase [Brucella sp. BO1]
          Length = 399

 Score =  288 bits (738), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVALLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-------------INKSHPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKEPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVAKGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|117923575|ref|YP_864192.1| alanine racemase [Magnetococcus sp. MC-1]
 gi|117607331|gb|ABK42786.1| alanine racemase [Magnetococcus sp. MC-1]
          Length = 396

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 164/381 (43%), Gaps = 26/381 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++    L+IDL AL++N       +        V+K + YG+G   +A  L       F 
Sbjct: 17  THRPTWLEIDLAALRHNLRQARTATGPQVAHFPVIKADGYGIGAIAVAHTLEEE-ADGFC 75

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V  VEE  +LR      RI +  G++PG E+      + P +S    L    +   C   
Sbjct: 76  VALVEEAEQLRTAGINKRIMLFSGLYPGLEERAIRARVEPFLSDEINLNALWQAAKCYGP 135

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++D+G  RLG   +          +    +L+ ++SH+ACADD  S + + QL  
Sbjct: 136 ISVHIKIDSGMARLGYHPEHVPSLLDQLAHMPELKLAGLVSHMACADDRHSPITNAQLAT 195

Query: 182 FRTLISH----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
              ++ H        + SLA+S+ IL  PN H+Q  RPGI +YG +         +  +Q
Sbjct: 196 LSPILEHPLVKQTQAQLSLANSATILGHPNAHYQWVRPGIMIYGASPFFPHTNAANEGLQ 255

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            VV     I  I     G+ + YG     TR + IA   +GYADGY    S         
Sbjct: 256 PVVRWVTHIQRIHTLEKGKSLGYGHTFTATRPTRIAQLPVGYADGYNRLWSN-------- 307

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVAL 348
               G   I G   P++G + MD    DI+D    ++  D   + G     +I L++ A 
Sbjct: 308 ---KGSVLIAGQHCPVVGIVCMDQIAVDISDLQGEVKQWDEAVLLGKQHNAEITLENWAT 364

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y++L RIG R  + Y
Sbjct: 365 ELKTIPYEILTRIGPRVPRRY 385


>gi|222107011|ref|YP_002547802.1| alanine racemase [Agrobacterium vitis S4]
 gi|221738190|gb|ACM39086.1| alanine racemase [Agrobacterium vitis S4]
          Length = 374

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 136/374 (36%), Positives = 202/374 (54%), Gaps = 16/374 (4%)

Query: 1   MHSNEF-LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+++ F  RL IDL AL +N+  + A +  A T+AVVK +AYGLG  ++ PALY AG + 
Sbjct: 9   MNADAFSARLVIDLDALADNYRQLAAETTPAETSAVVKADAYGLGAARVGPALYRAGCRK 68

Query: 60  FFVTSVEEGVKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
           FFV +V+E   LR + P  A +F+L G+ PG E        IPV++S+ QL  +SK+   
Sbjct: 69  FFVANVQEAAGLRQHLPGDAELFILNGLQPGAEPFAAANGFIPVLNSLEQLANWSKMASE 128

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G + P  LQ DTG +RLG S +EA     +        +  I+SHLA ADD +S  N+ 
Sbjct: 129 FGRTLPAILQFDTGMSRLGFSPEEANVLAGDPALLSGLSIRYIMSHLASADDSASTQNAA 188

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           Q    R  ++ + GI    ++S GI +   +H  L RPG++LYG          M+ VV 
Sbjct: 189 QFSVMRERLAQFPGIALCFSNSGGIFIDKQFHGALVRPGVALYGAVPSDLAGRRMKPVVR 248

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +A++I  R   AG  V YG     T+++ +A  AIGYADG P  LS             
Sbjct: 249 VDAKVIQTRTVPAGACVGYGATYVATKETRLATIAIGYADGLPRCLSDR----------- 297

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNY 355
           G  +     +PI+G+++MD    DI+      + +G  +++ GP   L+DVA A+GT  Y
Sbjct: 298 GAAYYGDIRLPIVGRVSMDSMTLDISALPPGTLTLGSLVEMIGPHQSLEDVAQAAGTIAY 357

Query: 356 DLLVRIGTRYAKFY 369
           ++L  +G RY + Y
Sbjct: 358 EILTSLGHRYHRDY 371


>gi|168263431|ref|ZP_02685404.1| alanine racemase [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|194444595|ref|YP_002043497.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194403258|gb|ACF63480.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|205347865|gb|EDZ34496.1| alanine racemase [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 359

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CRGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|154500510|ref|ZP_02038548.1| hypothetical protein BACCAP_04183 [Bacteroides capillosus ATCC
           29799]
 gi|150270741|gb|EDM98037.1| hypothetical protein BACCAP_04183 [Bacteroides capillosus ATCC
           29799]
          Length = 380

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 104/390 (26%), Positives = 164/390 (42%), Gaps = 33/390 (8%)

Query: 1   MHS-NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M         +I L  L++N+ ++ AL     R   VVK NAYG G   +A  L   G +
Sbjct: 1   MERMQTRTWREISLANLEHNYRALRALLPQGCRFLGVVKANAYGNGAVPVAKRLEELGTE 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMS 117
              V  V+E  +LR    +  I VL          +   +L   +          +  ++
Sbjct: 61  YLAVACVDEAAELREAGVKTPILVLGDTPNECAADLLRLDLTQNVPDLETARALSAAAVA 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF-----NKKLGQLSLIISHLACADDPSS 172
            G +    ++VDTG +RLG    EA                  +   I +H + +D  + 
Sbjct: 121 AGKTMKVHMKVDTGMSRLGFLCDEAHMDASVEALAVASRLPGLEAEGIFTHFSDSDG-NE 179

Query: 173 HVNSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
               +Q  RF  ++               A+S  +L  P  +  + RPGI+LYG     +
Sbjct: 180 EYTMLQFGRFLAVLDRLAERGITFPIRHCANSGAVLHYPCTYLDMVRPGIALYGHYPAPD 239

Query: 228 KS----HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++ V+  ++RI  +R   AG  VSYG    L RDSL+AV  IGYADG P   
Sbjct: 240 CEGLDGPGLRPVMELKSRIATVRALPAGTCVSYGRTCTLQRDSLLAVVPIGYADGLPRLC 299

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S            G +  ++G   PI+G++ MDM M D+TD   ++ GD   ++G D   
Sbjct: 300 SN-----------GLEMLVRGQRAPIVGRVCMDMCMVDVTDIPGVQPGDVATVYGSDGDE 348

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + ++  A  +GT  Y+LL  +  R  + Y
Sbjct: 349 TVTVEAAAERAGTIQYELLCAVSERVPRVY 378


>gi|330828532|ref|YP_004391484.1| alanine racemase [Aeromonas veronii B565]
 gi|328803668|gb|AEB48867.1| Alanine racemase [Aeromonas veronii B565]
          Length = 357

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
              +I+  AL++N   +   +   +  AVVK NAYG G   +A  L +     + V  +E
Sbjct: 4   ATAQINTAALRHNLAVVKRHAPACKIIAVVKANAYGHGLLPVARTLVD--ADAYAVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N +       +     + +         L
Sbjct: 62  EALMLRSCAVVKPIVLLEGFFSADDLPVLAANNLQTAVHTWEQLEALEQVELPAPVVAWL 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   E   F       K + Q   I++H + +D+        Q++ F  L
Sbjct: 122 KLDTGMHRLGVRADEMPAFIERLGKCKNVVQPFNIMTHFSRSDELEQPTTREQIDLFSKL 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARI 242
            +   G E ++A+S+GIL  P+ H    RPG+ LYG +   N     + +Q V+T + ++
Sbjct: 182 TAPLAG-ERAMANSAGILAWPDSHCDWVRPGVILYGVSPFPNTIAADYDLQPVMTLKTQL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YG      RD+ + V AIGY DGYP                G    I
Sbjct: 241 IAVRDHKAGEPVGYGANWVSDRDTRLGVIAIGYGDGYPRMAPN-----------GTSVLI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G +VP++G+++MDM+  D+    + + GD   ++G  + ++ VA   GT  Y+L+ ++ 
Sbjct: 290 NGRIVPLVGRVSMDMSTVDLGPGATDKPGDEAVLWGEGLPVERVADEIGTIPYELITKLT 349

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 350 SRVFMEY 356


>gi|170754426|ref|YP_001781290.1| alanine racemase [Clostridium botulinum B1 str. Okra]
 gi|169119638|gb|ACA43474.1| alanine racemase [Clostridium botulinum B1 str. Okra]
          Length = 389

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 163/384 (42%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKNKVNCKEIFAVVKANGYGHGALDIASTLLENGATRLS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  + E ++LR       I +L    P   + I D N+ PV+ S       SK  S    
Sbjct: 63  VACLSEAIELREGGINCPINILGITPPTLFEDIIDYNIEPVVFSYDCANQLSKAASLKNR 122

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG     E+L+      +    ++  + SH + +D+     +  Q 
Sbjct: 123 IVKTHIAVDTGMGRLGFDPTVESLEEIKRIQDLSNIKIEGLCSHFSSSDEKDKSYSEYQF 182

Query: 180 ERF----RTLISHYKGIEASLA-SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           + F    + LI     I      +S+ I+  P+ +    R GI LYG    +    ++  
Sbjct: 183 KIFQNFRKKLIEMNMKIPIYHMSNSAAIIDLPSTYLDAVRAGIILYGYYPSMEVNKENLH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G+ V Y  + K  R S IA+  +GY DGY   LS       
Sbjct: 243 IKQVMTLKANIVHIKTIDSGKYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD + I G D         +D
Sbjct: 298 ------GKVIINGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGKDNINNLRYDAED 351

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G T+ +++  I  R  + Y
Sbjct: 352 IASKVGMTSGEIMSIISKRVPRVY 375


>gi|254720214|ref|ZP_05182025.1| Alr, alanine racemase [Brucella sp. 83/13]
 gi|265985224|ref|ZP_06097959.1| alanine racemase [Brucella sp. 83/13]
 gi|306838644|ref|ZP_07471480.1| alanine racemase [Brucella sp. NF 2653]
 gi|264663816|gb|EEZ34077.1| alanine racemase [Brucella sp. 83/13]
 gi|306406287|gb|EFM62530.1| alanine racemase [Brucella sp. NF 2653]
          Length = 399

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTILSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-------------INKSHPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKEPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVAKGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|302519607|ref|ZP_07271949.1| alanine racemase [Streptomyces sp. SPB78]
 gi|302428502|gb|EFL00318.1| alanine racemase [Streptomyces sp. SPB78]
          Length = 378

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 155/379 (40%), Gaps = 29/379 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R +IDL AL+ N   +   +  A   AVVK +AYG G    A A   AG     V +  
Sbjct: 8   PRAEIDLAALRANVRLLRERAPGAAFMAVVKADAYGHGALACARAAREAGASWLGVATPA 67

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR    + R+        G  +   + ++   +S         +   + G +    
Sbjct: 68  EALALRAAGAEGRMLCWLWTPGGPWRAAIEADIDVSVSGQWALDEVAAAARAVGATARVH 127

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERF 182
           L+ DTG  R G    +      N+   +   L ++  + SH ACAD+P     + QL  F
Sbjct: 128 LKADTGLGRNGCQPADWPALVGNALALQAEGLVRVVGLWSHFACADEPGHPSIAAQLTLF 187

Query: 183 RTL--ISHYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQ 233
             +  ++   G+      LA+S   L  P  H+ L RPGI++YG +            ++
Sbjct: 188 EEMTGLAARLGVRAEVRHLANSPATLSLPESHYDLVRPGIAMYGLSPSPAMGTHTDFGLR 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+   A + L+++   G  VSYG       D+ + +  +GY DG P   SG        
Sbjct: 248 PVMRLVAPLALVKRVPGGHGVSYGHLYVTPGDTTLGLVPLGYGDGIPRHASGS------- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   + G    + G+I MD  + D+        G    +FGP    +   +D A A
Sbjct: 301 ----GPVLVNGKWHTVAGRIAMDQFVVDLGGDTPAA-GSEAVLFGPGDRGEPSAEDWARA 355

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           + +  Y+++ RIG R  + 
Sbjct: 356 ADSIVYEIVTRIGARVPRV 374


>gi|30262102|ref|NP_844479.1| alanine racemase [Bacillus anthracis str. Ames]
 gi|47527372|ref|YP_018721.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49184943|ref|YP_028195.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|165870205|ref|ZP_02214861.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167633047|ref|ZP_02391373.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|167638340|ref|ZP_02396617.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|170686461|ref|ZP_02877682.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|170706003|ref|ZP_02896465.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|177650850|ref|ZP_02933747.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190568000|ref|ZP_03020911.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227815101|ref|YP_002815110.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229604370|ref|YP_002866463.1| alanine racemase [Bacillus anthracis str. A0248]
 gi|254684669|ref|ZP_05148529.1| alanine racemase [Bacillus anthracis str. CNEVA-9066]
 gi|254737113|ref|ZP_05194817.1| alanine racemase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254743702|ref|ZP_05201387.1| alanine racemase [Bacillus anthracis str. Kruger B]
 gi|30256728|gb|AAP25965.1| alanine racemase [Bacillus anthracis str. Ames]
 gi|47502520|gb|AAT31196.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178870|gb|AAT54246.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|164714093|gb|EDR19614.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167513641|gb|EDR89010.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|167531859|gb|EDR94524.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|170129005|gb|EDS97870.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|170669537|gb|EDT20279.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|172083311|gb|EDT68372.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190561055|gb|EDV15029.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227006748|gb|ACP16491.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229268778|gb|ACQ50415.1| alanine racemase [Bacillus anthracis str. A0248]
          Length = 391

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 11  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 71  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 131 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 190

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 191 VNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 251 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 300 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 359

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 360 NYEVTCMLDRRIPRVY 375


>gi|194432311|ref|ZP_03064599.1| alanine racemase [Shigella dysenteriae 1012]
 gi|194419514|gb|EDX35595.1| alanine racemase [Shigella dysenteriae 1012]
 gi|320179049|gb|EFW54008.1| Alanine racemase, biosynthetic [Shigella boydii ATCC 9905]
 gi|332084266|gb|EGI89469.1| alanine racemase [Shigella dysenteriae 155-74]
          Length = 359

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEKAETFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+        GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDNAGDSVILWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|148826764|ref|YP_001291517.1| alanine racemase [Haemophilus influenzae PittGG]
 gi|148718006|gb|ABQ99133.1| alanine racemase [Haemophilus influenzae PittGG]
          Length = 360

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLEALKRSNLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTNTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|68249839|ref|YP_248951.1| alanine racemase [Haemophilus influenzae 86-028NP]
 gi|148826096|ref|YP_001290849.1| alanine racemase [Haemophilus influenzae PittEE]
 gi|229847109|ref|ZP_04467214.1| alanine racemase [Haemophilus influenzae 7P49H1]
 gi|68058038|gb|AAX88291.1| alanine racemase [Haemophilus influenzae 86-028NP]
 gi|148716256|gb|ABQ98466.1| alanine racemase [Haemophilus influenzae PittEE]
 gi|229809938|gb|EEP45659.1| alanine racemase [Haemophilus influenzae 7P49H1]
          Length = 360

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 170/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLEALKRSNLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|318058076|ref|ZP_07976799.1| alanine racemase [Streptomyces sp. SA3_actG]
          Length = 378

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 156/379 (41%), Gaps = 29/379 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R +IDL AL+ N   +   +  A   AVVK +AYG G    A A   AG     V +  
Sbjct: 8   PRAEIDLAALRANVRLLRERAPGAAFMAVVKADAYGHGALACARAAREAGASWLGVATPA 67

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR    + R+        G  +   + ++   +S         +   + G +    
Sbjct: 68  EALALRAAGAEGRMLCWLWTPGGPWRAAIEADIDVSVSGQWALDEVAAAARAAGATARVH 127

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERF 182
           L+ DTG  R G    +      N+   +   L ++  + SH ACAD+P     + QL  F
Sbjct: 128 LKADTGLGRNGCQPADWPALVGNALALQAEGLVRVVGLWSHFACADEPGHPSIAAQLTLF 187

Query: 183 RTL--ISHYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQ 233
             +  ++   G+      +A+S   L  P  H+ L RPGI++YG +       +    ++
Sbjct: 188 EEMTGLAARLGVRAEVRHIANSPATLSLPESHYDLVRPGIAMYGLSPSPTMGTHTDFGLR 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+   A + L+++   G  VSYG       D+ + +  +GY DG P   SG        
Sbjct: 248 PVMRLVAPLALVKRVPGGHGVSYGHLYVTPGDTTLGLVPLGYGDGIPRHASGS------- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   + G    + G+I MD  + D+        G    +FGP    +   +D A A
Sbjct: 301 ----GPVLVNGKWHTVAGRIAMDQFVVDLGGDTPA-PGSEAVLFGPGDRGEPSAEDWARA 355

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           + +  Y+++ RIG R  + 
Sbjct: 356 ADSIVYEIVTRIGARVPRV 374


>gi|77163759|ref|YP_342284.1| alanine racemase region [Nitrosococcus oceani ATCC 19707]
 gi|254435880|ref|ZP_05049387.1| alanine racemase [Nitrosococcus oceani AFC27]
 gi|123595159|sp|Q3JEJ2|ALR_NITOC RecName: Full=Alanine racemase
 gi|76882073|gb|ABA56754.1| alanine racemase [Nitrosococcus oceani ATCC 19707]
 gi|207088991|gb|EDZ66263.1| alanine racemase [Nitrosococcus oceani AFC27]
          Length = 356

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 170/367 (46%), Gaps = 19/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            F +  ID +AL++N   +  L+  ++  AVVK + YG G  ++A  L       F V  
Sbjct: 2   NFPQAIIDASALRHNLQRVRELAPRSQIMAVVKADGYGHGLTRVADVLVA--ADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   LR    +  + +L GI   ++  +   + + ++          + +      P 
Sbjct: 60  LEEATALRQAGHRCPVVLLGGISDKEQLQLAAAHRLTLVVHEFAQLDLLERVRITSPLPV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSVQLERFR 183
            ++ DTG +RLG   Q              +  +  ++SHLA AD+    +  +QL+ F 
Sbjct: 120 WVKADTGMHRLGFPPQVVAKAIARLRCCPAVASVVGLMSHLASADESEDFLTPIQLQTFE 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEA 240
            + +   G+  S+A+S+ +++ P  HF   RPG+ LYG +        +  +++V+T + 
Sbjct: 180 GIAA--PGLLRSMANSAAVMVYPYAHFDWVRPGLMLYGASPFAHGTGAAVGLKSVMTLQT 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I I     G+ + YG          + VAA+GY DGYP                G   
Sbjct: 238 RLIAIHHLRPGDSIGYGATWVCPEAMTVGVAALGYGDGYPRHA-----------VSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G  VP++G+++MDM   D+      +VGD +  +GP++ +++VA  + T  Y+LL +
Sbjct: 287 LVNGRPVPLVGRVSMDMITLDLRTQPKAKVGDPVIAWGPNLPVEEVARHATTIPYELLCQ 346

Query: 361 IGTRYAK 367
           +  R  +
Sbjct: 347 VTGRVPR 353


>gi|154706770|ref|YP_001424314.1| alanine racemase, biosynthetic [Coxiella burnetii Dugway 5J108-111]
 gi|189027532|sp|A9KFM0|ALR_COXBN RecName: Full=Alanine racemase
 gi|154356056|gb|ABS77518.1| alanine racemase, biosynthetic [Coxiella burnetii Dugway 5J108-111]
          Length = 364

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 171/370 (46%), Gaps = 23/370 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I++TALK+N   + AL+  +    ++K N YG G  ++A AL +A    F V  
Sbjct: 2   NRATATINVTALKHNLSQIKALAPKSLAWVMIKSNGYGHGLVRVAKALSDANA--FGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    ++ I V+ G +   E   F  + +  +          +  +   S   
Sbjct: 60  IDEALTLREVGIKSPIIVMKGFYNEAELSQFARHRLGAVIHCSDQVSLLEKTNLTSSLSV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG NRLG S++++    +    +  + +   +++HLA AD+ +     +Q++RF 
Sbjct: 120 WLKIDTGMNRLGFSVEQSPAVYNQLKTSSSIQKPIGLMTHLADADNENKTFTELQIKRFF 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--------INKSHPMQTV 235
           ++     G   S+ +S+G    PN      RPGI LYG +                 + V
Sbjct: 180 SVTEKMIG-PKSIVNSAGFFAYPNALVDWIRPGIILYGISPFGINYNSFKEKIEKKFRPV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A+II I+     + V YG       D  IA+ +IGY DGYP               
Sbjct: 239 MTLSAKIIAIKNRRQNDSVGYGCTWSCPEDMPIAIVSIGYGDGYPRHA-----------P 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G + P++G+++MDM   D+    + +VGD + ++G  + ++ +A  +GT  Y
Sbjct: 288 SGTPVLLNGKICPLIGRVSMDMIAIDLRSQPNAQVGDDVILWGEGLPVEIIAEKAGTIAY 347

Query: 356 DLLVRIGTRY 365
           +LL +I  R 
Sbjct: 348 ELLCKITQRV 357


>gi|295101040|emb|CBK98585.1| alanine racemase [Faecalibacterium prausnitzii L2-6]
          Length = 398

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 32/385 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +  +IDL AL++N+ ++ A +G     AVVK ++YG G  + A      G     V+ + 
Sbjct: 10  VWAEIDLDALRHNFRAVKARAGEMPLCAVVKADSYGHGAVECAKVFAEEGAAWLAVSCLA 69

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E  +LR       I +L  + P    ++   ++     S+PQ    S+     GV     
Sbjct: 70  EARQLRKSGLTLPILILGHVEPSCAPVLIQEDITAACYSLPQAKALSEAACAAGVKVKVH 129

Query: 126 LQVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQ 178
           L+ DTG  R+G         AL    ++       ++ +  H A ADD S+      S Q
Sbjct: 130 LKADTGMGRIGFALRTDFDAALAEMLDACRLPGLDVTGLFQHFAVADDDSADSVAYTSQQ 189

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYH------FQLTRPGISLYGGTDKIN 227
            E F         + ++       +S+G++L P++         + RPGI LYG      
Sbjct: 190 HELFVRACQGLAEAGFEPAVVHCDNSAGVMLHPDWPAGLPRTHCMARPGIILYGFDPSDE 249

Query: 228 KSHPMQTV-VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
               +    +  +  + ++++   G+  SYG +    + + +A    GYADGYP  LS  
Sbjct: 250 VRFGIFRPVMKLKTIVSMVKEMQPGQSASYGRRFTAEKPTKVATLCAGYADGYPRLLS-- 307

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--KLD 344
                      G   IKG   P+LG++ MD  M D++    ++ GD   ++G ++    +
Sbjct: 308 --------CGKGIVEIKGMPCPVLGRVCMDQIMVDVSALPDVQEGDEAILWGGEVSDSAE 359

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            VA  + T +Y++L  +  R  + Y
Sbjct: 360 TVAHKTDTISYEVLCGVSRRVPRVY 384


>gi|319404005|emb|CBI77593.1| Alanine racemase [Bartonella rochalimae ATCC BAA-1498]
          Length = 373

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 118/365 (32%), Positives = 192/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID+ A+  N+ ++         +AVVK +AYGLG EKIAPALY AG + FF+  ++E 
Sbjct: 19  ATIDIGAIIANYKTLVQRVAPVECSAVVKADAYGLGAEKIAPALYQAGCRTFFIAHLKEA 78

Query: 69  VKLRLYTPQARIFV-LYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           ++L+   P     + L GI P  E+ +  T ++PV++S  ++  +       G   P  +
Sbjct: 79  LQLKAILPNNVTLILLNGIPPTAEEFVTQTGIVPVLNSRNEIENWQMHCQKNGKKFPAII 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E      N    ++  +  IISHLA  D+ +   N  Q    +  +
Sbjct: 139 QIDTNMNRLGLDQEELQWLIQNPTLFEIADIKYIISHLANGDNATHTSNCEQKNAMKKAL 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +ASLA+S GI LGP+++F L RPGI LYG          +++V+  +A++I  R
Sbjct: 199 AQLPACKASLANSGGIFLGPDFYFDLVRPGIGLYGIDPHQKHPTSLKSVLKLKAQVIQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG     + S++   +IGYADG+   LS             G  +   + 
Sbjct: 259 CTEAGTPVGYGGSFITQKPSILTTISIGYADGWLRNLSN-----------KGSVYFNQHK 307

Query: 307 VPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+I+MD  + D T+      + GD++++ G    +++VA  +GT  Y++L  +G+R
Sbjct: 308 LPIIGQISMDSIIVDATNLKHEKPKRGDWVELIGKHQTVENVAADAGTIPYEILTSLGSR 367

Query: 365 YAKFY 369
           Y + Y
Sbjct: 368 YKRIY 372


>gi|193885273|pdb|3B8T|A Chain A, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant P219a
 gi|193885274|pdb|3B8T|B Chain B, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant P219a
 gi|193885275|pdb|3B8T|C Chain C, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant P219a
 gi|193885276|pdb|3B8T|D Chain D, Crystal Structure Of Escherichia Coli Alaine Racemase
           Mutant P219a
          Length = 379

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 24  ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 82  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 141

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 142 XLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 201

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 202 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSALEDRSTGADFGCQPVMSLTSS 260

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 261 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 309

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 310 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 369

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 370 TSRVAMKY 377


>gi|188578747|ref|YP_001915676.1| alanine racemase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523199|gb|ACD61144.1| alanine racemase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 366

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLCGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LSAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           IIL+R    GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IILVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD     +G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQAAIGATVQLWGQAPRVGPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRTY 354


>gi|118477525|ref|YP_894676.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|228927166|ref|ZP_04090229.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|229091092|ref|ZP_04222315.1| Alanine racemase [Bacillus cereus Rock3-42]
 gi|229121649|ref|ZP_04250874.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|229184316|ref|ZP_04311523.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|254720986|ref|ZP_05182777.1| alanine racemase [Bacillus anthracis str. A1055]
 gi|300118202|ref|ZP_07055950.1| alanine racemase [Bacillus cereus SJ1]
 gi|118416750|gb|ABK85169.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|228599112|gb|EEK56725.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|228661869|gb|EEL17484.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|228692223|gb|EEL45959.1| Alanine racemase [Bacillus cereus Rock3-42]
 gi|228832492|gb|EEM78066.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|298724513|gb|EFI65207.1| alanine racemase [Bacillus cereus SJ1]
          Length = 408

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|306841349|ref|ZP_07474058.1| alanine racemase [Brucella sp. BO2]
 gi|306288652|gb|EFM59988.1| alanine racemase [Brucella sp. BO2]
          Length = 399

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           + L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  MALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-------------INKSHPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKEPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVAKGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGMLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|317493449|ref|ZP_07951870.1| alanine racemase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918392|gb|EFV39730.1| alanine racemase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 359

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N+  +   + ++R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNFQQIRQFAPHSRLIAVVKANAYGHGLLETAKTLKD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E +KLR       I +L G     +  +   N I       +     +           +
Sbjct: 62  EALKLRSGGIVKPILMLEGFFSADDLPVLVANNIETAIHSEEQLQALEEAELERPVKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F     N +   Q   I+SH + AD+P + +   QL  F   
Sbjct: 122 KLDTGMHRLGVRPEQADAFYTRLSNCRNVEQPVNIMSHFSRADEPETGMTEAQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARI 242
            +   G++ S+A+S GILL    H  + RPGI LYG +         + +Q V+T ++ +
Sbjct: 182 ATGKPGLQ-SIAASGGILLWTQSHRDMVRPGIILYGVSPLAEPYADHYGLQPVMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V Y G     RD+ + V AIGY DGYP +              G    +
Sbjct: 241 IAVREHKAGEPVGYNGTWVSQRDTRLGVVAIGYGDGYPRSA-----------PSGTPVLV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+      +VGD + ++  ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVPIVGRVSMDMISVDLGPEAKDKVGDEVVLWSAELPVEKIAKYTGISAYELITKLT 349

Query: 363 TRYAKFY 369
            R    Y
Sbjct: 350 PRVTMEY 356


>gi|146309923|ref|YP_001174997.1| alanine racemase [Enterobacter sp. 638]
 gi|145316799|gb|ABP58946.1| alanine racemase [Enterobacter sp. 638]
          Length = 359

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFEATDLTTIADQHLHTAIHNEEQLLALETAELSEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSQCKNVHQPVNIVSHFARADEPECGATEQQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEAR 241
                G+  S+A+S GILL P  HF   RPGI LYG +   NK       +Q V++  + 
Sbjct: 182 CEGKPGMR-SIAASGGILLWPQSHFDWARPGIILYGVSPLENKPWGPDFGLQPVMSLVSN 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG      D+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSESDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  V I+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVKIVGRVAMDMICVDLGPDAQDKAGDAVVLWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|239832571|ref|ZP_04680900.1| alanine racemase [Ochrobactrum intermedium LMG 3301]
 gi|239824838|gb|EEQ96406.1| alanine racemase [Ochrobactrum intermedium LMG 3301]
          Length = 380

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 191/365 (52%), Gaps = 19/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       R AAVVK +AYGLG  ++APA Y+AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIARHIAPTRAAAVVKADAYGLGASRVAPAFYDAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           + L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  + +     G   P  L
Sbjct: 81  IALKPFLQPDATLYVLNGLQPGTEAACARDGILPVLNSLEQIENWGALAARQGRKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +RLGLS  E      N        +  +ISHLA  D+P +  N+ QL     L+
Sbjct: 141 QLDTGMSRLGLSASEFERLLENFALLDNIDIKFVISHLASGDEPENAANARQLANMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                +  + A+S G  L  +YHF L RPG++LYG   +      +  V+T  AR+I +R
Sbjct: 201 VRLPKLPVAFANSGGSFLDKSYHFDLARPGVALYGVGPENE----IVPVLTLSARVIQVR 256

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YGG         +A  A+GYADG+  +LS             G  F     
Sbjct: 257 DIDKGAAVGYGGTYVAEGPMRVATIAVGYADGWFRSLSN-----------KGSAFFGDTR 305

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    D++      +++G  +++ GP  +L+DVA    T  Y++L  +G R
Sbjct: 306 LPIIGRVSMDSITLDVSALPEGTLKLGSLVELIGPHQRLEDVARDCDTIPYEILTALGNR 365

Query: 365 YAKFY 369
           YA+ Y
Sbjct: 366 YARVY 370


>gi|82779537|ref|YP_405886.1| alanine racemase [Shigella dysenteriae Sd197]
 gi|123560897|sp|Q327W0|ALR_SHIDS RecName: Full=Alanine racemase
 gi|81243685|gb|ABB64395.1| alanine racemase 1 [Shigella dysenteriae Sd197]
          Length = 359

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKVGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELIARL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|49475978|ref|YP_034019.1| alanine racemase [Bartonella henselae str. Houston-1]
 gi|49238786|emb|CAF28055.1| Alanine racemase [Bartonella henselae str. Houston-1]
          Length = 372

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 117/364 (32%), Positives = 181/364 (49%), Gaps = 14/364 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID+ A+  N+ ++         +AVVK NAYGLG  KIAPALY AG + FFV  +EE 
Sbjct: 19  ATIDVRAIVANYRTLAQHVAPTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEEA 78

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV--ISSVPQLTFYSKLMSCGVSHPYAL 126
           ++L+   P+  +  L    P + +     + I     S      + +         P  +
Sbjct: 79  LQLKAVLPENVMIALLNGFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAII 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDT  +RLGL  +E      N    +  ++  I+SHLA  +D S   N+ QL  F+ ++
Sbjct: 139 QVDTNMSRLGLDKKELQKLIKNPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVL 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     + S A+S GI LG +++F L RPGI+LYG         P++ VV  EA+++  R
Sbjct: 199 AQLPTCKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPHGKHPTPLKAVVKVEAQVLQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V Y       R S +A  +IGYADG+P  LS             G  +  G+ 
Sbjct: 259 FIDAGIPVGYRESFMTRRPSTLATISIGYADGWPRILSN-----------KGTVYFNGHK 307

Query: 307 VPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +PI+G I+MD  + D TD     + GD++++ GP   L+ V+  + T  +++L  +G RY
Sbjct: 308 LPIVGHISMDSIIVDATDLDKKPQRGDWVELIGPHQPLEKVSTDTNTIPHEILTSLGKRY 367

Query: 366 AKFY 369
            + Y
Sbjct: 368 KRIY 371


>gi|301330573|ref|ZP_07223182.1| alanine racemase [Escherichia coli MS 78-1]
 gi|300843491|gb|EFK71251.1| alanine racemase [Escherichia coli MS 78-1]
          Length = 359

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELIARL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|153008776|ref|YP_001369991.1| alanine racemase [Ochrobactrum anthropi ATCC 49188]
 gi|151560664|gb|ABS14162.1| alanine racemase [Ochrobactrum anthropi ATCC 49188]
          Length = 380

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 197/365 (53%), Gaps = 19/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL+AL++N+ ++       R AAVVK +AYGLG  ++APA Y+AG +DFFV  + E 
Sbjct: 21  LTIDLSALRHNYSAIARHIAPTRAAAVVKADAYGLGASRVAPAFYDAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           + L+ +  P A ++VL G+ PG E+      ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  IALKPFIQPDATLYVLNGLQPGTEEACAREGILPVLNSLEQIENWAALATRQGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +RLGLS +E   F  N+       +  +ISHLA  D+P +  N+ QL     L+
Sbjct: 141 QLDTGMSRLGLSPKEFERFLENATLLDAIDIKFVISHLASGDEPENAANARQLANMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +    +  + A+S G  L   YHF L RPG++LYG   K      +  V+T  AR+I +R
Sbjct: 201 ARLPKLPVAFANSGGSFLDKTYHFDLARPGVALYGVGPKSE----IIPVLTLSARVIQVR 256

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YGG         +A  A+GYADG+  +LS             G  F     
Sbjct: 257 DIDKGAAVGYGGAYIAEGPMRVATIAVGYADGWFRSLSN-----------KGAAFFGDTR 305

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    D++      +++G  +++ GP  +L+DVA    T  Y++L  +G R
Sbjct: 306 LPIIGRVSMDSITLDVSALPEGTLKLGSLVELIGPHQRLEDVARDCDTIPYEILTALGNR 365

Query: 365 YAKFY 369
           YA+ Y
Sbjct: 366 YARVY 370


>gi|228914698|ref|ZP_04078307.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228845017|gb|EEM90059.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 408

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|81301010|ref|YP_401218.1| alanine racemase [Synechococcus elongatus PCC 7942]
 gi|81169891|gb|ABB58231.1| alanine racemase [Synechococcus elongatus PCC 7942]
          Length = 406

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S +   +++D  A+  N   +   L+ +    AVVK +AYG G   IA  +  AG     
Sbjct: 23  SYQRAWVEVDQGAIAANTRQIRQFLAPSCELMAVVKADAYGHGAVAIASTVLGAGATALG 82

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT--FYSKLMSCG 119
           V ++ EGV+LR     A I +L  IH   E        I    S P+        L   G
Sbjct: 83  VATIPEGVRLREAGITAPILLLGSIHSPDEVQAIAHWQIQPSLSTPKQALICAEVLDRLG 142

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            S P  L++DTG +RLG   Q A++F          QL+ + SH A AD P       Q 
Sbjct: 143 QSLPVHLKLDTGMSRLGAPWQTAVEFLQLVHGLPSLQLASLYSHFATADSPDRAPLQQQH 202

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPM 232
             F   I+  +       +  +A+S+  LL  + H+   R G++LYG      +     +
Sbjct: 203 AAFEQAIAQIQAEGLPVPKLHIANSAATLLDSSLHYDQVRVGLALYGLYPAPHLGDRLSL 262

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ +AR+  +    AG+ VSYG +    R++ IAV  IGYADG P  LS        
Sbjct: 263 YPALSVKARVTHVTTLPAGQGVSYGHRYVTQRETPIAVVGIGYADGVPRALSNQM----- 317

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                 +   +G  +P +G ITMD  M DI+    +  GD + + G      I  DD A 
Sbjct: 318 ------EVLYRGQRLPQIGAITMDQMMIDISAMPQLAPGDVVTLLGRSGSEQITADDWAD 371

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            + T ++++L     R  +
Sbjct: 372 RANTISWEILCGFKDRLPR 390


>gi|153871849|ref|ZP_02000914.1| alanine racemase 2, PLP-binding, catabolic [Beggiatoa sp. PS]
 gi|152071686|gb|EDN69087.1| alanine racemase 2, PLP-binding, catabolic [Beggiatoa sp. PS]
          Length = 357

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 107/367 (29%), Positives = 178/367 (48%), Gaps = 19/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 ID  AL+ N   +   + N+R  AV+K N YG G  ++A     A V  F V+ 
Sbjct: 3   RPAHAFIDTAALRGNVQRVKVCAPNSRIMAVIKANGYGHGAIRMAQT-IEASVNAFAVSC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR       I +L G   P +  II D +L  V+ +  Q               
Sbjct: 62  LEEALQLREAEITIPIVLLEGFFHPNELPIIADQDLHIVVHTHKQFEDL-LKAPLEKPIT 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VDTG +RLG +  +          ++++ Q   ++SHL+CADD    +   Q + F
Sbjct: 121 IWLKVDTGMHRLGFAPSDIEPIYKLLKHSQQIAQPIRLMSHLSCADDRQDEITEQQTQIF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAE 239
              ++ +  +EASLA+S+G+L  PN H    RPGI LYG +  +    K   +Q+V+  +
Sbjct: 181 MA-LARHLNLEASLANSAGVLGWPNTHADWVRPGIMLYGVSPFLKSAGKREGLQSVMQLQ 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +++   GE + YG   +  +  L+ V AIGYADGYP                G  
Sbjct: 240 STLISVKRHRKGEAIGYGATWRCPQTMLVGVVAIGYADGYPRHA-----------PSGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G  VP++G+++MDM   D+    +  +GD + ++G  + ++++A  +GT  Y+LL 
Sbjct: 289 VLVNGRRVPLVGRVSMDMITVDLRSQPNARIGDPVVLWGRHLPVEEIANDAGTIAYELLC 348

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 349 HVNHRVK 355


>gi|145635716|ref|ZP_01791411.1| alanine racemase [Haemophilus influenzae PittAA]
 gi|145639886|ref|ZP_01795486.1| alanine racemase [Haemophilus influenzae PittII]
 gi|229845613|ref|ZP_04465739.1| alanine racemase [Haemophilus influenzae 6P18H1]
 gi|145267039|gb|EDK07048.1| alanine racemase [Haemophilus influenzae PittAA]
 gi|145270977|gb|EDK10894.1| alanine racemase [Haemophilus influenzae PittII]
 gi|229811480|gb|EEP47183.1| alanine racemase [Haemophilus influenzae 6P18H1]
 gi|309751068|gb|ADO81052.1| Alanine racemase [Haemophilus influenzae R2866]
          Length = 360

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           ++    +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SVTKDKQG-ERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPIY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       +GD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLIGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|320009058|gb|ADW03908.1| alanine racemase [Streptomyces flavogriseus ATCC 33331]
          Length = 411

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 165/380 (43%), Gaps = 29/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N   + A +  A+  AVVK +AYG G    A A   AG       + 
Sbjct: 35  RARAEIDLAALRANVRVLRARASGAQLMAVVKSDAYGHGAVPCARAAQEAGASWLGTATP 94

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR    + R+        G  +   + ++   +S +       +     G+    
Sbjct: 95  QEALALRAAGIRGRVMCWLWTPGGPWREAVEADIDVSVSGMWALDEVVAAATEAGIPARI 154

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G    +  +    +   +   + +++ + SH ACAD+P     + QL+ 
Sbjct: 155 QLKADTGLGRNGCQPADWPELVSAARAAEEAGVLRVTGLWSHFACADEPGHPSIAAQLDV 214

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           FR +++       +     +A+S   L  P  HF L R GI++YG +            +
Sbjct: 215 FRDMVAYAEKEGVRPEVRHIANSPATLTVPESHFDLVRTGIAMYGISPSPELGTSADFGL 274

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A + L+++   G  +SYG       ++ +A+  +GYADG P   SG       
Sbjct: 275 RPVMTLAASVALVKQVPPGHGISYGHHYTTAAETTLALVPVGYADGIPRHASGR------ 328

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   + G +  I G++ MD  + D+   + +E G    +FGP    +   +D A 
Sbjct: 329 -----GPVLVGGAVRRIAGRVAMDQFVVDLGGEV-LEAGAEAVLFGPGDRGEPSAEDWAR 382

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
           A+ T  Y+++ RIG R  + 
Sbjct: 383 AADTIAYEIVTRIGVRVPRV 402


>gi|58580317|ref|YP_199333.1| alanine racemase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|81311987|sp|Q5H522|ALR_XANOR RecName: Full=Alanine racemase
 gi|58424911|gb|AAW73948.1| alanine racemase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 366

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 164/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +  IDL AL++N+     L G ++  AVVK +AYG G    A AL       F V  
Sbjct: 2   RPAQASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVPCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDEQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LTAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           IIL+R    GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IILVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD    ++G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQADIGATVQLWGQAPRVGPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRLPRTY 354


>gi|149183253|ref|ZP_01861697.1| alanine racemase [Bacillus sp. SG-1]
 gi|148849049|gb|EDL63255.1| alanine racemase [Bacillus sp. SG-1]
          Length = 394

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 94/386 (24%), Positives = 155/386 (40%), Gaps = 31/386 (8%)

Query: 1   MHSN----EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNA 55
           M +         ++IDL  L  N H++           AVVK NAYG G  + A    N 
Sbjct: 1   MITQTRFFRDTWVEIDLDNLYKNVHNIKQHLPEGVTMFAVVKANAYGHGDVQTAHTALNG 60

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SK 114
           G     V  ++E + LR    +A I VL         +    ++   +     L      
Sbjct: 61  GAGGLAVAFLDEAISLRENGIEAPILVLGATRAEDAYLAMSHDISLTVFDYAWLESAREY 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           L          ++ DTG  R+G+    +          +   QL  + +H A AD+  + 
Sbjct: 121 LEKEDGKLNLHIKCDTGMGRIGVRNSADLQKVEKFIRQESKFQLEGVFTHFATADELDTE 180

Query: 174 VNSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK--- 228
               QLE F  ++S        +   +S+  L  P  HF   R GI++YG +  +     
Sbjct: 181 YFERQLEVFERMLSSLTERPKYIHSSNSAATLSHPKSHFNAVRAGIAMYGLSPSVEMKAV 240

Query: 229 -SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
              P++ V +  +RI+ +++  AGE VSYG   +  ++  I    IGYADG+   L G  
Sbjct: 241 LPFPLEQVFSLHSRIVQVKELRAGEKVSYGATYETKKNEWIGTLPIGYADGWLRKLQGQ- 299

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      +  + G   PI+G+I MD  M  + +   ++ G  + + G      I +
Sbjct: 300 -----------EVLVDGKRAPIVGRICMDQCMISLPE--EVQPGTKVTLIGRQDGDFISM 346

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           D++A    T NY++   I  R  + Y
Sbjct: 347 DEIAAKLDTINYEIPCIISNRVPRIY 372


>gi|163940135|ref|YP_001645019.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|163862332|gb|ABY43391.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
          Length = 398

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 163/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSN--EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+ N      +++DL AL+ N+               VVK NAYG G   IA A+  AG 
Sbjct: 1   MNVNYGRHTIIEVDLNALQRNFQQYKQAIPFGTAIMTVVKANAYGHGAVPIAKAVIEAGT 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V  V+EG++LR       I +               +L   + ++  L    ++  
Sbjct: 61  SHLAVAFVDEGIELREAGITVPILIFGYTPYEAIVDAITYDLSMTVYTIEDLHAIEEVAS 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
               +    +++DTG +R+GL L E   F       K  Q+  + +H ACAD+       
Sbjct: 121 QMEKNAYIHIKIDTGMSRIGLQLNEVTLFLQTLKCTKYIQVEGMYTHFACADERDKAYTL 180

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
           +Q E F+  +S  + +          +S+  +        + R GI+LYG     +   +
Sbjct: 181 MQQEVFQKAVSKAEELQIVIPWIHANNSAATIDMRETKGNMVRLGIALYGLYPSADVNQE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  +Q ++T ++++  I+K   G  VSYG     T +  IA   +GYADG    LS    
Sbjct: 241 AISLQPILTFKSKVAHIKKVKKGNGVSYGATYTATGEEWIATIPVGYADGVSRQLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   IK   VPI+G+I MD  M D+T  + I VGD +  +G      I +D
Sbjct: 298 --------KGFVLIKDVKVPIIGRICMDQLMLDVTKIMPIHVGDEVVFYGNQGEESISVD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            VA    T NY++   +  R  + Y
Sbjct: 350 CVADTLSTINYEITCMLSRRIPRIY 374


>gi|56751905|ref|YP_172606.1| alanine racemase [Synechococcus elongatus PCC 6301]
 gi|56686864|dbj|BAD80086.1| alanine racemase [Synechococcus elongatus PCC 6301]
          Length = 406

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S +   +++D  A+  N   +   L+ +    AVVK +AYG G   IA  +  AG     
Sbjct: 23  SYQRAWVEVDQGAIAANTRQIRQFLAPSCELMAVVKADAYGHGAVAIASTVLGAGATALG 82

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT--FYSKLMSCG 119
           V ++ EGV+LR     A I +L  IH   E        I    S P+        L   G
Sbjct: 83  VATIPEGVRLREAGITAPILLLGSIHSPDEVQAIAHWQIQPSLSTPKQALICAEALDRLG 142

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            S P  L++DTG +RLG   Q A++F          QL+ + SH A AD P       Q 
Sbjct: 143 QSLPVHLKLDTGMSRLGAPWQTAVEFLQLVHGLPSLQLASLYSHFATADSPDRAPLQQQH 202

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPM 232
             F   I+  +       +  +A+S+  LL  + H+   R G++LYG      +     +
Sbjct: 203 AAFEQAIAQIQAEGLPVPKLHIANSAATLLDSSLHYDQVRVGLALYGLYPAPHLGDRLSL 262

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ +AR+  +    AG+ VSYG +    R++ IAV  IGYADG P  LS        
Sbjct: 263 YPALSVKARVTHVTTLPAGQGVSYGHRYVTQRETPIAVVGIGYADGVPRALSNQM----- 317

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                 +   +G  +P +G ITMD  M DI+    +  GD + + G      I  DD A 
Sbjct: 318 ------EVLYRGQRLPQIGAITMDQMMIDISAMPQLAPGDVVTLLGRSGSEQITADDWAD 371

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            + T ++++L     R  +
Sbjct: 372 RANTISWEILCGFKDRLPR 390


>gi|187736490|ref|YP_001878602.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426542|gb|ACD05821.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
          Length = 368

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 164/375 (43%), Gaps = 17/375 (4%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            S      +IDL A+++N + +   +       VVK  AYG G E++   L + G+  F 
Sbjct: 4   TSPPRAWAEIDLGAIRHNLNVVKQAAKGEYYMPVVKAGAYGHGLEQVCRTLDSEGIAFFG 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V +V E  ++     + R ++L    P + + I        IS++ +   Y+ L    G 
Sbjct: 64  VANVGEARRISQAGCRTRPYILGPAFPEEREEIVLNGWRSFISTMEEAAHYNSLARLYGK 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  L VDTG  R G    +  +            L  + +HL CAD+    +   Q+ 
Sbjct: 124 TLPIHLSVDTGMGRGGFLPDQLEELLSRLGELDSLHLEGLGAHLPCADEDR-EITLRQIS 182

Query: 181 RFRTLISHYKGI----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-QTV 235
           RF  + +  +         LA+S+  L        + RPG+ LYG +   +      +  
Sbjct: 183 RFEQMAARIREKLPLKYCHLANSAASLDYEIPSNNMCRPGLVLYGFSPIPSPWAAQLKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   +R+ ++R    G  +SYGG       + +A   IGYADGY  +L            
Sbjct: 243 MALFSRLTVVRTLPEGHGISYGGTFVTDHPTRVATVGIGYADGYLRSL----------AH 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G +  + G   P+LG++TMD  M D++ +   E G   +I GP I + ++A  +GT ++
Sbjct: 293 KGARVMVDGVSCPLLGRVTMDQIMVDVSRAPHAEPGMTAEIMGPHIPVTELAEKAGTISW 352

Query: 356 DLLVRIGTRYAKFYT 370
           ++   IG R  + YT
Sbjct: 353 EIFTGIGPRVPRHYT 367


>gi|299133691|ref|ZP_07026885.1| alanine racemase [Afipia sp. 1NLS2]
 gi|298591527|gb|EFI51728.1| alanine racemase [Afipia sp. 1NLS2]
          Length = 396

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 195/364 (53%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW ++ + +  A  +AVVK +AYG G   +   L + G + FFV +++E 
Sbjct: 23  LTIDLDALATNWKALESRAVPAECSAVVKADAYGCGLTPVTRKLVSIGCKTFFVATLDEA 82

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQ 127
            + R   P+A I+VL G            +  PVI  + +L  + +   + G +   ALQ
Sbjct: 83  KRAREAAPKAAIYVLDGFFANCGDDFAKIDCRPVIGDLNELAEWDAFRRTRGWTGLAALQ 142

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG +  EA              ++L++SHLACA+D S+ +N+ QL  FR++ S
Sbjct: 143 IDTGMNRLGFTPDEARGLVPRIKQAD-HGIALVMSHLACAEDMSNAMNARQLAAFRSVAS 201

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + GI ASLA+SSGI LG ++H  + RPG +LYG        +PMQ VV  + RI  IR 
Sbjct: 202 EFSGITASLANSSGIFLGSHFHMDMVRPGAALYGVNPTPEADNPMQPVVGLKVRIAQIRN 261

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R + +A+ + GYADGY    SG++   S       +  + G   
Sbjct: 262 VPKGETVGYGALWHAKRPTRLAIVSAGYADGYFRAASGIEGTRS------AQAIVAGQRC 315

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI+G+I+MD+   DITD     I  G +I + G  + LD++    GT  Y++L  +G RY
Sbjct: 316 PIVGRISMDLMAIDITDVPHGGIRRGHFITLIGEGLTLDELGHHFGTIGYEVLTSLGRRY 375

Query: 366 AKFY 369
           A+ Y
Sbjct: 376 ARDY 379


>gi|157148050|ref|YP_001455368.1| alanine racemase [Citrobacter koseri ATCC BAA-895]
 gi|157085255|gb|ABV14933.1| hypothetical protein CKO_03857 [Citrobacter koseri ATCC BAA-895]
          Length = 359

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +  +     +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFEATDLPVISAQHLHTAVHNEEQLAALEAAGLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    +  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEKAEAFYQRLTQCKNVRQPVNIVSHFARADEPECGATEQQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +        +    Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLENQSTGEDFGCQPVMSLISS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWISERDTCLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  V I+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVTIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|58257632|dbj|BAD88777.1| alanine racemase [synthetic construct]
          Length = 359

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 165/368 (44%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                      +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEGQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G    ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGFPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|307823471|ref|ZP_07653700.1| alanine racemase [Methylobacter tundripaludum SV96]
 gi|307735456|gb|EFO06304.1| alanine racemase [Methylobacter tundripaludum SV96]
          Length = 362

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/362 (27%), Positives = 171/362 (47%), Gaps = 20/362 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ++L A+++N   + + + +A+  AV+K N YG G  +IA AL       F V  V+EG
Sbjct: 7   AVVNLDAVQHNLSKVRSCAPDAKVMAVIKANGYGHGMLRIAEALQQ--ADAFAVARVDEG 64

Query: 69  VKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           ++LR    + RI VL G     +   +    L  V+ S+ QL  +      G      L+
Sbjct: 65  IRLRKAGFKHRIAVLEGFTCAEELDELLHYQLDAVVHSLTQLEIFEAETKSGTCAV-WLK 123

Query: 128 VDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +D+G NRLG   +E        +    + Q   +++H A ADD +      Q+  F   I
Sbjct: 124 LDSGMNRLGFKAKEFDSVYQRLTQCALVKQPISLMTHFASADDINDDKTLRQINLFNETI 183

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARII 243
           S Y G E S+A+S+GIL          RPG+ L+G +   +   +   ++ V+   +R+I
Sbjct: 184 SGYSG-ERSMANSAGILGWEQSLTDWVRPGVMLHGISPFPDSTGRQLGLRPVMELHSRLI 242

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +++   G+ V YGG     + + + V AIGY DGYP               +G    + 
Sbjct: 243 AVKQIEVGDTVGYGGSWICEKPTTLGVVAIGYGDGYPR-----------YAKVGTPVLVN 291

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  VP++G+++MDM   D+      + GD + ++G  + ++++A  + T  Y L+  +  
Sbjct: 292 GRRVPLIGRVSMDMITVDLETEGHAKPGDLVTLWGEGLPVEEIARCADTIPYTLVCGVTQ 351

Query: 364 RY 365
           R 
Sbjct: 352 RV 353


>gi|281181122|dbj|BAI57452.1| alanine racemase [Escherichia coli SE15]
          Length = 359

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  +        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEANLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + G  + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDKAGAPVILWGEGLPVERIAEMTKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|114331518|ref|YP_747740.1| alanine racemase [Nitrosomonas eutropha C91]
 gi|122313683|sp|Q0AFV7|ALR_NITEC RecName: Full=Alanine racemase
 gi|114308532|gb|ABI59775.1| alanine racemase [Nitrosomonas eutropha C91]
          Length = 361

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  ID TAL++N   + + +  AR  AVVK +AYG G  +   AL       F V  
Sbjct: 3   RPIRALIDCTALQHNLSVVRSHTRQARIMAVVKADAYGHGLLRTTQALNT--ADGFAVLE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +E  ++LR       + +L G    +E    D   +  +    +                
Sbjct: 61  LEAAIQLREAGFNQPVLLLEGFFSAEELEAIDHYQLSTVIHSHEQLSLLLAHRKTGKPDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFR 183
            L+++TG NRLG   +E     +     +      +++H +CADD       + QL++F 
Sbjct: 121 YLKINTGMNRLGFRPEEESYVFNRIRQWRSDTSITLMTHFSCADDALEADQVNQQLDQFA 180

Query: 184 TLIS-HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
            L       +  +LA+S+ IL  P  H    RPGI LYG +   +K      ++ V+T  
Sbjct: 181 ALHDVKENNLPQTLANSAAILRYPGTHADWVRPGIVLYGASPLPDKTGIELGLRPVMTLT 240

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++II +++    + V YGGQ    +   I V A GYADGYP                G  
Sbjct: 241 SQIIAVQQLDPSDRVGYGGQFIANQPMRIGVVAAGYADGYPRHA-----------PTGTP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+I+MDM   D+       VG  + ++G  + +++VA ++ T +Y+LL 
Sbjct: 290 VLVNGQRTRLVGRISMDMLTVDLNGISEAGVGSPVTLWGEGLPVEEVAKSAQTISYELLT 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALSPRVP 356


>gi|254690758|ref|ZP_05154012.1| Alr, alanine racemase [Brucella abortus bv. 6 str. 870]
 gi|256255941|ref|ZP_05461477.1| Alr, alanine racemase [Brucella abortus bv. 9 str. C68]
 gi|260756329|ref|ZP_05868677.1| alanine racemase [Brucella abortus bv. 6 str. 870]
 gi|260882153|ref|ZP_05893767.1| alanine racemase [Brucella abortus bv. 9 str. C68]
 gi|297249298|ref|ZP_06932999.1| alanine racemase [Brucella abortus bv. 5 str. B3196]
 gi|260676437|gb|EEX63258.1| alanine racemase [Brucella abortus bv. 6 str. 870]
 gi|260871681|gb|EEX78750.1| alanine racemase [Brucella abortus bv. 9 str. C68]
 gi|297173167|gb|EFH32531.1| alanine racemase [Brucella abortus bv. 5 str. B3196]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 196/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKMMALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|254751429|ref|ZP_05203466.1| alanine racemase [Bacillus anthracis str. Vollum]
 gi|254758301|ref|ZP_05210328.1| alanine racemase [Bacillus anthracis str. Australia 94]
          Length = 408

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|78224104|ref|YP_385851.1| alanine racemase [Geobacter metallireducens GS-15]
 gi|123571083|sp|Q39RJ8|ALR_GEOMG RecName: Full=Alanine racemase
 gi|78195359|gb|ABB33126.1| alanine racemase [Geobacter metallireducens GS-15]
          Length = 379

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 29/386 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S      +IDL AL++N+  +           A+VK +AYG G   I+  L + GV  
Sbjct: 1   MDS-RPTIAEIDLAALRHNFEQVQRAVPAGCGILAIVKADAYGHGFMDISRELESLGVTA 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSC 118
           F V  + EG++LR       + +L G++PGQE+     NL   + S+ Q    +      
Sbjct: 60  FGVAFLAEGIQLRKSGIDRPVLILGGVYPGQERKCVGFNLSTAVFSLEQARVLNDTAARL 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VN 175
                  +++DTG  RLG++  EA  F       K  +L  IISH A AD+        +
Sbjct: 120 YRKAKIHVKIDTGMGRLGVAAAEAPAFFRELREMKSLELEGIISHFASADELDDDGRRFS 179

Query: 176 SVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q   F   ++  + +        +A+S+           L RPGI LYG     +   
Sbjct: 180 DRQAAVFAQSVAEARSLGLDPRYVHIANSAAAFGMDLPFCNLVRPGIVLYGALPSGDFEG 239

Query: 231 PM--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
            M  + ++  ++ + +++    G  +SY  +       LIA   +GYADGY   L+    
Sbjct: 240 KMALRPIMRLQSTVAMLKWVEPGTSISYARRYTAPDRRLIASVPVGYADGYSRALTNR-- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKL 343
                    G+  I+G   P++G + MD  M D+T    + VGD + + G D     ++ 
Sbjct: 298 ---------GEVLIRGTRAPVVGTVCMDWIMIDVTSVPGVAVGDEVTLLGCDRQGHCVRA 348

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +++A  +GT  Y++   I  R  + Y
Sbjct: 349 EELASWAGTIPYEIFCGISKRVPRVY 374


>gi|260167680|ref|ZP_05754491.1| Alr, alanine racemase [Brucella sp. F5/99]
 gi|261757116|ref|ZP_06000825.1| alanine racemase [Brucella sp. F5/99]
 gi|261737100|gb|EEY25096.1| alanine racemase [Brucella sp. F5/99]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|254703242|ref|ZP_05165070.1| Alr, alanine racemase [Brucella suis bv. 3 str. 686]
 gi|260567824|ref|ZP_05838293.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261753873|ref|ZP_05997582.1| alanine racemase [Brucella suis bv. 3 str. 686]
 gi|260154489|gb|EEW89570.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261743626|gb|EEY31552.1| alanine racemase [Brucella suis bv. 3 str. 686]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|225629379|ref|ZP_03787412.1| alanine racemase [Brucella ceti str. Cudo]
 gi|254705613|ref|ZP_05167441.1| Alr, alanine racemase [Brucella pinnipedialis M163/99/10]
 gi|256029226|ref|ZP_05442840.1| Alr, alanine racemase [Brucella pinnipedialis M292/94/1]
 gi|261313023|ref|ZP_05952220.1| alanine racemase [Brucella pinnipedialis M163/99/10]
 gi|265986214|ref|ZP_06098771.1| alanine racemase [Brucella pinnipedialis M292/94/1]
 gi|225615875|gb|EEH12924.1| alanine racemase [Brucella ceti str. Cudo]
 gi|261302049|gb|EEY05546.1| alanine racemase [Brucella pinnipedialis M163/99/10]
 gi|264658411|gb|EEZ28672.1| alanine racemase [Brucella pinnipedialis M292/94/1]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|23500650|ref|NP_700090.1| alanine racemase [Brucella suis 1330]
 gi|161620975|ref|YP_001594861.1| alanine racemase [Brucella canis ATCC 23365]
 gi|31076598|sp|Q8FVC1|ALR_BRUSU RecName: Full=Alanine racemase
 gi|189027529|sp|A9MCK3|ALR_BRUC2 RecName: Full=Alanine racemase
 gi|23464295|gb|AAN34095.1| alanine racemase [Brucella suis 1330]
 gi|161337786|gb|ABX64090.1| alanine racemase [Brucella canis ATCC 23365]
          Length = 396

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|197123899|ref|YP_002135850.1| alanine racemase [Anaeromyxobacter sp. K]
 gi|196173748|gb|ACG74721.1| alanine racemase [Anaeromyxobacter sp. K]
          Length = 395

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 155/373 (41%), Gaps = 19/373 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL +N   + A +  AR  AVVK NAYG G      A   AG     V  
Sbjct: 14  RPVWAEIDLDALAHNVRLLAARASPARLYAVVKANAYGHGAVACGRAALEAGAHGLAVVC 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           V+E  +LR    +A + V+          +    L P + ++  +    ++    G   P
Sbjct: 74  VDEAEELRRAGVEAPLLVIGNTPASDAARVVALRLRPAVGAMDLVEALSAEARRRGAEVP 133

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NR GLS    +     +      ++  + +H A A++        Q E  R
Sbjct: 134 IHLELESGLNRHGLSPDALVALAERARALPGLRVEGLFTHFAAAEEGDQRFTRAQFEVLR 193

Query: 184 TLISHYKGI-EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEA 240
                   + E   A+S+ ILL      +  R G+SLYG            ++ V++  A
Sbjct: 194 ETSRRLPWVPERHCAASASILLDHEMALEAVRGGLSLYGYRPAPWCGTDADLRPVMSLRA 253

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+  +     G  V YG      R + +A+   GYADGY  +                + 
Sbjct: 254 RVARVSDVDRGATVGYGRTWAANRPTRVALVMCGYADGYRRSFGNR-----------TQV 302

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            + G   P++G++ MDM M D+T    +  GD + + G D    +  DD+A  + T +++
Sbjct: 303 LVHGRRAPVVGRVAMDMCMVDVTAVPGVAAGDVVTLIGRDGDERVDADDLATIADTISWE 362

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 363 ILAGISARVPRLY 375


>gi|83269232|ref|YP_418523.1| alanine racemase [Brucella melitensis biovar Abortus 2308]
 gi|20531982|sp|Q8YD03|ALR_BRUME RecName: Full=Alanine racemase
 gi|123545437|sp|Q2YIU9|ALR_BRUA2 RecName: Full=Alanine racemase
 gi|82939506|emb|CAJ12478.1| Alanine racemase:Protein of unknown function
           UPF0001:ATP/GTP-binding site motif A (P-loop) [Brucella
           melitensis biovar Abortus 2308]
          Length = 396

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 196/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|17988719|ref|NP_541352.1| alanine racemase, catabolic [Brucella melitensis bv. 1 str. 16M]
 gi|62317251|ref|YP_223104.1| alanine racemase [Brucella abortus bv. 1 str. 9-941]
 gi|189022512|ref|YP_001932253.1| Alr, alanine racemase [Brucella abortus S19]
 gi|237816811|ref|ZP_04595803.1| alanine racemase [Brucella abortus str. 2308 A]
 gi|254695937|ref|ZP_05157765.1| Alr, alanine racemase [Brucella abortus bv. 3 str. Tulya]
 gi|254698537|ref|ZP_05160365.1| Alr, alanine racemase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731984|ref|ZP_05190562.1| Alr, alanine racemase [Brucella abortus bv. 4 str. 292]
 gi|256043789|ref|ZP_05446711.1| Alr, alanine racemase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111166|ref|ZP_05452202.1| Alr, alanine racemase [Brucella melitensis bv. 3 str. Ether]
 gi|260544489|ref|ZP_05820310.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260564974|ref|ZP_05835459.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260759757|ref|ZP_05872105.1| alanine racemase [Brucella abortus bv. 4 str. 292]
 gi|260762996|ref|ZP_05875328.1| alanine racemase [Brucella abortus bv. 2 str. 86/8/59]
 gi|261216365|ref|ZP_05930646.1| alanine racemase [Brucella abortus bv. 3 str. Tulya]
 gi|265990216|ref|ZP_06102773.1| alanine racemase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265992677|ref|ZP_06105234.1| alanine racemase [Brucella melitensis bv. 3 str. Ether]
 gi|17984530|gb|AAL53616.1| alanine racemase, catabolic [Brucella melitensis bv. 1 str. 16M]
 gi|62197444|gb|AAX75743.1| Alr, alanine racemase [Brucella abortus bv. 1 str. 9-941]
 gi|189021086|gb|ACD73807.1| Alr, alanine racemase [Brucella abortus S19]
 gi|237787624|gb|EEP61840.1| alanine racemase [Brucella abortus str. 2308 A]
 gi|260097760|gb|EEW81634.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260152617|gb|EEW87710.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|260670075|gb|EEX57015.1| alanine racemase [Brucella abortus bv. 4 str. 292]
 gi|260673417|gb|EEX60238.1| alanine racemase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260917972|gb|EEX84833.1| alanine racemase [Brucella abortus bv. 3 str. Tulya]
 gi|262763547|gb|EEZ09579.1| alanine racemase [Brucella melitensis bv. 3 str. Ether]
 gi|263000885|gb|EEZ13575.1| alanine racemase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 399

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 196/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|319898680|ref|YP_004158773.1| Alanine racemase [Bartonella clarridgeiae 73]
 gi|319402644|emb|CBI76189.1| Alanine racemase [Bartonella clarridgeiae 73]
          Length = 374

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID+ A+  N+ ++         +AVVK +AYGLG EKIAPALY AG + FF+  ++E 
Sbjct: 20  ATIDIGAIVANYKTLARRVAPIECSAVVKADAYGLGAEKIAPALYQAGCRTFFIAHLKEA 79

Query: 69  VKLRLYTPQARIFV-LYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           ++L+   PQ    V L GI    E+ +    ++PV++S   +  +       G   P  +
Sbjct: 80  LQLKAILPQNVTIVLLNGIPLTAEEFVAQAGIVPVLNSWHAIESWQMHCQKNGKKFPAVV 139

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E           +   +  IISHLA  DD +   N  Q    +T +
Sbjct: 140 QIDTNMNRLGLDQEELQWLIQTPTLFETADIKYIISHLANGDDITHTSNCAQKNAMKTAL 199

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +ASLA+S GI LGP+++F L RPGI+LYG          +++V+  +A++I  R
Sbjct: 200 AQLPACKASLANSGGIFLGPDFYFDLVRPGIALYGIDPHGKHPTSLKSVLKLKAQVIQSR 259

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG     + S++   +IGYADG+   LS             G  +  GY 
Sbjct: 260 YTEAGTPVGYGGSFITQQPSILTTISIGYADGWLRNLSN-----------KGSVYFNGYK 308

Query: 307 VPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+I+MD  + D T+      + GD++++ G    +++VA  +GT  Y++L  +G+R
Sbjct: 309 LPIIGQISMDSIIVDATNLKHKKPKRGDWVELIGIHQTIENVAADAGTIPYEILTSLGSR 368

Query: 365 YAKFY 369
           Y + Y
Sbjct: 369 YKRIY 373


>gi|65319386|ref|ZP_00392345.1| COG0787: Alanine racemase [Bacillus anthracis str. A2012]
          Length = 408

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    +  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAIAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLXKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELKRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG       +H +   Q  ++
Sbjct: 208 VNTAKELGIHIPYIHSSNSAGSMEPSNTFQNMVRVGIGIYGMYPSKEVNHSVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G     +I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEENIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|138893881|ref|YP_001124334.1| alanine racemase [Geobacillus thermodenitrificans NG80-2]
 gi|196250545|ref|ZP_03149235.1| alanine racemase [Geobacillus sp. G11MC16]
 gi|134265394|gb|ABO65589.1| Alanine racemase [Geobacillus thermodenitrificans NG80-2]
 gi|196209894|gb|EDY04663.1| alanine racemase [Geobacillus sp. G11MC16]
          Length = 384

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 154/378 (40%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     +IDL A+ +N  ++   L    +  AVVK NAYG G  ++A     AG     V
Sbjct: 5   HRDTWAEIDLDAIYDNVANLRRFLPDGTQVMAVVKANAYGHGDAQVATTALEAGASYLAV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR     A I VL    P   ++     +   +     L   + + +     
Sbjct: 65  AILDEALALRQKGINAPILVLGASRPADVELAARHRITLTVFRADWLEEAASIYNGSTPV 124

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++DTG  RLG+   +E    T          L  + +H A AD+ ++   S Q  R
Sbjct: 125 HLHLKMDTGMGRLGVKDEEETKRITTLIDRHPSFILEGVYTHFATADEVNTDYLSYQYRR 184

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+ +L  P   F + R GIS+YG     +      + ++  
Sbjct: 185 FLHMLEWLPSRPPIVHCANSATVLRFPERAFNMARFGISMYGLAPSPSIKPLLPYELKEA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ +++   GE VSYG       +  I    IGYADG+   L            
Sbjct: 245 FSLHSRLVHVKRLQPGEKVSYGATYTAQEEEWIGTLPIGYADGWLRRLQHF--------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  + + L +  G  + + G      I +DDVA    
Sbjct: 296 ---HVLVNGQKAPIVGRICMDQCMIRLPEPLPV--GTKVTLIGRQGDEFISVDDVARYLE 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 351 TINYEVPCTISYRVPRIF 368


>gi|294497061|ref|YP_003560761.1| alanine racemase [Bacillus megaterium QM B1551]
 gi|294346998|gb|ADE67327.1| alanine racemase [Bacillus megaterium QM B1551]
          Length = 396

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 93/381 (24%), Positives = 158/381 (41%), Gaps = 29/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +ID+ A+  N + +  L    +   AVVK NAYG G +++A     AG     V 
Sbjct: 16  RETWAEIDVEAIFQNVNHVRELIPGHKTLMAVVKANAYGHGDKEVAEIALQAGADMLAVA 75

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR    +  I VL  +     +   + ++     S   +   + ++       
Sbjct: 76  FLDEAIALRKKGIKESILVLGAVPTLHIQTALEWDVTVTAYSKAWIEEAASILDENSQLH 135

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++DTG  RLG+  +E L  T           L  + +H A AD+ +S     Q   F
Sbjct: 136 MHLKIDTGMGRLGVRTKEELHETMKIIASHSGFVLDGVFTHFATADELNSSYFEEQYTFF 195

Query: 183 RTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
             ++      ++       A+S+ +L  P   F   R GIS+YG +           P++
Sbjct: 196 EEMVRIVKEYNFTPPMIHCANSAALLRRPKDIFNGVRLGISMYGLSPSEELKEVLPIPLK 255

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
              +  +RI+ ++K   G  +SYG   +   D  IA   +GYADG+   LS         
Sbjct: 256 QAFSLHSRIVHVKKVKKGSHISYGATYEAKEDEWIATIPVGYADGWIRKLSNF------- 308

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                +  + G  VPI+G+I MD  M  +      ++G  +   G     +I +D+VA  
Sbjct: 309 -----EVLVDGVKVPIVGRICMDQLMIKLPKMY--KMGTKVTFIGKQKGAEITIDEVAKH 361

Query: 350 SGTTNYDLLVRIGTRYAKFYT 370
             T NY++   +  R  + YT
Sbjct: 362 LETINYEIPCMVAARVPRVYT 382


>gi|322834774|ref|YP_004214801.1| alanine racemase [Rahnella sp. Y9602]
 gi|321169975|gb|ADW75674.1| alanine racemase [Rahnella sp. Y9602]
          Length = 359

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 172/368 (46%), Gaps = 20/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G  +   +L +     + V+ + 
Sbjct: 4   ATAVIDRRALRHNLQRVRHLAPQSRLVAVVKANAYGHGLLETVHSLQD--ADYYGVSRLS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G     +  ++ +  L   + S+ QL                
Sbjct: 62  EALMLRKAGVVKPILLLEGFFSASELPLLIEHQLDTAVHSLEQLDALES-ADLARPLNVW 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L++DTG +RLG+   +A  F    S  K + Q   ++SH   AD+P S     QL  F  
Sbjct: 121 LKIDTGMHRLGVHPAQADAFYQRLSACKNVVQPVNMMSHFCRADEPESDATPKQLNCFNE 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
                 G + S+A+S GILL P  H  L RPGI LYG +           +Q V+T  + 
Sbjct: 181 FAEGKPG-QKSIAASGGILLWPESHMNLVRPGIILYGVSPMETGTASDFGLQPVMTLTSS 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG      RD+ + V A+GY DGYP +              G    
Sbjct: 240 LIAVREHAAGEPVGYGSTWVSNRDTRLGVVAMGYGDGYPRSAPN-----------GTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VP+ G+++MDM   D+    + +VGD +  +G  + ++ +A A+G + Y+L+ ++
Sbjct: 289 VNGREVPVAGRVSMDMITVDLGPDATDKVGDEVIFWGGKLPVERIAQATGISAYELITQL 348

Query: 362 GTRYAKFY 369
             R A+ Y
Sbjct: 349 SERVARVY 356


>gi|148379617|ref|YP_001254158.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|153933955|ref|YP_001383998.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|153934941|ref|YP_001387541.1| alanine racemase [Clostridium botulinum A str. Hall]
 gi|168180317|ref|ZP_02614981.1| alanine racemase [Clostridium botulinum NCTC 2916]
 gi|226948986|ref|YP_002804077.1| alanine racemase [Clostridium botulinum A2 str. Kyoto]
 gi|148289101|emb|CAL83195.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|152929999|gb|ABS35499.1| alanine racemase [Clostridium botulinum A str. ATCC 19397]
 gi|152930855|gb|ABS36354.1| alanine racemase [Clostridium botulinum A str. Hall]
 gi|182668797|gb|EDT80775.1| alanine racemase [Clostridium botulinum NCTC 2916]
 gi|226840935|gb|ACO83601.1| alanine racemase [Clostridium botulinum A2 str. Kyoto]
          Length = 389

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 162/384 (42%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKKKVNCKEIFAVVKANGYGHGALDIASTLLENGATRLS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  + E  +LR       I +L    P   + I D N+ PV+ S       SK  S    
Sbjct: 63  VACLSEATELREGGITCPINILGITPPTLFEDIIDYNIEPVVFSYDCANQLSKAASLKNR 122

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG     E+L+      +    ++  + SH + +D+     +  Q 
Sbjct: 123 IVKTHIAVDTGMGRLGFDPTVESLEEIKRIQDLSNIKIEGLCSHFSSSDEKDKSYSEYQF 182

Query: 180 ERF----RTLISHYKGIEASLA-SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           + F    + LI     I      +S+ I+  P+ +    R GI LYG    +    ++  
Sbjct: 183 KIFQNFRKKLIEMNMKIPIYHMSNSAAIIDLPSTYLDGVRAGIILYGYYPSMEVNKENLH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G+ V Y  + K  R S IA+  +GY DGY   LS       
Sbjct: 243 IKQVMTLKANIVHIKTIDSGKYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD + I G D         +D
Sbjct: 298 ------GKVIINGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGKDNINNLRYDAED 351

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G T+ +++  I  R  + Y
Sbjct: 352 IASKVGMTSGEIMSIISKRVPRVY 375


>gi|146283965|ref|YP_001174118.1| alanine racemase, catabolic [Pseudomonas stutzeri A1501]
 gi|166969424|sp|A4VQM5|ALR_PSEU5 RecName: Full=Alanine racemase
 gi|145572170|gb|ABP81276.1| alanine racemase, catabolic [Pseudomonas stutzeri A1501]
          Length = 358

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 165/368 (44%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DLTAL++N+      +   +  AVVK NAYG G  +   AL       F V  
Sbjct: 2   RPLVATVDLTALRHNYLLAKQCAPQRKAFAVVKANAYGHGAPEAVTALREI-ADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   +R   P+ARI +L G     E +      + +     +   +            
Sbjct: 61  LEEAEVIRGCAPEARILLLEGCFEPSEYLRAAELGLDIAVQDARQADWLLAADLARPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG S+    +               +ISH ACAD+    +   QLER+  
Sbjct: 121 WLKLDSGMHRLGFSVDGLRECHARLKGAAQVGELNLISHFACADERGHALTETQLERYAE 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+        SLA+S+ +L  P  H    RPGI LYG T     S     ++ V+T    
Sbjct: 181 LLELPFE-HCSLANSAAVLTLPQAHMAWIRPGIMLYGATPFAELSARELGLKPVMTLTGA 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V YG      R S I   + GYADGYP            +   G    
Sbjct: 240 LIAVRDVPVGESVGYGASWVAQRPSRIGTVSCGYADGYPR-----------TAPSGTSVV 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G  VP+ G+++MDM   D+TD    ++GD ++++G  + +D++A A GT  Y+LL ++
Sbjct: 289 IHGQRVPLAGRVSMDMLAVDLTDLPQAQLGDAVELWGAQMPIDELAQACGTIGYELLTKV 348

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 349 TGRVPRRY 356


>gi|15613083|ref|NP_241386.1| alanine racemase [Bacillus halodurans C-125]
 gi|20137241|sp|Q9KFF9|ALR_BACHD RecName: Full=Alanine racemase
 gi|10173133|dbj|BAB04239.1| alanine racemase [Bacillus halodurans C-125]
          Length = 388

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 90/384 (23%), Positives = 152/384 (39%), Gaps = 28/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNAR--TAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           H      +++DL A++ N  +   L  +      AVVK N YG G  +++ A   AG   
Sbjct: 3   HFYRDTWVEVDLDAIEQNVTNALRLYKDREMNLMAVVKANGYGHGAVEVSQAALRAGASY 62

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  ++E + LR     A I V+  +     ++     +   +  +  L      +   
Sbjct: 63  LSVAFLDEALALRKAGIDAPILVMGLVGAEHVQLAIKHRITLTVYQLDWLEQAISRLHTR 122

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL-SLIISHLACADDPSSHVNSVQ 178
                 L++DTG  R+GL  +E +    +            + +H A AD+        Q
Sbjct: 123 DKLAIHLKLDTGMGRIGLRRKEDIRSCMDFIASHECFELEGVFTHFATADEKDLTYFKKQ 182

Query: 179 LERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKS 229
            +RF   + + +  +         +S+  L  P  +F + R GI++YG T          
Sbjct: 183 CQRFNQWLEYIREWQLPIRYVHCGNSAAGLRFPEKNFNMFRFGIAMYGLTPSPEITDELP 242

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            P++   + ++R+  ++K   GE +SYG          I    IGYADG+    S     
Sbjct: 243 FPLKQAFSLKSRLSNVKKLPKGEGISYGATYVTEGAEWIGTLPIGYADGWIRHHSN---- 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                  GG   I G   P +G+I MD  M  +    S  +GD + + G      I +D+
Sbjct: 299 ------AGGHVLIDGKRAPFVGRICMDQCMIRLPKKHS--IGDTVTLIGESDGKQITMDE 350

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY++   I  R  + Y
Sbjct: 351 VAKRLNTINYEIPCVISWRVPRIY 374


>gi|145300176|ref|YP_001143017.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142852948|gb|ABO91269.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 357

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 18/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +I+  AL++N   +   + + +  AVVK NAYG G   +A  L +     + V  +EE 
Sbjct: 6   AQINTAALRHNLAVVKRHAPDCKIIAVVKANAYGHGLLPVARTLVD--ADAYAVARIEEA 63

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR       I +L G     +  +   N +       +     +           L++
Sbjct: 64  LMLRSCAVVKPIVLLEGFFSSADLPVLAANNLQTAVHTWEQLEALEQAELPAPVVAWLKL 123

Query: 129 DTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG +RLG+   E   F       K + Q   I++H + +D+        Q++ F  L +
Sbjct: 124 DTGMHRLGVRADEMPAFIARLAKCKNVVQPFNIMTHFSRSDELEQSTTREQIDLFSRLTA 183

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIIL 244
              G E ++A+S+GIL  P+ H    RPG+ LYG +   N     + +Q V+T + ++I 
Sbjct: 184 PLLG-ERAMANSAGILAWPDSHCDWVRPGVILYGVSPFPNTVAADYDLQPVMTLKTQLIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R   AGE V YG      RD+ + V AIGY DGYP                G    + G
Sbjct: 243 VRDHKAGEPVGYGANWVSDRDTRLGVIAIGYGDGYPRMAPN-----------GTSVLVNG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +VP++G+++MDMT  D+    + + GD   ++G  + ++ VA   GT  Y+L+ ++ +R
Sbjct: 292 RIVPLVGRVSMDMTTVDLGPGATDKAGDEAVLWGEGLPVERVADEIGTIPYELITKLTSR 351

Query: 365 YAKFY 369
               Y
Sbjct: 352 VFMEY 356


>gi|152979091|ref|YP_001344720.1| alanine racemase [Actinobacillus succinogenes 130Z]
 gi|171704339|sp|A6VP88|ALR_ACTSZ RecName: Full=Alanine racemase
 gi|150840814|gb|ABR74785.1| alanine racemase [Actinobacillus succinogenes 130Z]
          Length = 358

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 106/364 (29%), Positives = 174/364 (47%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK+N   ++  + +++  A+VK NAYG G E +A  +    V  F V  
Sbjct: 2   KPATAKISSLALKHNLELIHQKAPDSKMIAIVKANAYGHGVEFVASTVEEQ-VDGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    ++  +   N I  +    +     K          
Sbjct: 61  IEEALTLRSKGIIKPILLLEGFFSAKDLPVIAVNNIQTVVHNREQLEALKQTKLPNPIKV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E  D+         +  L   +SH + AD+  S    +QL RF 
Sbjct: 121 WLKIDTGMHRLGVALDEVEDYVEELKKCANVEPLIGYVSHFSRADELDSDYTRIQLNRFL 180

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
                  G    +A+S GIL  P+ H +  RPGI +YG +     +    +  V+T  + 
Sbjct: 181 QATEDKGG-PRCIAASGGILFWPDSHLEWIRPGIIMYGVSPTDTPSSEFGLIPVMTLTSS 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     +D+ I V AIGY DGYP  +             G   +
Sbjct: 240 LIAVRRHKAGEPVGYGGTWISKKDTKIGVIAIGYGDGYPRNI-----------PSGTPVY 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G +VPI+G+++MDM   D+ +  + +VGD + ++G ++ ++ VA   G  +Y+L+ ++
Sbjct: 289 INGRIVPIVGRVSMDMITVDLGEDCTDKVGDEVILWGKELPIETVAKHMGILSYELMTKL 348

Query: 362 GTRY 365
             R 
Sbjct: 349 TPRV 352


>gi|326388436|ref|ZP_08210032.1| alanine racemase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207168|gb|EGD57989.1| alanine racemase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 372

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 129/366 (35%), Positives = 186/366 (50%), Gaps = 17/366 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL AL  N+  +      A+ A VVK + YGLG   +A  L + G + F V  + 
Sbjct: 5   ATLTIDLGALAANYRLIRQQVSPAQVAGVVKADGYGLGAALVARTLIDEGCRHFCVALLG 64

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           E   L  +   +A +FVL G+ PG E        IPV++S+ Q+  +S      G   P 
Sbjct: 65  EAAALVPHVRGEADVFVLNGLLPGDEAECATLGAIPVLNSLDQIELWSAQARARGRKLPA 124

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            LQ DTG +R+GLS +E               +  +ISHLACADDP++  N+ Q ERFR 
Sbjct: 125 MLQFDTGMSRMGLSPEEIDRLLATPDVLDPIDVRFLISHLACADDPTAAANAEQAERFRA 184

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           + +H+ G+  +L +S G  L    HF L R GI+LYGG  +   + PM  VV  EARI  
Sbjct: 185 ITAHFPGVPRALDNSGGSFLDRG-HFDLVRAGIALYGGAPRAGAN-PMHAVVALEARIAQ 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R   AG  V YG   +  R++ IA   +GYADG+P  L              G  +I G
Sbjct: 243 LRTIPAGTGVGYGLTFRAERETRIATIQVGYADGWPRCLGNR-----------GAAYIGG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIE--VGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
              PI G+++MD    D+TD  +     G  +++ GP   +DDVA  +GT +Y++L ++ 
Sbjct: 292 VRAPIAGRVSMDSITLDVTDVPAEHLFPGAPVELVGPHQSIDDVANDAGTISYEILTQLS 351

Query: 363 TRYAKF 368
            RY + 
Sbjct: 352 RRYDRI 357


>gi|332083545|gb|EGI88765.1| alanine racemase [Shigella boydii 5216-82]
          Length = 359

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEKAETFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     R++ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERNTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+        GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPQAQDNAGDSVILWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|328956604|ref|YP_004373990.1| alanine racemase [Carnobacterium sp. 17-4]
 gi|328672928|gb|AEB28974.1| alanine racemase [Carnobacterium sp. 17-4]
          Length = 390

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 103/382 (26%), Positives = 158/382 (41%), Gaps = 26/382 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S+     +I L  ++NN  +    LS N    AVVK + YG G ++IA     AG     
Sbjct: 5   SSRETWAEISLDNVENNIKNFKKILSSNTALMAVVKADGYGHGAKEIAETAIEAGATYLA 64

Query: 62  VTSVEEGVKLRLYTPQARIFV--LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           V  ++E V LR       I V     +     +   D  L   + S   +    +L    
Sbjct: 65  VAFLDEAVVLRKAGFSIPILVLGYTSLDTETIEKAIDYGLTLTVYSKEAVEIIQQLADQK 124

Query: 120 VS-HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L++D+G NR+G+   E       S       L  I +H A AD   S     Q
Sbjct: 125 KKVCRIHLKIDSGMNRIGVRTAEEALQIVASITSDYLLLEGIFTHFADADAIESTFVHEQ 184

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM- 232
            + F  + S  +            +++  +  P  H  + R GI LYG   + +    + 
Sbjct: 185 FDHFMHITSKIQEAGYTISLKHCCNTAATIAFPEMHLDMVRIGIGLYGLYPEQHLQDHIE 244

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  +T + + ILI+K  AG+ VSYG     T DS+IA   +GYADG+   LS       
Sbjct: 245 LKPAMTFKTKPILIKKVPAGQSVSYGRTYTTTTDSIIATIPVGYADGFSRALSN------ 298

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                 G   I GY  PI+G++ MD TM D+T+   +     I +FG      I + +VA
Sbjct: 299 -----NGNVTIDGYKAPIVGRVCMDQTMVDLTEIDPVHFDKEIVLFGDSKDSCISISEVA 353

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +G R  + Y
Sbjct: 354 TQMNTIHYEVACLVGKRVPRVY 375


>gi|309787539|ref|ZP_07682151.1| alanine racemase [Shigella dysenteriae 1617]
 gi|308925117|gb|EFP70612.1| alanine racemase [Shigella dysenteriae 1617]
          Length = 353

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/364 (28%), Positives = 166/364 (45%), Gaps = 19/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +EE ++
Sbjct: 2   INRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLEEALR 59

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       + +L G    ++                +     +  S        +++DT
Sbjct: 60  LRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDT 119

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T     
Sbjct: 120 GMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGK 179

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILI 245
            G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + +I +
Sbjct: 180 PG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 238

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   GE V YGG     RD+ + V A+GY DGYP                G    + G 
Sbjct: 239 REHKVGEPVGYGGTWISERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGR 287

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+ +R 
Sbjct: 288 EVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELIARLTSRV 347

Query: 366 AKFY 369
           A  Y
Sbjct: 348 AMKY 351


>gi|254700123|ref|ZP_05161951.1| Alr, alanine racemase [Brucella suis bv. 5 str. 513]
 gi|261750615|ref|ZP_05994324.1| alanine racemase [Brucella suis bv. 5 str. 513]
 gi|261740368|gb|EEY28294.1| alanine racemase [Brucella suis bv. 5 str. 513]
          Length = 399

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAAYAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|157825267|ref|YP_001492987.1| alanine racemase [Rickettsia akari str. Hartford]
 gi|166969426|sp|A8GM54|ALR_RICAH RecName: Full=Alanine racemase
 gi|157799225|gb|ABV74479.1| alanine racemase [Rickettsia akari str. Hartford]
          Length = 355

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 185/365 (50%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+++A+KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV + EEG
Sbjct: 6   LEINISAIKNNYLLLQGICKTSLVGAAVKANGYGLGAVQISKALIKENCRYFFVATSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRKALGLDVDILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKHRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL  F+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNIFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG    +         VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPVMK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI G  
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINGRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+I+MD+   D+TD   +++  G   +I G     D +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRISMDLINIDVTDLPPLDIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTSLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRIY 353


>gi|158520074|ref|YP_001527944.1| alanine racemase [Desulfococcus oleovorans Hxd3]
 gi|254802360|sp|A8ZRV0|ALR_DESOH RecName: Full=Alanine racemase
 gi|158508900|gb|ABW65867.1| alanine racemase [Desulfococcus oleovorans Hxd3]
          Length = 390

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 34/386 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A+ +N  ++ AL+    R  A VK + YG G  ++A     +G     V+ +
Sbjct: 6   AWAEIDLDAVAHNVAALKALTRPACRLMAAVKADGYGHGMCEVASVALESGASALGVSRI 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           +E + LR +   A I VL      + + + D NLI  + ++ +    S+  +  G +   
Sbjct: 66  DEALDLRNHGITAPILVLGHTPAHRCREMVDQNLIQTVCALAEAQALSRAATAIGATVSV 125

Query: 125 ALQVDTGFNRLGLS---------LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
            L+VDTG  RLG++          + A+       +        + +H ACAD       
Sbjct: 126 HLKVDTGMGRLGINTVVPGRTAPQEAAVKEALAVLDLPGLAAEGVFTHFACADSADKTHA 185

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
           + Q +RF TLI   +           A+S+ ++  P  H  + R GI++YG         
Sbjct: 186 NAQFKRFSTLIQELEAAGRPVAVRHAANSAALIDMPETHLDMVRAGIAIYGLYPSAEVDR 245

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++  +  + R+  ++K  AG  VSYG      + +++AV ++GYADG    LS   
Sbjct: 246 QKVALKPAMAFKTRVAQVKKVPAGFTVSYGATYTTPKPTVLAVVSVGYADGLNRLLSSR- 304

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                     G   ++G  VP++G+I MD+TM D+     + VGD + IFG      I  
Sbjct: 305 ----------GFMLVRGCRVPLVGRICMDLTMLDVGGVPDVAVGDEVVIFGSQNGAFIGA 354

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           D++A A  T +Y+++  I  R  + Y
Sbjct: 355 DEIADALNTISYEVVTSITGRVPRVY 380


>gi|295702426|ref|YP_003595501.1| alanine racemase [Bacillus megaterium DSM 319]
 gi|294800085|gb|ADF37151.1| alanine racemase [Bacillus megaterium DSM 319]
          Length = 396

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 94/381 (24%), Positives = 158/381 (41%), Gaps = 29/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +ID+ A+  N + +  L   +    AVVK NAYG G +++A     AG     V 
Sbjct: 16  RETWAEIDVEAIFQNVNHVRELIPVHKTLMAVVKANAYGHGDKEVAEIALQAGADMLAVA 75

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR    +  I VL  +     +   + ++     S   +   + ++       
Sbjct: 76  FLDEAIALRKKGIKESILVLGAVPTLHIQTALEWDVTVTAYSKAWIEEAASILGENSQLH 135

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++DTG  RLG+  +E L  T           L  + +H A AD+ +S     Q   F
Sbjct: 136 MHLKIDTGMGRLGVRTKEELHETMKIIASHSGFVLDGVFTHFATADELNSSYFEEQYTFF 195

Query: 183 RTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
             ++      ++K      A+S+ +L  P   F   R GIS+YG +           P++
Sbjct: 196 EEMVRIVKEYNFKPPMIHCANSAALLRRPKDIFNGVRLGISMYGLSPSEELKEVLPIPLK 255

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
              +  +RI+ ++K   G  +SYG   +   D  IA   +GYADG+   LS         
Sbjct: 256 QAFSLHSRIVHVKKVKKGSHISYGATYEAKEDEWIATIPVGYADGWIRKLSNF------- 308

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                +  + G  VPI+G+I MD  M  +      + G  +   G     +I +D+VA  
Sbjct: 309 -----EVLVDGVKVPIVGRICMDQLMIKLPKMY--KTGTKVTFIGKQKGAEITIDEVAKH 361

Query: 350 SGTTNYDLLVRIGTRYAKFYT 370
             T NY++   +  R  + YT
Sbjct: 362 LETINYEIPCMVAARVPRVYT 382


>gi|170760162|ref|YP_001787063.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
 gi|169407151|gb|ACA55562.1| alanine racemase [Clostridium botulinum A3 str. Loch Maree]
          Length = 389

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 161/384 (41%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKKKVNCKEIFAVVKANGYGHGALDIASTLLENGATRLS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  + E  +LR       I +L    P   + I D N+ PV+ S       SK  S    
Sbjct: 63  VACLSEATELRKGGITCPINILGITPPTLFEDIIDYNIEPVVFSYDYANQLSKAASLKNR 122

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG     E+L+      +    ++  + SH + +D+     +  Q 
Sbjct: 123 IVKTHIAVDTGMGRLGFDPTVESLEEIKRIQDLSNIKIEGLCSHFSSSDEKDKSYSEYQF 182

Query: 180 ERF----RTLISHYKGIEASLA-SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           + F    + LI     I      +S+ I+  P+ +    R GI LYG    +    ++  
Sbjct: 183 KIFQNFRKKLIEMNMRIPIHHMSNSAAIIDLPSTYLDAVRAGIILYGYYPSMEVNKENLH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G  V Y  + K  R S IA+  +GY DGY   LS       
Sbjct: 243 IKQVMTLKANIVHIKTIDSGRYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD + I G D         +D
Sbjct: 298 ------GKVIINGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGKDNINNLRYDAED 351

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G T+ +++  I  R  + Y
Sbjct: 352 IASKVGMTSGEIMSIISKRVPRVY 375


>gi|145632963|ref|ZP_01788696.1| alanine racemase [Haemophilus influenzae 3655]
 gi|144986619|gb|EDJ93185.1| alanine racemase [Haemophilus influenzae 3655]
          Length = 360

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L  + V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQS-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  I    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETIVHNREQLEALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPKSHLECIRPGIIIYGISPTDTIGKEFDLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP             V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|282860859|ref|ZP_06269925.1| alanine racemase [Streptomyces sp. ACTE]
 gi|282564595|gb|EFB70131.1| alanine racemase [Streptomyces sp. ACTE]
          Length = 384

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 93/380 (24%), Positives = 158/380 (41%), Gaps = 29/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N   + A +  A+  AVVK +AYG G    A A   AG       + 
Sbjct: 8   RARAEIDLAALRANVRVLRARASGAQLMAVVKSDAYGHGALPCARAALEAGATWLGTATP 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR      R+        G  +   + ++   +S +           + G     
Sbjct: 68  QEALALREAGVGGRVMCWLWTPGGPWREAIEADIDVSVSGMWALREVVEAATAAGRPARV 127

Query: 125 ALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G    +  +       +      +++ + SH ACAD+P     + QL  
Sbjct: 128 QLKADTGLGRNGCQPADWPELVSAARGAEEAGTLRVTGLWSHFACADEPGHPSIAAQLTA 187

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPM 232
           FR +++       +     +A+S   L  P  HF L R GI++YG +            +
Sbjct: 188 FRDMVAYAEKEGVRPEVRHIANSPATLTLPESHFDLVRTGIAMYGLSPSPALGTPADFGL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A + L+++   G  +SYG     + ++ +A+  +GYADG P   SG       
Sbjct: 248 RPVMTLSASVALVKEVPPGHGISYGHHYTTSAETTLALVPLGYADGIPRHASGR------ 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   I G +  + G++ MD  + D+        G    +FGP    +   +D A+
Sbjct: 302 -----GPVLIDGAVRTVAGRVAMDQFVVDLGGDTP-RPGARAVLFGPGDQGEPGAEDWAV 355

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
           A+ T  Y+++ RI  R  + 
Sbjct: 356 AADTIGYEIVTRISGRVPRV 375


>gi|327482293|gb|AEA85603.1| alanine racemase, catabolic [Pseudomonas stutzeri DSM 4166]
          Length = 358

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 165/368 (44%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DLTAL++N+      +   +  AVVK NAYG G  +   AL       F V  
Sbjct: 2   RPLVATVDLTALRHNYLLAKQCAPQRKAFAVVKANAYGHGAPEAVTALREI-ADGFAVAC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   +R   P+ARI +L G     E +      + +     +   +            
Sbjct: 61  LEEAEVIRGCAPEARILLLEGCFEPSEYLRAAELGLDIAVQDARQADWLLAADLARPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG S+    +               +ISH ACAD+    +   QLER+  
Sbjct: 121 WLKLDSGMHRLGFSVDGLRECHARLKGAPQVGELNLISHFACADERGHALTETQLERYAE 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
           L+        SLA+S+ ++  P  H    RPGI LYG T     S     ++ V+T    
Sbjct: 181 LLELPFE-HCSLANSAAVVTLPQAHMAWIRPGIMLYGATPFAELSARELGLKPVMTLTGA 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V YG      R S I   + GYADGYP            +   G    
Sbjct: 240 LIAVRDVPVGESVGYGASWVAQRPSRIGTVSCGYADGYPR-----------TAPSGTSVV 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G  VP+ G+++MDM   D+TD    ++GD ++++G  + +D++A A GT  Y+LL ++
Sbjct: 289 IHGQRVPLAGRVSMDMLAVDLTDLPQAQLGDAVELWGAQMPIDELAQACGTIGYELLTKV 348

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 349 TGRVPRRY 356


>gi|114328882|ref|YP_746039.1| alanine racemase [Granulibacter bethesdensis CGDNIH1]
 gi|114317056|gb|ABI63116.1| alanine racemase [Granulibacter bethesdensis CGDNIH1]
          Length = 360

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 128/366 (34%), Positives = 187/366 (51%), Gaps = 13/366 (3%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             RL+IDL A+  NW  +    G  R   AVVK + YGLG   IA  L   G    FV  
Sbjct: 1   MARLEIDLEAIAANWRFLRTTHGTNRITGAVVKADGYGLGAAVIAQRLVQEGCDHIFVAH 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-P 123
            +E + LR   P A + VL G+ PG E    D  LIP + S+ ++  + +  +      P
Sbjct: 61  PQEALTLRPLIPSATLIVLNGLWPGWEAAYTDHGLIPALGSLAEIEAWRQEATRREQALP 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L VDTG NRLGL  QE               L  I++HL  A+ P    N++Q +RF 
Sbjct: 121 AFLHVDTGINRLGLDPQERDRLAERPELLDGITLRAIMTHLISAEIPDHDSNTLQRQRFA 180

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
              S       S+A+SSGI LGP++   + RPG +LYG      + +PM+ V+   AR++
Sbjct: 181 AACSRLPPAPRSIANSSGIFLGPDFASDIARPGAALYGINPVPGRPNPMRPVLRLSARVL 240

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            IR   AGE+V Y G     R S IAV ++GYADG+   LS              +    
Sbjct: 241 QIRPVEAGEIVGYNGIWVAQRPSRIAVCSVGYADGFQRALSSR-----------AEAAFD 289

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  +P++G+++MD+T +D+TD   I VG ++++ GP++  D+VA  + T  Y++L  +G 
Sbjct: 290 GARIPLVGRVSMDLTTYDVTDDPRITVGSWLELIGPEVSPDEVAARASTNGYEVLTSLGR 349

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 350 RYERVY 355


>gi|54293722|ref|YP_126137.1| hypothetical protein lpl0775 [Legionella pneumophila str. Lens]
 gi|81822433|sp|Q5WYG1|ALR_LEGPL RecName: Full=Alanine racemase
 gi|53753554|emb|CAH15009.1| hypothetical protein lpl0775 [Legionella pneumophila str. Lens]
          Length = 357

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 176/367 (47%), Gaps = 19/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +  L+   +  A+VK NAYG G  ++AP L +  ++ F V 
Sbjct: 2   SRPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVL-DGRIEAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +EE + +R    +    +  G+    E  +  + +   V+    QL +  K        
Sbjct: 61  CLEEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAKQLEWLIKT-PLPYPI 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              ++V+TG +RLG  + E             + +   +++HLACAD+P    N  Q+  
Sbjct: 120 KVWVKVNTGMHRLGFKIHELQKVMDALQTCTWVDKNIGLMTHLACADEPHRPENQQQISL 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTA 238
           F+  IS     + S+A+S+ I+  P+    + RPGI LYG +   N+      +  V+  
Sbjct: 180 FQE-ISIPGFRQRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNARDLGLIPVMRF 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  I    +   V YGG  K  + S I + A GY DGYP  +S              
Sbjct: 239 MSAISAIHDNPSFAQVGYGGTWKSDKPSRIGIVAAGYGDGYPRHIS-----------EKT 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
             +++G  V I+G+++MDM   D+T+   +E+GD ++++G  + ++ +A ++GT  Y+LL
Sbjct: 288 PVWVRGREVSIVGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTIGYELL 347

Query: 359 VRIGTRY 365
            +I  R 
Sbjct: 348 CQISERV 354


>gi|323144440|ref|ZP_08079044.1| alanine racemase [Succinatimonas hippei YIT 12066]
 gi|322415779|gb|EFY06509.1| alanine racemase [Succinatimonas hippei YIT 12066]
          Length = 359

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 162/367 (44%), Gaps = 19/367 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
              +I+  ALKNN   +      ++  AVVK NAYG G  ++A ALY   V  F V  ++
Sbjct: 4   ATAEINTQALKNNIDIIKTYVPGSKIVAVVKANAYGHGLYQVASALYEK-VDAFAVARLD 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR    +  I +L G    ++      + I       +     +           L
Sbjct: 63  EALNLREQGIKKPIILLEGFFNEEDLPFIARSEIYTAVHDMEQLEAIERAKVEKPLHCWL 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSS-HVNSVQLERFRT 184
           ++D G +RLG   Q+ L+            +   +ISHL+ AD P+    N  Q+  FR 
Sbjct: 123 KIDIGMHRLGADPQDVLNMKERLEKCPNVLKPIGLISHLSVADTPTETDYNIAQINYFRE 182

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
              H+ G +  L++S+GIL  P+ H    RPGI +YG +   +K      ++ V+T ++ 
Sbjct: 183 TAKHFSG-DLCLSNSAGILAWPDSHTPWVRPGIIMYGISPFEDKVGSDFGLKPVMTLKSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II IRK   G  V YG       D+ I + A GY DGYP                G    
Sbjct: 242 IIAIRKVKKGAKVGYGAAWTAPYDTTIGIVATGYGDGYPRVAPN-----------GTPVL 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G  VP  G + MDM   D+  +   +VGD   ++G  + ++ +A   GT  Y+L+ R+
Sbjct: 291 INGKYVPTAGHVCMDMMFVDLGLNSQDKVGDEAILWGKGLPVEKIAKLCGTIPYELVCRV 350

Query: 362 GTRYAKF 368
             R  + 
Sbjct: 351 MPRV-RV 356


>gi|288554966|ref|YP_003426901.1| alanine racemase [Bacillus pseudofirmus OF4]
 gi|190403006|gb|ACE78171.1| alanine racemase [Bacillus pseudofirmus]
 gi|288546126|gb|ADC50009.1| alanine racemase [Bacillus pseudofirmus OF4]
          Length = 369

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 103/382 (26%), Positives = 164/382 (42%), Gaps = 29/382 (7%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M ++ F     +I L ALK N  S  A   S   R  AVVK + YG G    A +  N G
Sbjct: 1   MKTSSFRNTYAQISLQALKENAASFKASLQSPACRLMAVVKGDGYGHGAVAAASSALNGG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIF-DTNLIPVISSVPQLTFYSKL 115
                V  ++E ++LR    +A I VL    P   +        + V S+  +       
Sbjct: 61  ADYLGVAILDEAIELRDAGVEAPILVLGYTSPHALREAISRNITLTVFSTDVRDALLEVA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                     ++ +TG  R+G+   +E LD     ++    ++  I +H A AD+  S  
Sbjct: 121 SEAESPIKVHIKTETGMGRVGVQTKEELLDVMTPLYHHNNIEVEGIFTHFAEADNLQSTY 180

Query: 175 NSVQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              Q  RF + I                +S+G L   + H  + R GISLYG    ++  
Sbjct: 181 TDEQFARFLSFIEAIEKDDMHVPIKHCCNSAGTLFHKDKHLDMVRVGISLYGLRPDVSLE 240

Query: 230 HPM--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            P+     +   + I+ +RK   G  +SYG   KL+ + ++A   IGYADG    LS   
Sbjct: 241 FPIELTQAMRLFSSIVSLRKLPEGSSISYGRTHKLSSEKVVATMPIGYADGLSRALSN-- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVA 347
                     G   + G   PILG++ MD TM D+TD     +GD+++       +D++A
Sbjct: 299 ---------KGFVTLHGQKAPILGRVCMDQTMIDVTDIPDAALGDHVEF-----PIDEMA 344

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             +GT NY+++  +  R  ++Y
Sbjct: 345 ELTGTINYEIVCAVSKRVPRYY 366


>gi|85858827|ref|YP_461029.1| alanine racemase [Syntrophus aciditrophicus SB]
 gi|85721918|gb|ABC76861.1| alanine racemase [Syntrophus aciditrophicus SB]
          Length = 661

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 105/375 (28%), Positives = 170/375 (45%), Gaps = 25/375 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +++DL +   NW  +  L G A R   VVK +AYG G  +I+      G     V + +
Sbjct: 12  WVEVDLDSFTWNWAELRRLVGPAVRVLQVVKADAYGHGAIEISHTALKNGAACLGVANAD 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPYA 125
           EGV+LR+    A I +L     G+ + I    L P +S +     F   L   GV+ P  
Sbjct: 72  EGVQLRVSGITAPIIILSPSTGGEIREIIKYGLTPSLSDLLFASEFQRHLARAGVTSPVH 131

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG  R G+  +EA     N F      +  I +HLA ++      N  Q   FR L
Sbjct: 132 IEIDTGMGRGGMLCEEAPAIIRNIFGLPNIAVEGIFTHLASSEVCVD-YNEQQWSLFREL 190

Query: 186 ISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTA 238
                 +        +A+S  IL  P +H  + RPG+  YG            ++ V++ 
Sbjct: 191 TDRLNAMGISIPIKHMANSGAILNYPRFHLDMVRPGLMSYGIHPAPSTEDRADLRPVMSF 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           + R++L+++  AG  + Y       R S IA   +GY DGY + LS             G
Sbjct: 251 KTRVVLLKEFPAGASIGYNRTYVTERPSRIATLPVGYGDGYGVILSNQ-----------G 299

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
           +  I+G   P++G+I+MDMT  D++      +GD + + G      I  +D+A+   T +
Sbjct: 300 EVLIRGRRAPVVGRISMDMTTVDVSAIPDCHIGDEVVLMGRQGEEVISANDIAVRVRTIS 359

Query: 355 YDLLVRIGTRYAKFY 369
           YD+L  +G R  + +
Sbjct: 360 YDILCALGKRAPRIF 374


>gi|239947144|ref|ZP_04698897.1| alanine racemase [Rickettsia endosymbiont of Ixodes scapularis]
 gi|239921420|gb|EER21444.1| alanine racemase [Rickettsia endosymbiont of Ixodes scapularis]
          Length = 354

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+L+A+KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV S EEG
Sbjct: 6   LEINLSAIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRKALGVDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGL+  E     +N    K   L  IISHLA ++   +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLTHDEIEQLINNRDLLKGLDLQYIISHLAISEKIDNSYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG    +         V  +A II ++
Sbjct: 186 RYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPVMK------NPVNLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADGY    S             G+ FI G  
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGYSCNFSNQ-----------GEVFINGCS 288

Query: 307 VPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+I+MD+   D+TD     I +G   +I G     D VA   GT  Y++L  +G R
Sbjct: 289 VPIVGRISMDLINIDVTDLPPSDIFLGQEAEIIGNHCTPDKVASIIGTIGYEVLTSLGNR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRIY 353


>gi|160879061|ref|YP_001558029.1| alanine racemase [Clostridium phytofermentans ISDg]
 gi|160427727|gb|ABX41290.1| alanine racemase [Clostridium phytofermentans ISDg]
          Length = 389

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 93/384 (24%), Positives = 161/384 (41%), Gaps = 29/384 (7%)

Query: 3   SNEFLRLK--IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +  +LR+   I+L A+ +N       +       AV+K + YG G   IA A  +  V+ 
Sbjct: 7   NQRYLRVSANINLDAIIHNVAEARKNIKKETGIFAVIKADGYGHGAVPIARA-IDNDVEA 65

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
           + V  VEEG++LR       I +L    P     I   +L   +  +           + 
Sbjct: 66  YAVAIVEEGIELREAGITKPILILGYTAPELLTEIVQYDLTQTVFQLSMAEKLDEIARTL 125

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      +++DTG +R+G     E++D            L  I +H+ACAD         
Sbjct: 126 GKVAKIHIKLDTGMSRIGYQPTAESIDEIVRMKKLSNLMLEGIFTHMACADMTDKTSAKK 185

Query: 178 QLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP- 231
           Q E F   ++  +          +++S+G +  P  +  + R GISLYG           
Sbjct: 186 QFELFTAFVNQLEEQGVKLPIQHISNSAGTIDLPEMNLSMVRFGISLYGLYPSEEVDKNH 245

Query: 232 --MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +  +  I  +++   G  + YG      +   IA   +GY DG+P  LS +   
Sbjct: 246 LSLEPAMELKTHISFVKELEPGHGIGYGSTFVTKKTMTIATVPVGYGDGFPRQLSNV--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G+  + G   PI+G+I MD  M D+TD   ++ GD + + G D    I +++
Sbjct: 303 --------GRVLVHGEFAPIVGRICMDQFMIDVTDIPEVKQGDIVTLVGRDGDNIIPVEE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A  +G+ NY+ +  +G R  + Y
Sbjct: 355 PADLAGSFNYEFVCNVGKRIPRVY 378


>gi|90414458|ref|ZP_01222434.1| alanine racemase [Photobacterium profundum 3TCK]
 gi|90324463|gb|EAS41022.1| alanine racemase [Photobacterium profundum 3TCK]
          Length = 359

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL +N   ++  + N++  AVVK N YG G   +A +L +     F V  +EE + 
Sbjct: 8   INTDALTHNIRQLHLQAPNSKLLAVVKANGYGHGLLHVAKSLPD--ADAFGVARIEEALT 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G +   +  I  TN I  +    +     +           L++DT
Sbjct: 66  LRAGGVVKPILLLEGFYGASDLPIIVTNNIHTVVHSIEQLEALESAELDNQAVVWLKIDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++  DF         + +    +SH  CADD +S+V + Q+  F +L    
Sbjct: 126 GMHRLGVRPEQLDDFVQRLHACDNVAKPLRYMSHFGCADDLTSNVTNQQINTFLSLTEGC 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTAEARIIL 244
            G E SLA+S+GIL  P+   +  RPGI +YG +  I          +Q V+T  + +I 
Sbjct: 186 SG-ERSLAASAGILAWPDSQLEWIRPGIIMYGVSPFIEPDRSAEAFNLQPVMTLTSSLIA 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R    GE V YGG     RD+ + V AIGY DGYP T              G    + G
Sbjct: 245 VRDVKEGEQVGYGGIWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVLVNG 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +VP+ G+++MDM   D+  +   +VGD   ++G  +  + VA   GT  Y+L+ ++ +R
Sbjct: 294 RIVPMAGRVSMDMLTVDLGPNAQDKVGDEAVLWGNGLPAEVVAEHIGTIAYELVTKLTSR 353

Query: 365 YAKFY 369
               Y
Sbjct: 354 VDMTY 358


>gi|298291077|ref|YP_003693016.1| alanine racemase [Starkeya novella DSM 506]
 gi|296927588|gb|ADH88397.1| alanine racemase [Starkeya novella DSM 506]
          Length = 374

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 139/363 (38%), Positives = 205/363 (56%), Gaps = 11/363 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL+AL  N+  + A    A+ AAVVK +AYGLG    A  L++AG + FFV  + E 
Sbjct: 15  LTIDLSALAANFRDVAARVAPAKCAAVVKGDAYGLGLVPTASTLWHAGARTFFVALLSEA 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQ 127
            KLR   P A IFVL G+ PG E       L+PV+ SVP++  +       G   P AL 
Sbjct: 75  RKLRELLPDAEIFVLNGLFPGTEATYQQHALLPVLGSVPEIERWQQFCERTGEPLPAALH 134

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG NRLGLS  EA++            L+L++SHLACAD+P   +   QLE F+ +++
Sbjct: 135 VDTGMNRLGLSAAEAVNVAEGRDEL-GFPLALLMSHLACADEPGHPLTDRQLEDFQAIVA 193

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            +  + ASLA+S+G L  P+ HF L RPGI++YG   + + + P+Q VV  + RI+ IR+
Sbjct: 194 LFPDVRASLANSAGALGDPSLHFDLVRPGIAVYGARPRADVA-PLQPVVRLDLRIVQIRR 252

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE + YG      R+S +A+ + GYADG P   S      +  +  G +  + G+  
Sbjct: 253 VHEGETIGYGAAHTAKRESRVAILSAGYADGIPRLAS------ASDLRPGAEAVVGGHRC 306

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P++G+I+MD+   DITD     +  GD+  + G  + L+D+A  S T +Y++L  +G RY
Sbjct: 307 PLIGRISMDLLAVDITDVDEDAVAAGDFATLLGDGLALEDLARHSATIDYEILTSLGRRY 366

Query: 366 AKF 368
            + 
Sbjct: 367 HRR 369


>gi|261320388|ref|ZP_05959585.1| alanine racemase [Brucella ceti M644/93/1]
 gi|261293078|gb|EEX96574.1| alanine racemase [Brucella ceti M644/93/1]
          Length = 396

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 194/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP   L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQLLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|254712683|ref|ZP_05174494.1| Alr, alanine racemase [Brucella ceti M644/93/1]
 gi|254715753|ref|ZP_05177564.1| Alr, alanine racemase [Brucella ceti M13/05/1]
 gi|261217513|ref|ZP_05931794.1| alanine racemase [Brucella ceti M13/05/1]
 gi|260922602|gb|EEX89170.1| alanine racemase [Brucella ceti M13/05/1]
          Length = 399

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 194/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP   L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQLLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|298489912|ref|YP_003720089.1| alanine racemase ['Nostoc azollae' 0708]
 gi|298231830|gb|ADI62966.1| alanine racemase ['Nostoc azollae' 0708]
          Length = 395

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/381 (29%), Positives = 170/381 (44%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL  N   +   LS   +  AVVK +AYG G   +A  +  AG     V
Sbjct: 23  SQRAWVEIDLGALSYNVKQLVIFLSSRTQLMAVVKADAYGHGSVTVAKTVLEAGASCLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSC--- 118
            +V EG++LR    +A I +L   H   Q   I    L P + S  Q    S  +     
Sbjct: 83  ATVPEGIQLREGGIKAPILILGATHTLEQIHAIAQWKLQPTLCSPKQALEVSNTLEAINY 142

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG + QEA DF           ++ + SHLA AD P   +   Q
Sbjct: 143 NSPIPVHIKLDTGMSRLGTNWQEAGDFVQLVQGLPHLDIASVYSHLATADSPDPAIMQQQ 202

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
             RF   I+  K          LA+S+  L  P  H+ + R G+++YG      +     
Sbjct: 203 HNRFEQAIAQIKARGIKIPSLHLANSAATLADPKLHYDMVRAGLAIYGLYPATHLENKIK 262

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q V+  +AR+  ++   AG  VSYG Q    R+  IAV  IGYADG P +LS       
Sbjct: 263 LQPVLQLKARVTHVKTIAAGTGVSYGHQFIAPREMRIAVVGIGYADGVPRSLSNQM---- 318

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  ++G  V  +G ITMD  M D++    ++ G+ + + G      I  DD A
Sbjct: 319 -------QVLLRGQRVHQIGTITMDQIMLDVSSIPDLQEGEIVTLLGEQGQEQISADDWA 371

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T ++++L     R  + 
Sbjct: 372 NQLNTISWEILCAFKHRLPRV 392


>gi|226946802|ref|YP_002801875.1| alanine racemase [Azotobacter vinelandii DJ]
 gi|226721729|gb|ACO80900.1| alanine racemase [Azotobacter vinelandii DJ]
          Length = 361

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 105/371 (28%), Positives = 166/371 (44%), Gaps = 23/371 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L G AR  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLAALRHNYRLAREL-GGARALAVVKADAYGHGAVRCARALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     A I +L G     E      + +  +   P      +  +       
Sbjct: 60  IEEALELREAGIAAPILLLEGFFESAELEPIQRHDLWCVVHSPWQLEAIERTALTRPLTC 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G +  +                 + +SH A AD+      + QL +F T
Sbjct: 120 WLKLDSGMHRVGFAPADYRAAHARLMASGKVARIVAMSHFARADELDCPRVAEQLAQFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYH-----FQLTRPGISLYGGTDKI---NKSHPMQTVV 236
             +     E SL +S  +L  P +       +  RPGI LYG T       ++  ++ V+
Sbjct: 180 ATAGLVA-EFSLRNSPALLGWPQFFRHGHGDEWLRPGIMLYGATPFERYQEQAAQLRPVM 238

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+RII +R+  AGE V YG +   +R + + V A+GYADGYP                
Sbjct: 239 TLESRIIGVRELPAGEPVGYGARFVASRPTRVGVVAMGYADGYPRHAPN----------- 287

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G    ++G+++MDM   D+TD     +G  ++++G  +   +VA A+GT  Y 
Sbjct: 288 GTPVAVDGRPAQLIGRVSMDMLTVDLTDLPQAGLGSRVELWGAQVPASEVAAAAGTIAYQ 347

Query: 357 LLVRIGTRYAK 367
           L   +  R A+
Sbjct: 348 LFCNV-RRVAR 357


>gi|118616650|ref|YP_904982.1| alanine racemase [Mycobacterium ulcerans Agy99]
 gi|166969420|sp|A0PME2|ALR_MYCUA RecName: Full=Alanine racemase
 gi|118568760|gb|ABL03511.1| alanine racemase, Alr [Mycobacterium ulcerans Agy99]
          Length = 388

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 163/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+ +N   +   +G+A+  AVVK + YG G   +A     AG  +  V SV
Sbjct: 13  LAEAVVDLGAIAHNVRLLRERAGSAQVMAVVKADGYGHGATAVARTALAAGAVELGVASV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   ISS+ Q           G +   
Sbjct: 73  DEALTLRADGITAPVLAWLHAPGMDFGPALAADVQIAISSIRQLDEALDAARRTGTTATV 132

Query: 125 ALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            +++DTG NR G++     E +     +  +   +L  +++H+  AD P   +N +Q +R
Sbjct: 133 TVKIDTGLNRNGVAPALYPEMVTRLRQAVAEDAIRLRGLMTHMVHADAPEKPINDIQSQR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F+ ++ H +        A L++SS  +  P+    L RPGI++YG +         +   
Sbjct: 193 FKQMLDHARDQGVRFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSPVPRLGDMGLVPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG       D+ +A+  IGYADG   +L G          
Sbjct: 253 MTVKCAVALVKSVSAGEGVSYGHTWIAPHDTNVALLPIGYADGVFRSLGGRL-------- 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G++ MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 305 ---EVLINGKRRPGVGRVCMDQFLVDLGPGPLDVAEGDEAILFGPGTRGEPTAQDWADLV 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 362 GTIHYEVVTSPRGRITRVY 380


>gi|319407017|emb|CBI80654.1| Alanine racemase [Bartonella sp. 1-1C]
          Length = 373

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 119/365 (32%), Positives = 192/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID+ A+  N+ ++         +AVVK +AYGLG EKIAPALY AG + FF+  ++E 
Sbjct: 19  ATIDIGAIVANYKTLVQRVAPIECSAVVKADAYGLGAEKIAPALYQAGCRTFFIAHLKEA 78

Query: 69  VKLRLYTPQARIFV-LYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           ++L+   P     + L GI P  E+ +  T ++PV++S  ++  +       G   P  +
Sbjct: 79  LQLKAILPNNVTLILLNGIPPTAEEFVTQTGIVPVLNSRNEIENWQMHCQKNGKKFPAII 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E      N    ++  +  IISHLA  D+ +   N  Q    +T +
Sbjct: 139 QIDTNMNRLGLDQEELQWLIQNPSLFEIADIKYIISHLANGDNATHASNCEQKNAMKTAL 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +ASLA+S GI LGP+++F L RPGI LYG          ++ V+  +A++I  R
Sbjct: 199 AQLPTCKASLANSGGIFLGPDFYFDLVRPGIGLYGIDPHQQHPTSLKPVLKLKAQVIQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG     + S++   +IGYADG+   LS             G  +   + 
Sbjct: 259 CTEAGSPVGYGGSFITQKPSILTTISIGYADGWLRNLSN-----------KGFVYFNQHK 307

Query: 307 VPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+I+MD  + D T+      + GD++++ G    +++VA  +GT  Y++L  +G+R
Sbjct: 308 LPIIGQISMDSIIVDATNLQHEKPKRGDWVELIGKHQTIENVAADAGTIPYEILTSLGSR 367

Query: 365 YAKFY 369
           Y + Y
Sbjct: 368 YKRIY 372


>gi|229167180|ref|ZP_04294921.1| Alanine racemase [Bacillus cereus AH621]
 gi|228616218|gb|EEK73302.1| Alanine racemase [Bacillus cereus AH621]
          Length = 398

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSN--EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+ N      +++DL AL+ N+               VVK NAYG G   IA A+  AG 
Sbjct: 1   MNVNYGRHTIIEVDLNALQRNFQQYKQAIPFGTAIMTVVKANAYGHGAVPIAKAVTEAGT 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V  V+EG++LR       I +               +L   + ++  L    ++  
Sbjct: 61  SHLAVAFVDEGIELREAGITVPILIFGYTPYEAIVDAITYDLSMTVYTIEDLHAIEEVAS 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
               +    +++DTG +RLGL L E   F       K  Q+  + +H ACAD+       
Sbjct: 121 QMEKNAYIHIKIDTGMSRLGLQLNEVTLFLQTLKCTKYIQVEGMYTHFACADERDKMYTL 180

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
           +Q E F+  +S  + +          +S+  +        + R GI+LYG     +   +
Sbjct: 181 MQQEVFQKAVSKAEELQIVIPWIHANNSAATIDMRETKGNMVRLGIALYGLYPSADVNQE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  +Q ++  ++++  I+K   G  V YG     T +  IA   +GYADG    LS    
Sbjct: 241 AISLQPILIFKSKVAHIKKVKKGNGVGYGATYTATGEEWIATIPVGYADGVSRQLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   IKG  VPI+G+I MD  M D+T  + I VGD +  +G      I +D
Sbjct: 298 --------KGFVLIKGMKVPIIGRICMDQLMLDVTKIMPIHVGDEVVFYGNQGEESISVD 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            VA    T NY++   +  R  + Y
Sbjct: 350 CVADILSTINYEITCMLSRRIPRIY 374


>gi|159029814|emb|CAO90868.1| alr [Microcystis aeruginosa PCC 7806]
          Length = 378

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 109/377 (28%), Positives = 178/377 (47%), Gaps = 25/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              ++ID +AL+ N   + AL +      AV+K +AYG G  K+A ++  AG Q   + +
Sbjct: 8   RAWVEIDRSALQQNVRKVKALLAPKTELMAVIKADAYGHGAVKVANSVLEAGAQSLAIAT 67

Query: 65  VEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
           + EG++LR     A I +L     P +   +    L P +  + Q+  + + +       
Sbjct: 68  IGEGIELREAGIVAPIMILGAVNTPEEVAALAHWQLQPTLVQIEQVRIFAAVMRRLEQRL 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  +++DTG +RLG        F          +++ I SH A ADDP+  +  +Q +RF
Sbjct: 128 PVHIKLDTGMSRLGTPWHNGTKFVEQVLEAPNLKIASIYSHFATADDPNPEIMQLQRQRF 187

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTV 235
           +  I+      Y      LA+S+  L   + H+   R G++LYG      +    P+Q V
Sbjct: 188 QQAIAELKSKGYHPPCLHLANSAATLSDRSLHYDRVRVGLALYGLYPADHLTDKVPLQPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +ARI  ++   AG  VSYG Q    +D+ IAV  IGYADG P  LS           
Sbjct: 248 LQVKARIAQVKTIAAGSGVSYGHQYIAAKDTRIAVVGIGYADGIPRNLSNRL-------- 299

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              K  ++G +VP +G ITMD  M D+++   ++ G+ + + G D    I  DD A   G
Sbjct: 300 ---KVSLRGRLVPQIGAITMDQLMIDVSEIPEVKTGEIVTLIGKDGLQCITADDWARDLG 356

Query: 352 TTNYDLLVRIGTRYAKF 368
           T ++++L     R  + 
Sbjct: 357 TISWEILCGFKHRLPRI 373


>gi|163760547|ref|ZP_02167628.1| putative alanine racemase protein [Hoeflea phototrophica DFL-43]
 gi|162282162|gb|EDQ32452.1| putative alanine racemase protein [Hoeflea phototrophica DFL-43]
          Length = 374

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 160/366 (43%), Positives = 216/366 (59%), Gaps = 9/366 (2%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R+ +DLTAL  NW S+  LSG+AR  A VK + YG+G  + A  L   G +DFFV    
Sbjct: 15  TRMSVDLTALAANWLSLRELSGSARCGAAVKADGYGIGAIEAASRLAREGCRDFFVADAN 74

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG  LR + P  RI VL G+       I   +L+PVI+S  Q    +          YAL
Sbjct: 75  EGASLRPHLPDVRIHVLNGVFEDSFAQILAHDLVPVINSTEQ---AAFWTGTADGRAYAL 131

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            +DTG NRLGL+ ++A               +L++SH ACAD+P   +N+ Q+E F  L 
Sbjct: 132 HIDTGMNRLGLTPEQAAA----YAQSDAPPPALLMSHFACADEPGHPLNARQIEMFEALK 187

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + +  IEASLA+S+GI LG   H  LTRPGISLYGG    + +  M+ VVTAE R++ IR
Sbjct: 188 ACFPSIEASLANSAGIHLGKPAHHDLTRPGISLYGGNPVADANPKMRPVVTAETRVLQIR 247

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +A AG+ VSYG    L+RDS IAV  IGYADG+    SG       +   G  G I G  
Sbjct: 248 QARAGQPVSYGAAHFLSRDSRIAVCGIGYADGFLRAGSGAGVPLRSAAPKGAFGAINGKR 307

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP++GKITMD+TMFD+TD    E+  G +I++FGP I L++ A A+GT +Y++L  +G R
Sbjct: 308 VPVIGKITMDLTMFDVTDLGEDEIGAGSWIELFGPTISLEEAAQAAGTISYEMLTSLGRR 367

Query: 365 YAKFYT 370
           +A+ YT
Sbjct: 368 HARRYT 373


>gi|162455533|ref|YP_001617900.1| hypothetical protein sce7251 [Sorangium cellulosum 'So ce 56']
 gi|226711060|sp|A9ESU7|ALR_SORC5 RecName: Full=Alanine racemase
 gi|161166115|emb|CAN97420.1| alr [Sorangium cellulosum 'So ce 56']
          Length = 379

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 171/386 (44%), Gaps = 32/386 (8%)

Query: 5   EFLRLKIDLTALKNNWHSM-NALSGNAR--TAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
              R +++L  L++N   +   L+G  +     V+K +AYG G   +A  L  AG+    
Sbjct: 2   RPTRAEVNLAHLRHNLRVLERGLTGATKPQIWGVLKADAYGHGAPAVARTLERAGIPGLC 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHP---GQEKIIFDTNLIPVISSVPQLTFYS--KLM 116
           V  +EE ++LR    +  I V+ G +       + I   +L+PV+    Q+   +    +
Sbjct: 62  VALLEEAIELRDAGIRLPILVMGGYYGPRRDGFEEIIARDLVPVVYDAGQIERLASVVRL 121

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                    L+VDTG  RLG +  E              +L  +++HLACAD     V  
Sbjct: 122 EQRGRVGVHLKVDTGMGRLGAASSEIEAVLATLAKHPEVKLDGLMTHLACADADDLGVTI 181

Query: 177 VQLERF--RTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+  F      +   G+   +    +S+ +L  P     + RPG++L+G +     +  
Sbjct: 182 EQMRLFGEIEQRAKSFGLTPRVRHASNSAAMLRLPAALLDIVRPGVALFGISPCAGLAPD 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+   + I+ +R    G+ + YG   + +R+S++A   +GYADG    LS       
Sbjct: 242 LKPVIRVRSEIVALRTIAKGDRIGYGHTWQASRESVVATVPMGYADGLSRQLSNR----- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--------IKL 343
                 G   ++G   PI G ++MD+TM D+TD     +GD +   G          I  
Sbjct: 297 ------GAALVRGQRAPIAGAVSMDLTMLDVTDVPGARLGDEVVFLGTQDGPLGRGTISA 350

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +++A  +GT  +++L  I  R  +FY
Sbjct: 351 EEIAGLTGTIAWEVLTSISRRVPRFY 376


>gi|313203022|ref|YP_004041679.1| alanine racemase [Paludibacter propionicigenes WB4]
 gi|312442338|gb|ADQ78694.1| alanine racemase [Paludibacter propionicigenes WB4]
          Length = 819

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 157/372 (42%), Gaps = 23/372 (6%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L AL +N +     L    +   +VK  AYG G  ++A  L +       V   
Sbjct: 459 TTLEVNLNALIDNLNYFRAKLRPETKIMCMVKAFAYGSGAVEVARTLQHHRCDYLAVAVA 518

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--GVSHP 123
           +EG +LR    +  I V+     G   +IFD  L P I S   L  +           +P
Sbjct: 519 DEGAELRREGIRIPIVVMNP-EKGSFGMIFDNKLEPEIYSFRLLDAFIASAEKLGLTDYP 577

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERF 182
             +++D+G +RLG   +   +      N+   ++  + SHL+ +D+         Q++ F
Sbjct: 578 IHIKIDSGMHRLGFEPKNMEELLTRLKNQNQVKVRSVFSHLSGSDEAKFDSFTKQQIDTF 637

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                         I   + +S+GI     Y F + R GI  YG +   +        + 
Sbjct: 638 TDCADQLSGAFSHNIMRHILNSAGIERFSEYQFDMVRLGIGHYGISSLPDVKLKQVCAL- 696

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +  I+ I+   AGE V Y  +  +  D  IA+  IGYADG+   L             G
Sbjct: 697 -KTIILQIKTVKAGETVGYSRKGIVNEDKRIAIIPIGYADGFDRKLGNG----------G 745

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
           G+  + G    ++G + MD+ M D+T+      GD ++IFG ++ + +VA    T  Y++
Sbjct: 746 GEVLVNGKRAKVIGNVCMDLVMIDVTNV-EANEGDSVEIFGDNLTISEVAGWLKTIPYEV 804

Query: 358 LVRIGTRYAKFY 369
           L  +  R  + Y
Sbjct: 805 LTSVSRRVKRVY 816


>gi|166367623|ref|YP_001659896.1| alanine racemase [Microcystis aeruginosa NIES-843]
 gi|166089996|dbj|BAG04704.1| alanine racemase [Microcystis aeruginosa NIES-843]
          Length = 397

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 110/377 (29%), Positives = 179/377 (47%), Gaps = 25/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              ++ID +AL+ N   + AL +      AV+K +AYG G  K+A ++  AG Q   + +
Sbjct: 27  RAWVEIDRSALQQNVRKVKALLAPKTELIAVIKADAYGHGAVKVANSVLEAGAQSLAIAT 86

Query: 65  VEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSH 122
           + EG++LR     A I +L     P +   +    L P +  + Q+  ++  +       
Sbjct: 87  IGEGIELREAGIVAPIMILGAVNTPEEVAALAHWQLQPTLVQIEQVQIFASVMRRLEQRL 146

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  +++DTG +RLG   Q    F          +++ I SH A ADDP+  +  +Q +RF
Sbjct: 147 PVHIKLDTGMSRLGTQWQNGTKFVEQVLEAPNLKIASIYSHFATADDPNPEIMQLQRQRF 206

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTV 235
           +  I+      Y      LA+S+  L   + H+   R G++LYG      +    P+Q V
Sbjct: 207 QQAIAELRSKGYHPPCLHLANSAATLSDRSLHYDRVRVGLALYGLYPADHLTDKVPLQPV 266

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +ARI  ++   AG  VSYG Q    +D+ IAV  IGYADG P  LS           
Sbjct: 267 LQVKARIAQVKTIAAGSGVSYGHQYIAAKDTRIAVVGIGYADGIPRNLSNRL-------- 318

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              K  ++G +VP +G ITMD  M D+++   ++ G+ + + G D    I  DD A   G
Sbjct: 319 ---KVSLRGRLVPQIGAITMDQLMIDVSEIPEVKTGEIVTLIGKDGPQCITADDWARDLG 375

Query: 352 TTNYDLLVRIGTRYAKF 368
           T ++++L     R  + 
Sbjct: 376 TISWEILCGFKHRLPRI 392


>gi|145641722|ref|ZP_01797298.1| alanine racemase [Haemophilus influenzae R3021]
 gi|145273536|gb|EDK13406.1| alanine racemase [Haemophilus influenzae 22.4-21]
          Length = 360

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  
Sbjct: 4   KPATAKISSHALKKNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSLIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           +     +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SATKDKQG-ERTIAASGGILFWPESHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP            +V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYP-----------SNVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|307328078|ref|ZP_07607259.1| alanine racemase [Streptomyces violaceusniger Tu 4113]
 gi|306886383|gb|EFN17388.1| alanine racemase [Streptomyces violaceusniger Tu 4113]
          Length = 384

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 96/385 (24%), Positives = 153/385 (39%), Gaps = 29/385 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +    R  +DL AL+ N  ++   +  A   AVVK +AYG G    A A   AG     
Sbjct: 3   ETPMRARAVVDLAALRANVRALRDAAPTAELMAVVKADAYGHGMIPCARAARKAGASWLG 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGV 120
             + EE + LR      R+        G  +   + ++    S +       +   +CG 
Sbjct: 63  AATPEEALGLRAAGDTGRLMCWLWTPGGPWRQAIEADIDVSASGLWALREAVAAARACGR 122

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSV 177
           +    L+ DTG  R G    +       +   +      +    SH ACAD+P       
Sbjct: 123 TARLHLKADTGLGRSGCQPADWPALVDEARAAEAEGAIRVTGLWSHFACADEPGHPSIGA 182

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----K 228
           QL  FR +++H +          LA+S   L  P  HF L R GI+ YG +         
Sbjct: 183 QLSVFREMVAHAEQAGLRPEVRHLANSPATLTVPESHFDLVRTGIATYGISPSPELGTAA 242

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V+T  A +  +++   G  VSYG +     ++ +A+  +GY DG P   SG   
Sbjct: 243 DFGLRPVMTLSAALASVKRVPGGHGVSYGHRYVTPGETTLALVPVGYGDGIPRHASGT-- 300

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                    G   + G    I G + MD  + D+    +   GD   +FGP    +   +
Sbjct: 301 ---------GPVLVAGKWRTIAGTVAMDQFVVDLGGD-TAAPGDEAVLFGPGDRGEPTAE 350

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D A A G+  Y+++ RI  R  + Y
Sbjct: 351 DWARAVGSIAYEIVTRISARIPRVY 375


>gi|298374323|ref|ZP_06984281.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 3_1_19]
 gi|301307851|ref|ZP_07213807.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 20_3]
 gi|298268691|gb|EFI10346.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 3_1_19]
 gi|300834194|gb|EFK64808.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 20_3]
          Length = 821

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 150/369 (40%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N++     L    +   +VK   YG G  ++A  L         V   +E
Sbjct: 463 LEVNLDAIVHNFNQYRSKLKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           G +LR       I V+         +  +     V S         +    G++ +P  +
Sbjct: 523 GAELRKEGISIPIIVMNPEFSSFNVLFENHLEPEVYSFRLLDAMIRETERRGITSYPIHI 582

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++          +       + SHLA +D          QL++F   
Sbjct: 583 KIDTGMHRLGFQPEDVPAICERLRAQSGVIARSVFSHLAGSDSYVFDDFTHQQLDKFTKA 642

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                      +   + +S+GI     Y   + R GI LYG +    K     +  T + 
Sbjct: 643 AGELENGLEYKVIKHILNSAGIERFAAYQMDMVRLGIGLYGVSASGQKGLRNVS--TLKT 700

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AG+ + Y     + RDS IA+  IGYADG     S            GG+ 
Sbjct: 701 TILQIQNVPAGDSIGYSRMSYVKRDSRIAIIPIGYADGLDRHFSNG----------GGEV 750

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G   PI+G I MD  M D+TD    + GD + IFG ++ + +++    T  Y++L  
Sbjct: 751 LINGQRCPIIGNICMDACMIDVTDIH-AQEGDAVIIFGDELPVSELSDKLKTIPYEILTS 809

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 810 ISPRVKRVY 818


>gi|150009966|ref|YP_001304709.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Parabacteroides distasonis ATCC
           8503]
 gi|255012771|ref|ZP_05284897.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides sp. 2_1_7]
 gi|149938390|gb|ABR45087.1| alanine racemase [Parabacteroides distasonis ATCC 8503]
          Length = 821

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 150/369 (40%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N++     L    +   +VK   YG G  ++A  L         V   +E
Sbjct: 463 LEVNLDAIVHNFNQYRSKLKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           G +LR       I V+         +  +     V S         +    G++ +P  +
Sbjct: 523 GAELRKEGISIPIIVMNPEFSSFNVLFENHLEPEVYSFRLLDAMIRETERRGITSYPIHI 582

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++          +       + SHLA +D          QL++F   
Sbjct: 583 KIDTGMHRLGFQPEDVPAICERLRAQSGVIARSVFSHLAGSDSYVFDDFTHQQLDKFTKA 642

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                      +   + +S+GI     Y   + R GI LYG +    K     +  T + 
Sbjct: 643 AGELESGLEYKVIKHILNSAGIERFAAYQMDMVRLGIGLYGVSASGQKGLRNVS--TLKT 700

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AG+ + Y     + RDS IA+  IGYADG     S            GG+ 
Sbjct: 701 TILQIQNVPAGDSIGYSRMSYVKRDSRIAIIPIGYADGLDRHFSNG----------GGEV 750

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G   PI+G I MD  M D+TD    + GD + IFG ++ + +++    T  Y++L  
Sbjct: 751 LINGQRCPIIGNICMDACMIDVTDIH-AQEGDAVIIFGDELPVSELSDKLKTIPYEILTS 809

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 810 ISPRVKRVY 818


>gi|148557977|ref|YP_001257844.1| alanine racemase [Brucella ovis ATCC 25840]
 gi|166919547|sp|A5VVI9|ALR_BRUO2 RecName: Full=Alanine racemase
 gi|148369262|gb|ABQ62134.1| alanine racemase [Brucella ovis ATCC 25840]
          Length = 396

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 194/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+   AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLPLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|154502763|ref|ZP_02039823.1| hypothetical protein RUMGNA_00577 [Ruminococcus gnavus ATCC 29149]
 gi|153796646|gb|EDN79066.1| hypothetical protein RUMGNA_00577 [Ruminococcus gnavus ATCC 29149]
          Length = 383

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 90/385 (23%), Positives = 161/385 (41%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M  +  +  +IDL A+  N   M    G  A+  AVVK + YG G   IA  L +   V 
Sbjct: 2   MEKHSRVYAEIDLDAISYNMEQMKKRVGEGAKFIAVVKTDGYGHGAVPIACMLDDDPDVW 61

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
            +   ++EE V+L     Q    VL  + P Q + +    +   + ++       +    
Sbjct: 62  GYATATLEEAVELHRAGIQKPTMVLGCVFPDQYEEMIKEEVRATVYTLDMAHEISNLARK 121

Query: 118 CGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +  + +++DTG  RLG    +E+ D            L  + +H A AD+     + 
Sbjct: 122 LGKTAYFHIKIDTGMERLGFPATEESADLIGQIEKLPNVCLEGMFTHFAKADELDKTFSE 181

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q  +F  + +  +       +    +S+GI+  P +   L R GI+LYG         +
Sbjct: 182 EQYRKFVWMRNEVEKRGISISQYHCDNSAGIIDFPQWKQNLVRAGIALYGLYPSEEVKKE 241

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++  +   + +  +++   G  +SYGG     +   +A   +GY DGY   LS    
Sbjct: 242 TVDLKPALRLVSHVSFVKEVEPGASISYGGTFTADKKMKVATIPVGYGDGYARGLSNR-- 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G+  I+G    ILG++ MD  M D+TD       D + + G     +I ++
Sbjct: 300 ---------GEVLIRGKRARILGRVCMDQFMVDVTDIPDTVFMDEVVLIGRDGDDEITVE 350

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +++   G  NY+ +  +G R  + Y
Sbjct: 351 ELSEICGRFNYEFVCCLGKRIPRVY 375


>gi|256419281|ref|YP_003119934.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Chitinophaga pinensis DSM 2588]
 gi|256034189|gb|ACU57733.1| alanine racemase [Chitinophaga pinensis DSM 2588]
          Length = 834

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 161/369 (43%), Gaps = 18/369 (4%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L+A+ +N     +L     +  A+VK  +YG G  +IA  L   GV    V   +E
Sbjct: 473 LEINLSAVTHNVKQYQSLLKPGTKLMAMVKAFSYGSGSFEIANLLQFHGVDYLAVAYADE 532

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           GV LR       I V+       + I+       + S      F  ++   G +  P  +
Sbjct: 533 GVDLRRTGITMPIMVMNPEPSSFDAILQWNLEPEIYSLHLLKQFEEEVQLAGKTGFPVHI 592

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++  +      +    +++ + SHLA ++DP        Q + F  +
Sbjct: 593 KLDTGMHRLGFEKKDIPELARLLSDNIYLKVNSVFSHLAASEDPAMDAFTKQQGQLFFEM 652

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
               +      +   +A+S+ I   P+    + R GI +YG          ++   T + 
Sbjct: 653 SHELQKALGYTVIRHIANSAAIERHPDLQLDMVRLGIGMYGIDSANKIQDQLRPASTLKT 712

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  ++    G+ V YG +      S+ A   IGYADGYP  LS             GK 
Sbjct: 713 TVAQVKHLSTGDTVGYGAKWVAKGPSVTATVRIGYADGYPRRLSNG----------KGKM 762

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            ++G + P+ G + MDM M D+T+   +  GD + +FG ++ +  V+  + T  Y++L  
Sbjct: 763 LVRGQLAPVAGVVAMDMLMLDVTNIPEVAEGDEVIVFGNELPVQQVSAWADTIPYEILTG 822

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 823 ISQRVKRVY 831


>gi|163845038|ref|YP_001622693.1| alanine racemase [Brucella suis ATCC 23445]
 gi|189027530|sp|A9WVT5|ALR_BRUSI RecName: Full=Alanine racemase
 gi|163675761|gb|ABY39871.1| alanine racemase [Brucella suis ATCC 23445]
          Length = 396

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG +       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTQAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|260599554|ref|YP_003212125.1| alanine racemase [Cronobacter turicensis z3032]
 gi|260218731|emb|CBA34079.1| Alanine racemase, biosynthetic [Cronobacter turicensis z3032]
          Length = 371

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 102/373 (27%), Positives = 168/373 (45%), Gaps = 19/373 (5%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            S +   + ++  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F 
Sbjct: 11  KSMQAATVVVNRRALRHNLQRLRELAPASQLVAVVKANAYGHGLLETARTLPD--ADAFG 68

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V  +EE ++LR       I +L G     +        +       +     +  +    
Sbjct: 69  VARLEEALRLREGGITQPILLLEGFFNADDLPAIAAQRLHTAVHSEEQLAALEQATLSEP 128

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               +++DTG +RLG+  + A  F +  +  K + Q   ++SH A AD+P       QL+
Sbjct: 129 VTVWMKLDTGMHRLGVRPEAAQAFYNRLAACKNVRQPVNVVSHFARADEPDCGATERQLD 188

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVV 236
            F +      G + S+A+S GIL  P  HF   RPGI LYG +             Q  +
Sbjct: 189 IFNSFTHDKPG-KRSIAASGGILFWPQSHFDWIRPGIILYGVSPLDTHPWGAELGFQPAM 247

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + +I +R   AGE V YGG     RD+ + V A+GY DGYP                
Sbjct: 248 SLISSLIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPR-----------CAPT 296

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +G + Y+
Sbjct: 297 GTPVLVNGREVPIVGRVAMDMICVDLGPDAPEKAGDTVVMWGEALPVERIAEVTGVSAYE 356

Query: 357 LLVRIGTRYAKFY 369
           L+ R+ +R A  Y
Sbjct: 357 LVTRLTSRVAMRY 369


>gi|182436579|ref|YP_001824298.1| putative alanine racemase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178465095|dbj|BAG19615.1| putative alanine racemase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 392

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 162/381 (42%), Gaps = 29/381 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N   +   +  A+  AVVK + YG G    A A   AG       + 
Sbjct: 8   RARAEIDLAALRANVRVLRERAAGAQLMAVVKSDGYGHGAVPCARAAREAGATWLGTATP 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR      RI        G  +   + ++   +  +       +   + G +   
Sbjct: 68  QEALALRAAGLDGRIMCWLWTPGGPWREAIEADIDVSVGGMWALREVVAAAAAAGRTARI 127

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G    +  +    +   +      +    SH ACAD+P     + QL  
Sbjct: 128 QLKADTGLGRGGCQPADWPELVGEALAAERAGRVEVTGLWSHFACADEPGHPSIAAQLAV 187

Query: 182 FRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           +R L+  +  +G+E     LA+S   L  P  HF L R GI++YG +            +
Sbjct: 188 YRDLVAYAEKEGVEPEVRHLANSPATLTIPEAHFDLVRTGIAMYGVSPAPELGTSADLGL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A + L++ A AG  +SYG     T ++ + +  +GYADG P   SG       
Sbjct: 248 RPVMTLAASVALVKDAPAGHGISYGHHYTTTAETTLGLIPVGYADGVPRHASGT------ 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   + G +  + G++ MD  + D+ D    E G    +FGP    +    D A 
Sbjct: 302 -----GPVLVGGKVRRVAGRVAMDQFVVDL-DGDRPEAGAEAVLFGPGDRGEPTAQDWAE 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           A+GT  Y+++ RIGTR  + Y
Sbjct: 356 AAGTIAYEIVTRIGTRVPRVY 376


>gi|256015684|ref|YP_003105693.1| alanine racemase [Brucella microti CCM 4915]
 gi|255998344|gb|ACU50031.1| alanine racemase [Brucella microti CCM 4915]
          Length = 396

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 194/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+L G   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALCGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|119471275|ref|ZP_01613778.1| alanine racemase 1, PLP-binding, biosynthetic [Alteromonadales
           bacterium TW-7]
 gi|119445741|gb|EAW27024.1| alanine racemase 1, PLP-binding, biosynthetic [Alteromonadales
           bacterium TW-7]
          Length = 359

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 173/370 (46%), Gaps = 19/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I+LTAL +N   +   + N++  AV+K NAYG G  KIA  L +     F V  
Sbjct: 2   RLATAEINLTALAHNLAQVKRFAPNSKVMAVLKANAYGHGLVKIAQHLND--ADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR       I +L G     +  I   N    I          +          
Sbjct: 60  IDEALALRAGGLTKPIVLLEGFFNKDDLPILLANNFQTIIHDEYQLAALEEAELEAPLLC 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERFR 183
            L+V+TG +RLG++ ++  +F               +++H ACADD ++   + Q+ +F 
Sbjct: 120 WLKVNTGMHRLGIAPEQFDEFYKRLQKTPNANNTVNLMTHFACADDVNNTKTAQQISQFD 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
            L+++       L++S+GI+  PN H    RPG+ LYG +   N   + H ++ V+    
Sbjct: 180 CLVNNINQAH-CLSNSAGIIAWPNAHGDWVRPGLMLYGVSPMANALGEQHQLKPVMRLTT 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I +R   A E V YGG+ K  + + +AV A+GY DGYP                G   
Sbjct: 239 RVIAVRHVPANEAVGYGGRWKSDKATQLAVVAMGYGDGYPRHAK-----------EGTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            I      I+G + MDM   DI  +  +I+VGD + ++GP++ ++++A  + T  Y+LL 
Sbjct: 288 VIGKQRYGIVGSVAMDMISVDIGQNEHNIKVGDRVTMWGPELPVEEIAQCADTIPYELLC 347

Query: 360 RIGTRYAKFY 369
            I  R +  Y
Sbjct: 348 NITPRVSYEY 357


>gi|312199983|ref|YP_004020044.1| alanine racemase [Frankia sp. EuI1c]
 gi|311231319|gb|ADP84174.1| alanine racemase [Frankia sp. EuI1c]
          Length = 388

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 155/376 (41%), Gaps = 29/376 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL A++ +   + A +G+A T AVVK + YG G    A A  +AG     V  +EE + 
Sbjct: 22  IDLDAVRASTAELVARAGSAATMAVVKADGYGHGMLPCARAALDAGATWLGVAVIEEALA 81

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHPYALQVD 129
           LR       +                  +    S+        +   S G      L+ D
Sbjct: 82  LRAAGITVPVMSWLMSPGEPLDAAIGAQIDLSASAPWALAEIAAAARSTGRPARVHLKAD 141

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLERFRT-- 184
           TG  R G +  +       +   +      +  + SH A AD P       Q+ RF    
Sbjct: 142 TGLGRAGATDADWPGLCDAAAALRAEGVLDVVGVWSHFAFADAPGHPTVQGQIGRFTDAV 201

Query: 185 LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
            I+   G+      LA+S+  L+ P  HF L RPGIS+YG +   +        ++  + 
Sbjct: 202 EIAEKAGLRPEVRHLANSAATLVSPEAHFDLVRPGISIYGLSPGPDVGRSAELGLRPAMR 261

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             AR+ L ++   G  VSY  +     ++ +A+  +GYADG P   + L           
Sbjct: 262 LAARVALAKRVPPGTGVSYAHRYVTDSETTLALVPLGYADGVPRAATNL----------- 310

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
           G+  + G    I G + MD  + D+ D   +  GD   +FGP    +   DD A A GT 
Sbjct: 311 GEVLLAGRRRRIAGTVCMDQFVLDVGDD-QVAEGDEAVLFGPGDAGEPTADDWAAALGTI 369

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++ RIG R  + Y
Sbjct: 370 NYEIVTRIGPRVPRIY 385


>gi|262382727|ref|ZP_06075864.1| alanine racemase [Bacteroides sp. 2_1_33B]
 gi|262295605|gb|EEY83536.1| alanine racemase [Bacteroides sp. 2_1_33B]
          Length = 821

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 149/369 (40%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N++     L    +   +VK   YG G  ++A  L         V   +E
Sbjct: 463 LEVNLDAIVHNFNQYRSKLKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           G +LR       I V+         +  +     V S         +    G++ +P  +
Sbjct: 523 GAELRKEGISIPIIVMNPEFSSFNVLFENHLEPEVYSFRLLDAMIRETERRGITSYPIHI 582

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++          +       + SHLA +D          QL++F   
Sbjct: 583 KIDTGMHRLGFQPEDVPAICERLRAQSGVIARSVFSHLAGSDSYVFDDFTHQQLDKFTKA 642

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                      +   + +S+GI     Y   + R GI LYG +    K     +  T + 
Sbjct: 643 AGELENGLEYKVIKHILNSAGIERFAAYQMDMVRLGIGLYGVSASGQKGLRNVS--TLKT 700

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AG  + Y     + RDS IA+  IGYADG     S            GG+ 
Sbjct: 701 TILQIQNVPAGNSIGYSRMSYVKRDSRIAIIPIGYADGLDRHFSNG----------GGEV 750

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G   PI+G I MD  M D+TD    + GD + IFG ++ + +++    T  Y++L  
Sbjct: 751 LINGQRCPIIGNICMDACMIDVTDIH-AQEGDAVIIFGDELPVSELSDKLKTIPYEILTS 809

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 810 ISPRVKRVY 818


>gi|37523387|ref|NP_926764.1| alanine racemase [Gloeobacter violaceus PCC 7421]
 gi|35214391|dbj|BAC91759.1| alanine racemase [Gloeobacter violaceus PCC 7421]
          Length = 381

 Score =  285 bits (729), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 115/377 (30%), Positives = 172/377 (45%), Gaps = 26/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++IDL AL++N   +   L  + R  AVVK +AYG G      A   AG     V 
Sbjct: 8   RRAWVEIDLDALRHNVQQIRQRLRSHCRVMAVVKADAYGHGALSAGRAALEAGAACLGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSH 122
           ++EEG +LR       I VL  IH G E    +     P + +  Q+   ++ +S    H
Sbjct: 68  TLEEGAQLRESGLGCPIVVLGPIHTGAEVAAVEHWRLEPTLCTPRQVLVCAEHLSA--PH 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  L++DTG  RLG   Q+A++F   ++     Q++ + SHLA AD+P S     Q  RF
Sbjct: 126 PVHLKIDTGMTRLGAPWQDAVEFVRLAYRLPRLQVASVYSHLATADEPDSAALGEQHRRF 185

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTV 235
             ++     +  +     LA+S+  L  P  H+ L R G++LYG         +  ++ V
Sbjct: 186 ERVLGELEAAGVRPECVHLANSAAALGDPGLHYDLVRVGVALYGLYPAPEFYGAAELRPV 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   AR+  +R+  A   VSYG   +    S +A  AIGYADG P  LSG          
Sbjct: 246 MQVRARVTQVREVPADTGVSYGHFWRTPTPSRLATVAIGYADGVPRRLSGQL-------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  + G   P +G ITMD  + D T   ++E GD + + G D    I   D A   G
Sbjct: 298 ---QVLVHGRRAPQVGAITMDQIVIDCTHLSAVEEGDVVTLLGRDGNEAIGAADWADPLG 354

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++L     R  + 
Sbjct: 355 TIAYEILCGFKHRLPRV 371


>gi|254473465|ref|ZP_05086862.1| alanine racemase [Pseudovibrio sp. JE062]
 gi|211957581|gb|EEA92784.1| alanine racemase [Pseudovibrio sp. JE062]
          Length = 383

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 137/367 (37%), Positives = 208/367 (56%), Gaps = 9/367 (2%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +L IDLTAL++NW  +N   G+  T AVV K N YG G  ++   LY+AG + FFV   
Sbjct: 20  AKLTIDLTALRSNWCYLNGKVGDGCTCAVVLKANGYGTGAAEVGKTLYHAGARVFFVALP 79

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EEG++LR   P A I+VL G+   +EK  +D +L PV++S+ ++  +S          P 
Sbjct: 80  EEGIELRKELPHAEIYVLNGLFRHREKFYYDFDLKPVLNSLEEVAEWSSFAQSLQEELPA 139

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           AL  DTG +RLG+S+ +AL    ++   K  ++ L++SHLACAD P   +N  QL RF+ 
Sbjct: 140 ALHFDTGMHRLGMSIGDALQIGESAHLLKSIRIDLVMSHLACADTPDHGLNEKQLNRFQR 199

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +   +     SL++S+GI LG +YHF + RPGI+LYGG    ++++PM  V   +A II 
Sbjct: 200 VCELFPEARKSLSNSAGIFLGDDYHFDMVRPGIALYGGNPVPDETNPMLPVAHVQAEIIS 259

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+   G+ V YG  +   R S IA    GYADG    +   D +       G + +I G
Sbjct: 260 LREVPHGDPVGYGASRVTPRKSRIATINAGYADGLHRLVGSSDDQ-----PNGARVYIGG 314

Query: 305 YMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           +  PI G+++MDM   D+TD     +  G  ++I G  + +D++A  + T  Y+LL  +G
Sbjct: 315 HFAPIFGRVSMDMIAVDVTDIPEEHLSRGAPVEIMGAHVNVDELAEFAQTIPYELLCSLG 374

Query: 363 TRYAKFY 369
            RY + Y
Sbjct: 375 ARYTRHY 381


>gi|183981139|ref|YP_001849430.1| alanine racemase, Alr [Mycobacterium marinum M]
 gi|183174465|gb|ACC39575.1| alanine racemase, Alr [Mycobacterium marinum M]
          Length = 388

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 162/379 (42%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+ +N   +   +G+A+  AVVK + YG G   +A     AG  +  V SV
Sbjct: 13  LAEAVVDLGAIAHNVRLLRERAGSAQVMAVVKADGYGHGATAVARTALAAGAVELGVASV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   ISS+ Q           G +   
Sbjct: 73  DEALTLRADGITAPVLAWLHAPGMDFGPALAADVQIAISSIRQLDEVLDAARRTGTTATV 132

Query: 125 ALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            +++DTG NR G++     E +     +  +   +L  +++H+  AD P   +N +Q +R
Sbjct: 133 TVKIDTGLNRNGVAPALYPEMVTRLRQAVAEDAIRLRGLMTHMVHADAPEKPINDIQSQR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F+ +  H +        A L++SS  +  P+    L RPGI++YG +         +   
Sbjct: 193 FKQMFDHARDQGVRFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSPVPRLGDMGLVPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG       D+ +A+  IGYADG   +L G          
Sbjct: 253 MTVKCAVALVKSVSAGEGVSYGHTWIAPHDTNVALLPIGYADGVFRSLGGRL-------- 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G++ MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 305 ---EVLINGKRRPGVGRVCMDQFLVDLGPGPLDVAEGDEAILFGPGTRGEPTAQDWADLV 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 362 GTIHYEVVTSPRGRITRVY 380


>gi|282895986|ref|ZP_06304017.1| Alanine racemase region protein [Raphidiopsis brookii D9]
 gi|281199096|gb|EFA73966.1| Alanine racemase region protein [Raphidiopsis brookii D9]
          Length = 385

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 106/381 (27%), Positives = 173/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL NN   +   LS   +  AVVK +AYG G   +A  +  AG     V
Sbjct: 12  SQRAWVEIDLGALSNNVKQLVGFLSPGTQLMAVVKADAYGHGAITVATTVLAAGATWLGV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMS---C 118
            +V EG++LR    +A I +L   + P Q   I    L P + S  Q   +S+ ++    
Sbjct: 72  ATVTEGIQLREAGIKAPILILGATYTPEQIHAITSWQLEPTLCSPGQALIFSQFLNSIDH 131

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG   Q+A  F           ++ + SH A AD P + +   Q
Sbjct: 132 NYKLPVHIKLDTGMSRLGAEWQQAGQFAQFVQELPRLHIASVYSHFATADSPDTTIMEQQ 191

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             RF+  I+  +          LA+S+  L     H+ + R G+++YG     ++ + +Q
Sbjct: 192 HGRFQQAIAQIRARGIKIPSLHLANSAATLGDKELHYDMVRAGLAIYGLYPAAHQRNYLQ 251

Query: 234 --TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               +  +ARI  I+    G  VSYG +    R+  I V  IGYADG P  LS       
Sbjct: 252 LRPALQVKARITHIKTISKGTGVSYGHKFIAPREMRIGVVGIGYADGVPRGLSNQM---- 307

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  ++G+ V  +G ITMD  M DI+  + ++ G+ + + G      I  DD A
Sbjct: 308 -------EVLVQGHRVQQIGMITMDQLMIDISPLVEVQEGEIVTLLGEQGEEKITADDWA 360

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T +++++     R  + 
Sbjct: 361 NQLNTISWEIICGFKHRLPRV 381


>gi|257054529|ref|YP_003132361.1| alanine racemase [Saccharomonospora viridis DSM 43017]
 gi|256584401|gb|ACU95534.1| alanine racemase [Saccharomonospora viridis DSM 43017]
          Length = 378

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 26/374 (6%)

Query: 1   MHSNEFLRLKI--DLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M      R ++  DL A+++N   +   A +  A T AVVK + YG G   +A A   AG
Sbjct: 1   MSGMSLPRAEVVVDLEAIRHNVRLLASRAAASGAETMAVVKADGYGHGAVPVARAAVEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKL 115
                V S++E + LR      R+               + ++   +SS  +        
Sbjct: 61  ATWLGVASLDEALALRNAGLTTRLMSWLDTPDVDFAPAVERDIDVSVSSTGELARAVDAA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
              G      L++DTG +R G   +        +  +   ++  + SHLACAD+P     
Sbjct: 121 ARVGRRARVHLKIDTGLSRNGCPAELWPTLVKAAAAEDGVEVVGMWSHLACADEPGHPAT 180

Query: 176 SVQLERFRTLISHYKGIE----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
             Q ERF    +  +         LA+S+  L  P+ HF L RPGI++YG    +++   
Sbjct: 181 EAQAERFAAAYAVAREAGLSPLRHLANSAATLTRPDLHFDLVRPGIAVYGLNP-VSQPED 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +T  + ++L ++  AGE VSYG     + D+ +A+  +GYADG P TLSG  S   
Sbjct: 240 LRPAMTFRSSVVLTKRIRAGESVSYGQTWTASADTTVALVPVGYADGVPRTLSGRLS--- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                    ++ G   P++G++ MD  + D  D    E+G  + +FG          + A
Sbjct: 297 --------VWLNGTRRPVVGRVCMDQLVVDCGDDEP-ELGAEVVLFGTGEGGMPTATEWA 347

Query: 348 LASGTTNYDLLVRI 361
              GT +Y+++  +
Sbjct: 348 EKIGTIDYEIVTGM 361


>gi|332994605|gb|AEF04660.1| alanine racemase [Alteromonas sp. SN2]
          Length = 355

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 15/365 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  I   A+ +N+  +  L+  +R+ AVVK +AYG G   ++  L +     F V 
Sbjct: 2   SRQTQAIIHADAILSNFKLLAELAPTSRSMAVVKADAYGHGAVNVSRILQHVS-PRFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + LR     A I VL G H  +E  +  ++   ++        +           
Sbjct: 61  IIEEAIALREAGITAPIVVLEGAHQAKECAMAASHGCILVMHNQAQLEWMLACPEDRRPT 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+ D+G +RLG  L           +        +++HLACADD S+     QL  F 
Sbjct: 121 IWLKADSGMHRLGFVLNTLPSIVKQYASLITQDTV-LVTHLACADDTSNDFTQKQLSAFL 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
             I+    +  S+A+S   +  P       R GI++YGG      +  +   +T  + II
Sbjct: 180 Q-IATQLALPVSIANSPATIEWPQSRGDWNRLGIAVYGGQPNT-ANVALAPTMTLRSSII 237

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R    GE V YG      +DS IA   IGYADGYP                G    + 
Sbjct: 238 ALRDVPKGESVGYGQNWVAQKDSRIATVGIGYADGYPRHCPN-----------GTPVAVN 286

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    + G+++MDM   D+T   ++ +GD ++++G ++ +++VA A+ + +Y+LL R+  
Sbjct: 287 GERAGLAGRVSMDMITIDVTHISNVNIGDRVELWGENVPINEVAEAADSIDYELLTRVSA 346

Query: 364 RYAKF 368
           R  + 
Sbjct: 347 RVPRI 351


>gi|148360608|ref|YP_001251815.1| hypothetical protein LPC_2554 [Legionella pneumophila str. Corby]
 gi|226711052|sp|A5IGG9|ALR_LEGPC RecName: Full=Alanine racemase
 gi|148282381|gb|ABQ56469.1| hypothetical protein LPC_2554 [Legionella pneumophila str. Corby]
          Length = 357

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 172/366 (46%), Gaps = 17/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +  L+   +  A+VK NAYG G  ++AP L +  ++ F V 
Sbjct: 2   SRPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVL-DGRIEAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + +R    +    +  G+    E  +   N    +    Q   +           
Sbjct: 61  CLEEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAQQLEWLIKTPLPYPIK 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             ++V+TG +RLG  + E             + +   +++HLACAD+P    N  Q+  F
Sbjct: 121 VWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKSIGLMTHLACADEPHRPENQQQISLF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
           +  IS     + S+A+S+ I+  P+    + RPGI LYG +   N+      +  V+   
Sbjct: 181 QE-ISIPGFRQRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNAHDLGLIPVMRFM 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  I    +   V YGG  K  + S I V A GY DGYP  +S               
Sbjct: 240 SAISAIHDNPSFAQVGYGGTWKSDKPSRIGVVAAGYGDGYPRHIS-----------EKTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +++G  V I+G+++MDM   D+T+   +E+GD ++++G  + ++ +A ++GT  Y+LL 
Sbjct: 289 VWVRGREVSIVGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTVGYELLC 348

Query: 360 RIGTRY 365
           +I  R 
Sbjct: 349 QISERV 354


>gi|315125720|ref|YP_004067723.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           sp. SM9913]
 gi|315014234|gb|ADT67572.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           sp. SM9913]
          Length = 359

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 170/370 (45%), Gaps = 19/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I+L AL +N   +   + N++  AV+K NAYG G  KIA  L +     F V  
Sbjct: 2   RLAIAEINLQALAHNLAQVRQFAPNSKVMAVLKANAYGHGLVKIAQHLND--ADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR       I +L G     +  I   N    I          +          
Sbjct: 60  IDEALALRAGGLTKPIVLLEGFFHQDDLPILLANNFQTIIHDENQLRALENAKLDAPISC 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L+++TG +RLG++  +  DF               +++H + ADD +    + Q+  F 
Sbjct: 120 WLKINTGMHRLGVAPTQLNDFYQRLQATDNAKDTINLMTHFSSADDVNDPKTAEQIALFD 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
           +L+   +     LA+S+GI+  P  H +  RPG+ +YG +  +N   K H ++ V+    
Sbjct: 180 SLVQGKQQAH-CLANSAGIIAWPAGHGEWVRPGLMMYGVSPMLNTSGKDHQLKPVMRLTT 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I IR   A + V YGG  +  + + +AV A+GY DGYP                G   
Sbjct: 239 KVIAIRDVDAAQGVGYGGSWQSAQPTKLAVVAMGYGDGYPRHAK-----------HGTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            I G    I G I+MDM   DI ++   I+VGD + ++GP++ ++++A  + T +Y+LL 
Sbjct: 288 VIAGKRYGIAGNISMDMISVDIGENADGIKVGDEVVMWGPELPVEEIAQCADTISYELLC 347

Query: 360 RIGTRYAKFY 369
            I  R +  Y
Sbjct: 348 NITPRVSYEY 357


>gi|295136431|ref|YP_003587107.1| alanine racemase [Zunongwangia profunda SM-A87]
 gi|294984446|gb|ADF54911.1| alanine racemase [Zunongwangia profunda SM-A87]
          Length = 368

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 107/376 (28%), Positives = 159/376 (42%), Gaps = 21/376 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M   +   L+IDL +L++N+  + +      +  AVVK  AYG     IA  L  AG+  
Sbjct: 1   MPKAQETVLEIDLKSLEHNYQYLRSKVEPTVKMMAVVKAFAYGSDSVTIAAKLEKAGIDH 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V   +EG  LR    +  + VL+   P    ++ D  L P + S   LT + K     
Sbjct: 61  FAVAYTKEGETLRAGGIEKPVLVLHP-QPHNLTLLIDNCLTPSLYSKHILTEFIKTAEAL 119

Query: 119 -GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
               +P  + ++TG NRLG  L+E         N    +L  I SHLA ++D        
Sbjct: 120 KLKEYPVHININTGLNRLGFGLEEIDQVITLFKNTLAVRLVGIYSHLAASEDLAEKEFTQ 179

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+E F+        +    I   L ++SGIL  P   F + R GI LYG  +   +   
Sbjct: 180 GQIETFKKASGKILKAFDHKIMRHLCNTSGILNYPEATFDMVRTGIGLYGYGNSAQEDKK 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V T +  I  I    A E V Y       RD+  A   IG+ADG             
Sbjct: 240 LKPVGTLKTIISQIHNIKAEESVGYNRAFIAKRDTTTATLPIGHADGISRIYG------- 292

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                     I     PI+G + MDM M D+T     + GD + IFG +   + +A  +G
Sbjct: 293 ---KQKTAVLINDKEAPIIGNVCMDMIMVDVTGI-ECKEGDQVIIFGKERSAEKLANNAG 348

Query: 352 TTNYDLLVRIGTRYAK 367
           T +Y+L+  I  R  +
Sbjct: 349 TISYELITSISQRVKR 364


>gi|146340278|ref|YP_001205326.1| putative alanine racemase (alr) [Bradyrhizobium sp. ORS278]
 gi|146193084|emb|CAL77095.1| putative alanine racemase (alr) [Bradyrhizobium sp. ORS278]
          Length = 393

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 182/365 (49%), Gaps = 11/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  A  A V+K +AYG G  ++A  L  AG + FFV ++ E 
Sbjct: 27  LTIDLDALAANWRKLEKTAVPAECAGVIKADAYGCGIPQVARTLAAAGCKTFFVATLGEA 86

Query: 69  VKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
              R   P+ A ++VL G            N  PVI  + +L  +       G     A+
Sbjct: 87  KIARSALPEPAALYVLDGFFQNTGDDYAAINCRPVIGDLNELAEWDMFCRRTGWKGGAAI 146

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG NRLGL+  +A              ++L++SHLA A+  +S  N+ QL  FR + 
Sbjct: 147 HVDTGMNRLGLTPIDAQGMI-PRIQSGDHGITLVMSHLASAEQVNSPANARQLATFREVA 205

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           S + G+ A+LA+SSGI LG ++HF + RPG +LYG        +PMQ V   +ARI+ +R
Sbjct: 206 SVFTGVPAALAASSGIFLGASFHFDMVRPGAALYGVNPTPEADNPMQPVAEIKARIVQLR 265

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V YGG     R + IA+ + GYADGY    S  D         G    + G  
Sbjct: 266 DLARGDAVGYGGTWTARRPTKIAILSAGYADGYFRAASSNDGTR------GADVIVAGQR 319

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            P+ G+++MD+   D+TD        G +  + G  I +D++A   GT  Y++L  +G R
Sbjct: 320 CPVAGRVSMDLIAVDVTDLPPKAARRGHFATLLGEGISVDELAHHFGTIGYEVLTNLGRR 379

Query: 365 YAKFY 369
           Y + Y
Sbjct: 380 YHRIY 384


>gi|261367671|ref|ZP_05980554.1| alanine racemase [Subdoligranulum variabile DSM 15176]
 gi|282570464|gb|EFB75999.1| alanine racemase [Subdoligranulum variabile DSM 15176]
          Length = 395

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 25/378 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +IDL AL++N+  +    G     AVVK +AYG G   +A  L   G   F V+ + E
Sbjct: 11  WAEIDLDALRHNFAFIKRTIGGP-VCAVVKADAYGHGDIVVARVLQEEGAAAFAVSCLAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIF-DTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
             +LR +     + +L    P +   +  +       S+       +  ++ GV     L
Sbjct: 70  AKRLRRHGITVPVLILGYADPSEASALAQEDIATACFSTEYAKALSAAAVAAGVQVKVHL 129

Query: 127 QVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADD---PSSHVNSVQL 179
           ++DTG  R+G       Q  +       +     +  I  H A AD     +      Q 
Sbjct: 130 KIDTGMGRIGFAAQSDWQAVVRELEALCSLPGLSICGIFQHFAVADSLEPDAQTYTDNQY 189

Query: 180 ERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-Q 233
             FR ++   +           A+S+  L  P +   +TR GI LYG         P+ +
Sbjct: 190 TLFRKVVDQLQADGYDTGTVHCANSAAQLRHPEWRNDMTRAGIILYGLDPSDELHFPVLK 249

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T +  +  ++  L G+ VSYG          +A A +GYADGYP  LSG   +    
Sbjct: 250 PVMTLKCIVTFVKDLLPGQSVSYGRTFTAKAPMRVATACVGYADGYPRMLSGSQGQ---- 305

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--KLDDVALASG 351
               G   + G   P+LG++ MD T+ D+T+   + +GD + +FGP      D +A  + 
Sbjct: 306 ----GLMMVNGRPAPVLGRVCMDQTLLDVTNIPGVRMGDEVTVFGPGAPDTADTIARKTD 361

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+++  I  R  + Y
Sbjct: 362 TISYEIVCGIARRVPRVY 379


>gi|15837454|ref|NP_298142.1| alanine racemase [Xylella fastidiosa 9a5c]
 gi|9105760|gb|AAF83662.1|AE003925_2 alanine racemase [Xylella fastidiosa 9a5c]
          Length = 365

 Score =  285 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 19/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S       IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F
Sbjct: 1   MCSVRPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR    QA I +L G    +E  +   + +  + +               
Sbjct: 59  AVACIEEALELRQAGIQAPILLLEGFFEAEELELIAKHNLWTVIASSWQVRALAAFHSPS 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++D+G +RLGL  +E  D   +          ++++HLA AD+  +   + Q  
Sbjct: 119 PIGVWLKLDSGMHRLGLEPKEFRDAWMSLHRLPQVGEIVLMTHLARADELDNPRTNEQAS 178

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVV 236
            F           AS+ +SSG+L     +    RPG+ LYG      +S     P++ V+
Sbjct: 179 VFAQASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPIPQESTSLSGPLRPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
              +R+I + +  AGE V YG      R + + V A+GYADGYP                
Sbjct: 238 MVYSRLIAVHELPAGEPVGYGACFVTERPTRVGVVAMGYADGYPYFAVN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y 
Sbjct: 287 GTPLLVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQ 346

Query: 357 LLVRIGTRYAKFY 369
           LL  +  R  ++Y
Sbjct: 347 LLCGL-KRVRRYY 358


>gi|220906119|ref|YP_002481430.1| alanine racemase [Cyanothece sp. PCC 7425]
 gi|219862730|gb|ACL43069.1| alanine racemase [Cyanothece sp. PCC 7425]
          Length = 387

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/391 (27%), Positives = 169/391 (43%), Gaps = 40/391 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E   +++DL AL  N   +  L S +    AVVK +AYG G   +A  +   G     V 
Sbjct: 8   ERAWVEVDLAALGENTRRIKGLLSPSTELMAVVKADAYGHGAVMVARKVLQQGASSLGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++ EG++LR     A I V   ++   + + I    L   +SS  Q   +S+ +      
Sbjct: 68  TIAEGIELRQAGIDAPILVFGAVNTLAEVQAIAQWQLQATLSSPKQALIFSRHLEH--PC 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  L +DTG  RLG   +++L+     +      L+ + SHLA AD         Q  +F
Sbjct: 126 PVHLVIDTGMGRLGCPQEQSLELIKFVYGLPHLTLAGLCSHLAMADAIDPSCMEQQRCQF 185

Query: 183 RTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTV 235
             ++   +          LA+S+  L  P +H+ L R G++LYG     +    +  Q V
Sbjct: 186 EQVVQQVRCAGIPLPPLHLANSAATLRSPQFHYNLVRVGLALYGLYPAPHLRSRVELQPV 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   ARI L++   AG  VSYG Q    +   IAV  IGYADG P  LS   S       
Sbjct: 246 LQVRARITLVKTIAAGSGVSYGHQFVAPQPMRIAVVGIGYADGVPRNLSNRMS------- 298

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--------------- 340
                 ++G  V  +G ITMD  + D+T   +++ GD + + G D               
Sbjct: 299 ----VLLRGQRVAQIGVITMDQLIIDVTGVENVQEGDVVTLIGEDGEDPGATPSRSGQPQ 354

Query: 341 ---IKLDDVALASGTTNYDLLVRIGTRYAKF 368
              I +++ A   GT ++++L     R  + 
Sbjct: 355 VERITVEEWAHTLGTISWEILCNFKQRLPRI 385


>gi|332140005|ref|YP_004425743.1| alanine racemase [Alteromonas macleodii str. 'Deep ecotype']
 gi|254802359|sp|B4S1A6|ALR_ALTMD RecName: Full=Alanine racemase
 gi|327550027|gb|AEA96745.1| alanine racemase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 358

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 18/368 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  I   AL +N+ ++ A++ ++++ AVVK +AYG G   +A  L +     F V 
Sbjct: 2   SRQTQAIIHADALLHNFKALAAIAPSSQSMAVVKADAYGHGAVNVARILQHVS-SQFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +EE + LR     A + VL G     + ++ F  N I V+    QL + +        H
Sbjct: 61  IIEEAIALRDAGISAPVVVLEGAHQAKECQMAFQHNCILVMHCEEQLQWLNNCPENQRPH 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VD+G +RLG ++ +  D T    +  L + ++I +H ACADD  +   + QL  F
Sbjct: 121 -IWLKVDSGMHRLGFAISDIEDMTKKYRHL-LSEQTVIATHFACADDVDNGFTASQLSAF 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQTVVTAEA 240
           +  ++   G+  S+A+S   +  P       R G+ +YGG      +    +   +T  +
Sbjct: 179 KR-VADAIGLPTSVANSPATVNWPASRNAWNRLGVGVYGGAVSTANNVGVEIYPAMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ +R   AGE V YG +   ++ S IA   IGYADGYP                    
Sbjct: 238 SILAVRTIAAGEGVGYGQRWVASKPSKIATVGIGYADGYPRHCKN-----------KTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            ++G    + G+++MDM   D+T   ++ VGD ++++G ++ + +VA  + T +Y+L+ R
Sbjct: 287 MVRGKRAFLAGRVSMDMITIDVTHIDNVSVGDEVELWGQNVPIQEVAACADTIDYELMTR 346

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 347 VSQRVPRI 354


>gi|212638046|ref|YP_002314566.1| D-alanine racemase [Anoxybacillus flavithermus WK1]
 gi|226711025|sp|B7GFP5|ALR_ANOFW RecName: Full=Alanine racemase
 gi|212559526|gb|ACJ32581.1| D-alanine racemase [Anoxybacillus flavithermus WK1]
          Length = 385

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/377 (24%), Positives = 144/377 (38%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A+  N  SM    G +    AVVK NAYG G  ++A     AG     V  +
Sbjct: 9   TWAEIDLDAIFYNVQSMKQHVGSHVEVIAVVKANAYGHGDIQVAKTALEAGATRLAVAFL 68

Query: 66  EEGVKLRLYTP--QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +E + LR         I VL    P    +    N+   +                    
Sbjct: 69  DEALALRKKGISLDVPILVLGATKPQYAPLAASQNIALTVFRADWFEQAIVYAPYEQPLN 128

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++DTG  RLG    +E     +         L  + +H A AD+ +    S Q + F
Sbjct: 129 VHMKLDTGMGRLGAKTKEEVQQMIYAIEQHPSFILEGVYTHFATADEQNIDYFSFQYDTF 188

Query: 183 RTLISH--YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVV 236
             ++     +      A+S+  L  P+  F   R GIS+YG            +P++   
Sbjct: 189 LHMLEWLSIQPPLIHCANSAAGLRYPDRIFNAVRFGISMYGLAPSQEMKSLLPYPLKEAF 248

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  +R+  ++K   GE +SYG   +   D  I    IGYADG+   +             
Sbjct: 249 SLHSRLTHVKKVKGGEKISYGATYEAETDEWIGTVPIGYADGWLRRMQHFS--------- 299

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                + G   PI+G++ MD  M  +     + VG  + + G      I +DDVA    T
Sbjct: 300 ---VLVDGKRAPIVGRVCMDQMMIRLP--YELPVGTKVTLIGEQQGDRISVDDVAAHVNT 354

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++   I  R  + +
Sbjct: 355 INYEIPCTISYRVPRIF 371


>gi|168184689|ref|ZP_02619353.1| alanine racemase [Clostridium botulinum Bf]
 gi|237795085|ref|YP_002862637.1| alanine racemase [Clostridium botulinum Ba4 str. 657]
 gi|182672221|gb|EDT84182.1| alanine racemase [Clostridium botulinum Bf]
 gi|229263448|gb|ACQ54481.1| alanine racemase [Clostridium botulinum Ba4 str. 657]
          Length = 389

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 162/384 (42%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKKKVNCKEIFAVVKANGYGHGALDIASTLLENGATRHS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  + E ++LR       I +L    P   + I + N+ PV+ S       SK  S    
Sbjct: 63  VACLSEAIELREGGITCPINILGITPPTLFEDIINYNIEPVVFSYDYANQLSKAASLKNR 122

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG     E+L+      N    ++  + SH + +D+     +  Q 
Sbjct: 123 IVKTHIAVDTGMGRLGFDPTVESLEEIKRIQNLSNIKIEGLCSHFSSSDEKDKSYSEYQF 182

Query: 180 ERF----RTLISHYKGIEASLA-SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           + F    + LI     I      +S+ I+  P+ +    R GI LYG         ++  
Sbjct: 183 KIFQNFRKKLIEMNMKIPIHHMSNSAAIIDLPSTYLDAVRAGIILYGYYPSREVNKENLH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G+ V Y  + K  R S IA+  +GY DGY   LS       
Sbjct: 243 IKQVMTLKANIVHIKTIDSGKYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD + I G D         +D
Sbjct: 298 ------GKVIINGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGRDDINNLRYDAED 351

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G T+ +++  I  R  + Y
Sbjct: 352 IASKVGMTSGEIMSIISKRVPRVY 375


>gi|309777766|ref|ZP_07672714.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914450|gb|EFP60242.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 382

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/388 (25%), Positives = 167/388 (43%), Gaps = 31/388 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           SN    L+IDL+ + +N   +  L  +  +  A+VK N YG G  + A  +   G+  F 
Sbjct: 4   SNTRSWLEIDLSRISHNIKEVQKLLPSTSKIMAIVKANGYGHGDVECARVMEQQGIDFFG 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGV 120
           V+SV+EGV+LR +  Q+ I VL    P     + + +LI  + S+       +      +
Sbjct: 64  VSSVDEGVRLREHGIQSPILVLGYTPPVHFHYLHEASLIQTLVSLEYAQKLNAYGRKHDI 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA------CADDPSSHV 174
                 +VDTG +R+G+  QE      +           +    +      C D+ +   
Sbjct: 124 VIKAHAKVDTGMSRIGIVAQEHAYHIEDIKALYHMDHIAVCGIFSHFSVSDCLDEENCRF 183

Query: 175 NSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              Q+  F  +++  +          L +S GIL  PN  +   RPG+   G T      
Sbjct: 184 TDHQIALFDRVLADLRAAGIDPGTTHLQNSYGILNYPNLKYDYVRPGLLWMGVTSDDAVE 243

Query: 230 HP----MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  Q ++  +A + L+++   G  VSYG   K    + +A  A+GYADG+P ++S 
Sbjct: 244 IRTAPQFQPIMEWKANVSLVKEIQPGVTVSYGRHFKAKECTRVATLAVGYADGFPRSVSN 303

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----I 341
                      G    + G  VPI+G I MD  M DIT   +++ GD   + G D    +
Sbjct: 304 K----------GACVLLHGKRVPIIGNICMDQMMVDITGLDAVQEGDVATLIGSDGEETL 353

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +D+++  + T N + L  I  R  + Y
Sbjct: 354 PVDELSRLAKTINNETLCWISQRVPRIY 381


>gi|89889690|ref|ZP_01201201.1| alanine racemase [Flavobacteria bacterium BBFL7]
 gi|89517963|gb|EAS20619.1| alanine racemase [Flavobacteria bacterium BBFL7]
          Length = 367

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/372 (27%), Positives = 169/372 (45%), Gaps = 21/372 (5%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            RL+++L AL++N+H +   L    +  AVVK NAYG G   IA  L    V  F V  V
Sbjct: 6   TRLEVNLAALEHNFHYLKSKLQSGVKFMAVVKANAYGHGAVAIAHRLQELDVDYFAVAYV 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS--HP 123
            E V+LR    +  I VL+           +  + PVI S+  L  +  +        +P
Sbjct: 66  SEAVELRNNGIKKPILVLHA-QAFTLNTCIERCIEPVIYSIEMLDAFIAIAQDKQQSAYP 124

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERF 182
             L+ +TG NR+G+  ++  +      +    ++  + SHLA ++D +     + Q+E F
Sbjct: 125 IHLEFNTGLNRIGIDFKDIDEVISKVTSNSSIKVRGLQSHLAASEDLNELDFTNSQIELF 184

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           + + +              +++SGIL   + HF + R GI LYG  +       ++ V +
Sbjct: 185 KEINARLEKALPYPFLKHESNTSGILNYKDAHFSMVRSGIGLYGFGNDHTFDKQLKPVAS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ I   R   AGE VSY  +    + +  AV A+G+ DG                +  
Sbjct: 245 LKSVISQTRWIEAGESVSYNRKFIAQKRTQYAVIALGHGDGINRIYG----------YGK 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
            +  I G + P LG I MDM M DIT+     VGD + IF  +    ++A  +GT +Y++
Sbjct: 295 AQVSINGKLAPTLGIICMDMFMVDITNI-DCYVGDEVIIFNQEFTAREMAEKAGTISYEI 353

Query: 358 LVRIGTRYAKFY 369
           L  I  R  + Y
Sbjct: 354 LTGIQKRVPRIY 365


>gi|86159846|ref|YP_466631.1| alanine racemase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776357|gb|ABC83194.1| alanine racemase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 395

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 154/373 (41%), Gaps = 19/373 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL +N   + A +  AR  AVVK NAYG G      A   AG     V  
Sbjct: 14  RPVWAEIDLDALAHNVRLLAARASPARLYAVVKANAYGHGAVACGRAALEAGAHGLAVVC 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           V+E  +LR     A + V+          +    L P + ++  +   S      G   P
Sbjct: 74  VDEAEELRRAGLDAPLLVIGHTPASDAARVVALGLRPAVGAMDLVEALSAEAGRRGAEVP 133

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NR GL+    +     +      ++  + +H A A++        Q E  R
Sbjct: 134 IHLELESGLNRHGLTPDALVALAERARALPGLRVEGLFTHFAAAEEGDQRFTRAQFEVLR 193

Query: 184 TLISHYKGI-EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEA 240
                   + E   A+S+ ILL      +  R G+SLYG            ++ V++  A
Sbjct: 194 DTSRRLPWVPERHCAASASILLDHEMALEAVRGGLSLYGYRPAPWCGTDADLRPVMSLRA 253

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+  + +   G  V YG      R + +A+   GYADGY  +                + 
Sbjct: 254 RVARVSEIDRGATVGYGRTWAANRATRVALVMCGYADGYRRSFGNR-----------TQV 302

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            + G   P++G++ MDM M D+T    +  GD + + G D    +  DD+A  + T +++
Sbjct: 303 LVHGRRAPVVGRVAMDMCMVDVTAVPGVAAGDVVTLIGRDGDERVDADDLATIADTISWE 362

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 363 ILAGISARVPRLY 375


>gi|145627697|ref|ZP_01783498.1| alanine racemase [Haemophilus influenzae 22.1-21]
 gi|144979472|gb|EDJ89131.1| alanine racemase [Haemophilus influenzae 22.1-21]
          Length = 360

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 174/364 (47%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK N   +   + N++  AVVK NAYG G   +A  L  + V  F V  
Sbjct: 4   KPATAKISSHALKQNLEIIKQKAPNSKIIAVVKANAYGHGVVFVASTLEQS-VDCFGVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    Q+  I   N I  +    +     K  +       
Sbjct: 63  LEEALALRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLDALKRANLPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF 
Sbjct: 123 WLKIDTGMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
           ++    +G E ++A+S GIL  P+ H +  RPGI +YG +    I K   +  V+   + 
Sbjct: 183 SVTKDKQG-ERTIAASGGILFWPDSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V YGG     RD+ I V A+GY DGYP            +V  G   +
Sbjct: 242 LIAVRHHKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYP-----------SNVPEGTPIY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VPI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++
Sbjct: 291 LNGRLVPIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|296100680|ref|YP_003610826.1| alanine racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295055139|gb|ADF59877.1| alanine racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 359

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 165/368 (44%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFEAADLPTIADQHLHTAVHNEEQLSALETAELSEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  + A  F       K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEHAQAFYQRLCQCKNVRQPVNIVSHFARADEPDCGATEQQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G+  S+A+S GILL P  HF   RPGI LYG +             Q V++  ++
Sbjct: 182 CEGKPGMR-SIAASGGILLWPQSHFDWARPGIILYGVSPLENRPWGPDFGFQPVMSLVSK 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWTSARDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  V I+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVKIVGRVAMDMICVDLGPDAQDKAGDDVVMWGDGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|295104133|emb|CBL01677.1| alanine racemase [Faecalibacterium prausnitzii SL3/3]
          Length = 400

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 91/394 (23%), Positives = 157/394 (39%), Gaps = 35/394 (8%)

Query: 1   MHSNEF---LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M    F   +  +IDL AL+ N+  + A +G     AVVK ++YG G  + A      G 
Sbjct: 1   MQKQPFEKHVWAEIDLEALRYNFREVKARAGALPLCAVVKADSYGHGAVQCARVFAEEGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V+ + E V+LR       I +L  + P     +   ++     S+ Q    S+   
Sbjct: 61  AWLAVSCLTEAVQLRKAGQTLPILILGHVQPAYAAALIQNDITVACYSLAQARALSEAAV 120

Query: 117 SCGVSHPYALQVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
           + G      L+ DTG  R+G         A+     +      +++ +  H + ADD + 
Sbjct: 121 AAGGKVHIHLKADTGMGRIGFALRTDFDAAIREMLEACALPGLEMTGLFQHFSVADDTAP 180

Query: 173 H---VNSVQLERF-----RTLISHYKGIEASLASSSGILLGPNYH------FQLTRPGIS 218
                 + Q   F         +  +       +S+G++L P++         + RPGI 
Sbjct: 181 ENVAYTAEQHALFVKAFHALKAAGREPALVHCDNSAGVMLHPDWPEGLPRERCMARPGII 240

Query: 219 LYGGTDKINKSHPMQTV-VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           LYG               +T +  + +I++   G+  SYG +    + + +A    GYAD
Sbjct: 241 LYGYDPSDEVRFGRFKPVMTLKTVVSMIKEMQPGQCASYGRRFTAEKPTKVATLCTGYAD 300

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP  LS             G   I G   P+LG++ MD  M D+TD   +   D   ++
Sbjct: 301 GYPRLLS----------CGKGVVEIHGKACPVLGRVCMDQMMVDVTDVPEVREDDEAILW 350

Query: 338 GPDI--KLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G  +    + +A  + T  Y++L  +  R  + Y
Sbjct: 351 GGTVSDTAETIARKTDTIPYEVLCGVSRRVPRVY 384


>gi|311896524|dbj|BAJ28932.1| putative alanine racemase [Kitasatospora setae KM-6054]
          Length = 394

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 32/384 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL AL++N  ++ A +  A   AVVK +AYG G  + A     AG       + 
Sbjct: 17  RAEATVDLAALRDNLAALRARTSGAELMAVVKADAYGHGALRCAREAVAAGAGWLGTATP 76

Query: 66  EEGVKLRLYTP---QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVS 121
           EE + LR       QARI        G        ++   IS         + +   GV 
Sbjct: 77  EEALALRAAGIGPEQARILCWLWTPGGPWARALRESVDISISGQWALDELLAAVRETGVP 136

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQ 178
               L+ DTG  R G    +  D   N+   +   L ++  + SH A AD+P       Q
Sbjct: 137 ARVHLKADTGLGRNGCQPHDWPDLVENAVKAQAAGLLRVVGVWSHFAAADEPGHPSIQAQ 196

Query: 179 LERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
           L+ F   ++             LA+S   LL P  H+ L RPG+++YG +   +      
Sbjct: 197 LDSFAQALAFAERTGVDPEVRHLANSPATLLLPQSHYDLVRPGLAMYGLSPVPDVGAPAD 256

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++  AR+ L+++   G  +SYG     +  + + +  +GYADG P   S     
Sbjct: 257 FGLRPVMSLAARLALVKRVPGGHGISYGHHYTTSGPTTLGLVPLGYADGVPRHASNT--- 313

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G   I      + G++ MD  + D+   L  +VG+ + +FG     +   +D
Sbjct: 314 --------GPVQIGSSWYRVAGRVAMDQFVVDLGGDLP-DVGEEVLLFGSGERGEPTAED 364

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A A GT  Y+++ RIG R  + Y
Sbjct: 365 WARACGTIAYEIITRIGGRVPRRY 388


>gi|296106326|ref|YP_003618026.1| alanine racemase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648227|gb|ADG24074.1| alanine racemase [Legionella pneumophila 2300/99 Alcoy]
          Length = 357

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 17/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +  L+   +  A+VK NAYG G  ++AP L +  ++ F V 
Sbjct: 2   SRPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVL-DGRIEAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + +R    +    +  G+    E  +   N    I    Q   +           
Sbjct: 61  CLEEALAIRALGVETPCILFQGVFSSDELSVAVENDFACILHHAQQLEWLIKTPLPYPIK 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             ++V+TG +RLG  + E             + +   +++HLACAD+P    N  Q+  F
Sbjct: 121 IWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKNIGLMTHLACADEPHRPENQQQISLF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
           +  IS     + S+A+S+ I+  P+ H  + RPGI LYG +   N+      +  V+   
Sbjct: 181 QE-ISIPGFRQRSIANSAAIISFPDSHADVVRPGIMLYGVSPFANQNARDLSLIPVMRFM 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  I    +   V YGG  K  + S I + A GY DGYP  +S               
Sbjct: 240 SAISAIHDNPSFAQVGYGGTWKSDKPSRIGIVAAGYGDGYPRHIS-----------EKTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +++G  V I+G+++MDM   D+T+   +E+GD ++++G  + ++ +A ++GT  Y+LL 
Sbjct: 289 VWVRGREVSIVGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTVGYELLC 348

Query: 360 RIGTRY 365
           +I  R 
Sbjct: 349 QISERV 354


>gi|256262185|ref|ZP_05464717.1| alanine racemase [Brucella melitensis bv. 2 str. 63/9]
 gi|263091881|gb|EEZ16203.1| alanine racemase [Brucella melitensis bv. 2 str. 63/9]
 gi|326411074|gb|ADZ68138.1| Alr, alanine racemase [Brucella melitensis M28]
 gi|326554365|gb|ADZ89004.1| Alr, alanine racemase [Brucella melitensis M5-90]
          Length = 399

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 196/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVEMIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|225686682|ref|YP_002734654.1| alanine racemase [Brucella melitensis ATCC 23457]
 gi|225642787|gb|ACO02700.1| alanine racemase [Brucella melitensis ATCC 23457]
          Length = 396

 Score =  285 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 134/378 (35%), Positives = 196/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 18  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 77

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 78  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ QL +   L+
Sbjct: 138 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQLAKMTALL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 198 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS         
Sbjct: 258 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRSLSN-------- 309

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 310 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVEMIGPHQRLEDVARDCD 366

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 367 TIPYEILTALGNRYARVY 384


>gi|315649168|ref|ZP_07902258.1| alanine racemase [Paenibacillus vortex V453]
 gi|315275387|gb|EFU38745.1| alanine racemase [Paenibacillus vortex V453]
          Length = 395

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 89/384 (23%), Positives = 163/384 (42%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+L  L+ N++    AL  +    A VK NAYG G  ++A  L   G     V 
Sbjct: 6   RPTLAEINLDHLRANYNVFREALPKHMELLACVKANAYGHGAVEVARELQQLGAAYLSVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSH 122
            ++E ++LR       I VL    P   +  ++ +  I + SS       +  +      
Sbjct: 66  FLDEALELRQGGISIPILVLGYTPPEAVETAYEYDVTITLFSSEVLKAIKALPVKPEKPL 125

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++D+G  RLGL   ++AL F   + +     +  + +H A AD+ +      Q  R
Sbjct: 126 KVHIKIDSGMGRLGLLPGEDALTFIEEACSLPQVVVEGMFTHFARADEHNKDYTLEQYRR 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F+ +    +     +      +S+  +  P   + + R GISLYG         K+  ++
Sbjct: 186 FQGVADALRDKGYHIPIIHTGNSAAAIDTPELSYNMVRIGISLYGLYPSDEVNRKAVSLR 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T + +++ ++       +SYG +    ++  I    IGYADG+   LSG        
Sbjct: 246 PVMTLKTKLVYVKNLPPHSGISYGSKYVTEQEERIGTLPIGYADGFSRMLSG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGPD----IKLDD 345
                +  I+G   P++G I MD  M  +     ++  I+ G+ + + G      I  D+
Sbjct: 298 ---KAEVLIRGRRAPVVGNICMDQCMVSLKPFAEEAEQIKAGEEVVLIGQQSGECITADE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  I  R  + Y
Sbjct: 355 LAAKLGTIHYEVVCMIAHRVPRQY 378


>gi|332716082|ref|YP_004443548.1| Alanine racemase [Agrobacterium sp. H13-3]
 gi|325062767|gb|ADY66457.1| Alanine racemase [Agrobacterium sp. H13-3]
          Length = 388

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 206/365 (56%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++ A++  ++TAAVVK +AYGLG + ++  L++AG ++FFV  ++E 
Sbjct: 18  LTIDLGALRDNYLALAAMAPTSQTAAVVKADAYGLGADIVSQVLFDAGCRNFFVAHIDEA 77

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           + LR   + +ARIFVL G+ PG E       + PV++S+ Q+  ++      G + P A+
Sbjct: 78  LALRLRLSAEARIFVLNGLQPGNEASCAAMAVTPVLNSLEQIAQWAAHAKNLGKTLPAAV 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG  RLGLS +E               ++ ++SHLACAD+P    N+ QL   R   
Sbjct: 138 QIDTGMCRLGLSPEELEVLASRPQLLDDIDVAFVMSHLACADEPDHLSNAAQLSVMRKAA 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             +  +    ++S GI LG +YH  L RPGI+LYGG   + + +PM+ VV  +  +I  R
Sbjct: 198 VAFPDVSVCFSNSGGIFLGNDYHNSLLRPGIALYGGAPSVTRPNPMKPVVRLDVAVIQTR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG LV YGG  +    + +A  A GYADG P +LS             G  +  G  
Sbjct: 258 DVPAGSLVGYGGSFEAAGPTRLATIAAGYADGLPRSLSNR-----------GAAWYNGVR 306

Query: 307 VPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI G+++MD  + DI+     ++  G ++Q+ GPD  L+D+A  +GT  Y++L  +G R
Sbjct: 307 LPIAGRVSMDSIILDISALPLGTLTQGSFVQMIGPDQTLEDIAEDAGTIAYEILTGLGRR 366

Query: 365 YAKFY 369
           Y + Y
Sbjct: 367 YRRNY 371


>gi|226310085|ref|YP_002769979.1| alanine racemase [Brevibacillus brevis NBRC 100599]
 gi|226093033|dbj|BAH41475.1| alanine racemase [Brevibacillus brevis NBRC 100599]
          Length = 400

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/380 (23%), Positives = 152/380 (40%), Gaps = 29/380 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             +++DL A++ N  +            AVVK + YG G   +      +G     V  +
Sbjct: 8   TWVEVDLDAIRANLETFKRHLPEKTDIMAVVKADGYGHGAVHVGKEALASGADSLAVALL 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +E + LR     A I VL            +  +     SV  +T  + ++         
Sbjct: 68  DEALILRRAGITAPILVLGYTPVESIVTASELEVELTAYSVEWITEANDILQKNDHKPVG 127

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERF 182
             ++ DTG  RLG+  +E L     +  +    + + I +H ACAD+P +     Q + F
Sbjct: 128 IHVKTDTGMGRLGVRTKEDLLAVVGALEECSKLKWTGIFTHFACADEPDTTHVRRQHDLF 187

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           ++ +   +            +++  +  P++ +   R GI LYG    +        ++T
Sbjct: 188 QSFLQALREANKKLPTVHCCNTAAAIAFPDWGYDTIRLGIGLYGLYPSLYMKERADVILT 247

Query: 238 A----EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
                + RI  ++KA     VSYG       D  IA   IGYADGY   LS         
Sbjct: 248 PALALKTRIAHVKKADEPFTVSYGATHTAQPDEWIATLPIGYADGYSRLLSNR------- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
               G+    G   PI G++ MD  M  + +S    V D + ++G     +I LD++A  
Sbjct: 301 ----GEVLYNGTRYPIAGRVCMDQIMVSL-NSTEAAVNDEVVLYGKQGDEEISLDEIADL 355

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT NY++   +  R  + Y
Sbjct: 356 LGTINYEVPCMLNYRIPRLY 375


>gi|225026346|ref|ZP_03715538.1| hypothetical protein EUBHAL_00588 [Eubacterium hallii DSM 3353]
 gi|224956356|gb|EEG37565.1| hypothetical protein EUBHAL_00588 [Eubacterium hallii DSM 3353]
          Length = 390

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 164/375 (43%), Gaps = 27/375 (7%)

Query: 10  KIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +IDL A++ N+ ++   +G NA T AV+K + YG G  ++A  L +     F V +++EG
Sbjct: 26  EIDLKAIRENYINIKKKTGDNAMTMAVIKADGYGHGAVEVAHYLNDI-ADYFGVATIDEG 84

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHPYALQ 127
           V+LR    +  I +L    P       +  +   I             +    +    + 
Sbjct: 85  VELRKAGLKQPILLLGYNSPSLYYKNLEYGVDQTIYCYDTAKAMSEAAVKAEKTARIHIA 144

Query: 128 VDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +DTG  R+GLS  E  L            ++  + +HL+CAD         Q+ER+   +
Sbjct: 145 LDTGMTRIGLSPDEKGLAIVKQIAELPNIKIEGLFTHLSCADMTDKAYTESQMERYDHFV 204

Query: 187 S--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTA 238
                 GIE     + +S+ I+   ++ + + R GI LYG                 ++ 
Sbjct: 205 QLLDEAGIEIPVKHICNSAAIMEYEDHRYDMARAGIILYGMYPSDEVDFSNLDLTPAMSW 264

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + ++ I +      VSYG    +     +A  ++GYADGY  +LS             G
Sbjct: 265 YSHVVNIMEPEMERGVSYGATYIVEHPCRLATVSVGYADGYARSLSN-----------KG 313

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              I G   PI+G++ MD  M DITD   +++ D + + G D    I ++D+A  +G+ N
Sbjct: 314 WVLIHGQKAPIVGRVCMDQMMVDITDIPDVKLEDIVTLIGKDGDNYISVEDMANLAGSFN 373

Query: 355 YDLLVRIGTRYAKFY 369
           Y+ +  +G R  + Y
Sbjct: 374 YEFVCDVGKRVPRVY 388


>gi|54310410|ref|YP_131430.1| alanine racemase [Photobacterium profundum SS9]
 gi|123614432|sp|Q3V7I5|ALR_PHOPR RecName: Full=Alanine racemase
 gi|46914851|emb|CAG21628.1| putative alanine racemase, biosynthetic [Photobacterium profundum
           SS9]
          Length = 359

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 107/365 (29%), Positives = 171/365 (46%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  AL +N   ++  + N++  AVVK N YG G   +A +L +     F V  +EE + 
Sbjct: 8   INTDALTHNIRQLHLQAPNSKLLAVVKANGYGHGLLHVAKSLPD--ADAFGVARIEEALT 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G +   +  +  TN I  +    +     +           L++DT
Sbjct: 66  LRAGGVVKPILLLEGFYGASDLPVIVTNNIHTVVHSIEQLEALESAELDNQAVVWLKIDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++  D          + +    +SH  CADD +S+V + Q+  F +L    
Sbjct: 126 GMHRLGVRPEQLDDVVQRLHACDNVAKPLRYMSHFGCADDLASNVTNQQINTFLSLTEGC 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTAEARIIL 244
           +G E SLA+S+GIL  P+   +  RPGI +YG +             MQ V+T  + +I 
Sbjct: 186 RG-ERSLAASAGILAWPDSQLEWIRPGIIMYGVSPFTEPDRSAEAFNMQPVMTLTSSLIA 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R    GE V YGG     RD+ + V AIGY DGYP T              G    + G
Sbjct: 245 VRDVKEGEQVGYGGIWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVLVNG 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +VP+ G+++MDM   D+  +   +VGD   ++G  +  + VA   GT  Y+L+ ++ +R
Sbjct: 294 RIVPMAGRVSMDMLTVDLGPNAQDKVGDEAILWGNGLPAEVVAEHIGTIAYELVTKLTSR 353

Query: 365 YAKFY 369
               Y
Sbjct: 354 VDMTY 358


>gi|291519681|emb|CBK74902.1| alanine racemase [Butyrivibrio fibrisolvens 16/4]
          Length = 389

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 161/381 (42%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++L A+  N+  +    G N +   VVK +AYG G  ++A  L   G     V+
Sbjct: 6   RRTWAEVNLDAIAYNYKKIKEKIGENTKFLGVVKADAYGHGSVQVAQLLEEIGADYLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVSH 122
           S +E ++LR+   +  I +L      Q   + + N+   +        + ++ + CG + 
Sbjct: 66  SADEALELRVNGIKMPILILGHTPKEQVGRLIEYNITQAITCKAKADEYSAEAVKCGGTL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDF-----THNSFNKKLGQLSLIISHLACADDP---SSHV 174
              ++VDTG +RLG                 + N        I +H A AD+        
Sbjct: 126 KVHIKVDTGMSRLGYLCDNGYFDTGVDGIVEACNMPGLSAEGIFTHFAVADEFGDECDKY 185

Query: 175 NSVQLERFRTLIS------HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
              Q E F  +I         K      A++  +   P  +  + RPG+ LYG   +   
Sbjct: 186 TKHQFELFTGVIEAVEEKLGRKFAIRHCANTGAVARFPETYLDMVRPGLLLYG-YGEFAH 244

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +T +  +  I+   AG  +SYGG  K  + + I V   GYADG+  +LS   S
Sbjct: 245 EMGLKPAMTMKTTVSTIKIYPAGTAISYGGIFKTEKTTRIGVLPYGYADGFLRSLSNKCS 304

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
            ++                 + GKI MDM M DITD  S++VG  ++IFG    +D++A 
Sbjct: 305 LYTKEG-----------PAKLRGKICMDMCMIDITDMPSVDVGSEVEIFGEKNSIDELAE 353

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT  Y+L   +  R  + Y
Sbjct: 354 LAGTIPYELTCAVSKRVPRVY 374


>gi|52425237|ref|YP_088374.1| alanine racemase [Mannheimia succiniciproducens MBEL55E]
 gi|81825540|sp|Q65TC1|ALR_MANSM RecName: Full=Alanine racemase
 gi|52307289|gb|AAU37789.1| Alr protein [Mannheimia succiniciproducens MBEL55E]
          Length = 357

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 15/363 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +   +KI   ALK+N   +   + +++  AVVK NAYG G E ++  L N  V  F V  
Sbjct: 2   KPATVKISSVALKHNIQIIKQKAPHSKIIAVVKANAYGHGVEFVSSTLENL-VDGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + +R       I +L G    ++  I   N I  +          K  +       
Sbjct: 61  LAEALSVRSNGVTKPILLLEGFFSPKDLPILSVNNIQTVVHNQDQLDAIKRANLENPIKV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +RLG+SL+E   + +   N         +SH + AD+  S   ++QL RF  
Sbjct: 121 WLKIDTGMHRLGVSLEEVDYYYNELMNCPNVDEVGFVSHFSRADETDSDYTNIQLNRFLD 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARI 242
              + KG   ++A+S GIL   + H +  RPGI +YG +     +  + +  V+T  + +
Sbjct: 181 ATKNKKG-NRTIAASGGILFWEDSHLEYIRPGIIMYGVSPINIPSSEYGLIPVMTLTSSL 239

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R    GE V YGG     RD+ I V AIGY DGYP             V  G   +I
Sbjct: 240 IAVRDHKKGEPVGYGGIWVSERDTKIGVVAIGYGDGYPRN-----------VPAGTPIYI 288

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+      +VGD   ++G ++ +++VA  +G  +Y+L+ ++ 
Sbjct: 289 NGRRVPIVGRVSMDMVTVDLGPDCKDKVGDEAVLWGKELPIEEVAEITGLLSYELMTKLT 348

Query: 363 TRY 365
            R 
Sbjct: 349 PRV 351


>gi|52840976|ref|YP_094775.1| hypothetical protein lpg0739 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54296765|ref|YP_123134.1| hypothetical protein lpp0804 [Legionella pneumophila str. Paris]
 gi|81822627|sp|Q5X709|ALR_LEGPA RecName: Full=Alanine racemase
 gi|81823455|sp|Q5ZXJ2|ALR_LEGPH RecName: Full=Alanine racemase
 gi|52628087|gb|AAU26828.1| alanine racemase [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|53750550|emb|CAH11952.1| hypothetical protein lpp0804 [Legionella pneumophila str. Paris]
          Length = 357

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 172/366 (46%), Gaps = 17/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +  L+   +  A+VK NAYG G  ++AP L +  ++ F V 
Sbjct: 2   SRPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVL-DGRIEAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + +R    +    +  G+    E  +   N    +    Q   +           
Sbjct: 61  CLEEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAQQLEWLIKTPLPYPIK 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             ++V+TG +RLG  + E             + +   +++HLACAD+P    N  Q+  F
Sbjct: 121 VWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKSIGLMTHLACADEPHRPENQQQISLF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
           +  IS     + S+A+S+ I+  P+    + RPGI LYG +   N+      +  V+   
Sbjct: 181 QE-ISIPGFRQRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNAHDLGLIPVMRFM 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  I    +   V YGG  K  + S I V A GY DGYP  +S               
Sbjct: 240 SAISAIHDNPSFAQVGYGGTWKSDKPSRIGVVAAGYGDGYPRHIS-----------EKTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +++G  V I+G+++MDM   D+T+   IE+GD ++++G  + ++ +A ++GT  Y+LL 
Sbjct: 289 VWVRGREVSIVGRVSMDMLTIDLTEHPDIEIGDEVELWGTHVLVERIAKSAGTVGYELLC 348

Query: 360 RIGTRY 365
           +I  R 
Sbjct: 349 QISERV 354


>gi|23100681|ref|NP_694148.1| D-alanine racemase [Oceanobacillus iheyensis HTE831]
 gi|50897490|sp|Q8ELK1|ALR2_OCEIH RecName: Full=Alanine racemase 2
 gi|22778915|dbj|BAC15182.1| D-alanine racemase [Oceanobacillus iheyensis HTE831]
          Length = 392

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 159/379 (41%), Gaps = 23/379 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S      ++ L A+ +N  +      +  +  AVVK + YG G  ++A     AG     
Sbjct: 5   SYRDTWTEVSLDAIHHNVTAFKNHIDHHTKLMAVVKADGYGHGAVEVAQEALTAGADYLA 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           V  ++E ++LR     A + VL   HP   K   +  +   + +                
Sbjct: 65  VAILDEAIQLRDAGIDAPLLVLGYTHPDGLKTAIEQQITLTVFTKEDAEQVKIAAELLQK 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    L++++G NR+G++ +E       + +     L    +H A AD+       +Q  
Sbjct: 125 TARIHLKIESGMNRIGIATKEEAVEIAKALHSSFVMLEGAFTHFADADNTDPTYTEMQFH 184

Query: 181 RFRTLISH---YKGIEA-SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
           RF  +ISH   +  I      +++  +  P+ H  + R GI +YG   + +      ++ 
Sbjct: 185 RFNQIISHLRTHCHIPIVHCCNTAATIAYPDMHLDMVRVGIGIYGLYPETHLKELIDLKQ 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++ + + + I+       +SYG      R S IA   IGYADG+   LS          
Sbjct: 245 AMSLKTKPVYIKTVDQDTAISYGLTFTTERKSTIATMPIGYADGFSRLLSNR-------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   +     PI+G+I MD +M D+TD  ++ + D I IFG      I +++VA   
Sbjct: 297 ---GDVIVHAGRAPIVGRICMDQSMIDVTDVENVGLDDVITIFGEPTEGYIAMEEVANLM 353

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+    IG R  + Y
Sbjct: 354 GTIHYETACLIGKRVPRIY 372


>gi|256838760|ref|ZP_05544270.1| alanine racemase [Parabacteroides sp. D13]
 gi|256739679|gb|EEU53003.1| alanine racemase [Parabacteroides sp. D13]
          Length = 821

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/369 (24%), Positives = 151/369 (40%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N++     L    +   +VK   YG G  ++A  L         V   +E
Sbjct: 463 LEVNLDAIVHNFNQYRSKLKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           G +LR       I V+         +  +     V S         +    G++ +P  +
Sbjct: 523 GAELRKEGISIPIIVMNPEFSSFNVLFENHLEPEVYSFRLLDAMIRETERRGITSYPIHI 582

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++          +       + SHLA +D          QL++F   
Sbjct: 583 KIDTGMHRLGFQPEDVPAICERLIAQSGVIARSVFSHLAGSDSYVFDDFTHQQLDKFTKA 642

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                      +   + +S+GI     Y   + R GI LYG +    K     +  T + 
Sbjct: 643 AGELESGLEYKVIKHILNSAGIERFAAYQMDMVRLGIGLYGVSASGQKGLRNVS--TLKT 700

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AG+ + Y     + RDS IA+  IGYADG     S            GG+ 
Sbjct: 701 TILQIQNVPAGDSIGYSRMSYVKRDSRIAIIPIGYADGLDRHFSNG----------GGEV 750

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G   PI+G I MD  M D+TD+   + GD + IFG ++ + +++    T  Y++L  
Sbjct: 751 LINGQRCPIIGNICMDACMIDVTDTH-AQEGDAVIIFGDELPVSELSDKLKTIPYEILTS 809

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 810 ISPRVKRVY 818


>gi|227891789|ref|ZP_04009594.1| alanine racemase [Lactobacillus salivarius ATCC 11741]
 gi|227866448|gb|EEJ73869.1| alanine racemase [Lactobacillus salivarius ATCC 11741]
          Length = 371

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 159/380 (41%), Gaps = 27/380 (7%)

Query: 3   SNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   R  I L A+K+N    ++ L       AVVK NAYG G   +A A   AG   F 
Sbjct: 5   RHRNTRAIISLEAIKHNVATQISKLKDGQSLFAVVKANAYGHGMIPVAKAAKEAGANGFC 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV- 120
           V  ++EG+ LR    +  I +L      +   +   +L   + ++  LT   KL+     
Sbjct: 65  VAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQ 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
           S    L +DTG  R+G    E L    +   K   QL      +H + AD         Q
Sbjct: 125 SLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKHSDQLKCEGVFTHFSTADSKDPAYFEKQ 184

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ++F  L+   K     +   +S+  L  PN+   L R GIS+YG       I+++  ++
Sbjct: 185 SQKFDELVGVLKKKPKYIHQANSATALWHPNFEGNLVRMGISMYGLNPSGDVIDETWNLE 244

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ E+ ++ +++  AG  + YG     ++   I    IGYADG+   + G        
Sbjct: 245 PALSLESELVAVKEVEAGSSIGYGATYTSSQSEWIGTVPIGYADGWLRRMQGF------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                K  I G    I+G++ MD  M  +     +  G  + + G +    I   DVA  
Sbjct: 298 -----KVLIDGQYCEIVGRVCMDQFMVRLPKKYDL--GTKVTLIGENNGKVITAQDVANY 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T +Y+++  I  R  + Y
Sbjct: 351 ADTIHYEIMCNITERVPRIY 370


>gi|301301060|ref|ZP_07207220.1| alanine racemase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300851330|gb|EFK79054.1| alanine racemase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 371

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 159/380 (41%), Gaps = 27/380 (7%)

Query: 3   SNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   R  I L A+K+N    ++ L       AVVK NAYG G   +A A   AG   F 
Sbjct: 5   RHRNTRAIISLEAIKHNVATQISKLKDGQSLFAVVKANAYGHGMIPVAKAAKEAGANGFC 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV- 120
           V  ++EG+ LR    +  I +L      +   +   +L   + ++  LT   KL+     
Sbjct: 65  VAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQ 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
           S    L +DTG  R+G    E L    +   K   QL    I +H + AD         Q
Sbjct: 125 SLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKHSDQLKCEGIFTHFSTADSKDPAYFEKQ 184

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ++F  L+   K     +   +S+  L  PN+   L R GIS+YG       I+++  ++
Sbjct: 185 SQKFDELVGVLKKKPKYIHQANSATALWHPNFEGNLVRMGISMYGLNPSGDVIDETWNLE 244

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ E+ ++ +++   G  + YG     ++   I    IGYADG+   + G        
Sbjct: 245 PALSLESELVAVKEVEVGSSIGYGATYTSSQSEWIGTVPIGYADGWLRRMQGF------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                K  I G    I+G++ MD  M  +     +  G  + + G +    I   DVA  
Sbjct: 298 -----KVLIDGQYCEIVGRVCMDQFMVRLPKKYDL--GTKVTLIGENNGKVITAQDVANY 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T +Y+++  I  R  + Y
Sbjct: 351 ADTIHYEIMCNITERVPRIY 370


>gi|160895303|ref|ZP_02076074.1| hypothetical protein CLOL250_02862 [Clostridium sp. L2-50]
 gi|156862996|gb|EDO56427.1| hypothetical protein CLOL250_02862 [Clostridium sp. L2-50]
          Length = 388

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/384 (23%), Positives = 169/384 (44%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+    +   I+L  ++ N   M A    + +  AV+K +AYG G  +++ AL +     
Sbjct: 1   MNKYRRIEADINLDNIRENIKMMKACVPESMKMLAVIKADAYGHGAVEVSRALSDL-ADF 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           + +  ++E V+LR    +  + +L    P +   +   ++ P +    +    S      
Sbjct: 60  YAIACIDEAVELRHAGCEKPLLILGYTDPSEYDELITYDVRPAMYDKAECAILSDDAVKK 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      +++DTG +R+G    +A ++      +    ++  I +H + AD+      + 
Sbjct: 120 GTKAKIHIKMDTGMSRIGFQCDDAGINDIVEIAHMPGIEVEGIFTHYSKADEYDKTAANG 179

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           QL  FR++I   +          +++S+GI+   N  F + R GI  YG        H +
Sbjct: 180 QLALFRSVIGRLEERGISIPVKHISNSAGIMEMDNEGFDMVRSGIVTYGLYPSDEVDHSI 239

Query: 233 ---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              +  +   A+++ ++   AG  + YG       D  IA  + GYADGYP   S +   
Sbjct: 240 AALKPAMELLAKVVHVKDVKAGTGIGYGWTFVAPHDMRIATVSAGYADGYPRAQSNI--- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G+  I G   PI G++ MD  M D++D     VGD + + G     +I +++
Sbjct: 297 --------GRVIIHGKYAPITGRVCMDQFMIDVSDIPETAVGDTVVLIGKCGDKEITVEE 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA  + + NY+L+  IG R  + Y
Sbjct: 349 VAEPANSFNYELICNIGRRVPRVY 372


>gi|149377612|ref|ZP_01895350.1| alanine racemase [Marinobacter algicola DG893]
 gi|149358085|gb|EDM46569.1| alanine racemase [Marinobacter algicola DG893]
          Length = 366

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/372 (27%), Positives = 168/372 (45%), Gaps = 23/372 (6%)

Query: 6   FLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             R    +ID  AL++N+     L+  AR  AV+K + YG G  ++A AL  +    F V
Sbjct: 1   MPRKTVARIDTRALRHNYRLACRLASPARAMAVIKADGYGHGIREVARAL-ASDAPKFAV 59

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             +EE + +R       + +L G+H  G            V+ S  QL +  +       
Sbjct: 60  ACLEEALAIREAGVDHPVVLLQGMHSAGDVATCVCEGFEVVVHSGYQLDWLDQ---ADER 116

Query: 122 HPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               ++V+TG NRLG +    A              ++  ++H ACADD S      Q  
Sbjct: 117 PTVWVKVNTGMNRLGFAPSVLADVMARLDTIGAGETVAGFVTHFACADDISRDDTDQQTR 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
            F   +  +  +E S ++S+   L     F  TRPGI LYG +  + K+ P    + V+T
Sbjct: 177 VFSEAVVDWPKLEKSASNSAAHFLPAQPSFDWTRPGIMLYGASPTLGKTGPELGLEAVMT 236

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            EA +  +R    GE V YG      +++ + + AIGY DGYP                 
Sbjct: 237 LEAPLTAVRTLKPGESVGYGYSWTAIQETRMGIVAIGYGDGYPRHAG-----------TD 285

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              ++ G  + ++G+++MDM   D+T +     GD ++++G ++ +D+VA  +GT  Y+L
Sbjct: 286 TPAWVGGNRIRLIGRVSMDMLAVDLTGAPEACPGDLVELWGRNVSVDEVAQHAGTIGYEL 345

Query: 358 LVRIGTRYAKFY 369
           L  I  R  + Y
Sbjct: 346 LTGITARVPRLY 357


>gi|238922140|ref|YP_002935654.1| alanine racemase [Eubacterium eligens ATCC 27750]
 gi|238873812|gb|ACR73520.1| alanine racemase [Eubacterium eligens ATCC 27750]
          Length = 389

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 94/381 (24%), Positives = 159/381 (41%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +ID+ AL +N+ ++    G N +   VVK +AYG G  +++  L  +G     V+
Sbjct: 6   RRTWAEIDMDALAHNYETLRKRIGENVKFLGVVKADAYGHGSVQVSRLLQESGADYLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVSH 122
           S++E V+LR       + +L      +   +   N+   V      L +  + + CG + 
Sbjct: 66  SIDEAVELRHNGITMPVLILGHTPKEEVSELIKNNITQAVTCRAKALEYSEEAVKCGGTL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDF-----THNSFNKKLGQLSLIISHLACADDP---SSHV 174
              ++VDTG +RLG                            I +H A +D+        
Sbjct: 126 KIHIKVDTGMSRLGYLCDGDYFESGVEGICEGCTLPGLDAEGIFTHFAVSDEFGEEYESY 185

Query: 175 NSVQLERFRTLISHYKGI------EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
              Q E F ++I   +            A++  +   P     + RPG+ LYG  D   +
Sbjct: 186 TKHQFELFTSVIDEVEKKLGKKFKIRHCANTGAVARYPETWLDMVRPGLLLYGYGDF-AQ 244

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V++ +  +  I+   AG  +SYGG  K  R + + V   GYADGY   LS    
Sbjct: 245 ELGLKPVMSLKTTVSTIKTYPAGTAISYGGIYKTDRKTRMGVVPYGYADGYFRCLSNRYE 304

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
             +                P  GKI MDM M D+TD ++++VG  ++IFG    ++ +A 
Sbjct: 305 LMTEEG-----------PAPQRGKICMDMCMIDLTDKMNVDVGSEVEIFGKANPIEHMAQ 353

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT  Y+L   +  R  + Y
Sbjct: 354 LAGTIPYELTCAVSKRVPRMY 374


>gi|20137250|sp|Q9S5V6|ALR_BACPS RecName: Full=Alanine racemase
 gi|4586399|dbj|BAA76373.1| alanine racemase [Bacillus psychrosaccharolyticus]
          Length = 383

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 160/384 (41%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R    +I+L A+  N  +M   L       AVVK NAYG G  ++A     AG
Sbjct: 1   MTLQNFYRDTWAEINLDAIFENAANMKKHLPPEITLFAVVKANAYGHGDVEVAETAIQAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P   +I    ++   +     L      +
Sbjct: 61  AGYLAVAFLDEALALRKKGITAPILVLGASRPEDAQIAARESITLTVFQAGWLEAAQSFL 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL-SLIISHLACADDPSSHVN 175
             G      L+ D+G  R+G+  QE ++       K    +   I +H A AD   +   
Sbjct: 121 E-GTVLTIHLKCDSGMGRIGIRKQEEMNEIERFLQKTKCFVLEGIFTHFATADQLDTEYF 179

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----S 229
           S QL RF  +++  K     +   +S+ +L  PN  F   R GISLYG +  +       
Sbjct: 180 SKQLARFEEMLTWLKEKPKYVHAANSAALLRFPNAVFNSVRMGISLYGLSPSMEMKEVLP 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++   + + +++ ++    G+ VSYG       D+ I    IGYADG+   L G    
Sbjct: 240 FALRPAFSLKTKLVHVKNISKGQSVSYGATYTAEEDTWIGTLPIGYADGWIRMLQGQ--- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                    +  ++G   P++G+I MD  M  ++    +  G  + + G +    I +DD
Sbjct: 297 ---------EVLLEGGRSPLVGRICMDQCMVKLSREFPV--GTEVTLIGKNGTECITVDD 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + Y
Sbjct: 346 IAEKLNTINYEVTCMISSRVPRMY 369


>gi|260424611|ref|ZP_05732650.2| alanine racemase [Dialister invisus DSM 15470]
 gi|260402530|gb|EEW96077.1| alanine racemase [Dialister invisus DSM 15470]
          Length = 361

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 155/371 (41%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++IDL A ++N   + +   N    AV+K NAYG G  +   A    G     V  VEEG
Sbjct: 1   MEIDLRAFRHNLRVIRSHLKNVPALAVIKANAYGHGAVECLRAALEEGCVGAAVARVEEG 60

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL-Q 127
             +R       ++VL    P +  +  +  LI  +     L       S        +  
Sbjct: 61  RVVRASGFDCPVYVLGLPLPEEMSVGVNEELILPVDDTTNLEALEIAASTLKKMVEVMLP 120

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NR+G   ++   F           +  + +HLA AD  +      QL  F   +S
Sbjct: 121 IDTGMNRIGTHAKDLSAFLEKLKRYPHLHIHGLFTHLATADAKNKSKTYKQLAEFEEALS 180

Query: 188 HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVVTAEARI 242
               +E  + S++     +  P   + L RPGI  YG +          ++ ++T  + I
Sbjct: 181 AMPSLENLVISAASSAGVVDIPESWYNLVRPGIIQYGPSPSNTMLNYLDLKYMMTVVSHI 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
             ++    GE V YG      +D  IA   IGYADGYP  LS             G   I
Sbjct: 241 THVQVVHKGETVGYGATYTAGKDMRIATIPIGYADGYPRALSN-----------KGAVLI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLL 358
                PI+G+I MD  M  + D  ++  GD + + G     +IK+D++A  +GT +Y++L
Sbjct: 290 GEKRCPIVGRICMDQLMAAVDD--TVMPGDEVVLIGKQGDEEIKVDELAELAGTIHYEIL 347

Query: 359 VRIGTRYAKFY 369
             +  R  + +
Sbjct: 348 CGL-RRIPRIF 357


>gi|311071135|ref|YP_003976058.1| alanine racemase [Bacillus atrophaeus 1942]
 gi|310871652|gb|ADP35127.1| alanine racemase [Bacillus atrophaeus 1942]
          Length = 389

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 161/384 (41%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M+   F R    +I+L+A++ N  +M    G+     AVVK NAYG G  ++A A  +AG
Sbjct: 1   MNIKPFYRDTWAEINLSAIEENVSNMKKHIGDRVELMAVVKANAYGHGDAEVAEAALSAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL  + P   +I  + ++     SV  +   ++ +
Sbjct: 61  ASCLAVAILDEAISLRKRGLAAPILVLGAVPPEYVEIAAEYDVTLTGYSVEWIQEAARHI 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVN 175
                  + L+VDTG NRLG+  +E +                 + +H A AD+      
Sbjct: 121 -KETPVHFHLKVDTGMNRLGVKTEEEVQNVMKILERNPGLLCKGVFTHFATADEKDRSYF 179

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKS 229
            +Q ERF+ LI+   +K +    A+S+  L      F   R G+ +YG            
Sbjct: 180 LMQFERFKELIAPLPWKQLMVHCANSAAGLRLKKGFFNAVRFGVGMYGLRPSAEITNEIP 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++K   GE VSYG      +D  I    +GYADG+   L      
Sbjct: 240 FRLHQAFTLNSTLTHVKKIHKGESVSYGATYTAEKDQWIGTVPVGYADGWLRKLQ----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  G +  I G  + I G+I MD  M ++        G  + + G      I +D+
Sbjct: 295 -------GTEVLINGKRLKIAGRICMDQFMVELDKEYP--PGSRVTLIGRQKDDCITVDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IASRLETINYEVTCTISSRVPRMF 369


>gi|156932325|ref|YP_001436241.1| alanine racemase [Cronobacter sakazakii ATCC BAA-894]
 gi|156530579|gb|ABU75405.1| hypothetical protein ESA_00100 [Cronobacter sakazakii ATCC BAA-894]
          Length = 359

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + ++  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVVNRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +                +     +  +        +
Sbjct: 62  EALRLREGGITQPILLLEGFFNAADLPAIAAQRFHTAVHSEEQLAALEQATLSEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  + A  F    +  K + Q   ++SH A AD+P       QL+ F + 
Sbjct: 122 KLDTGMHRLGVRPEAAQAFYDRLAACKNVRQPVNVVSHFARADEPDCGATERQLDIFNSF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GIL  P  HF   RPGI LYG +             Q  ++  + 
Sbjct: 182 THDKPG-KRSIAASGGILFWPQSHFDWVRPGIILYGLSPLDTHPWGAELGFQPAMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPR-----------CAPTGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+    + + GD + ++G  + ++ +A A+G + Y+L+ R+
Sbjct: 290 VNGREVPIVGRVAMDMICVDLGPDAAEKAGDTVIMWGEALPVERIAEATGVSAYELVTRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMRY 357


>gi|307609535|emb|CBW99033.1| hypothetical protein LPW_08181 [Legionella pneumophila 130b]
          Length = 357

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 17/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +  L+   +  A+VK NAYG G  ++AP L +  ++ F V 
Sbjct: 2   SRPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVL-DGRIEAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + +R    +    +  G+    E  +   N    I    Q   +           
Sbjct: 61  CLEEALAIRALGVETSCILFQGVFSSDELSVAVENDFACILHHAQQLEWLIKTPLPYPIK 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             ++V+TG +RLG  + E             + +   +++HLACAD+P    N  Q+  F
Sbjct: 121 IWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKNIGLMTHLACADEPHRPENQQQISLF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
           +  IS     + S+A+S+ I+  P+ H  + RPGI LYG +   N+      +  V+   
Sbjct: 181 QE-ISIPGFRQRSIANSAAIISFPDSHADVVRPGIMLYGVSPFANQNARDLSLIPVMRFM 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  I    +   V YGG  K  + S I + A GY DGYP  +S               
Sbjct: 240 SAISAIHDNPSFAQVGYGGTWKSDKPSRIGIVAAGYGDGYPRHIS-----------EKTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +++G  V I+G+++MDM   D+T+   +E+GD ++++G  + ++ +A ++GT  Y+LL 
Sbjct: 289 VWVRGREVSIVGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTVGYELLC 348

Query: 360 RIGTRY 365
           +I  R 
Sbjct: 349 QISERV 354


>gi|166713563|ref|ZP_02244770.1| alanine racemase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 366

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G ++  AVVK +AYG G  + A AL       F V  
Sbjct: 2   RPAHASIDLEALRHNYRLAKRL-GGSKALAVVKADAYGHGAVRCAQALEPE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I +L G     E  +   + +  +++ PQ                
Sbjct: 60  IEEALELRQAGIRAPILLLEGFFEHDELRLIAEHDLWTVAATPQQVRALAAFQSPRPLRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGLS ++                 ++++HLA AD+        Q   F  
Sbjct: 120 WLKMDSGMHRLGLSPEDFRAAWLRLRGLPQIASLVLMTHLARADELDCSRTDQQAVAF-A 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEAR 241
           L +     E SL +S G+L  P      +RPG+ LYG       +      + V+T  +R
Sbjct: 179 LSAGGMRAETSLRNSPGLLGWPALRNDWSRPGLMLYGANPFPQDTENTAQLRPVMTLRSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R    GE V YG +    R + + V A+GYADGYP                G    
Sbjct: 239 IISVRDLPVGEPVGYGARFVAERPTRVGVVAMGYADGYPQFAPN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G + P++G+++MDM   D+TD     +G  +Q++G   ++  +A     + Y LL  +
Sbjct: 288 VDGQVCPLIGRVSMDMLTVDLTDHPQAAMGATVQLWGQAPRVGPLATQCNVSAYQLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRVPRTY 354


>gi|92114747|ref|YP_574675.1| alanine racemase [Chromohalobacter salexigens DSM 3043]
 gi|122419409|sp|Q1QU82|ALR_CHRSD RecName: Full=Alanine racemase
 gi|91797837|gb|ABE59976.1| alanine racemase [Chromohalobacter salexigens DSM 3043]
          Length = 364

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 153/370 (41%), Gaps = 17/370 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  L   IDL AL+ N+      + ++R  AVVK +AYG G    A AL +     F V 
Sbjct: 2   SRPLIADIDLDALRRNYCLARDQAPHSRAIAVVKADAYGHGAVACADALRDL-APAFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + LR       I +L G     E  + D + +                      P
Sbjct: 61  CLEEALTLREAGITQPIVLLEGFFDAAELSLIDAHRLWTAVHSDWQIDALLAYRPRQPIP 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERF 182
             L++D+G +RLG + +                    +++H A AD   +     Q+   
Sbjct: 121 TWLKLDSGMHRLGFAPEAFEARWQRLAAATEHVTDLHLMTHFATADALDAAYFRRQMACI 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
              +         LA+S   L  P  H    RPG+ LYG        + S  ++ V+T  
Sbjct: 181 -ASLRQRLEAPVCLANSPATLAWPEAHGDWNRPGVMLYGSDPLEGANDASRALEPVMTLR 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +R+   GE V YGG+ + +R S I V A GY DGY                 G  
Sbjct: 240 SEIIAVRELAEGEAVGYGGRWRASRPSRIGVVAGGYGDGYDRHA-----------RDGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G  VP+ GK++MDM   D+T+     +G  + ++G  + +D+VA    T +Y L+ 
Sbjct: 289 VLVEGQRVPLAGKVSMDMLTVDLTELPEAGIGSPVVLWGEGLPIDEVARHCDTISYTLMT 348

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 349 GVLPRVPRRY 358


>gi|329928943|ref|ZP_08282753.1| alanine racemase [Paenibacillus sp. HGF5]
 gi|328937195|gb|EGG33622.1| alanine racemase [Paenibacillus sp. HGF5]
          Length = 395

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/384 (23%), Positives = 168/384 (43%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+L  L+ N+++   AL  + +  A VK NAYG G  ++A  L   G     V 
Sbjct: 6   RPTLAEINLDHLRANYNAFREALPDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSH 122
            ++E ++LR       I VL    P   +I ++ +  I + SS       +  +      
Sbjct: 66  FLDEALELRQGGISVPILVLGYTPPEAVEIAYEYDVTITLFSSEVLQAIKALPVKPEKPL 125

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++D+G  RLGL   ++A+ F   +F+     +  + +H A AD+ +      Q  R
Sbjct: 126 KVHIKIDSGMGRLGLLPGEDAISFIEEAFSLPQVVVEGMFTHFARADEENKDYTLGQYRR 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F+ +    +  +  +      +S+  +  P   + + R GI LYG         K+  ++
Sbjct: 186 FQGVADALRDKDYHIPIIHTGNSAAAIDTPELSYNMVRVGIGLYGLYPSDEVNRKTVSLR 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T + +++ ++       +SYG +    ++  I    IGYADG+   LSG        
Sbjct: 246 PVMTLKTKLVYVKNLPPHSGISYGTKYVTEQEERIGTLPIGYADGFSRMLSG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGPD----IKLDD 345
                +  I+G  VP++G I MD  M  +     ++  I+ G+ + + G      I  D+
Sbjct: 298 ---KAEVLIRGRRVPVVGNICMDQCMVSLKSFAEEAEQIKAGEEVVLIGQQSGECITADE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  I  R  + Y
Sbjct: 355 LAAKLGTIHYEVVCMIAHRVPRLY 378


>gi|268589444|ref|ZP_06123665.1| alanine racemase [Providencia rettgeri DSM 1131]
 gi|291315109|gb|EFE55562.1| alanine racemase [Providencia rettgeri DSM 1131]
          Length = 359

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 23/367 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L  L++N   +    GN++  +V+K + YG G ++I PAL       F V  
Sbjct: 3   RPISAVIHLQNLQHNLAIVRQHVGNSKIWSVMKADGYGHGIKQIWPALKE--TDGFGVLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            +E + LR    +  I +L G    Q+  + D   +          F  +          
Sbjct: 61  FDEAILLRKEGWKGPILLLEGFFQPQDLQLIDQYNLTTSVHSEWQLFAIENAQLSSPISV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFR 183
            +++++G NRLG S  E              +   ++SH A +D  +       Q+++F 
Sbjct: 121 YIKLNSGMNRLGFSPSEYESVVQRLSKMLNVRSLTLMSHFANSDTKTGVTEPFQQIQQFE 180

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAE 239
            L      +E  +A+S   L   +  +   R GI LYG +     +      ++  +T +
Sbjct: 181 HLS-----LETCIANSGATLWHKHTQYDWIRTGILLYGASPSGKSTDISGLGLKAAMTLQ 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I +  AG+ + YG +   T+   IA  A GYADGYP   +               
Sbjct: 236 SEVIAIHEIPAGQSIGYGSRFTSTKPMRIATVACGYADGYPRHAANR-----------TP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            + KG    +LG ++MDM   DI+D   +++G+ ++++G ++ +D+VA A+GT  Y+LL 
Sbjct: 285 VWCKGKRCALLGAVSMDMLTIDISDCGDVKLGERVELWGQNLPVDEVAQAAGTIGYELLC 344

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 345 ALAKRVP 351


>gi|160944933|ref|ZP_02092160.1| hypothetical protein FAEPRAM212_02449 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444117|gb|EDP21121.1| hypothetical protein FAEPRAM212_02449 [Faecalibacterium prausnitzii
           M21/2]
          Length = 400

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/394 (23%), Positives = 157/394 (39%), Gaps = 35/394 (8%)

Query: 1   MHSNEF---LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M    F   +  +IDL AL+ N+  + A +G     AVVK ++YG G  + A      G 
Sbjct: 1   MQKQPFEKHVWAEIDLEALRYNFREVKARAGALPLCAVVKADSYGHGAVQCARVFAEEGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V+ + E V+LR       I +L  + P     +   ++     S+ Q    S+   
Sbjct: 61  AWLAVSCLTEAVQLRKAGQTLPILILGHVQPAYAAALIQNDITVACYSLAQAHALSEAAV 120

Query: 117 SCGVSHPYALQVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
           + G      L+ DTG  R+G         A+     +      +++ +  H + ADD + 
Sbjct: 121 AAGGRVHIHLKADTGMGRIGFALRTDFDAAIREMLEACALPGLEMTGLFQHFSVADDTAP 180

Query: 173 H---VNSVQLERF-----RTLISHYKGIEASLASSSGILLGPNYH------FQLTRPGIS 218
                 + Q   F         +  +       +S+G++L P++         + RPGI 
Sbjct: 181 ENVAYTAEQHALFVKAFHALKAAGREPALVHCDNSAGVMLHPDWPEGLPRERCMARPGII 240

Query: 219 LYGGTDKINKSHPMQTV-VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           LYG               +T +  + +I++   G+  SYG +    + + +A    GYAD
Sbjct: 241 LYGYDPSDEVRFGRFKPVMTLKTVVSMIKEMQPGQCASYGRRFTAEKPTKVATLCTGYAD 300

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP  LS             G   I G   P+LG++ MD  M D+TD   +   D   ++
Sbjct: 301 GYPRLLS----------CGKGVVEIHGKACPVLGRVCMDQMMVDVTDVPEVREDDEAILW 350

Query: 338 GPDI--KLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G  +    + +A  + T  Y++L  +  R  + Y
Sbjct: 351 GGTVSDTAETIARKTDTIPYEVLCGVSRRVPRVY 384


>gi|116748009|ref|YP_844696.1| alanine racemase [Syntrophobacter fumaroxidans MPOB]
 gi|189027394|sp|A0LFQ9|ALR_SYNFM RecName: Full=Alanine racemase
 gi|116697073|gb|ABK16261.1| alanine racemase [Syntrophobacter fumaroxidans MPOB]
          Length = 375

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 167/368 (45%), Gaps = 23/368 (6%)

Query: 8   RLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++IDL AL++N+      L+  +R   VVK +AYG G   +A  L   G     V+   
Sbjct: 5   WVEIDLAALRHNYSRAKERLAPGSRILGVVKSDAYGHGMIPVARELVACGASFLAVSKHW 64

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E V LR    +  I  L G+ P +        + PVI  +      S        +    
Sbjct: 65  EAVDLRAAGIRLPILCLLGVEPSEMAEAIRNEIRPVIYRIDHARRLSDTARSLNATATVH 124

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG  RLG+  +    F +        +L  ++SH A AD+     +++QL RFR  
Sbjct: 125 VKLDTGMGRLGIPCRHLEAFLNELLTLPAIRLEGVLSHFASADEADKTSSTLQLTRFREA 184

Query: 186 I----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTAE 239
           +    +    +   +A+S+G+L  P  HF L RPGI LYG    +    P   + V+T +
Sbjct: 185 MALLSARGLSVLGHIANSAGLLDLPQAHFDLARPGIMLYGSPPSLELHKPADLRPVMTFK 244

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++II ++   AG+ + YGG         IA   +GY DGYP  LS             G+
Sbjct: 245 SKIIQLKDVQAGQPIGYGGTFVTAAPGRIATIPVGYDDGYPRLLSNR-----------GR 293

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             ++G   P++G+++M+M   D+T   S    D + + G      +  +++A   GT +Y
Sbjct: 294 VLVRGMSAPVVGRVSMNMITADVTHIPSAREDDEVVLLGAQGTERVTAEEIAQLCGTISY 353

Query: 356 DLLVRIGT 363
           ++   IG 
Sbjct: 354 EIYCSIGR 361


>gi|323490569|ref|ZP_08095775.1| alanine racemase [Planococcus donghaensis MPA1U2]
 gi|323395835|gb|EGA88675.1| alanine racemase [Planococcus donghaensis MPA1U2]
          Length = 385

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 102/381 (26%), Positives = 167/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N    +  IDLTA+K+N       SG+A   AVVK +AYG G  ++   +   GV+ 
Sbjct: 1   MVENYRPTKAVIDLTAIKSNLTYFQEKSGDAEVIAVVKADAYGHGVLEVVKTVVAHGVRM 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V + +E + LR       + VL         I    N+I    S+  L+  ++ +   
Sbjct: 61  LAVATPDEALFLRNQGIDTELLVLGATSSQFIPIAQQHNIIVTAISLDWLSMAARHIEQN 120

Query: 120 V-SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L+VDTG  R+G+ + E  +               I +H A AD+  S + S Q
Sbjct: 121 SDPLKIHLKVDTGMRRIGVQVDEVEE-AFGFIADHDFDFKGIFTHFATADEKDSPLFSQQ 179

Query: 179 LERFRTLISH--YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPM 232
           +    T++       ++  +++S+  ++ P+      R GISLYG           +  +
Sbjct: 180 VNAMNTILDKLDDPSVKVHISNSAAAIMHPDLACDAVRIGISLYGIAPSPYVGEEMNFDL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E  +I ++K  AGE +SYG   +  +D  IA   IGYADG    L G D     
Sbjct: 240 QPALSLETEMIHVKKLKAGETLSYGATYRAEKDEWIATIPIGYADGMLRGLQGQD----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    +KG  VPI+G+I MD  M  +++  S  +G+ +Q+ G      I +D+ A 
Sbjct: 295 -------VLVKGQRVPIIGRICMDQCMIRLSEKSS--IGEKVQLIGRQGNQQILIDEWAA 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y++   +  R  + Y
Sbjct: 346 KLDTIPYEIPCILTKRVPRVY 366


>gi|256380541|ref|YP_003104201.1| alanine racemase [Actinosynnema mirum DSM 43827]
 gi|255924844|gb|ACU40355.1| alanine racemase [Actinosynnema mirum DSM 43827]
          Length = 388

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 100/375 (26%), Positives = 160/375 (42%), Gaps = 25/375 (6%)

Query: 7   LRLK--IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R +  IDL  L++N   + A +  A   AVVK + YG G  ++A     +G       S
Sbjct: 26  PRAEVVIDLDNLRHNTAYLAARAPGAELMAVVKADGYGHGAVEVARTALGSGATWLGSCS 85

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT-FYSKLMSCGVSHP 123
           + E + LR     A +                  +   +S+   L    +     G    
Sbjct: 86  IPEALALRAGGITAPVLAWLDTPDTDFAPAIAEGVDLGLSTPRALESAAAAARRAGRRAR 145

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF- 182
             L++DTG +R G    E   F   +      ++  I SHLACAD+P       Q ERF 
Sbjct: 146 VHLKIDTGLSRNGCPADEWEAFVELAAATPEVEVHAIWSHLACADEPGHPATDAQAERFD 205

Query: 183 ---RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              R  +      +  LA+S+ +L  P+ HF L RPGI+LYG     ++ H ++ V+T  
Sbjct: 206 DAYRAALRAGLDPKRHLANSAALLTRPDLHFDLVRPGIALYGLNPVPDE-HDLRPVMTFR 264

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + ++  ++  AGE VSYG       D+ +A+  +GYADG P  LS               
Sbjct: 265 SSVVRTKRIRAGESVSYGLTWTAKSDTSLALVPVGYADGVPRALSNRM-----------H 313

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNY 355
             + G   P++G++ MD  + D  D   I  GD + +FG          + A  +GT +Y
Sbjct: 314 VRLAGRRRPVVGRVCMDQVVVDCGDD-EIAEGDEVVLFGTGVDGGPTAREWADTTGTIDY 372

Query: 356 DLLVRI-GTRYAKFY 369
           +++  +   R  + Y
Sbjct: 373 EIVTGMHRPRVVRTY 387


>gi|325578240|ref|ZP_08148375.1| alanine racemase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159976|gb|EGC72105.1| alanine racemase [Haemophilus parainfluenzae ATCC 33392]
          Length = 360

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 107/364 (29%), Positives = 171/364 (46%), Gaps = 16/364 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    KI   ALK+N   +   + +++  AVVK NAYG G   ++ AL +  V  F V  
Sbjct: 4   KPATAKISSLALKHNLQVIKEKAPHSKIIAVVKANAYGHGVVFVSSALESM-VDCFAVAR 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR       I +L G    ++  I   N I  +    +     K  +       
Sbjct: 63  LEEALSLRSNGIIKPILLLEGFFDEKDLPIIAVNNIETVVHNREQLEALKRAAVPSPIKV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +RLG+SL E   F        ++      +SH + AD+  S    VQL+RF 
Sbjct: 123 WLKIDTGMHRLGVSLDEVDYFYQELKKLPQIQPHLGFVSHFSRADELDSDYTQVQLDRFL 182

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEAR 241
                  G E ++A+S GIL  P  H    RPGI +YG +    +     +  V+   + 
Sbjct: 183 QATKDKGG-ERTIAASGGILFWPEAHLDCIRPGIIMYGISPTDTVGAEFGLTPVMNLTSS 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ +R+   GE V YGG     +D+ I V AIGY DGYP             V  G   +
Sbjct: 242 LLAVREHKKGEPVGYGGIWTSPKDTKIGVVAIGYGDGYPR-----------DVPEGTPVY 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +VP +G+++MDM   D+      +VGD + ++G ++ ++ VA  SG  +Y+L+ ++
Sbjct: 291 LNGRIVPSVGRVSMDMLTVDLGADSQDKVGDEVILWGKELPIETVAKYSGILSYELITKL 350

Query: 362 GTRY 365
             R 
Sbjct: 351 TPRV 354


>gi|238061049|ref|ZP_04605758.1| alanine racemase [Micromonospora sp. ATCC 39149]
 gi|237882860|gb|EEP71688.1| alanine racemase [Micromonospora sp. ATCC 39149]
          Length = 372

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 159/375 (42%), Gaps = 27/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +++DL A++ N   + A + +A   AVVK + YG G    A A  +AG     V +++E 
Sbjct: 6   VRVDLDAIRENVTRLRAGT-SAELMAVVKGDGYGHGMLPSARAALDAGADWLGVCTLDEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           + LR     A +                  +    +S+ Q           G      L+
Sbjct: 65  LALRRAGIDAPVLAWLLAPGLPLHEGVAVGVDLAAASLTQLAEMVEASQLAGRPARLHLK 124

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +DTG  R G ++ +       +   +   L ++  + SH   AD P       QL  F  
Sbjct: 125 IDTGLARGGATVADWPALLEAAAKAQADGLIEVVGVWSHFVYADLPGHPTTDRQLAIFHE 184

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            +     +  +     LA+S+  L  P+ HF L RPGI++YG +    +   ++  +TA 
Sbjct: 185 GLDMVERAGLRPRYRHLANSAATLTRPDTHFDLVRPGIAIYGLSPVAGERFGLRPAMTAR 244

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           AR++L ++  AG  VSYG       D+ +AV  +GYADG P   S             G 
Sbjct: 245 ARVMLTKRVPAGSGVSYGHTYLTEADANLAVVPLGYADGVPRHASNT-----------GP 293

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNY 355
             + G    + G++ MD  + D  D   +  GD   +FGP    +   DD A A GT NY
Sbjct: 294 VQLAGRRRTVSGRVCMDQFVIDCGDDP-VAAGDVATLFGPGTGGEPTADDWAEAVGTINY 352

Query: 356 DLLVRIGT-RYAKFY 369
           +++ R G  R  + Y
Sbjct: 353 EIVTRFGGVRVPRVY 367


>gi|162148204|ref|YP_001602665.1| alanine racemase, catabolic [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542849|ref|YP_002275078.1| alanine racemase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786781|emb|CAP56364.1| putative alanine racemase, catabolic [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530526|gb|ACI50463.1| alanine racemase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 383

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 137/372 (36%), Positives = 199/372 (53%), Gaps = 15/372 (4%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H+     L IDL A++ N+ ++  L+  A  AAVVK +AYGLG  ++APAL   G + FF
Sbjct: 13  HARAGATLTIDLDAIRANYRTVRNLAAGAECAAVVKADAYGLGAARVAPALQEEGARTFF 72

Query: 62  VTSVEEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CG 119
           V  ++EG+ LR + +  ARI VL+G  PG EK     +LIPV++SV Q+  +  L    G
Sbjct: 73  VAHLDEGMALRRHVSADARIIVLHGAVPGAEKDCLHDDLIPVLNSVDQIQRWRGLAHEAG 132

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            + P  LQ+DTG +R GLS  E      +    +   L L+ISHLACADDP    ++ Q 
Sbjct: 133 RALPSILQLDTGMSRFGLSENEIRAIVADPDGLRGIDLRLVISHLACADDPDDPASTRQR 192

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            R   + +       SLA+SSG+ LG ++HF L RPG +LYG        +PM+ VV  +
Sbjct: 193 ARLVRMRALLPPAPVSLAASSGVFLGRDFHFDLVRPGAALYGVAPNAATPNPMRPVVRLQ 252

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ARI+  R     + V YG   + +    IA  A GYADG+  +               G 
Sbjct: 253 ARILQTRHVSPNDGVGYGLTYRPSAMRRIATIATGYADGFMRS-----------GAARGC 301

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
            ++    +P+LG+I+MD    D+TD+       G  + + GP   +DDVA A+GT  Y++
Sbjct: 302 AWLGDMQLPVLGRISMDSMTVDVTDAPETLTRPGTMVDLLGPRRGVDDVARAAGTIGYEI 361

Query: 358 LVRIGTRYAKFY 369
           L  +G RY + Y
Sbjct: 362 LTSLGHRYHRAY 373


>gi|108798118|ref|YP_638315.1| alanine racemase [Mycobacterium sp. MCS]
 gi|119867214|ref|YP_937166.1| alanine racemase [Mycobacterium sp. KMS]
 gi|126433776|ref|YP_001069467.1| alanine racemase [Mycobacterium sp. JLS]
 gi|108768537|gb|ABG07259.1| alanine racemase [Mycobacterium sp. MCS]
 gi|119693303|gb|ABL90376.1| alanine racemase [Mycobacterium sp. KMS]
 gi|126233576|gb|ABN96976.1| alanine racemase [Mycobacterium sp. JLS]
          Length = 383

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 26/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++ +DL A+ +N   +   +G+A+   V+K + YG G  ++A  + +AGV +  V +V 
Sbjct: 12  AQVVVDLDAISHNVALLRDRAGSAQVMPVLKADGYGHGATEVAKVVLDAGVTELGVATVG 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR     A +                 ++   +SSV Q       +   G++    
Sbjct: 72  EALALRADGITAPVLAWLHGPGTDFAPAVQADIQLAVSSVRQLGEILDAVHRTGMTATLT 131

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           ++ DTG +R G+S  E           +         I+SHLAC D+P +  N  Q +R 
Sbjct: 132 VKADTGLSRNGVSPAEYPALLQRLAKAQAEDAVRVRGIMSHLACGDEPDNPTNDRQAQRL 191

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
             +             A L +S   +  P+  F + RPGI++YG T         ++  +
Sbjct: 192 TDMRRQAADAGVTFEVAHLCNSPAAMTRPDLAFDMVRPGIAVYGQTPIPALGDMGLRPAM 251

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T    +   R   AG+ VSYG      RD+ +A+  IGYADG   +LSG           
Sbjct: 252 TLRCPVAQTRSIKAGDGVSYGHTWIAQRDTTVALLPIGYADGVYRSLSGRL--------- 302

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALASG 351
             +  I G + P +G+I MD  + D+      +  GD   +FGP    +    D A   G
Sbjct: 303 --QVLINGRLRPGVGRICMDQFVVDLGPGPVDVSDGDEAILFGPGTRGEHTAQDWAEIIG 360

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+++     R  + Y
Sbjct: 361 TINYEIVTSPRGRVVRTY 378


>gi|300214211|gb|ADJ78627.1| Alanine racemase [Lactobacillus salivarius CECT 5713]
          Length = 371

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 160/380 (42%), Gaps = 27/380 (7%)

Query: 3   SNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   R  I L A+K+N    ++ L  +    AVVK NAYG G   +A A   AG   F 
Sbjct: 5   RHRNTRAIISLEAIKHNVATQISKLKDSQSLFAVVKANAYGHGMIPVAKAAKEAGANGFC 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV- 120
           V  ++EG+ LR    +  I +L      +   +   +L   + ++  LT   KL+     
Sbjct: 65  VAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQ 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
           S    L +DTG  R+G    E L    +   K   QL      +H + AD         Q
Sbjct: 125 SLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKHSDQLKCEGVFTHFSTADSKDPAYFEKQ 184

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ++F  L+   K     +   +S+  L  PN+   L R GIS+YG       I+++  ++
Sbjct: 185 SQKFDELVGVLKKKPKYIHQANSATALWHPNFEGNLVRMGISMYGLNPSGDVIDETWNLE 244

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ E+ ++ +++  AG  + YG     ++   I    IGYADG+   + G        
Sbjct: 245 PALSLESELVAVKEVEAGSSIGYGATYTSSQSEWIGTVPIGYADGWLRRMQGF------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                K  I G    I+G++ MD  M  +     +  G  + + G +    I   DVA  
Sbjct: 298 -----KVLIDGQYCEIVGRVCMDQFMVRLPKKYDL--GTKVTLIGENNGKVITAQDVANY 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T +Y+++  I  R  + Y
Sbjct: 351 ADTIHYEIMCNITERVPRIY 370


>gi|90961338|ref|YP_535254.1| alanine racemase [Lactobacillus salivarius UCC118]
 gi|122449330|sp|Q1WV14|ALR_LACS1 RecName: Full=Alanine racemase
 gi|90820532|gb|ABD99171.1| Alanine racemase [Lactobacillus salivarius UCC118]
          Length = 371

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 158/380 (41%), Gaps = 27/380 (7%)

Query: 3   SNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   R  I L A+K+N    ++ L       AVVK NAYG G   +A A   AG   F 
Sbjct: 5   RHRNTRAIISLEAIKHNVATQISKLKDGQSLFAVVKANAYGHGMIPVAKAAKEAGANGFC 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV- 120
           V  ++EG+ LR    +  I +L      +   +   +L   + ++  LT   KL+     
Sbjct: 65  VAIIDEGIALRESGIKDPILILGVNPASEAVCMAKHDLSVAVGTLEFLTEAQKLLQEEKQ 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
                L +DTG  R+G    E L    +   K   QL      +H + AD         Q
Sbjct: 125 RLKIHLALDTGMGRIGFRNTEDLKEAVDFIEKHSDQLKCEGVFTHFSTADSKDPAYFEKQ 184

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ++F  L+   K     +   +S+  L  PN+   L R GIS+YG       I+++  ++
Sbjct: 185 SQKFDELVGVLKKKPKYIHQANSATALWHPNFEGNLVRMGISMYGLNPSGDMIDETWNLE 244

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++ E+ ++ +++  AG  + YG     ++   I    IGYADG+   + G        
Sbjct: 245 PALSLESELVAVKEVEAGSSIGYGATYTSSQSEWIGTVPIGYADGWLRRMQGF------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                K  I G    I+G++ MD  M  +     +  G  + + G +    I   DVA  
Sbjct: 298 -----KVLIDGQYCEIVGRVCMDQFMVRLPKKYDL--GTKVTLIGENNGKVITAQDVANY 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T +Y+++  I  R  + Y
Sbjct: 351 ADTIHYEIMCNITERVPRIY 370


>gi|256157422|ref|ZP_05455340.1| Alr, alanine racemase [Brucella ceti M490/95/1]
 gi|256253600|ref|ZP_05459136.1| Alr, alanine racemase [Brucella ceti B1/94]
 gi|261220737|ref|ZP_05935018.1| alanine racemase [Brucella ceti B1/94]
 gi|265995910|ref|ZP_06108467.1| alanine racemase [Brucella ceti M490/95/1]
 gi|260919321|gb|EEX85974.1| alanine racemase [Brucella ceti B1/94]
 gi|262550207|gb|EEZ06368.1| alanine racemase [Brucella ceti M490/95/1]
          Length = 399

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 132/378 (34%), Positives = 194/378 (51%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  AR+I +R    G  V YGG         IA  A+GYA G   +LS         
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYAAGLFRSLSN-------- 312

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASG 351
               G  F     +PI+G+++MD    D+T      +++G  +++ GP  +L+DVA    
Sbjct: 313 ---KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCD 369

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  +G RYA+ Y
Sbjct: 370 TIPYEILTALGNRYARVY 387


>gi|269926050|ref|YP_003322673.1| alanine racemase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789710|gb|ACZ41851.1| alanine racemase [Thermobaculum terrenum ATCC BAA-798]
          Length = 376

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 21/374 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +++DL A+++N          ++  AVVK +AYG G  +I+  + +AG     V  V
Sbjct: 12  PTWVEVDLNAIRHNLRLYLDKCPGSKVIAVVKGDAYGHGIIEISKTVLDAGAWGLGVARV 71

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPY 124
            EG+ LR     A I VL      + K    ++L   +S+        +     G     
Sbjct: 72  SEGLLLRSSGIDAPIIVLGYSSEQEIKQAVASDLAISVSTEKMLDWILATAREVGRIPRI 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG  RLG+  ++A    H         L  I +H A ADDP   +   QL  F+ 
Sbjct: 132 HLEVDTGMRRLGVKFEDAAQIVHYIHGTNSVYLEGIFTHFASADDPEGFLFKRQLSMFQD 191

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           LI               A+S+  L  P  HF   R GI LYG      K++P++  +   
Sbjct: 192 LIHLIRERGEVPPIVHAANSAAALYAPESHFDAVRIGIGLYGVQPLQFKTYPLRPAMALR 251

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  +    AGE VSYG           AV   GYADGYP  LS             G+
Sbjct: 252 SVVARVLDVHAGEGVSYGHTYVAKESHRAAVIPCGYADGYPRILSN-----------KGE 300

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             + G   P++G++ MD  +  + + +   VGD + + G      +    +A  +GT  Y
Sbjct: 301 VIVSGIRCPVIGRVCMDNLIVKLPEGVDARVGDAVTLIGSQGSEAVDAGYLARLAGTIPY 360

Query: 356 DLLVRIGTRYAKFY 369
           ++L  IG R  K Y
Sbjct: 361 EILCGIGRRPEKIY 374


>gi|295095419|emb|CBK84509.1| alanine racemase [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 105/368 (28%), Positives = 166/368 (45%), Gaps = 19/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     +           +
Sbjct: 62  EALRLRAGGITQPILLLEGFFEASDLPTIADQHLHTAVHNEEQLAALETAELSEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  + A  F    S  K + Q   I+SH A AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPESAEAFYQRLSQCKNVRQPVNIVSHFARADEPECGATEQQLDIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEAR 241
                G+  S+A+S GILL P  HF   RPGI LYG +   NK        + V++  ++
Sbjct: 182 CEGKPGMR-SIAASGGILLWPQSHFDWARPGIILYGVSPLENKPWGPDFGFKPVMSLVSK 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG      D+ + V A+GY DGYP                G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWTSEHDTRLGVVAMGYGDGYPRAA-----------PTGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  V I+G++ MDM   D+      + GD   ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 290 VNGREVKIVGRVAMDMICVDLGPDAQDKAGDDAVMWGEGLPVERIAEITKVSAYELITRL 349

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 350 TSRVAMKY 357


>gi|300724710|ref|YP_003714035.1| alanine racemase [Xenorhabdus nematophila ATCC 19061]
 gi|297631252|emb|CBJ91947.1| alanine racemase 1, PLP-binding, biosynthetic [Xenorhabdus
           nematophila ATCC 19061]
          Length = 359

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 173/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               I+  AL++N   + A + +++  AVVK NAYG G  + A  + +     F V  + 
Sbjct: 4   ATAVINRRALRHNLQQVRAQAPDSKVIAVVKANAYGHGLLETACTMED--ADCFGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N I  +    +     +           +
Sbjct: 62  EALALRSGGLVKPILLLEGFFEAADLPVLVVNHIDTVVHSIEQLEALEQADLSHPIKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+ + EA  F           Q   +ISH + AD+P+      Q+ERF   
Sbjct: 122 KLDTGMHRLGVRIDEAEAFYQRLSCCHNVEQPINLISHFSRADEPAVETTQQQIERFMAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
           ++   G E S+A+S G+LL    H    RPGI +YG +  ++K      +   +T ++ +
Sbjct: 182 VADKSG-EKSIAASGGVLLWLQAHLDWVRPGIMMYGVSPMVDKTAADFNLIPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK   GE V YGG     RD+ + V A+GY DGYP +              G   FI
Sbjct: 241 IAVRKHKVGESVGYGGTWSSERDTCLGVVAMGYGDGYPRSA-----------PTGMPVFI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
               VPI+G+++MDM   D+  +   +VGD + ++G  + ++ +A  SG + Y+L+ ++ 
Sbjct: 290 NDREVPIVGRVSMDMITVDLGPACQDKVGDEVILWGSALPVEKIAEHSGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|206889591|ref|YP_002248188.1| alanine racemase [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|259710075|sp|B5YIM9|ALR_THEYD RecName: Full=Alanine racemase
 gi|206741529|gb|ACI20586.1| alanine racemase [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 363

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 105/378 (27%), Positives = 172/378 (45%), Gaps = 34/378 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA----RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + FL+ +I+L +L +N+  + A   N     +  A+VK +AYG G  ++A      GV  
Sbjct: 2   SRFLQAEINLKSLIHNFSKIKAHLRNTRVSCKIIAIVKADAYGHGAVEVARVFGLLGVDY 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V   EE + LR    +  I VL      + + +F  NLIPVI    Q  F SK     
Sbjct: 62  LGVAFSEEAIVLREAGIKVPIIVL---FDREIEGVFKYNLIPVIFDYRQAEFLSKEASRR 118

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           GV  P  ++V+TG  RLG+  +   +           ++  ++SH + A+D        Q
Sbjct: 119 GVILPVHIKVETGMGRLGIY-ENPCETIKKIAQLDNLKIDGVMSHFSRAEDL--EWTQEQ 175

Query: 179 LERFRTLISHYKGI---EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
           +++F  +      +        ++S  L      F   RPG+ LYG   +          
Sbjct: 176 MKKFSKIREFLHNLGMKPLFHIANSQGLNYKEALFDAVRPGLMLYGYGAE-----GFIPC 230

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T + +++ IRK   G  +SYGG     +DSLI V  +GYADGY  +LS           
Sbjct: 231 MTVKTKLLDIRKLPKGTPISYGGTFVTKKDSLIGVIPVGYADGYFRSLSN---------- 280

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              +  ++G  VP++G + MD+TM D+TD   +++ D + + G     +I    +A  +G
Sbjct: 281 -KAEVIVRGKRVPVVGTVCMDLTMIDLTDIQEVQIDDEVILLGKTGSEEITASHIAQWAG 339

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L   G R  + Y
Sbjct: 340 TIPYEVLTSFGGRARRKY 357


>gi|118588136|ref|ZP_01545546.1| alanine racemase [Stappia aggregata IAM 12614]
 gi|118439758|gb|EAV46389.1| alanine racemase [Stappia aggregata IAM 12614]
          Length = 380

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 136/366 (37%), Positives = 199/366 (54%), Gaps = 10/366 (2%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           RL IDL A+ +NW  +    G     AAV+K +AYG G +K A ALY AG + FFV    
Sbjct: 17  RLTIDLDAIVSNWSLLKDKVGGGTDCAAVLKADAYGTGQDKTAAALYQAGCRTFFVAVPT 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR   P A I+VL G+ PG  +     ++ PV+ S+ + + +         S P A
Sbjct: 77  EALTLRASLPDAVIYVLDGLFPGTAEHFLKHDIRPVLGSLEELVEWSEICRGASKSFPAA 136

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + V+TG +RLGL+ +E      ++      Q SL++SHLAC  +P   +N  QL+ F   
Sbjct: 137 VHVNTGIHRLGLTPEEFTQALSDTAALGPFQPSLVMSHLACGSNPDHPMNRRQLKLFTET 196

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + +  I  SLA+S+G+LLGP YHF + RPGI+LYGG     + +PM+ V   EARI+++
Sbjct: 197 TAPFPLIPRSLANSAGVLLGPEYHFDVVRPGIALYGGLAIETEPNPMKPVAKVEARIMMV 256

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G+ + YG ++  TR    AV A GYADG        D         GG G I GY
Sbjct: 257 RDVPKGDTIGYGAKQTATRPLRNAVVAAGYADGMIRRAGSTDER------PGGFGTIGGY 310

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
             PILG+I+MDM   D+TD     +  G ++++ GP +   D+A  + T +Y+ L  +G 
Sbjct: 311 KAPILGRISMDMITLDVTDVPDHLLRRGAFVEMLGPGVAASDLAAYAETIDYEYLTSLGR 370

Query: 364 RYAKFY 369
           R+ + Y
Sbjct: 371 RFERVY 376


>gi|284051398|ref|ZP_06381608.1| alanine racemase [Arthrospira platensis str. Paraca]
 gi|291568246|dbj|BAI90518.1| alanine racemase [Arthrospira platensis NIES-39]
          Length = 399

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 168/384 (43%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +++D  A+ NN   +  L S   R  AV+K +AYG G   +A  +   GV DF V 
Sbjct: 24  HRAWVEVDRWAIANNVKQIRHLLSPETRFMAVIKADAYGHGAVSVAKIVSEIGVDDFAVA 83

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
           ++ EG++LR    Q  I VL  +H   E        +      P         L S   S
Sbjct: 84  TIPEGMELRRLGIQQPILVLGAVHTADEIKAIAHWGLQPTLCTPTQALLFSETLQSIQRS 143

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  L +DTG +RLG   ++AL+F          ++S I SH A AD     +   Q  R
Sbjct: 144 LPVQLNIDTGMSRLGTWWEQALEFVQLVRGLPNLEISGIYSHFATADIRDRTIMDQQHWR 203

Query: 182 FRTLISHYK-----------GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
           F+ +++  +                LA+S+  L     H+ + R G+SLYG     +   
Sbjct: 204 FQQVLAQIQEHTSLLSVPTIKPCLHLANSAATLTDRALHYDMVRVGLSLYGLYPAPHLRS 263

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +Q  ++  ARI  I+   AG  VSYG +    + + IAV  IGYADG P  LS    
Sbjct: 264 VINLQPAMSIRARITQIKTIEAGCGVSYGYKFIAKQRTPIAVVGIGYADGVPRQLSNCM- 322

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                     K  I+G  VP +G ITMD  M D+T    ++VG+ + + G D    I  D
Sbjct: 323 ----------KVLIRGQFVPQIGAITMDQLMLDVTAIPDLQVGEVVTLLGSDRHHSISAD 372

Query: 345 DVALASGTTNYDLLVRIGTRYAKF 368
           D A   GT ++++L     R  + 
Sbjct: 373 DWAQQLGTISWEILCGFKHRLPRI 396


>gi|51246605|ref|YP_066489.1| alanine racemase [Desulfotalea psychrophila LSv54]
 gi|50877642|emb|CAG37482.1| related to alanine racemase [Desulfotalea psychrophila LSv54]
          Length = 373

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 24/382 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N F  + +  +AL+ N+ +M   +    +  A+VK +AYG G  ++A AL +     
Sbjct: 1   MKRNSFNNVTVCRSALRKNFKTMQDKMGQGGKLMAMVKADAYGHGAVEVAKALQDVACSS 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSC 118
           F V  + E V LR       IFV+ G       ++FD  L PV+     +   S   +  
Sbjct: 61  FGVAEIREAVLLRDAGITGDIFVMLGFDLDAVGLMFDYRLTPVVHCYEDIVALSVEGVKR 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G      ++VDTG  RLG   ++ L   HN        ++ ++SH   AD  +S  +   
Sbjct: 121 GYEIGCHIKVDTGMRRLGFEPEQVLGVAHNISRLSGVFVAGMLSHFPEADVVNSPSSRDG 180

Query: 179 LERFRT---LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHP 231
           + RF +   ++         LA+S G+L  P   F + R GIS+YG       +   + P
Sbjct: 181 IRRFASLDVVLKSEFSTVCHLANSGGVLNFPESLFDMGRSGISIYGYHPAGAIEGGGTSP 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               ++  +RI+ ++K  AG  VSYG      R +L+AV   GY DGY  +LS       
Sbjct: 241 FIPAMSFRSRILQVKKVAAGTGVSYGHSYITKRPTLLAVLPTGYEDGYRRSLSN------ 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  I+G   P+ G+I M+  + D+TD  ++  GD + + G      I  DD+A
Sbjct: 295 -----KAEVLIRGQRAPVRGQICMNACVVDVTDIENVTAGDEVVLLGEQGNERITADDIA 349

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             + T +Y++L  +G    + Y
Sbjct: 350 EWADTISYEILCMLGHTNNRLY 371


>gi|20137243|sp|Q9PF26|ALR_XYLFA RecName: Full=Alanine racemase
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 165/369 (44%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F V  
Sbjct: 2   RPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L G    +E  +   + +  + +                   
Sbjct: 60  IEEALELRQAGIQAPILLLEGFFEAEELELIAKHNLWTVIASSWQVRALAAFHSPSPIGV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL  +E  D   +          ++++HLA AD+  +   + Q   F  
Sbjct: 120 WLKLDSGMHRLGLEPKEFRDAWMSLHRLPQVGEIVLMTHLARADELDNPRTNEQASVFAQ 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
                    AS+ +SSG+L     +    RPG+ LYG      +S     P++ V+   +
Sbjct: 180 ASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPIPQESTSLSGPLRPVMMVYS 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I + +  AGE V YG      R + + V A+GYADGYP                G   
Sbjct: 239 RLIAVHELPAGEPVGYGACFVTERPTRVGVVAMGYADGYPYFAVN-----------GTPL 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y LL  
Sbjct: 288 LVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQLLCG 347

Query: 361 IGTRYAKFY 369
           +  R  ++Y
Sbjct: 348 L-KRVRRYY 355


>gi|219871770|ref|YP_002476145.1| alanine racemase [Haemophilus parasuis SH0165]
 gi|219691974|gb|ACL33197.1| alanine racemase [Haemophilus parasuis SH0165]
          Length = 378

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 173/380 (45%), Gaps = 32/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I+ +AL++N   + +L+ +++  AVVK NAYG G   +   L +  V+ F V  
Sbjct: 2   KPATATINGSALRHNMRLIKSLAPHSKICAVVKANAYGQGIRAVIKNLEDQ-VEAFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           ++E + ++      +I +L G     +           VI  + QL     +        
Sbjct: 61  IKEALTIQESGYAGKILLLEGFFDREELLKTLSRRFDTVIHCLEQLELLENVAQEWQAEK 120

Query: 121 -------------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
                             L++DTG +RLG+  ++  +F        L +    +SH + A
Sbjct: 121 QKGFWQRKTKIYFPITVWLKIDTGMHRLGIHPEQVAEFYQRLTACPLVECIHFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+        Q+  F T +S    +E S+++SSGIL     H+   RPGI +YG +    
Sbjct: 181 DELDCDYTEKQIATFET-VSQEYKVERSISASSGILYWKQAHYDWVRPGIIMYGISPHST 239

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ I V AIGY DGYP     
Sbjct: 240 PIVDLGFKPVMTLSSSLIAVRSHKAGEPVGYGGSWVSDKDTKIGVVAIGYGDGYPRNA-- 297

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G   F+ G  VPI+G+++MDM   D+      +VGD ++++G  + +++
Sbjct: 298 ---------PEGTPVFVNGRKVPIVGRVSMDMMTVDLGIDSQDKVGDEVELWGERLLIEE 348

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA A G+ NY+L+ ++  R 
Sbjct: 349 VAEAIGSINYELITKLTPRV 368


>gi|16078827|ref|NP_389646.1| alanine racemase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309646|ref|ZP_03591493.1| hypothetical protein Bsubs1_09706 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313968|ref|ZP_03595773.1| hypothetical protein BsubsN3_09647 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318891|ref|ZP_03600185.1| hypothetical protein BsubsJ_09566 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323164|ref|ZP_03604458.1| hypothetical protein BsubsS_09682 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|3913040|sp|P94494|ALR2_BACSU RecName: Full=Alanine racemase 2
 gi|1750128|gb|AAB41097.1| YncD [Bacillus subtilis]
 gi|2634148|emb|CAB13648.1| alanine racemase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 394

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++     + ++  AVVK N YG G  ++A      G  +  V 
Sbjct: 6   REVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           SVEEG+ LR     A I VL        K     N+      V  +   ++++    S  
Sbjct: 66  SVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEASAN 125

Query: 124 Y---ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+   +E L+        K  + + I +H + AD+P + +  +Q 
Sbjct: 126 RLAIHINVDTGMGRLGVRTKEELLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQH 185

Query: 180 ERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           E+F + +S    +GIE     + +++  +  P +   + R GI LYG             
Sbjct: 186 EKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLV 245

Query: 231 PMQTVVTAEARIILIRKAL-AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            ++  ++ +ARI  ++        VSYG       + +IA   IGYADGY   LS     
Sbjct: 246 KLEPALSLKARIAYVKTMRTEPRTVSYGATYIAEPNEVIATLPIGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + ++   + GD + I+G     +I +D+
Sbjct: 303 --------GFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAEISVDE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY+++  +  R  +FY
Sbjct: 355 VAEMLNTINYEVVSTLSRRIPRFY 378


>gi|120555293|ref|YP_959644.1| alanine racemase [Marinobacter aquaeolei VT8]
 gi|166969416|sp|A1U388|ALR_MARAV RecName: Full=Alanine racemase
 gi|120325142|gb|ABM19457.1| alanine racemase [Marinobacter aquaeolei VT8]
          Length = 357

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 168/368 (45%), Gaps = 19/368 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +IDL ALK+N+     L+G A   AVVK + YG G   +A AL       F V  
Sbjct: 3   RPTVARIDLDALKHNFRRARELAGTAYAMAVVKADGYGHGIRSVADALAPE-TSRFAVAC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + +R    +  + +L G H   +    + +    +    Q   +   +  G S  +
Sbjct: 62  IEEAIAIRGAGHRHSVVLLQGTHQKDDLAECERSGFEPVLHCQQQLSW---LGAGRSPRF 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ-LSLIISHLACADDPSSHVNSVQLERFR 183
            ++V+TG NRLG   +E  +         L       ++H ACADD  S +  +Q   F 
Sbjct: 119 WIKVNTGMNRLGFRPEELPEVMAGLEEAGLKHLAIGFVTHFACADDSDSEMTGLQTRIFE 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEA 240
             ++ +  +  S+ +S+         ++ +RPGI LYG +    K      +   +T +A
Sbjct: 179 RAVAPWPDLMRSVGNSAAHFRPNQPLYEWSRPGIMLYGASPMEGKTGAELGLCPAMTLQA 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I  R   AGE V YG     ++D+ + + AIGYADGYP                G   
Sbjct: 239 PLITTRVVRAGESVGYGASWTASQDTRMGMVAIGYADGYPRHAG-----------TGTPA 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            ++G  + +LG+++MDM   D++       GD ++++G  + +D+VA  +GT  Y+LL  
Sbjct: 288 AVRGQRIRLLGRVSMDMLAVDLSAVPEAREGDMVELWGKTVSVDEVATCAGTIGYELLTG 347

Query: 361 IGTRYAKF 368
           + +R  + 
Sbjct: 348 VTSRVPRV 355


>gi|307546199|ref|YP_003898678.1| alanine racemase [Halomonas elongata DSM 2581]
 gi|307218223|emb|CBV43493.1| alanine racemase [Halomonas elongata DSM 2581]
          Length = 366

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 153/374 (40%), Gaps = 22/374 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             LR  IDL AL +N+     L+  +R+ AV+K +AYG G    A AL       F V  
Sbjct: 3   RPLRADIDLDALCHNYRLARDLAPTSRSLAVLKADAYGHGLVPCARAL-EGLAPAFAVAC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   LR     A I +L GI    E    +   +  +                   P 
Sbjct: 62  LEEAEALREGGITAPIVLLEGIFSADELARVEALKLGTVVHSDWQVEALLSHRPAEPIPT 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERFR 183
            ++VD+G +RLG + + A                  ++SH A AD   +     Q  R  
Sbjct: 122 WVKVDSGMHRLGFAPERAASVWARLSAAPAQACDLHLMSHFATADHADTAYFEHQ-MRTL 180

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEA 240
             ++        LA+S   L  P  H    RPG+ LYG        + S  ++ V+T  +
Sbjct: 181 NALAETLNAPTCLANSPATLARPESHGAWNRPGVMLYGSDPLEASNSASRELEPVMTLRS 240

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R    GE V YGG+ +  R S I V A GY DGY                 G   
Sbjct: 241 QLIAVRDLDEGEPVGYGGRWRAPRPSRIGVVACGYGDGYDRHA-----------IDGTPA 289

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNY 355
            + G    ++GK++MDM   D+TD    ++G  + ++G       + +D+VA    T +Y
Sbjct: 290 LVAGRRTTLVGKVSMDMLTVDLTDIPEADIGSEVVLWGRAANGEVLSVDEVARHCDTISY 349

Query: 356 DLLVRIGTRYAKFY 369
            LL  +  R  + Y
Sbjct: 350 TLLTGVLPRVPRRY 363


>gi|37528186|ref|NP_931531.1| alanine racemase [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36787623|emb|CAE16730.1| alanine racemase, biosynthetic [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 359

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 170/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +   AVVK NAYG G  + A  L +     F V  + 
Sbjct: 4   ATAVIDRRALRHNLQRVREIAPKSNLIAVVKANAYGHGLLETAHTLDD--ADCFGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     + ++   N I  +    +     +           +
Sbjct: 62  EALTLRHGGIVKPILLLEGCFDAADLLVLVANHIETVVHSVEQLQALEQAKLSHPVKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++D+G +RLG+  ++A +F    S  K + Q   I+SH   AD+P+      Q+  F+  
Sbjct: 122 KLDSGMHRLGVRPEDAEEFYQRLSRCKNVQQPVNIVSHFGRADEPTVDTTCQQIACFQAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G E S+ +S GILL P  H    RPG+ +YG +   +K      +   +T ++ +
Sbjct: 182 CADKPG-EKSIDASGGILLWPEVHQDWVRPGLMMYGVSPLSDKTAVDFNLIPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  AGE V YGG     RD+ + V AIGY DGYP +              G    I
Sbjct: 241 IAVRKHKAGESVGYGGIWVSERDTYLGVVAIGYGDGYPRSA-----------PSGTPIHI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+    + +VGD + ++G  + ++ VA  +G   Y+L+ ++ 
Sbjct: 290 NGREVPIAGRVSMDMISVDLGPEATDKVGDEVVLWGDVLPVERVAKHTGIITYELVTKLT 349

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 350 SRVVMEY 356


>gi|255038732|ref|YP_003089353.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Dyadobacter fermentans DSM
           18053]
 gi|254951488|gb|ACT96188.1| alanine racemase [Dyadobacter fermentans DSM 18053]
          Length = 824

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 160/371 (43%), Gaps = 21/371 (5%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +   A +G   +  A+VK  AYG G  ++A  L    V    V   +E
Sbjct: 462 LEINLDALVHNLNYYRARAGQGTKIMAMVKAFAYGSGSSEVAALLQYHRVDYLGVAYTDE 521

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY--- 124
           GV LR       I V+    P  + +        + S      +   +   G        
Sbjct: 522 GVMLRQSGITLPIMVMNATLPTFDLLWQYKLEPEIYSRRILTDWIEYITRKGEPTNTPSV 581

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            L++DTG +RLG    +              +++ + SHL  AD+   +  +  Q  +F 
Sbjct: 582 HLKLDTGMHRLGFVKDDYEWLVEQLRQNPALKVATLFSHLVGADEGVHNEFSRKQYAQFM 641

Query: 184 TLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                            + +S+GI+  P Y   + R GI LYG          +Q+V T 
Sbjct: 642 EGAELIEATLGYKTIKHILNSAGIVRFPEYRLDMVRLGIGLYGVEATGQDQRALQSVGTL 701

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  +  ++   +GE V Y  +  +  DS IA  AIGYADGY   L              G
Sbjct: 702 KTIVSQVKYLSSGETVGYSRKGVVDHDSAIATLAIGYADGYDRGLGNGV----------G 751

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           K ++ G + P +G I MDMTM D+T++  +E GD + +FG ++ + ++A    T  Y++L
Sbjct: 752 KVWVNGTLCPTIGNICMDMTMIDVTNA-QVEEGDEVIVFGKEVPITELAKTINTIPYEIL 810

Query: 359 VRIGTRYAKFY 369
             IG R  + +
Sbjct: 811 TGIGDRVKRVF 821


>gi|187779670|ref|ZP_02996143.1| hypothetical protein CLOSPO_03266 [Clostridium sporogenes ATCC
           15579]
 gi|187773295|gb|EDU37097.1| hypothetical protein CLOSPO_03266 [Clostridium sporogenes ATCC
           15579]
          Length = 397

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 27/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 11  RNHRPVWEEVNLDNLSYNMKNIKNKVKCKEIFAVVKANGYGHGAVDIASTLLENGATRLS 70

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
           V  + E ++LR       I +L        + I + N+ PV+ S       SK       
Sbjct: 71  VACLSEAIELREGGITCPINILGITPSTLFEDIINYNIEPVVFSYDYAYQLSKAACQKNR 130

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+    E+L+      N    ++  + SH + +D+     +  Q 
Sbjct: 131 IVKTHIAVDTGMGRLGVDPTVESLEEIKKIQNLSNIKIEGLCSHFSSSDEKDKSYSEYQF 190

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           +RF+        +        +A+S+ I+  PN +    R GI LYG    +    ++  
Sbjct: 191 KRFQHFRKKLIEMNIKIPIHHMANSAAIIDLPNTYLDGVRAGIILYGYYPSMEVNKENLH 250

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T +A I+ I+   +G+ V Y  + K  R S +A+  +GY DGY   LS       
Sbjct: 251 IKQVMTLKANIVHIKTIDSGKYVGYNRKFKTKRKSRVAILPLGYGDGYTRFLSNR----- 305

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDD 345
                 GK  I G   PI+G I MD  M D+TD   ++VGD   I G D         +D
Sbjct: 306 ------GKVIINGQYAPIIGNICMDQCMIDVTDIKEVKVGDEAIIIGKDYINNLKYDAED 359

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           ++   G T+ +++  I  R  + Y
Sbjct: 360 ISSQVGMTSGEIMSIISKRVPRVY 383


>gi|290476881|ref|YP_003469792.1| alanine racemase 1, PLP-binding, biosynthetic [Xenorhabdus bovienii
           SS-2004]
 gi|289176225|emb|CBJ83030.1| alanine racemase 1, PLP-binding, biosynthetic [Xenorhabdus bovienii
           SS-2004]
          Length = 359

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +   + +++  AVVK NAYG G  ++A  + +     F V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRVKAPDSKLVAVVKANAYGHGFLEVAYTMED--ADSFGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N I  +    +     +  +        +
Sbjct: 62  EALALRNGGIVKPILLLEGFFEAADLPVLVVNHIETVVHSIEQLEALEQANLSHPIKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+ + EA +F           Q   I+SH + AD+ +      Q++RF   
Sbjct: 122 KLDTGMHRLGVRIDEAEEFYQRLSCCHNVEQPVNIVSHFSRADELTVDTTPQQIDRFMAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
           I+   G E S+A+S GILL P  H    RPGI +YG +   +K      +   +T ++ +
Sbjct: 182 IADKSG-EKSIAASGGILLWPQAHLDWVRPGIMMYGASPIADKTAADFNLIPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  + E V YGG     RD+ + V A+GY DGYP +              G    I
Sbjct: 241 IAVRKHKSDESVGYGGTWISERDTTLGVVAVGYGDGYPRSA-----------PSGTPVLI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VP++G+++MDM   D+      +VGD + ++G  + ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGRKVPLVGRVSMDMITVDLGPECYDKVGDEVTLWGNILPVEKIAEHTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 350 SRVVMEY 356


>gi|327403145|ref|YP_004343983.1| Alanine racemase [Fluviicola taffensis DSM 16823]
 gi|327318653|gb|AEA43145.1| Alanine racemase [Fluviicola taffensis DSM 16823]
          Length = 762

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 177/371 (47%), Gaps = 21/371 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++I+L+A+K+N     +      +  A+VK ++YG G +K+AP L  +G+++F V   +E
Sbjct: 400 VEINLSAIKHNVSFYQSRIPKEVKILAMVKASSYGSGADKVAPFLQQSGIRNFGVAFADE 459

Query: 68  GVKLRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--SHPY 124
           GV+LR          V+    P    +I +  L P I S  QL  +   +      ++P 
Sbjct: 460 GVELRKAGIGISSSIVVMNPDPEHSDLIIEYRLEPAIYSFEQLDEFITALIHKQISAYPI 519

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFR 183
            L+ DTG +RLG +  +         ++   ++  I SHLA AD+P        QL  F 
Sbjct: 520 HLKFDTGMHRLGFAPSDKERILAIINSQPEVKIQGIYSHLADADNPIHSEFTQKQLTSFE 579

Query: 184 TLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           +++S+++        A + +S G L  P   + + R GIS+YG T+       +Q  V+ 
Sbjct: 580 SIVSYFRTNSSDSFLAHILNSEGSLRYPESCYDMIRLGISMYGYTENNQLKASLQGSVSW 639

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  I+    G+ + YG   +   D  IA+  +GYADG+  +LS             G
Sbjct: 640 YSSISQIKAVPKGDFIGYGISYQAIEDMTIAIIPVGYADGFRRSLSNG----------KG 689

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
             FI G   P++G++ MDM M DI+     ++ D ++I G +  ++  A +  T  Y+++
Sbjct: 690 SVFIHGIKCPVVGRVCMDMIMVDISSV-DAKINDSVEIIGQNQPMEVFAKSMETIPYEVM 748

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 749 TGLSKRMHRVY 759


>gi|167855746|ref|ZP_02478501.1| alanine racemase [Haemophilus parasuis 29755]
 gi|167853143|gb|EDS24402.1| alanine racemase [Haemophilus parasuis 29755]
          Length = 378

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 173/380 (45%), Gaps = 32/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I+ +AL++N   + +L+ +++  AVVK NAYG G   +   L +  V+ F V  
Sbjct: 2   KPATATINGSALRHNMRLIKSLAPHSKICAVVKANAYGQGIRAVIKNLEDQ-VEAFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           ++E + ++      +I +L G     +           VI  + QL     +        
Sbjct: 61  IKEALTIQESGYAGKILLLEGFFDREELLKTLSRRFDTVIHCLEQLELLENVAQEWQAEK 120

Query: 121 -------------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
                             L++DTG +RLG+  ++  +F        L +    +SH + A
Sbjct: 121 QKGFWQRKTKIYFPITVWLKIDTGMHRLGIHPEQVAEFYQRLTACPLVECIHFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           D+        Q+  F T +S    +E S+++SSGIL     H+   RPGI +YG +    
Sbjct: 181 DELDCDYTEKQIATFET-VSQEYKVERSISASSGILYWKQAHYDWVRPGIIMYGISPHTT 239

Query: 228 K--SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ I V AIGY DGYP     
Sbjct: 240 PIIDLGFKPVMTLSSSLIAVRSHKAGEPVGYGGSWVSDKDTKIGVVAIGYGDGYPRNA-- 297

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G   F+ G  VPI+G+++MDM   D+      +VGD ++++G  + +++
Sbjct: 298 ---------PEGTPVFVNGRKVPIVGRVSMDMMTVDLGIDSQDKVGDEVELWGERLLIEE 348

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA A G+ NY+L+ ++  R 
Sbjct: 349 VAEAIGSINYELITKLTPRV 368


>gi|30249388|ref|NP_841458.1| alanine racemase [Nitrosomonas europaea ATCC 19718]
 gi|81838719|sp|Q82UR4|ALR_NITEU RecName: Full=Alanine racemase
 gi|30138751|emb|CAD85328.1| Alanine racemase [Nitrosomonas europaea ATCC 19718]
          Length = 362

 Score =  283 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 164/368 (44%), Gaps = 20/368 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +R  I+  AL++N   +      AR  AVVK +AYG G  ++A AL    V  F V 
Sbjct: 2   SRPIRAFINCAALRHNLAVVRRHVHQARIMAVVKADAYGHGLLRVARALDA--VDGFAVL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +E  ++LR       I +L G     + + I    L  VI    QL+        G   
Sbjct: 60  ELEAAIQLREAGFSQLILLLEGFFSIEEIEAINHYRLSTVIHCHEQLSMLLAHKKTGKPD 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLER 181
            + L+++TG NRLG   +E     +            +++H ACADD         QL  
Sbjct: 120 IF-LKINTGMNRLGFRPEEGNSVLNRLRQWHTDISITLMTHFACADDLLEADHVDQQLGS 178

Query: 182 FRTLISHYKG-IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
           F  L    +G I  +LA+S+ IL  P  H    RPGI LYG +   +K      +Q V+T
Sbjct: 179 FARLEEKREGCIPRTLANSAAILRYPGTHADWVRPGIILYGASPLPDKTGIELGLQPVMT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +RII ++     + + YGGQ    +   + V A GYADGYP                G
Sbjct: 239 LTSRIIAVQHLDFSDRLGYGGQFVADQPMRVGVVAAGYADGYPRHA-----------PTG 287

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               + G    ++G+++MDM   D++       G  + ++G  + +++VA ++ T +Y+L
Sbjct: 288 TPVLVNGRRTRLIGRVSMDMLTVDLSGINEAGAGSLVTLWGEGLPVEEVARSAQTISYEL 347

Query: 358 LVRIGTRY 365
           L  +  R 
Sbjct: 348 LAALSPRV 355


>gi|291484362|dbj|BAI85437.1| hypothetical protein BSNT_02911 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 395

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 101/384 (26%), Positives = 172/384 (44%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++     + ++  AVVK N YG G  ++A      G  +  V 
Sbjct: 7   REVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           SVEEG+ LR     A I VL        K     N+      V  +   ++++    S  
Sbjct: 67  SVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEASAN 126

Query: 124 Y---ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+   +E L+        K  + + I +H + AD+P + +  +Q 
Sbjct: 127 RLAIHINVDTGMGRLGVRTKEELLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQH 186

Query: 180 ERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           E+F + +S    +GIE     + +++  +  P +   + R GI LYG             
Sbjct: 187 EKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLV 246

Query: 231 PMQTVVTAEARIILIRKAL-AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            ++  ++ +ARI  ++        VSYG       + +IA   IGYADGY   LS     
Sbjct: 247 KLEPALSLKARIAYVKTMRTEPRTVSYGATYVAEPNEVIATLPIGYADGYSRALSNR--- 303

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + ++   + GD + I+G     +I +D+
Sbjct: 304 --------GFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAEISVDE 355

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY+++  +  R  +FY
Sbjct: 356 VAEMLNTINYEVVSTLSRRIPRFY 379


>gi|296330975|ref|ZP_06873450.1| alanine racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674493|ref|YP_003866165.1| alanine racemase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151980|gb|EFG92854.1| alanine racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412737|gb|ADM37856.1| alanine racemase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 394

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 102/384 (26%), Positives = 172/384 (44%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++     + ++  AVVK N YG G  ++A      G  +  V 
Sbjct: 6   REVWIEVNLDAIKKNLRAIRRHIPHKSKIMAVVKANGYGHGSVEVARHALEHGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-- 121
           SVEEG+ LR     A I VL        K     N+      V  +   ++++    S  
Sbjct: 66  SVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEASTD 125

Query: 122 -HPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+   +E L         K  + + I +H + AD+  + +  +Q 
Sbjct: 126 RLAIHINVDTGMGRLGVRTKKELLAVVKALKASKSLRWTGIFTHFSTADEADTTLTKLQH 185

Query: 180 ERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           E+F + +S    +GIE     +++++  +  P +   + R GI LYG             
Sbjct: 186 EKFISFLSFLKNQGIELPTVHMSNTAAAIAFPEFSADMIRLGIGLYGLYPSTYIKQLNLV 245

Query: 231 PMQTVVTAEARIILIRKAL-AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            ++  ++ +ARI  ++        +SYG       D +IA   IGYADGY  TLS     
Sbjct: 246 KLEPALSLKARIAYVKTMRTEPRTISYGATYIAEPDEVIATLPIGYADGYSRTLSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + +S   + GD + I+G     +I +D+
Sbjct: 303 --------GFVLHRGKRVPLAGRVTMDMIMVSLGESGEGKQGDEVVIYGQQKGAEISVDE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY+++  +  R  +FY
Sbjct: 355 VAEMLNTINYEVVSTLSRRIPRFY 378


>gi|257438081|ref|ZP_05613836.1| alanine racemase [Faecalibacterium prausnitzii A2-165]
 gi|257199412|gb|EEU97696.1| alanine racemase [Faecalibacterium prausnitzii A2-165]
          Length = 401

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 90/395 (22%), Positives = 160/395 (40%), Gaps = 36/395 (9%)

Query: 1   MHSNEF---LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M    F   +  +IDL AL+ N+ ++   +G+    AVVK ++YG G  + A      G 
Sbjct: 1   MQMQNFEKHVWAEIDLDALRANFRTVKQRAGSLPLCAVVKADSYGHGAVQCARVFAQEGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
               V+ + E ++LR       I +L  + P     +   ++     S+PQ    S+   
Sbjct: 61  SWLAVSCLAEALQLRRSGQTLPILILGHVQPAYAAALIRNDITAACYSLPQAQALSEAAQ 120

Query: 118 -CGVSHPYALQVDTGFNRLGL----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
             G      L VDTG  R+G         A+     +      +++ +  H + ADD + 
Sbjct: 121 AAGGRVKVHLAVDTGMGRIGFALRTDFDAAIAEAIAACTLPGLEMTGLFQHFSVADDTAE 180

Query: 173 H---VNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYH------FQLTRPGIS 218
                 + Q   F         + ++       +S+G++L P++         + RPGI 
Sbjct: 181 ENIAYTAEQHRLFVQACSALTAAGHEPGIVHCDNSAGVMLHPDWPEGLPRAHCMARPGII 240

Query: 219 LYGGTDKINKSHPMQTV-VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           LYG          +    +  +  + +++    G+  SYG +    R + +A    GYAD
Sbjct: 241 LYGFDPSDEVRFGLFRPVMKLKTVVSMVKVLQPGQSTSYGRRFTAERPTPVATLCTGYAD 300

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
           GYP  LS             G   I G   P+LG++ MD  M D++     ++ GD   +
Sbjct: 301 GYPRQLS----------CGKGIVEIHGTPCPVLGRVCMDQMMVDLSAVPGTVQEGDEAIL 350

Query: 337 FGPDI--KLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +G  +    +D+A  + T  Y++L  +  R  + Y
Sbjct: 351 WGGTVSDSAEDIAHKTDTITYEVLCGVSRRVPRVY 385


>gi|299133317|ref|ZP_07026512.1| alanine racemase [Afipia sp. 1NLS2]
 gi|298593454|gb|EFI53654.1| alanine racemase [Afipia sp. 1NLS2]
          Length = 383

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 133/377 (35%), Positives = 205/377 (54%), Gaps = 19/377 (5%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNARTAA-VVKDNAYGLGCEKIAPALYNAG 56
           M  N   R   L +DL A+++N+  + +    +   A VVK + YGLG   ++ AL+  G
Sbjct: 1   MEKNGRFRGGTLAVDLRAVRSNYRLLRSRLRASTLCAGVVKADGYGLGATYVSRALFAEG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            + FFV  ++EG+ LR Y P+ A IF+L G+  G E+      L+PV++S  Q   ++  
Sbjct: 61  CRHFFVAHLDEGLALRPYLPRSAAIFILNGLPRGAERECAAAGLVPVLNSPEQAGAWAGC 120

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
               G   P  LQVD+G NRLGL+  EA  F        +  L  I+SHLACAD P+   
Sbjct: 121 ARTRGQRLPAVLQVDSGMNRLGLTAGEAARFAETPARSGVVDLRYIMSHLACADTPAHEA 180

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           N++QL  FR L   +  +  SLA+SSGI LGP+YHF L RPG +LYG       ++PMQ+
Sbjct: 181 NAMQLATFRQLAGLFPDVPRSLANSSGIFLGPDYHFSLVRPGSALYGVNPDPAATNPMQS 240

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           VV   A++I +R  + G+ V YG   +   ++ +A  ++GYADG+               
Sbjct: 241 VVRLTAKVIQLRNVMPGDCVGYGWDARARGEARLATLSLGYADGFHRAWG---------- 290

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG--DYIQIFGPDIKLDDVALASGT 352
             GG  F +G  +P++G+++MD  + D +      +G    +++ G D  LDD+A  +GT
Sbjct: 291 -KGGAVFFEGLRLPVVGRVSMDSIVIDASAIAPGRLGPDSEVEVIGDDQPLDDLASVAGT 349

Query: 353 TNYDLLVRIGTRYAKFY 369
             Y++L  +G+RY + Y
Sbjct: 350 IGYEVLTGLGSRYQRIY 366


>gi|261409040|ref|YP_003245281.1| alanine racemase [Paenibacillus sp. Y412MC10]
 gi|261285503|gb|ACX67474.1| alanine racemase [Paenibacillus sp. Y412MC10]
          Length = 395

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+L  L+ N+++   AL  + +  A VK NAYG G  ++A  L   G     V 
Sbjct: 6   RPTLAEINLDHLRANYNAFREALPDHMKLLACVKANAYGHGAVEVARELQQLGAAYLSVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSH 122
            ++E ++LR       I VL    P    I ++ +  I + SS       +  +      
Sbjct: 66  FLDEAIELRQGGISVPILVLGYTPPEAVGIAYEYDVTITLFSSEVLQAIKALPVKPEKPL 125

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++D+G  RLGL   ++A+ F   +F+     +  + +H A AD+ +      Q  R
Sbjct: 126 KVHIKIDSGMGRLGLLPGEDAISFIEEAFSLPQVVVEGMFTHFARADEENKDYTLGQYRR 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F+ +    +  +  +      +S+  +  P   + + R GI LYG         K+  ++
Sbjct: 186 FQGVADALRDKDYHIPIIHTGNSAAAIDTPELSYNMVRVGIGLYGLYPSDEVNRKTVSLR 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T + +++ ++       +SYG +    ++  I    IGYADG+   LSG        
Sbjct: 246 PVMTLKTKLVYVKNLPPHSGISYGTKYVTEQEERIGTLPIGYADGFSRMLSG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGPD----IKLDD 345
                +  I+G  VP++G I MD  M  +     ++  I+ G+ + + G      I  D+
Sbjct: 298 ---KAEVLIRGRRVPVVGNICMDQCMVSLKSFAEEAEQIKAGEEVVLIGQQSGECITADE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y+++  I  R  + Y
Sbjct: 355 LAAKLGTIHYEVVCMIAHRVPRLY 378


>gi|28199693|ref|NP_780007.1| alanine racemase [Xylella fastidiosa Temecula1]
 gi|31076596|sp|Q87AK1|ALR_XYLFT RecName: Full=Alanine racemase
 gi|28057814|gb|AAO29656.1| alanine racemase [Xylella fastidiosa Temecula1]
          Length = 365

 Score =  282 bits (722), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 19/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S       IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F
Sbjct: 1   MCSVRPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR    QA I +L G    +E  +   + +  + +               
Sbjct: 59  AVACIEEALELRQAGIQAPILLLEGFFEVEELELIAKHNLWTVIASSWQVRALAAFHSPS 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++D+G +RLGL  +E  D   +  +       ++++HLA AD+  +   + Q  
Sbjct: 119 PIGVWLKLDSGMHRLGLEPKEFRDAWMSLHSLPQVGEVVLMTHLARADELDNPRTNEQAS 178

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVV 236
            F           AS+ +SSG+L     +    RPG+ LYG         + S P++ V+
Sbjct: 179 VFAHASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPISQESTSLSGPLRPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
              +++I +R+  AGE V YG      R + + V A+GYADGYP                
Sbjct: 238 MVYSKLIAVRELPAGEPVGYGASFVTERPTRVGVVAMGYADGYPYFAVN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y 
Sbjct: 287 GTPLLVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQ 346

Query: 357 LLVRIGTRYAKFY 369
           LL  +  R  ++Y
Sbjct: 347 LLCGL-KRVRRYY 358


>gi|237654641|ref|YP_002890955.1| alanine racemase [Thauera sp. MZ1T]
 gi|237625888|gb|ACR02578.1| alanine racemase [Thauera sp. MZ1T]
          Length = 361

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 99/365 (27%), Positives = 165/365 (45%), Gaps = 15/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL+AL++N+       G  R  AVVK NAYG G  + A AL +     F V  
Sbjct: 2   RPARALIDLSALRHNYLLARERHGG-RALAVVKANAYGHGALRCAQALRDE-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E ++LR     A I +L G+    E        + ++    +     +          
Sbjct: 60  LGEALELRAGGIDAPILLLEGVFAADELAEAARQRLWMVVHHEEQLCMLERTPLAAPVDV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NR G                      ++++H A AD+P       QL+RF  
Sbjct: 120 WLKVNSGMNRAGFVGDAVARTWRRLQASGKVGRIVLMTHFARADEPELGTTLEQLQRFEA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             +   G   S+A+S+ IL  P       RPGI LYG      + + ++ V+T E+ ++ 
Sbjct: 180 ATAGLPGAR-SVANSAAILAWPQARRDWARPGILLYGADPMPAEGNGLRAVMTLESAVMA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  +GE + YGG+    R + + + A+GYADGYP             V  G    ++G
Sbjct: 239 VREIASGEALGYGGRFVAERPTRVGLVAMGYADGYPR-----------VVPDGTPVAVEG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   D+T      +G  ++++G  + ++ +A A+GT +Y+LL  +  R
Sbjct: 288 RASRIIGRVSMDMLTIDLTALPEACLGSQVELWGKQVPINHIAQAAGTISYELLCNV-KR 346

Query: 365 YAKFY 369
               Y
Sbjct: 347 VRLEY 351


>gi|225572058|ref|ZP_03780922.1| hypothetical protein RUMHYD_00352 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040493|gb|EEG50739.1| hypothetical protein RUMHYD_00352 [Blautia hydrogenotrophica DSM
           10507]
          Length = 384

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 161/385 (41%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M  N   ++ I L A+  N+  M   L    +  AV+K + YG G   IA  + +   V 
Sbjct: 1   MEKNSRTKVSISLDAIAQNFEEMHRKLPKETKMMAVIKADGYGHGALAIAKTVESYEYVW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F   + +E  +LR       I VL       + ++    + P +         S+    
Sbjct: 61  GFATATAQEAGQLREAGIHKPILVLGYTFQEDDALLVREEIRPTVFQYSTAKRLSQEAAR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    L +DTG  R+G  +Q E++            ++  + +H A AD+      +
Sbjct: 121 QGKTVHIHLALDTGMARIGFPVQKESVREIQKIQKLDFLEIEGLFTHFAKADEADLTYTA 180

Query: 177 VQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            QL ++                   A+S+GI+  P  +  L R GI +YG         +
Sbjct: 181 EQLRQYEQFCQWLSQEGVTVPIRHCANSAGIMCVPRAYLDLVRAGIIMYGIYPSDEVERE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +  +A+I  ++   AG  VSYGG     +++ IA   +GYADGYP +LS    
Sbjct: 241 KLFLRPAMEWKAQIAYVKTVPAGCAVSYGGTYVTEKETKIATIPVGYADGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   + G   PILG++ MD  M D+TD   +   D + + G D    + ++
Sbjct: 298 --------KGWILVHGQKAPILGRVCMDQFMVDVTDIPQVRQHDEVTLIGWDHQAFLSVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A  SG   Y+ +  IG+R  + Y
Sbjct: 350 ELARLSGRFPYEFVCDIGSRVPRVY 374


>gi|169334902|ref|ZP_02862095.1| hypothetical protein ANASTE_01308 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257640|gb|EDS71606.1| hypothetical protein ANASTE_01308 [Anaerofustis stercorihominis DSM
           17244]
          Length = 377

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 157/370 (42%), Gaps = 20/370 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +KI+L  L NN+  +       +   V+K +AYG G E  A  L + G   F V+SV E 
Sbjct: 8   VKINLDNLINNYRVIKNKVKGKKVIPVIKADAYGHGAEICAKILMSEGADLFAVSSVYEA 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQ 127
           + LR Y   A + +L  +   +   I D ++IP I ++      ++            ++
Sbjct: 68  MCLRDYGIDADVLILGYVPDRKINKIIDNDIIPTIYNLDFAKKLNEEAGKKNKKIKVHIK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           ++TG NRLG +  E  +               + SH A +D+     ++ Q E F   I 
Sbjct: 128 INTGMNRLGFNKDEIDEAFKLLKGLDNLIYEGLFSHFATSDEVDKSYSNKQFEIFDYAIK 187

Query: 188 HYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTAEA 240
             K  +       +A+S+ I     Y     R GI LYG      K   +P + V++   
Sbjct: 188 KSKEYDLGVTINHIANSAAITDLDEYSLDAVRAGIVLYGVYPSEVKPEINPYKPVMSFYT 247

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  I      E V YG        + +AV  +GYADGY   LS             G+ 
Sbjct: 248 TITNIFHIDKDETVGYGRTFTAKEKTKVAVMCVGYADGYNRKLSN-----------KGEV 296

Query: 301 FIKGY-MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            I       ++G + MDMTM +I +   IE+GD ++IFG +I +  +A    T  Y+LL 
Sbjct: 297 LINNKYKAKVIGNVCMDMTMLEIPEEADIEIGDNVEIFGENINISSLAEICETIPYELLC 356

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 357 CINKRVKREY 366


>gi|119900214|ref|YP_935427.1| alanine racemase [Azoarcus sp. BH72]
 gi|166919546|sp|A1KCI5|ALR_AZOSB RecName: Full=Alanine racemase
 gi|119672627|emb|CAL96541.1| alanine racemase [Azoarcus sp. BH72]
          Length = 353

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 161/366 (43%), Gaps = 17/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+    +  G  R  AVVK NAYG G  + A AL       F V  
Sbjct: 2   RPATALIDLDALRHNYRLARSRHGG-RALAVVKANAYGHGAVRCAQALAAE-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E ++LR       I +L G+    + + +    L PV+    Q+    +         
Sbjct: 60  LDEALELRAAGITQTIVLLEGVFDAAELEQVVAHGLWPVVHHAAQIEMIEQAALA-RPLD 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NR G                       +++H A AD+P     + QL  F 
Sbjct: 119 IWLKVNSGMNRAGFVGDAVGSAWQRLRASGKVGEITLMTHFARADEPQVIATAEQLADFD 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
           T      G   SLA+S+ +L  P+ H    RPGI LYG      + + +Q V+T E+ +I
Sbjct: 179 TATRGLPG-PRSLANSAAVLGWPDAHADWARPGILLYGADPMPGEGNGLQPVMTLESGVI 237

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R   AG  + YG +    R   I + A+GYADGYP +              G    + 
Sbjct: 238 AVRDLAAGAPLGYGARYVAERPRRIGLVAMGYADGYPRSA-----------PDGTPVVVD 286

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    ++G+++MDM   D+TD     +G  ++++G  + ++ VA  +GT  Y+LL  +  
Sbjct: 287 GQPSMLVGRVSMDMLTVDLTDLPQAGIGSRVELWGRQVPINQVAAGAGTIAYELLCNV-K 345

Query: 364 RYAKFY 369
           R    Y
Sbjct: 346 RVVFRY 351


>gi|119485491|ref|ZP_01619819.1| alanine racemase [Lyngbya sp. PCC 8106]
 gi|119457247|gb|EAW38373.1| alanine racemase [Lyngbya sp. PCC 8106]
          Length = 404

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 100/385 (25%), Positives = 165/385 (42%), Gaps = 33/385 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++I+L A+  N   +  L S      AVVK +AYG G   +A  +  AG   F V 
Sbjct: 28  QRSWVEINLAAIAYNVEQIKTLLSPQTTLMAVVKADAYGHGAVSVAKTVSQAGAGAFAVA 87

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
           +  EG++LR    +  I VL   +   E        +      PQ        L     +
Sbjct: 88  TTPEGIELREAGIKQPILVLGAAYTPDEVKAISHWQLQPTLCTPQQALLFSEILSQLNQT 147

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L +DTG +RLG S Q A++F          +++ I SH A AD P   +   Q +R
Sbjct: 148 LEVHLNIDTGMSRLGTSWQHAVEFVQLVQRLPNLKIAGIYSHFATADSPDQTLMRQQHQR 207

Query: 182 FRTLISHY-------------KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
           F+ +I                      +++S+  L     H+ L R G+++YG     + 
Sbjct: 208 FQDVIKKIGVNPQNGLTKETVSRPCLHISNSAATLTDSALHYDLVRVGLAIYGLYPAPHL 267

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  +  +A++  I+   AG  VSYG Q    + + +AV  IGYADG P  LS  
Sbjct: 268 AATIDLKPAMQVKAKVTQIKMIEAGTGVSYGYQYVAEKITRVAVVGIGYADGIPRNLSN- 326

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       K  ++G ++P +G ITMD  M D+T    ++VG+ + + G +    I 
Sbjct: 327 ----------KMKVLVRGQLLPQIGAITMDQLMIDVTSMPDLQVGEVVTVLGQEGENTIS 376

Query: 343 LDDVALASGTTNYDLLVRIGTRYAK 367
            +D A    T ++++L     R  +
Sbjct: 377 AEDWAADLDTISWEILCGFKHRLPR 401


>gi|253991385|ref|YP_003042741.1| alanine racemase [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253782835|emb|CAQ86000.1| alanine racemase) [Photorhabdus asymbiotica]
          Length = 359

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +   AVVK NAYG G  + A  L +     F V  + 
Sbjct: 4   ATAVIDRRALRHNLQRVREIAPKSNLIAVVKANAYGHGLLETAHTLDD--ADCFGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N I  +    +     +           +
Sbjct: 62  EALTLRHGGIVKPILLLEGCFDAADLPVLVANHIETVVHSIEQLEALEQAKLSHPVKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++D+G +RLG+  ++A +F    S  K + Q   I+SH   AD+P+      Q+  F+  
Sbjct: 122 KLDSGMHRLGVRPEDAEEFYQRLSRCKNVQQPVNIVSHFGRADEPTLDTTCQQIACFQAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARI 242
            +   G E S+ +S GILL P  H    RPG+ +YG +    K      +   +T ++ +
Sbjct: 182 CADKPG-EKSIDASGGILLWPEVHQDWVRPGLMMYGVSPLSDKTAADFNLMPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +RK  AGE V YGG     RD+ + V AIGY DGYP                G   +I
Sbjct: 241 IAVRKHKAGEAVGYGGTWISERDTCLGVVAIGYGDGYPR-----------CAPSGTPIYI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI G+++MDM   D+    + +VGD   ++G  + ++ +A  +G   Y+L+ ++ 
Sbjct: 290 NGREVPIAGRVSMDMISVDLGPDAADKVGDEAVLWGDVLPVERIAECTGIITYELVTKLT 349

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 350 SRVVMEY 356


>gi|300023238|ref|YP_003755849.1| alanine racemase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525059|gb|ADJ23528.1| alanine racemase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 380

 Score =  282 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 127/364 (34%), Positives = 196/364 (53%), Gaps = 9/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + +DL  +  NW ++ A    A+ AAVVK +AYGLG E++  AL +AG   FF+ + EE 
Sbjct: 18  ITVDLAQIAANWRALAAKVAPAQCAAVVKADAYGLGAERVIAALSHAGCTTFFIATPEEA 77

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQL-TFYSKLMSCGVSHPYALQ 127
              R   P+A IF L G+  G      +  + PV+S++  +  + +     G + P AL 
Sbjct: 78  ETARKLAPEAHIFALDGLVGGCATAFANQGVTPVLSTLDDIAAWAALARMRGETLPAALH 137

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL +++    T +       +L L++SHLA AD+P    N  QL  F TL +
Sbjct: 138 IDTGLNRLGLPVRDVRRLTADPSVLSGLRLELVMSHLASADNPRDPKNRDQLLAFETLTA 197

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+  SLA+S G++LGP YHF L RPG ++YGG        P++  V   ARI+ +  
Sbjct: 198 LFPGVPRSLAASDGLMLGPAYHFNLVRPGYAIYGGQASQLAPAPVKPAVRVAARILAVAD 257

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y    +  R S IA  A GYADG P   S      +P    GG   I G++ 
Sbjct: 258 VAPGETVGYSATWRAKRPSRIATIAAGYADGVPRNSS------APDGRPGGHVLIDGHLA 311

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P++G+++MD+   D+TD     ++  D+  + G  + ++D  +A+ T  Y++L R+G R+
Sbjct: 312 PLVGRVSMDLITVDVTDLPDGAVKPHDFATLIGEGLTIEDAGIAAATIGYEILTRLGPRF 371

Query: 366 AKFY 369
            + Y
Sbjct: 372 TRLY 375


>gi|217077374|ref|YP_002335092.1| alr alanine racemase [Thermosipho africanus TCF52B]
 gi|217037229|gb|ACJ75751.1| alr alanine racemase [Thermosipho africanus TCF52B]
          Length = 364

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 145/372 (38%), Gaps = 23/372 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +     +I++     N          A+   V+K NAYG G   +A +    G+  F V 
Sbjct: 5   SRRTFAEININNYIENLKYFQKKCSPAKVMPVIKANAYGHGAVMLAKSAEKMGIDYFAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + LR       I V   +      +  D N+     ++       +         
Sbjct: 65  FLEEALILRKNGINTNILVFNYLDKDFVPLAADNNITI---TIISNEQVEEYKDLIKKPK 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             + +DTG NR+G+  ++A    +        ++  I +H A AD           +++ 
Sbjct: 122 VHINIDTGMNRVGIEPKDA-MKIYEKLISNGFEVEGIYTHFAVADSLKKEDIEFTKKQYE 180

Query: 184 TLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDKIN-KSHPMQTVVTAEAR 241
             +     ++     +S+  L G        R GI+ YG       K   ++ V+T ++ 
Sbjct: 181 KFLEVNLPVKIRHTNNSAASLSGIISCGDYVRIGIASYGLMPSNQVKDENLKPVLTWKSV 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  ++    GE VSYG       D  +A   +GYADGY   LS             G+  
Sbjct: 241 VSHVKTLKKGESVSYGRTFVAPYDMKVATIPVGYADGYWRHLSN-----------NGEVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDL 357
           I G    ILG++ MD  + +  D   +++GD + + G      I  +++A   GT NY++
Sbjct: 290 INGKRRKILGRVCMDQFVVEADD--EVKIGDEVILIGKQGNEFISAEEIADKVGTINYEV 347

Query: 358 LVRIGTRYAKFY 369
             RI  R  + Y
Sbjct: 348 TCRISERVPRIY 359


>gi|309973248|gb|ADO96449.1| Alanine racemase [Haemophilus influenzae R2846]
          Length = 360

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 16/358 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I   ALK N   +   + N++  AVVK NAYG G   +A  L    V  F V  +EE + 
Sbjct: 10  ISSHALKQNLEIIKQKALNSKIIAVVKANAYGHGVVFVASTLEQN-VDCFGVARLEEALA 68

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G    Q+  I   N I  +    +     K  +        L++DT
Sbjct: 69  LRSNGITKPILLLEGFFNEQDLPILAVNNIETVVHNHEQLEALKRSNLPSPIKVWLKIDT 128

Query: 131 GFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG++L E   F        ++      +SH + AD+  S    +Q+ RF +     
Sbjct: 129 GMHRLGVALDEVDYFYQELKKLPQIQPHLGFVSHFSRADELESDYTQLQINRFLSATKDK 188

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARIILIRK 247
           +G E ++A+S GIL  P  H +  RPGI +YG +    I K   +  V+   + +I +R 
Sbjct: 189 QG-ERTIAASGGILFWPKSHLECIRPGIIMYGISPTDTIGKEFGLTPVMNLTSSLIAVRH 247

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YGG     RD+ I V A+GY DGYP             V  G   ++ G +V
Sbjct: 248 HKQGDPVGYGGIWTSPRDTKIGVVAMGYGDGYPR-----------DVPEGTPVYLNGRLV 296

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI+G+++MDM   D+       VGD + ++G ++ ++ VA  +G  +Y+L+ ++  R 
Sbjct: 297 PIVGRVSMDMLTVDLGADSQDLVGDEVILWGKELPIETVAKFTGILSYELITKLTPRV 354


>gi|282901702|ref|ZP_06309618.1| Alanine racemase region protein [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193465|gb|EFA68446.1| Alanine racemase region protein [Cylindrospermopsis raciborskii
           CS-505]
          Length = 391

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 173/381 (45%), Gaps = 27/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++   ++IDL AL NN   +   LS  ++  AVVK +AYG G   +A  +  AG     V
Sbjct: 14  SQRAWVEIDLGALSNNVKQLVGFLSPGSQLMAVVKADAYGHGAVTVATTVLAAGATWLGV 73

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYS---KLMSC 118
            +V EG++LR    +A I +L   H P Q   I    L P + S  Q   +S     +  
Sbjct: 74  ATVTEGIQLREAGIKAPILILGATHTPEQIHAITSWQLEPTLCSPGQALIFSDLLNSIDY 133

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  +++DTG +RLG   Q+A +F           ++ + SH A AD P + +   Q
Sbjct: 134 NYELPVHIKLDTGMSRLGADWQQAGEFAQLVQGLPRLHIASVYSHFATADSPDTTIMEQQ 193

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             RF+  I+  + +        LA+S+  L     H+ + R G+++YG     ++ + +Q
Sbjct: 194 HGRFQQAIAQIRAMGIKIPSLHLANSAATLGNKELHYDMVRAGLAIYGLYPAAHQRNHLQ 253

Query: 234 --TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               +  +ARI  I+    G  VSYG +    R+  I V  IGYADG P +LS       
Sbjct: 254 LRPALQVKARITHIKTISEGTGVSYGHKFIAPREMRIGVVGIGYADGVPRSLSNQMD--- 310

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     ++G  V  +G ITMD  M DI+  + +E G+ + + G      I  DD A
Sbjct: 311 --------VLVQGQRVKQIGMITMDQLMIDISSLVEVEEGEIVTLLGEQGEENITADDWA 362

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T +++++     R  + 
Sbjct: 363 NQLNTISWEIICGFKDRLPRV 383


>gi|269121335|ref|YP_003309512.1| alanine racemase [Sebaldella termitidis ATCC 33386]
 gi|268615213|gb|ACZ09581.1| alanine racemase [Sebaldella termitidis ATCC 33386]
          Length = 356

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 97/364 (26%), Positives = 166/364 (45%), Gaps = 17/364 (4%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I+L  L++N + +  ++G++     +K +AYG G  ++   L + G++   V +  E
Sbjct: 4   WAEINLDNLRHNINILKTIAGDSMLLPAIKADAYGHGIAEVFNVLISEGIKWVGVATFNE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             KLR       I V   +     +   D N+   ++S+ ++ F +      ++    L 
Sbjct: 64  AEKLRKLDKATNILVFGPVETEDMRKAIDMNIAFPLTSMDEIDFLN---ENNLAPRVHLA 120

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG  R+G S     +    +       +  I SHL+ AD         QLE F+ ++ 
Sbjct: 121 VDTGMGRIGFSRNSLDEVKRKTEENSKINVEGIFSHLSSADTSP-EYTKRQLEDFKKIVE 179

Query: 188 HYKGIE-ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTAEARIILI 245
            +  I+   + +S G +      + + RPGI LYGG  K N  S+  + V+  ++R+  I
Sbjct: 180 KFPKIKYRHILNSFGSMQFSESKYDIIRPGIILYGGIKKENAFSYDFKPVMALKSRVSFI 239

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           +K      +SY  + +      IA  +IGYADG    L+G            G+  I   
Sbjct: 240 KKLENNSFISYNRKYEGRAGEKIATVSIGYADGIRRDLTG-----------KGEVVINNR 288

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
              I G I MD  M  I + L + VGD ++ FG +I +++VA   GT +Y++L  IG R 
Sbjct: 289 RCRIAGTICMDQLMVSIPEDLEVNVGDTVEFFGENIHIEEVAEKCGTISYEILCGIGQRV 348

Query: 366 AKFY 369
            + Y
Sbjct: 349 TRIY 352


>gi|49474549|ref|YP_032591.1| alanine racemase [Bartonella quintana str. Toulouse]
 gi|49240053|emb|CAF26478.1| Alanine racemase [Bartonella quintana str. Toulouse]
          Length = 372

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 187/364 (51%), Gaps = 14/364 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID++A+  N+ ++      A  +AVVK NAYGLG +KIAPALY AG + FFV  +EE 
Sbjct: 19  ATIDVSAIVANYKTLAQRVAPAECSAVVKANAYGLGADKIAPALYRAGCRIFFVAQIEEA 78

Query: 69  VKLRLYTPQARIF-VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           ++L+   P      +L G     E+ I    ++PV++S   +  + K         P  +
Sbjct: 79  LQLKDILPSNVTLALLNGPPHATEEFIAQAGIVPVLNSWNAIENWQKLCQKKDKKFPAII 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E           +  ++  I+SHLA  DD +   N  QL  F+T++
Sbjct: 139 QIDTNMNRLGLDKKELQQLIKKPTIFEKAEIKYILSHLANGDDATHSSNYTQLAAFKTVL 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +      AS A+S GI LGP+++F L RPGI+LYG   +       + V+  EA++I  R
Sbjct: 199 TQLPTCRASFANSGGIFLGPDFYFDLVRPGIALYGIDPQGKHPTLFKPVLKLEAQVIQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V Y       R S +   +IGYADG+   LS             G  +  G+ 
Sbjct: 259 SIEAGIPVGYEESFITRRPSTLITISIGYADGWLRILSN-----------KGTVYFNGHK 307

Query: 307 VPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +PI+G+I+MD    D T+     + GD++++ GP   L  V++ + T  +++L  +G+RY
Sbjct: 308 LPIVGRISMDSMTVDATNLDKKPQSGDWVELIGPHQTLKKVSIDANTIPHEILTSLGSRY 367

Query: 366 AKFY 369
            + Y
Sbjct: 368 QRIY 371


>gi|311745050|ref|ZP_07718835.1| Mur ligase domain protein/alanine racemase [Algoriphagus sp. PR1]
 gi|126577561|gb|EAZ81781.1| Mur ligase domain protein/alanine racemase [Algoriphagus sp. PR1]
          Length = 823

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 154/370 (41%), Gaps = 17/370 (4%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I+L AL +N++     L    +   +VK  AYG G  +IA  +   G     V   
Sbjct: 461 TTLEINLNALTHNYNFYKSRLKPETKVMVMVKAFAYGGGSVEIANHIQTMGADYLAVAFT 520

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +EGV LR +     I VL  +    +          V S        +   +        
Sbjct: 521 DEGVTLRKHGISLPIMVLNPMEESIDLCHQYELEPVVYSPAFFKMVSNYCQAHDSKLSIH 580

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRT 184
           L +DTG +RLG   +   +       +   +++ + +HL  AD+      +  QL+ F+ 
Sbjct: 581 LDMDTGMHRLGFEEKHLEELGLLLEAETRLRIASVYTHLVGADEEIHKDYSLRQLKLFKK 640

Query: 185 LISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +    + +          +S+GI+  P++   + R GI LYG       +  ++++ T +
Sbjct: 641 MKGKLEHLLPSSTLFHALNSAGIVAFPDFQMHMVRLGIGLYGVEVTGKHASSLRSISTLK 700

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I  I+    GE V Y  +  L     IA  ++GYADGY    S             G 
Sbjct: 701 TTISQIKTLEPGETVGYSRKGSLPEGGKIATLSLGYADGYDRRFSNG----------KGY 750

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I+G   PI+G I MDM M D+TD   ++ G+   I+G  I L ++A    T  Y+LL 
Sbjct: 751 VIIQGKKAPIIGNICMDMCMVDVTDIEDVKAGNEAIIYGEGISLKELADRIETIPYELLT 810

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 811 NISARVKRIY 820


>gi|296119282|ref|ZP_06837850.1| alanine racemase [Corynebacterium ammoniagenes DSM 20306]
 gi|295967674|gb|EFG80931.1| alanine racemase [Corynebacterium ammoniagenes DSM 20306]
          Length = 366

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 106/368 (28%), Positives = 167/368 (45%), Gaps = 22/368 (5%)

Query: 10  KIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +I+L A+ +N H +  L   + R   VVK +AYG G EK+AP +  AG       +V+E 
Sbjct: 7   RINLDAISHNVHKLKELVGPDVRLMCVVKADAYGHGVEKVAPVMLKAGADVLGCATVDEA 66

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           V LR     A +               D     ++  VP L     L+   V    A++V
Sbjct: 67  VALRSMGIDAPLVAWMWEPEQDL---SDALSSNIVIGVPSLQHAQVLVDIEVPVKVAIKV 123

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG +R G+   +  +      +    +++ ++SHLACAD+P +    VQ E FR  I+ 
Sbjct: 124 ETGMHRNGVDRAQWAEVFALLNDAPHIEVTGLMSHLACADEPDNPHTDVQAEEFRAAIAQ 183

Query: 189 YK--GIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  G+E     LA+S   L  P+ HF   R G++ YG        H +Q  +T  A II
Sbjct: 184 AREAGLECPINHLANSPATLTRPDLHFDQVRVGLACYGLEPVAGLDHELQPAMTWAANII 243

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            ++    GE   YG       D  +AV  +GYADG P ++ G             +  I 
Sbjct: 244 NVKPIKKGESSCYGLTWTAPADGYLAVLPVGYADGLPRSIQGSL-----------QVTIG 292

Query: 304 GYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDLLVRI 361
           G   P +G+++MD  + D+ D+   +   D   IFG       ++A A+GT NY+++ R 
Sbjct: 293 GKSYPHVGRVSMDQIVIDLGDNPFGVRADDEAIIFGEGGHSATELADAAGTINYEIICRP 352

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 353 TGRTKRIY 360


>gi|281500991|pdb|3KW3|A Chain A, Crystal Structure Of Alanine Racemase From Bartonella
           Henselae With Covalently Bound Pyridoxal Phosphate
 gi|281500992|pdb|3KW3|B Chain B, Crystal Structure Of Alanine Racemase From Bartonella
           Henselae With Covalently Bound Pyridoxal Phosphate
          Length = 376

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 116/364 (31%), Positives = 180/364 (49%), Gaps = 14/364 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID+ A+  N+ ++         +AVV  NAYGLG  KIAPALY AG + FFV  +EE 
Sbjct: 23  ATIDVRAIVANYRTLAQHVAPTECSAVVXANAYGLGAHKIAPALYQAGCRTFFVAQIEEA 82

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV--ISSVPQLTFYSKLMSCGVSHPYAL 126
           ++L+   P+  +  L    P + +     + I     S      + +         P  +
Sbjct: 83  LQLKAVLPENVMIALLNGFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAII 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDT  +RLGL  +E      N    +  ++  I+SHLA  +D S   N+ QL  F+ ++
Sbjct: 143 QVDTNMSRLGLDKKELQKLIKNPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRVL 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     + S A+S GI LG +++F L RPGI+LYG         P++ VV  EA+++  R
Sbjct: 203 AQLPTCKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPHGKHPTPLKAVVKVEAQVLQSR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V Y       R S +A  +IGYADG+P  LS             G  +  G+ 
Sbjct: 263 FIDAGIPVGYRESFMTRRPSTLATISIGYADGWPRILSN-----------KGTVYFNGHK 311

Query: 307 VPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +PI+G I+MD  + D TD     + GD++++ GP   L+ V+  + T  +++L  +G RY
Sbjct: 312 LPIVGHISMDSIIVDATDLDKKPQRGDWVELIGPHQPLEKVSTDTNTIPHEILTSLGKRY 371

Query: 366 AKFY 369
            + Y
Sbjct: 372 KRIY 375


>gi|269792742|ref|YP_003317646.1| alanine racemase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100377|gb|ACZ19364.1| alanine racemase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 380

 Score =  282 bits (721), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 155/378 (41%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R+++ L A+++N   + +  G  A+   VVK NAYGLG  ++  AL   GV  F V 
Sbjct: 3   RPTRMEVSLRAVRHNLDQIRSYVGGRAQVMGVVKANAYGLGARRVVEALRAQGVVRFAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
           + +E V+LR +     + VL    P     +   ++   + S+       ++    G   
Sbjct: 63  TPDEAVQLREWGVGEPVLVLGQCLPSAAGEMVAMDVTCAVGSLELARALSAEAERQGRQV 122

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VDTG  R+G    E         + +   +  I +H A AD+        QL RF
Sbjct: 123 KVHIKVDTGMGRIGFLPGELEAAMDQILSMRHLDVEGIFTHFATADEARLDHAEEQLRRF 182

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +   +            +S+  +  P+ H    RPGI LYG         P+   V 
Sbjct: 183 GDALDRMRCRGVRFRLRHACNSAATIRMPHGHLDAVRPGIILYGMRPSPLCPMPLNLEVP 242

Query: 238 AE--ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            E    +  +R+      +SYG +     +  IAV  IGY DGY   LSG          
Sbjct: 243 FEVNTAVAAVRELPPMWGISYGMRYVTRGNERIAVLPIGYRDGYARALSG---------- 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  I+G   P++G I MD  M D+TD  S++VGD + + G      I  ++ A    
Sbjct: 293 -KAQVLIRGRRFPVVGTICMDQCMVDVTDCPSVQVGDPVVLLGRQGDQAITPEEFASWLN 351

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++      R  + Y
Sbjct: 352 TIVYEVPGMFSERVPRVY 369


>gi|295092961|emb|CBK82052.1| alanine racemase [Coprococcus sp. ART55/1]
          Length = 389

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 99/386 (25%), Positives = 173/386 (44%), Gaps = 29/386 (7%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M ++ F R    I+L  +++N  +M  L  G+ +  AV+K +AYG G  ++A AL +  V
Sbjct: 1   MDNSNFNRVQAVINLDNIRDNITAMKRLIDGDKKMLAVIKADAYGHGAVEVAEALDDL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
             F V  ++E ++LR       I +L    P   ++I   ++ P +  V      S L  
Sbjct: 60  DFFAVAFIDEALELRRANIDKPILILGYTDPSDYELILRYDVRPAMYEVDDAQKLSDLAV 119

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           S        ++VDTG  R+G +  E  +            ++  I +H A AD+      
Sbjct: 120 SMNTKAKIHIKVDTGMGRIGFTCDEDGVKNIEKISQMPGIEIEGIFTHYAKADELDKTAA 179

Query: 176 SVQLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           + QLE+FR + S  + +   +      +S+GI+   N  F + R GI  YG         
Sbjct: 180 NGQLEKFRWINSQLEALGIHIPVRHISNSAGIMEMDNSDFDMVRSGIVTYGLYPSDEVDK 239

Query: 231 PM---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            +   +  +   +++I ++   AG  + YG       D  +A  + GYADGYP   S + 
Sbjct: 240 NIAALKPAMRLMSKVIFVKDVKAGTGIGYGWSYIADHDIKVATVSAGYADGYPRAQSNI- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                     G+  I G   PI+G++ MD  M D++    ++V D + + G D    + +
Sbjct: 299 ----------GRVIIHGEYAPIIGRVCMDQFMVDVSHIDGVKVRDDVTLIGQDGDREVTV 348

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           ++VA  + + NY+L+  I  R  + Y
Sbjct: 349 EEVAAPANSFNYELVCNISRRVPRTY 374


>gi|218281653|ref|ZP_03488054.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989]
 gi|218217260|gb|EEC90798.1| hypothetical protein EUBIFOR_00621 [Eubacterium biforme DSM 3989]
          Length = 383

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 93/383 (24%), Positives = 161/383 (42%), Gaps = 30/383 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +ID  A+++N   +  L  N +   +VK NAYGLG    A AL   GV  F V+S
Sbjct: 6   SRAWTEIDYDAIRHNVKEVKKLVKNTKIMGIVKANAYGLGDVACAKALQKCGVDYFGVSS 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHP 123
           ++E + LR    Q  I +L          + + N++  + S+      +       V   
Sbjct: 66  IDEALNLRNAGIQDNILILGYTPSMHFHYLHEQNIVQSLVSIEYARELNAYAKENDVKIR 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA------CADDPSSHVNSV 177
              +VDTG  R G+  QE      + + +   +   +    +      C D+  +     
Sbjct: 126 CHCKVDTGMCRTGIVYQEQDKHIEDIYEEYRLENLCVEGIFSHFPVSDCLDEDCTEFTKK 185

Query: 178 QLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDK----INK 228
           Q++ F  +I     +GI+     L +S GIL  P   ++  RPG+   G T      I  
Sbjct: 186 QIQLFDEVIDLLKSQGIDPGIRHLQNSYGILNYPELEYEYCRPGLLYMGVTSDDHIKIKT 245

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +     +++  A + L++    G+ VSYG      + + +A  +IGYADG P  LS    
Sbjct: 246 NPDFIPIMSMYANVSLVKWIYPGQSVSYGRHFIAEKPTKVATMSIGYADGLPRLLSNQ-- 303

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                   G +  + G    ++G + MD  M D+T+   ++ GD + I G      + +D
Sbjct: 304 --------GFEVLVHGQRCKLIGNLCMDQCMIDVTEVEDVKEGDVVCIVGHQGNEVVTVD 355

Query: 345 DVALASGTTNYDLLVRIGTRYAK 367
            ++  + T N + L  I +R  +
Sbjct: 356 QISRMAKTINNETLTSISSRVPR 378


>gi|188583600|ref|YP_001927045.1| alanine racemase [Methylobacterium populi BJ001]
 gi|179347098|gb|ACB82510.1| alanine racemase [Methylobacterium populi BJ001]
          Length = 363

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 126/363 (34%), Positives = 187/363 (51%), Gaps = 14/363 (3%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL +DL A+  NW ++ A +  A   AVVK +AYG G   +APAL+ AG + FFV  + 
Sbjct: 13  ARLTVDLAAIAANWRALGACAPQAECGAVVKADAYGCGLAAVAPALWRAGCRTFFVAHLS 72

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG+  R   P+A I+VL G+ PG  +      L PV+             +   + P AL
Sbjct: 73  EGIAARKILPEAAIYVLNGLVPGHAEAFRAHGLRPVLGDR--GELLEWAAATDGAAPAAL 130

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG NRLGL ++EAL    +    + G    ++SHL  A+ P   +N+ Q E F  + 
Sbjct: 131 HVDTGMNRLGLRVEEALALAGDPLIARAGIDL-VMSHLVSAERPDDPLNAGQAEAFARVR 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             +  + ASLA+SSG  L       L RPG +L+GG  +  + +PM+ VV  EA I+ +R
Sbjct: 190 DAFPPLRASLANSSGTCLAARARHDLLRPGYALFGGNPEPGQRNPMRPVVRLEATILQLR 249

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE   Y G+ +      +A  ++GYADGYP + S             G   + G  
Sbjct: 250 AVEAGESCGYNGRWQAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGVP 298

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            PI+G I+MD+ + D+TD+     G    + G  + +D V  A+GT  Y++L  +G+RY 
Sbjct: 299 CPIVGLISMDLIILDVTDASEARRGATATLIGDSLDIDTVGQAAGTIGYEILTGLGSRYV 358

Query: 367 KFY 369
           + Y
Sbjct: 359 RSY 361


>gi|171779289|ref|ZP_02920260.1| hypothetical protein STRINF_01137 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282345|gb|EDT47772.1| hypothetical protein STRINF_01137 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 368

 Score =  281 bits (720), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 172/382 (45%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+ +N  ++ A      +  AVVK NAYG G +K+A A+++  V
Sbjct: 1   MISSLHRPTRALIDLGAICDNIETVKANIPEGKKAFAVVKANAYGHGAKKVAQAVHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++V+E ++LR    +  I +L  I P +  +  D ++   ++S   L   ++   
Sbjct: 60  DGFCVSNVDEALELREAGIEETILILGVIMPNEVALARDYDITLTVASQEWLDLANEQDI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   E  +    +  K    +  I +H A AD+  +   + 
Sbjct: 120 SLKGVNVHLKVDSGMGRIGVRSLEEAESLMANLKKAGANVEGIFTHFATADEADNTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  ++++     A +   +S+  +      F + R GI +YG       I   +P+
Sbjct: 180 QLAFFTNIVNNLSEKPALVHASNSATSIWHSETIFNIVRLGIVMYGLNPSGTDIALPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESALVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     + +     +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGQFCEIVGRVSMDQITIRLPEKFP--IGTKVTLIGQEGDKAISATDLAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  +FY+
Sbjct: 346 KCGTINYEVLCLLSDRIPRFYS 367


>gi|15891641|ref|NP_357313.1| alanine racemase [Agrobacterium tumefaciens str. C58]
 gi|20137303|sp|P58737|ALR2_AGRT5 RecName: Full=Alanine racemase, catabolic
 gi|15160087|gb|AAK90098.1| alanine racemase [Agrobacterium tumefaciens str. C58]
          Length = 388

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 129/365 (35%), Positives = 201/365 (55%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++  ++  ++TAAVVK +AYGLG + ++  L+ AG ++FFV  ++E 
Sbjct: 18  LTIDLGALRDNYLTLAGMAPASQTAAVVKADAYGLGADVVSQTLFEAGCRNFFVAHIDEA 77

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           + LR   + +ARIFVL G+ PG E       + PV++S+ Q+  + +     G +   A+
Sbjct: 78  LALRLRLSAKARIFVLNGLQPGNETSCAAMAITPVLNSLEQIAQWSAHARELGKTLTAAV 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG  RLGLS +E    +         +++ ++SHLACAD+P    N+ QL   R   
Sbjct: 138 QIDTGMCRLGLSPEELEILSAKQQLLDGIEIAFVMSHLACADEPDHVSNAAQLAVMRKAA 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + +       ++S GI LG +YH  L RPGI+LYGG       +PM+ VV  +  +I  R
Sbjct: 198 TAFPETPVCFSNSGGIFLGNDYHNALLRPGIALYGGAPSAAGPNPMKPVVRLDVAVIQTR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG LV YGG    +  + +A  A GYADG P +LS             G  +  G  
Sbjct: 258 TVPAGSLVGYGGSFTASVPTRLATIAAGYADGLPRSLSNR-----------GAAWYNGVR 306

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI G+++MD  + DI+      +  G  +Q+ GPD  L+D+A  +GT  Y++L  +G R
Sbjct: 307 LPIAGRVSMDSIILDISALPEGTLTQGSLVQMIGPDQTLEDIAEDAGTIAYEILTGLGRR 366

Query: 365 YAKFY 369
           Y + Y
Sbjct: 367 YRRSY 371


>gi|326202147|ref|ZP_08192017.1| alanine racemase [Clostridium papyrosolvens DSM 2782]
 gi|325987942|gb|EGD48768.1| alanine racemase [Clostridium papyrosolvens DSM 2782]
          Length = 719

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 115/381 (30%), Positives = 181/381 (47%), Gaps = 31/381 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +ID+  LK+N + +  L  +  +  AVVK NAYG G  +I+ +L  AGV  F V +
Sbjct: 349 RAWAEIDMDRLKHNVNQLKLLLPHDCQLMAVVKSNAYGHGDIEISKSLNKAGVYAFAVAT 408

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + EG++LR    +  I +L   HP +  ++   +L     +V    +   L S G+    
Sbjct: 409 LSEGIELRNNKIKGEILILGYTHPDEAPLLVRYDLTQ---TVVDYEYAEILDSTGLKIKV 465

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLER 181
            +++DTG +RLG +  +AL     ++N K   +    +HL+ AD            Q+++
Sbjct: 466 HIKIDTGMHRLGET-NDALTNLDRTYNCKNLIVGGTYTHLSSADSVEPSNIIFTKEQIKK 524

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           F + ++     +    +  + SS GIL  P       R GI+LYG   K N+   ++   
Sbjct: 525 FYSTLNYLKSHNRNPSKIHIQSSYGILNYPELDCDYARVGIALYGVLSKENEKTKIRAAL 584

Query: 234 -TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             V++ +ARI+L ++   GE V YG      + + IAV  IGYADG P +LS        
Sbjct: 585 EPVLSLKARIVLTKEIQEGESVGYGRSFIAVKRTKIAVLCIGYADGIPRSLS-------- 636

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                G   IKG   PI+G I MD    DI+D   ++ GD   + G D    I  + VA 
Sbjct: 637 --CGKGYVLIKGKKAPIIGNICMDQLTVDISDIPDVQQGDIATLIGDDGNEAITAEQVAS 694

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT   +LL R+G R  + Y
Sbjct: 695 LAGTITNELLSRLGNRIERVY 715


>gi|19076018|ref|NP_588518.1| alanine racemase Alr1 [Schizosaccharomyces pombe 972h-]
 gi|12229634|sp|O59828|ALR1_SCHPO RecName: Full=Alanine racemase, catabolic
 gi|3136037|emb|CAA19068.1| alanine racemase Alr1 [Schizosaccharomyces pombe]
          Length = 375

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 173/379 (45%), Gaps = 31/379 (8%)

Query: 11  IDLTALKNNWHSMNAL----SGNARTAAVVKDNAYGLGCEKIAPALYNA--GVQDFFVTS 64
           IDL A+ +N++    +    + +    A+VK NAYG G  ++A  L      +  F V+S
Sbjct: 8   IDLHAIAHNYNVAKQMMLQKNPSGHVLAIVKANAYGHGAVQVARFLLKHCSSIDGFGVSS 67

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIF--DTNLIPVISSVPQLTFYSKLMSCGVSH 122
           +EE ++LR      +I +L G    ++++    D N   +I S  Q+  + K        
Sbjct: 68  IEEALELRHGGIYNKIVLLEGFFTEEDELKLIDDYNFSIIIHSEDQVNSFIKY-PFNRPV 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLER 181
              L++D+G NRLG +  + + F +   N K       I+H A AD   +      Q + 
Sbjct: 127 EIWLKLDSGMNRLGFTPSQFMKFYNLLSNNKNVSNIGKITHFAFADMLENPEHTLKQWDI 186

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--------PMQ 233
           F   ++H  G  ++  S+  +           R GI LYG +  ++K+          ++
Sbjct: 187 FEKSVAHLPGPLSAGGSAIILGWLNTVCTDWLRAGIMLYGISPFLSKNKDSKTPESVNIK 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + II ++    G+ + YGG+   TRD  + V A+GY DG+P             
Sbjct: 247 PAMKLVSTIISVKHVDKGQPIGYGGRYVATRDMKLGVVAMGYGDGFPRQ----------- 295

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALAS-G 351
           V  G    + G   PI+G+++MDM   D++D   ++ GD +  +G P++ + D+A     
Sbjct: 296 VKDGCPVLVNGVKAPIVGRVSMDMLTVDLSDIPDVKPGDEVIFWGTPELTVADIAKYCSD 355

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T+ Y+L+ ++  R    YT
Sbjct: 356 TSPYELVTKLTRRVPLQYT 374


>gi|294788699|ref|ZP_06753940.1| alanine racemase [Simonsiella muelleri ATCC 29453]
 gi|294483181|gb|EFG30867.1| alanine racemase [Simonsiella muelleri ATCC 29453]
          Length = 352

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 16/360 (4%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +I L  L+ N+  +  + G  +  AV+K NAYG G  + A AL++     F V  +EE +
Sbjct: 7   EIRLNYLRENYQILKKIHGK-KLLAVIKANAYGHGAVQCAQALHDI-ADGFAVAFLEEAI 64

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           +LR +     I +L G    +E  + +   +  +                      L++D
Sbjct: 65  ELREHGITRPIVLLEGTFDAKEYDLVEQYDLWTVIHQQSQLELFLAHDWRKPTTVWLKMD 124

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           +G +R G    +                 + ++H +CAD+    +  +Q+E F       
Sbjct: 125 SGMHRTGFFPHQFAAAYTALSQSDKIANIVKMTHFSCADEAERSMTDMQIESFDLGCHGL 184

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKAL 249
            G E S+A+S+ ++  P       R G++LYG       S  ++ V+   +RI   R   
Sbjct: 185 TGEE-SIANSAAMIRFPEARRDWGRAGLALYGVDPTGEFSGSLKPVMRLSSRIFAERILQ 243

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
             E + YG      R + + + A GYADGYP                     +KG    I
Sbjct: 244 PHEPIGYGANFYTKRSTRVGLVACGYADGYPRNAPNE-----------TPILVKGLRTKI 292

Query: 310 LGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +G+I+MDM   D+ DS    VGD +++FG  I + ++A A+G   Y++L  I  R  + Y
Sbjct: 293 IGRISMDMLTVDLNDSHE-GVGDEVELFGDLINVQEIADAAGMIPYEILCNI-KRAKRVY 350


>gi|291542251|emb|CBL15361.1| alanine racemase [Ruminococcus bromii L2-63]
          Length = 392

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 81/390 (20%), Positives = 158/390 (40%), Gaps = 32/390 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+  +    +I L A+++N++ +   ++ + +   V+K + YG G  +++      G   
Sbjct: 1   MNMVKRTWAEISLNAIEHNYNVIRNKVADDTKVCCVIKADGYGHGAVELSQIYEKLGADF 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
           F V++++EG+++R    +  I +L      + + + + ++   + S+        K +  
Sbjct: 61  FAVSNIDEGIEIRKSGSKLPIVILGYTPVSEAENLAEYDISQAVFSLEYAKELSEKCVEE 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI------ISHLACADDPSS 172
                  ++VD+G +R+G   QE     ++                   +H   +D+ + 
Sbjct: 121 DCICKMHIKVDSGMSRIGFMCQEFPRDEYSIEEICEACCLPNLEVEGLFTHFCVSDEDAE 180

Query: 173 --HVNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
                + Q E F  +    K           ++S  I   P     + R GI LYG    
Sbjct: 181 GREFTNKQYENFIHVRDSLKKRGVDISVVHCSNSGAIEDYPETCCDMVRAGIILYGLAPS 240

Query: 226 INKS--HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
              +    +   +T +  +  +++   G  +SYG      R   IA   IGYADG+    
Sbjct: 241 SKLADRLDLVPAMTLKTVVAFVKEVQKGATISYGRTFTADRKMKIATVPIGYADGFIRQ- 299

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---- 339
                         G   + G    I+G+I MD TM D+TD   ++ GD + +FG     
Sbjct: 300 ----------NAKDGYMMVNGKKAKIVGRICMDQTMLDVTDIEDVKTGDEVVVFGTGENG 349

Query: 340 DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +   D +A  +GT NY+ +  +G R  + Y
Sbjct: 350 EPTADSLAENTGTINYETVCLVGKRVPRIY 379


>gi|255527458|ref|ZP_05394329.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|296186051|ref|ZP_06854456.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|255508838|gb|EET85207.1| alanine racemase [Clostridium carboxidivorans P7]
 gi|296049319|gb|EFG88748.1| alanine racemase [Clostridium carboxidivorans P7]
          Length = 394

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/387 (23%), Positives = 164/387 (42%), Gaps = 33/387 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I++  + +N   +  ++ +    +VVK +AYG G  ++AP L   G     V  
Sbjct: 6   NPAWAEINIDNVIHNIKEIRRVAKSKEIISVVKADAYGHGAVELAPILLENGADRLAVAL 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL--------- 115
           + E ++LR    +A I +         K I   N   VI++  ++T  S           
Sbjct: 66  LSEALQLRKSGIKAPILIFGYTPLKYGKDIIHNNAEDVINNELEVTVLSYDYAKKLSKVA 125

Query: 116 MSCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                +    + VDTG  R+G     ++++  +         +  + SH + +D+ S   
Sbjct: 126 KKLNKNVKIHINVDTGMGRIGFLPTTQSVEDIYKISQLPNIIIEGLYSHFSTSDEKSKSY 185

Query: 175 NSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
            + Q +R+       +  +       +A+S+ ++  P  H    RPGI+ YG     + +
Sbjct: 186 ANKQFKRYLDFYERLEKKDIRINIKHIANSAALIDLPYTHLDAVRPGIANYGYYPSEDVN 245

Query: 230 HPMQ---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           H +      +T +  ++  R   AG  + YG   +  R S I    IGYADGY   LS +
Sbjct: 246 HDIIKLKPTMTLKCNVVASRTLKAGSYIGYGRTFRTERASRIVTLGIGYADGYDRRLSNV 305

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                      G+  +KG   PI+G+I MDM M D+TD   I+V D + + G  +     
Sbjct: 306 -----------GEIVVKGKAAPIVGRICMDMCMSDVTDIGDIKVSDEVILMGESLSEKTT 354

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           ++++A  +GT   ++   I  R  + Y
Sbjct: 355 VENIAKLTGTIPQEVTSNISKRVPRHY 381


>gi|39995713|ref|NP_951664.1| alanine racemase [Geobacter sulfurreducens PCA]
 gi|81832115|sp|Q74FK2|ALR_GEOSL RecName: Full=Alanine racemase
 gi|39982477|gb|AAR33937.1| alanine racemase [Geobacter sulfurreducens PCA]
 gi|298504725|gb|ADI83448.1| alanine racemase [Geobacter sulfurreducens KN400]
          Length = 382

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 102/386 (26%), Positives = 165/386 (42%), Gaps = 29/386 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S      ++DL AL++N+   +  +       AVVK +AYG G   IA  L   GV  
Sbjct: 1   MDS-RPTIAEVDLAALRHNYDLVVRTIPRGCGILAVVKADAYGHGFMDIARELETLGVTA 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V  + EG++LR       + +L G++PGQE+     NL   + S+ Q           
Sbjct: 60  FGVAFLAEGIQLRKSGIDRPVLILGGVYPGQERKCVGFNLSTALFSLEQARVLDDAAGRL 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VN 175
                   ++DTG  RLG+  +EA  F       K   L  IISH A AD+        +
Sbjct: 120 YRRARVHAKIDTGMGRLGIPHEEASAFFSALRELKHLDLEGIISHFASADELDEDGRRYS 179

Query: 176 SVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
            +Q  RF   +       ++     +A+S+           L RPGI LYG     +   
Sbjct: 180 DLQASRFAAAVAAARHEGFEPRYVHIANSAAAFGMDLPFCNLVRPGIVLYGALPSGDFEG 239

Query: 231 PM--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
            M  + ++   + I +++    G  +SY  +       L+A   +GYADGY  +L+    
Sbjct: 240 KMALKPIMRLRSSIAMLKWVEPGTSISYARRFTAPDRRLVASIPVGYADGYSRSLTNR-- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-----KL 343
                    G+  ++G   P++G + MD  M D+T    + VGD + + G D      + 
Sbjct: 298 ---------GEVVVRGRRAPVVGTVCMDWIMADVTHVSGVTVGDEVTLLGCDQEGNCVRA 348

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +++A  +GT  Y++   I  R  + Y
Sbjct: 349 EELAEWAGTIPYEIFCGISKRVPRVY 374


>gi|13473409|ref|NP_104976.1| alanine racemase [Mesorhizobium loti MAFF303099]
 gi|20137427|sp|Q98F05|ALR2_RHILO RecName: Full=Alanine racemase, catabolic
 gi|14024158|dbj|BAB50762.1| alanine racemase [Mesorhizobium loti MAFF303099]
          Length = 381

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 123/365 (33%), Positives = 179/365 (49%), Gaps = 17/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A++ N+  + AL G    A VVK N YGLG  K+A AL   G   FFV  + EG
Sbjct: 27  LTIDLGAIRENYRRLKALLGGVHCAGVVKANGYGLGAAKVAAALTREGCDIFFVALLAEG 86

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
           + LR        I+VL G+ PG E       L  VI+S  Q   + + +   G   P A+
Sbjct: 87  IALRKAVGTGPDIYVLNGLPPGSEPEAVAAGLCAVINSGAQLKAWRAAVHDAGRRLPAAI 146

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVD+G +RLG++  E      +S       +  ++SHLACAD+P    N  Q   F  L 
Sbjct: 147 QVDSGMSRLGMAPAEVEALAGDSSAFDGIDIKYVMSHLACADEPRHPANEQQRLAFERLR 206

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +      ASLA+SSGI LGP+YH  L RPG +LYG      + +PM  VV  +A++   R
Sbjct: 207 AMLPRAPASLANSSGIFLGPSYHHDLARPGAALYGINPTPGEPNPMLPVVWLQAKVAQTR 266

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +   G  + YG          +A  + GYADG+                     + +G  
Sbjct: 267 RIEKGAGIGYGHSYHADGPLSLATISFGYADGWLRR-------------SASAAWFEGVR 313

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +P LG+++MD  + DI+      +  GD +++ GP   +DD A  +GT  Y++L  +G R
Sbjct: 314 LPFLGRVSMDSIILDISALPPGRLREGDLVELLGPSQSVDDAAGHAGTIGYEILASLGPR 373

Query: 365 YAKFY 369
           + + Y
Sbjct: 374 FHRHY 378


>gi|227355801|ref|ZP_03840194.1| alanine racemase, catabolic [Proteus mirabilis ATCC 29906]
 gi|227164120|gb|EEI49017.1| alanine racemase, catabolic [Proteus mirabilis ATCC 29906]
          Length = 370

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 21/366 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++ I+L AL +N   + + +  ++  +VVK +AYG G   + PAL +     F + 
Sbjct: 2   SRPAKISINLDALSHNLSVIKSKAQGSKVWSVVKADAYGHGLSCVWPALSH--TDGFALI 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +++ + LR       I +L G     +  + +   +  +          +         
Sbjct: 60  ELDKAIMLREQGWVGPILLLEGFFKPDDVYLLERYSLTTVVHADWQFEAIEQAQLERPIN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++       +         + +SH A AD   +     Q+    
Sbjct: 120 IYLKLNSGMNRLGYRPEDYQQAIQRAKRITNIGSIVQMSHFANADSGLNMATQKQII--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
              S    +   LA+S+ IL  P  H    RPGI LYG +            +Q V+T  
Sbjct: 177 -DSSMVNDLPRCLANSAAILFEPQTHHSWVRPGIILYGVSPSGVWQDIADFDLQPVMTFN 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + ++ I+    GE + YG +    RD  IAV A GYADGYP                G  
Sbjct: 236 SEVLAIQSVKKGEQIGYGSRYTAQRDMRIAVVACGYADGYPRHA-----------PDGTP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             +KG+   ++G+I+MDM   D+TD   +E G  ++++G  + +D+VALA GT  Y+LL 
Sbjct: 285 VIVKGHKTQLVGRISMDMLTIDVTDLPDVEHGSPVELWGNQLPVDEVALACGTIGYELLC 344

Query: 360 RIGTRY 365
            I  R 
Sbjct: 345 AIAPRV 350


>gi|172058812|ref|YP_001815272.1| alanine racemase [Exiguobacterium sibiricum 255-15]
 gi|171991333|gb|ACB62255.1| alanine racemase [Exiguobacterium sibiricum 255-15]
          Length = 357

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++ID  A+ +N   + A  G+    AVVK + YG G   +A      G     V  
Sbjct: 3   RPTWIEIDREAIAHNVREIKARIGHQTMMAVVKADGYGHGAVTVAEIALANGADLLAVAL 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L  + P    I  + ++   + S   L    + ++       
Sbjct: 63  LEEAIELREAGIQAPILMLETLLPEHAPIASNYDVAVPVFSADWLREAKQHLTDVDHLRL 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VD+G  RLGL   E LD      +  + +L  I +H A AD+ +S +   Q   F  
Sbjct: 123 HIKVDSGMGRLGLQTPEELDAVLQELDSDVMELEGIYTHFATADELNSRLFDEQQTVFLH 182

Query: 185 LISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VVTAE 239
            +     I       S+  I L     F + R GI+LYG           +      T +
Sbjct: 183 FVERVPDIRYIHAANSAGAIRLIGQDPFNVVRIGIALYGAMPSDEMIPYYEFLRPAFTLK 242

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R++ +++   G+ +SYG       D  I    IGYADG+     G              
Sbjct: 243 SRLMQVKQVEPGQTISYGATYTAPTDEWIGTVPIGYADGWSRKFQGYSL----------- 291

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + GY   I+G++ MD  M  +  +  +  G  + + G  + +D+ A   GT NY++L 
Sbjct: 292 -LVDGYPCEIVGRVCMDRLMIRLPRNYPV--GTEVTLIGQGVPIDEAAHWLGTINYEVLC 348

Query: 360 RIGTRYAKF 368
           +   R  + 
Sbjct: 349 QFSKRVPRI 357


>gi|25027149|ref|NP_737203.1| alanine racemase [Corynebacterium efficiens YS-314]
 gi|259506716|ref|ZP_05749618.1| D-alanine racemase [Corynebacterium efficiens YS-314]
 gi|81846897|sp|Q8FS13|ALR_COREF RecName: Full=Alanine racemase
 gi|23492430|dbj|BAC17403.1| alanine racemase [Corynebacterium efficiens YS-314]
 gi|259165699|gb|EEW50253.1| D-alanine racemase [Corynebacterium efficiens YS-314]
          Length = 367

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 154/373 (41%), Gaps = 18/373 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +IDL A+ +N   +    G A+  AVVK + Y  G +++AP +   G   F V +
Sbjct: 2   NLLTTRIDLDAIAHNTRLLKNRVGAAKLMAVVKADGYNHGMDRVAPVMAANGADAFGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR       I               +  +   + S               +   
Sbjct: 62  IAEALALRATGITTPILCWIWSPEQDWAAAVEAGIDLAVISPRHARVLVDAPPTSRAIRV 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++VDT  +R G+  Q+         +    +++ + +HL+CAD+P +     Q E FR 
Sbjct: 122 SVKVDTALHRSGVDEQDWDAVFTLLRDCGHIEVTGLFTHLSCADEPGNPETDHQAETFRR 181

Query: 185 LISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            I   + +     E  L +S   L  P+ H  + RPG++LYG        H ++  +T  
Sbjct: 182 AIDRARALGLEVPENHLCNSPATLTRPDLHMDMVRPGVALYGLEPIPGLDHGLRPAMTWA 241

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I +++    GE  SYG   +   D  +AV   GYADG P                  +
Sbjct: 242 GAITVVKPIRKGEGTSYGLTWRAEADGFVAVVPAGYADGVPRAAQDHL-----------R 290

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIF-GPDIKLDDVALASGTTNYDL 357
             + G+  P +G++ MD  +  + D+   +  GD   IF G  +   ++A A  T NY++
Sbjct: 291 VHVNGHDYPQVGRVCMDQFVIFLGDNPHGVTAGDEAVIFGGTGMSATELADALATINYEV 350

Query: 358 LVRIGTRYAKFYT 370
           + R   R  + YT
Sbjct: 351 ICRPTGRTVRDYT 363


>gi|150020918|ref|YP_001306272.1| alanine racemase [Thermosipho melanesiensis BI429]
 gi|149793439|gb|ABR30887.1| alanine racemase [Thermosipho melanesiensis BI429]
          Length = 364

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 157/374 (41%), Gaps = 27/374 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +     +IDL    +N          ++   V+K + YG G   +A A    G+  F V 
Sbjct: 5   SRRTFAEIDLKNYIHNLKYFEEKCAPSKVMPVIKADGYGHGAIYLAKAAEKYGIDYFAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + LR    ++ I V   I     ++  + N+   + S  Q   +           
Sbjct: 65  FLEEALTLRKNGIKSDILVFNYIDKDFVELAVENNITITMLSWEQ---FELYKKLKKKPK 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLE 180
             + VDTG NR+G+  ++A  F +N+  +    +    +H A AD            Q +
Sbjct: 122 VHINVDTGMNRVGIKPKDAKKF-YNALIENEFIVEGAYTHFAVADSTKKEDILFTKKQYK 180

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-KSHPMQTVVTAE 239
            F  L  +       + +S+G +LG        R GI+ YG       K   +++V+T +
Sbjct: 181 LFSEL--NLNVKIKHVNNSAGAILGIVPIENYVRIGIASYGLMPSNEVKDENLKSVLTWK 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    GE +SYG   +      +A   +GYADGY   LS L           G+
Sbjct: 239 SIVSHVKHIEPGESISYGRTFRAKEKMKVATIPVGYADGYWRHLSNL-----------GE 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G    ILG++ MD  + +  D   ++VGD + + G      I  +++A   G+ NY
Sbjct: 288 VLIRGRRRKILGRVCMDQFVVEADD--EVQVGDEVVLIGSQGNEKITAEEIAQKVGSINY 345

Query: 356 DLLVRIGTRYAKFY 369
           ++  RI +R  + Y
Sbjct: 346 EVTCRISSRVPRIY 359


>gi|297562974|ref|YP_003681948.1| alanine racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296847422|gb|ADH69442.1| alanine racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 376

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 87/382 (22%), Positives = 152/382 (39%), Gaps = 28/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + F   ++DL A+ +N   +   +G      VVK + YG G    A AL   G       
Sbjct: 2   SHFAHARVDLDAISHNARVLRGFAGGTPLMGVVKADGYGHGMLPAARALIAGGATWLGTA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSH 122
            + E ++LR       +               + ++   +S      T  ++    G + 
Sbjct: 62  FIGEALELRRAGLTPPVLAWIIPPGEPVAEAVEADIDLGVSDRAVLDTVIAEARRIGRTA 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNSVQL 179
              L+ DTG NR G+   +       +   +       + + SH ACAD+P     + QL
Sbjct: 122 RVQLKADTGLNRGGVGPADWGALAEAAARAEDEGHLRVTGVWSHFACADEPGHPSVARQL 181

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-HPMQ 233
            RF   +     +        +A+S+ +L  P   F L R GI+ YG +     +   ++
Sbjct: 182 SRFHEALETADKVGLTPEVRHIANSAALLTLPEARFDLVRGGIASYGLSPIPGLTGTGLR 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  +R+ L ++   G  VSYG +    R++ +A+  +GYADG P   +         
Sbjct: 242 PAMTLRSRLALTKRVPEGSGVSYGHRYVTDRETTLALVPLGYADGVPRAATNR------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG------PDIKLDDVA 347
               G   + G    + G + MD  + D+ D   +E G+Y  +FG           +D A
Sbjct: 295 ----GPVLLGGRRRAVAGTVCMDQFVVDVGDDA-VEAGEYAVLFGNPEDHPDTPTAEDWA 349

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T  Y+++ R+G R  + Y
Sbjct: 350 EILDTIPYEIVTRVGPRVPREY 371


>gi|254360577|ref|ZP_04976726.1| alanine racemase [Mannheimia haemolytica PHL213]
 gi|153091117|gb|EDN73122.1| alanine racemase [Mannheimia haemolytica PHL213]
          Length = 374

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     ID  AL++N   + + +   +  A++K NAYG G    A  L +  V  F V  
Sbjct: 2   KPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLPAAGTLADM-VDGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           + E ++++      +I ++ G     +           VI ++ QL    ++        
Sbjct: 61  LREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHNLEQLELLEQVAKEWQAEQ 120

Query: 121 -------------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
                             L++DTG +RLG+  ++   F     N  L      +SH + A
Sbjct: 121 QKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVERLKNCALVNSISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+        Q+  F      Y+  + S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDTKLGVTAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    I G +VPI+G+++MDM   D+      +VGD    +G  + ++D
Sbjct: 299 ---------PEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKVGDKAIFWGEQLLIED 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAKHIGVISYELITKLTPRV 369


>gi|396388|gb|AAC43147.1| alanine racemase [Escherichia coli str. K-12 substr. MG1655]
          Length = 358

 Score =  281 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 167/368 (45%), Gaps = 20/368 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +   +  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLREXAPASKMVAVVKANAYGHGLLETARTLPD--ADAFXVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YGG     RD+ + V A+GY DGY             +   G    
Sbjct: 241 LIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGY------------XAAPSGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G  VPI+G++ MDM   D+      + GD + ++G  + ++ +A  +  + Y+L+ R+
Sbjct: 289 VNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRL 348

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 349 TSRVAMKY 356


>gi|149369298|ref|ZP_01889150.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [unidentified eubacterium SCB49]
 gi|149356725|gb|EDM45280.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [unidentified eubacterium SCB49]
          Length = 367

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/378 (27%), Positives = 160/378 (42%), Gaps = 23/378 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       L+IDL AL+ N+H +   L  + +  AVVK N YG     IA  L +     
Sbjct: 1   MSKVTETTLEIDLNALRQNYHFIKSKLKPSTKMLAVVKANGYGSDGVIIAKELSSLDCDY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V    EGV LR    +  I VL+   P     I D  L P I S+  L  +       
Sbjct: 61  FAVAYAGEGVALRDAGIKTPILVLHP-LPVNFDTIIDNKLEPSIYSLKMLRDFIAFADSK 119

Query: 120 --VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNS 176
              ++P  L+ +TG NRLG    E      +       ++  I SHLA ++D +      
Sbjct: 120 NQKNYPIHLKFNTGLNRLGFIASEIETMLQHIAETSSVKICSIFSHLAASEDANETIFTQ 179

Query: 177 VQLERFRTLISH------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
            Q+++F+ +         Y+ I  +L ++SGIL  P   F + R GI +YG  +      
Sbjct: 180 NQIDQFQHISEEITTQIGYQPIRHTL-NTSGILNFPEAQFDMVRCGIGIYGYGNDPKFDK 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +  V++ +  I  I     G+ + Y  + + T     A   IG+ADG P +L       
Sbjct: 239 ELVPVLSLKTVISQIHHLREGDTIGYNRKGQATTALKTATLPIGHADGLPRSLG------ 292

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                     FI G   PI+G + MDM M +ITD      GD + IF      + +A   
Sbjct: 293 ----QGKASVFINGKAAPIIGNVCMDMIMVNITDI-ECNEGDEVIIFDKKHTAEMLAEQM 347

Query: 351 GTTNYDLLVRIGTRYAKF 368
            + +Y+LL  + +R  + 
Sbjct: 348 NSISYELLTGLSSRIKRI 365


>gi|88703618|ref|ZP_01101334.1| alanine racemase [Congregibacter litoralis KT71]
 gi|88702332|gb|EAQ99435.1| alanine racemase [Congregibacter litoralis KT71]
          Length = 359

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 155/367 (42%), Gaps = 16/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I    L++N   +   +  +R  A VK +AYG G    + AL +  V  F V  
Sbjct: 3   RPTLARILTGNLRHNARRVREEAPRSRIMACVKADAYGHGITTASEALNDI-VDGFAVAC 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    +  + +L G     E        + +  +      + +          
Sbjct: 62  ISEALALRDAGIKKPVLMLEGPQSPDEVPEAAHKDLTLCVNEWHQLEWLEKAGLSAPLAC 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +RLG S Q   +       K      ++ +H + AD P  +    Q+  F  
Sbjct: 122 WLKIDTGMHRLGFSPQRTAEALQRLERKAKNPELVLCTHFSSADLPKDNGVEAQVRAFDE 181

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
            ++       SLA+S+ IL  P  H    RPG  LYGG+   + +     ++  +   A 
Sbjct: 182 -VAATTAYAHSLANSAAILTIPESHRHWVRPGYMLYGGSPLADAAAATLNLKPAMEFVAE 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V Y G+ +  R S IA  A GY DGYP                G   F
Sbjct: 241 VISVRDVSVGERVGYRGRWEARRPSRIATVAAGYGDGYPRHA-----------PDGTPVF 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G + P+ G+++MDM   D+T+   I VG    ++G +  +D+VA A+ T  Y++L  +
Sbjct: 290 INGKVAPLAGRVSMDMITVDVTEHPDIAVGAKAVLWGGEPTVDEVATAADTIGYEILAGM 349

Query: 362 GTRYAKF 368
             R  + 
Sbjct: 350 PKRVPRV 356


>gi|126701086|ref|YP_001089983.1| alanine racemase [Clostridium difficile 630]
 gi|254977087|ref|ZP_05273559.1| alanine racemase [Clostridium difficile QCD-66c26]
 gi|255094415|ref|ZP_05323893.1| alanine racemase [Clostridium difficile CIP 107932]
 gi|255102672|ref|ZP_05331649.1| alanine racemase [Clostridium difficile QCD-63q42]
 gi|255316167|ref|ZP_05357750.1| alanine racemase [Clostridium difficile QCD-76w55]
 gi|255518828|ref|ZP_05386504.1| alanine racemase [Clostridium difficile QCD-97b34]
 gi|255652007|ref|ZP_05398909.1| alanine racemase [Clostridium difficile QCD-37x79]
 gi|260684982|ref|YP_003216267.1| alanine racemase [Clostridium difficile CD196]
 gi|260688640|ref|YP_003219774.1| alanine racemase [Clostridium difficile R20291]
 gi|306521749|ref|ZP_07408096.1| alanine racemase [Clostridium difficile QCD-32g58]
 gi|115252523|emb|CAJ70366.1| Alanine racemase 2 [Clostridium difficile]
 gi|260211145|emb|CBA66582.1| alanine racemase [Clostridium difficile CD196]
 gi|260214657|emb|CBE07277.1| alanine racemase [Clostridium difficile R20291]
          Length = 385

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 24/376 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +I+L  L+ N +++  L   + +   V+K +AYG G  ++A  L    V    V  
Sbjct: 7   PTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVAR 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
             EG++LR       I  L        +      +   + S+      +++    G    
Sbjct: 67  TAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKAC 126

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL--E 180
             +++D+G  R+G    +E++         +   L  + +H A AD+ S      Q    
Sbjct: 127 VHVKIDSGMTRIGFQPNEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNY 186

Query: 181 RFRTLISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
           +F +      G++     +++S+ I+  P+    + R GI LYG     +       ++ 
Sbjct: 187 KFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKDRLELRP 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  +++I  I++   G  +SYG +   T    IA   IGYADG+               
Sbjct: 247 AMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNP-------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTT 353
               K  IKG +  ++G+I MD  M  I   + I+VGD + +FG  ++  + +A   GT 
Sbjct: 299 ----KVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKDLGTI 354

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  I  R  + Y
Sbjct: 355 NYEVLCMISRRVDRVY 370


>gi|189460410|ref|ZP_03009195.1| hypothetical protein BACCOP_01049 [Bacteroides coprocola DSM 17136]
 gi|189432882|gb|EDV01867.1| hypothetical protein BACCOP_01049 [Bacteroides coprocola DSM 17136]
          Length = 821

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 152/370 (41%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L  + +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLEALVDNLNYYRNKLKPDTKMVCMVKASAYGAGSFEIAKTLEDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     + I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GADLRKAGINSSIIIMNPELTA-FKTMFDYKLEPEVYSFHLLEELIKAAGREGVSNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E          +       + SHL  +D +        Q+E F  
Sbjct: 582 IKIDTGMHRLGFAPEEIPALVDRLHRQSAVIPRSVFSHLVGSDAERFDSFTRRQIETFEN 641

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +         I   + +++GI   P   F + R GI LYG     NK      V T +
Sbjct: 642 ASAELQAGFSHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNKIL--HNVGTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I    A E V Y  +  LTR+S IA   IGYADG    L                
Sbjct: 700 TTILQIHDVPADETVGYSRKGILTRNSRIAAIPIGYADGLNRHLGNG----------NAY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG ++ +  +A    T  Y++L 
Sbjct: 750 CLVNGQKTPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDELPVTILADKLNTIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRIY 818


>gi|261493404|ref|ZP_05989930.1| alanine racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261496669|ref|ZP_05993049.1| alanine racemase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261307872|gb|EEY09195.1| alanine racemase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311048|gb|EEY12225.1| alanine racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 374

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/380 (25%), Positives = 162/380 (42%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     ID  AL++N   + + +   +  A++K NAYG G    A  L +  V  F V  
Sbjct: 2   KPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLPAAGTLADM-VDGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           + E ++++      +I ++ G     +           VI ++ QL    ++        
Sbjct: 61  LREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHNLEQLELLEQVAKEWQAEQ 120

Query: 121 -------------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
                             L++DTG +RLG+  ++   F     N  L      +SH + A
Sbjct: 121 QKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVERLKNCALVNSISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+        Q+  F      Y+  + S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDTKLGVIAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    I G +VPI+G+++MDM   D+      +VGD    +G  + ++D
Sbjct: 299 ---------PEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKVGDKAIFWGEQLLIED 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAKHIGVISYELITKLTPRV 369


>gi|167629789|ref|YP_001680288.1| alanine racemase, putative [Heliobacterium modesticaldum Ice1]
 gi|167592529|gb|ABZ84277.1| alanine racemase, putative [Heliobacterium modesticaldum Ice1]
          Length = 409

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 160/383 (41%), Gaps = 30/383 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I L+A  +N   +   +   AR  AV+K + YG G   +A      GV  F V 
Sbjct: 37  RPAWAEIRLSAFAHNLQVLRRATQPQARLMAVIKADGYGHGAVALAWEAVRQGVDCFVVA 96

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++E +KLR       I +L    P    +++ +     V          +  +  G + 
Sbjct: 97  LLDEALKLRDAGITTPILILGYTPPAACYRVVAEDLSQAVYCRTVAEALSAAALRLGRTA 156

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+V+TG  R+G    E +             +  + SH A AD+P       QLERF
Sbjct: 157 RIHLKVETGMGRVGFQGDEGVREMLAIARLPGIAVEGVFSHFATADEPDKSFAREQLERF 216

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT--- 234
            T+      +        +A+S+ IL  P  H +  RPGI+LYG +              
Sbjct: 217 LTITGRLQQAGLDIPMRHMANSAAILDLPESHLEGVRPGIALYGSSPFDGVRWDGAFLVP 276

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+T +ARII I++  AG  +SYG   +  R + IA   +GYADG   TLSG    +    
Sbjct: 277 VMTLKARIIFIKEVAAGTPISYGCTYRCPRRTRIATIPLGYADGIRRTLSGRIGAYKGE- 335

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--------KLDDV 346
                        P +G+I MD  M DI D+  +  GD + +FG            ++D 
Sbjct: 336 ----------RYFPQVGRICMDQFMIDIGDA-ELAEGDEVTLFGRWQEGGTWRTAPVEDW 384

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A GT +Y++L  I  R  + Y
Sbjct: 385 ARADGTISYEILSGISPRVPRHY 407


>gi|182682437|ref|YP_001830597.1| alanine racemase [Xylella fastidiosa M23]
 gi|182632547|gb|ACB93323.1| alanine racemase [Xylella fastidiosa M23]
 gi|307578720|gb|ADN62689.1| alanine racemase [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 362

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F V  
Sbjct: 2   RPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L G    +E  +   + +  + +                   
Sbjct: 60  IEEALELRQAGIQAPILLLEGFFEVEELELIAKHNLWTVIASSWQVRALAAFHSPSPIGV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL  +E  D   +  +       ++++HLA AD+  +   + Q   F  
Sbjct: 120 WLKLDSGMHRLGLEPKEFRDAWMSLHSLPQVGEVVLMTHLARADELDNPRTNEQASVFAH 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
                    AS+ +SSG+L     +    RPG+ LYG         + S P++ V+   +
Sbjct: 180 ASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPISQESTSLSGPLRPVMMVYS 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG      R + + V A+GYADGYP                G   
Sbjct: 239 KLIAVRELPAGEPVGYGASFVTERPTRVGVVAMGYADGYPYFAVN-----------GTPL 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y LL  
Sbjct: 288 LVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQLLCG 347

Query: 361 IGTRYAKFY 369
           +  R  ++Y
Sbjct: 348 L-KRVRRYY 355


>gi|110640090|ref|YP_680300.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282771|gb|ABG60957.1| alanine racemase [Cytophaga hutchinsonii ATCC 33406]
          Length = 842

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 161/370 (43%), Gaps = 19/370 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L  + +   +VK  +YG G  +IA  L   GV    V   +E
Sbjct: 483 LEINLDALIHNLNVYRSKLKPDTKIMCMVKAFSYGSGGFEIAQLLQYHGVDYLAVAYADE 542

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G +LR       I V+       + I+       +   V          +        ++
Sbjct: 543 GARLRENGITLPIMVMNPTLSSFDTILRYELEPEIYEPVLLKQIIEYAQAKQKHIGIHIK 602

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFRTLI 186
           +DTG  RLG   ++  +      + +  ++  + +HLA +D        + QL  F  +I
Sbjct: 603 IDTGMKRLGFEKKDVTEIAQQLKHTEFVKVYSVFTHLAASDSAEHDAFTAHQLNLFDEVI 662

Query: 187 SHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           S +            A+SSGI+     H+ + R GI LYG        + +Q +   +  
Sbjct: 663 SLFQTTLNYSFIKHAANSSGIMRFKEAHYDMVRLGIGLYGVESAGLYQNELQAISVFKTH 722

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  I++    E V Y  + ++T+ S IA  A+GYADGY                  G+  
Sbjct: 723 ISQIKEITTEESVGYSRKGRVTKPSKIATIAVGYADGYNRRFGNGI----------GEVL 772

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G   PI+G + MDM+M D+TD+ + + GD + +FG +  + D+A   GT  Y++L  +
Sbjct: 773 VNGVRCPIIGNVCMDMSMVDVTDAHAAQ-GDEVILFGHNPTVSDLAKRIGTIPYEILTSV 831

Query: 362 GTRYAKF-YT 370
           G R  +  Y+
Sbjct: 832 GARVKRIFYS 841


>gi|154489837|ref|ZP_02030098.1| hypothetical protein PARMER_00066 [Parabacteroides merdae ATCC
           43184]
 gi|218258261|ref|ZP_03474663.1| hypothetical protein PRABACTJOHN_00318 [Parabacteroides johnsonii
           DSM 18315]
 gi|154089279|gb|EDN88323.1| hypothetical protein PARMER_00066 [Parabacteroides merdae ATCC
           43184]
 gi|218225604|gb|EEC98254.1| hypothetical protein PRABACTJOHN_00318 [Parabacteroides johnsonii
           DSM 18315]
          Length = 821

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 153/369 (41%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N++     L    +   +VK   YG G  ++A  L         V   +E
Sbjct: 463 LEVNLDAVVHNFNYYRSKLKPETKMVCMVKAFGYGAGSYELAKTLQEHRCDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           G +LR       + V+         +  +     V S         +    G++ +P  +
Sbjct: 523 GEELRKEGISIPLIVMNPEFSSFNVLFENQLEPEVYSFRLLDAMIKETERRGITSYPIHI 582

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG   ++  +       +       + SHL  +D          QL+ F  +
Sbjct: 583 KIDTGMHRLGFQPEDVPEVCRRLKEQSGVVARSVFSHLVGSDSYIFDDFTKKQLDTFTRV 642

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +         +   + +S+GI    +Y   + R GI LYG +    K     +  T + 
Sbjct: 643 AAELEAGLEYKVIKHILNSAGIERFTDYQMDMVRLGIGLYGVSASGQKGLRNIS--TLKT 700

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AG+ + Y     + RDS IA+  IGYADG     S            GG+ 
Sbjct: 701 TILQIQNVPAGDSIGYSRMSYVKRDSRIAIIPIGYADGLDRHFSNG----------GGEV 750

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G+  PI+G I MD  M D+TD+     GD + IFG ++ + +++    T  Y++L  
Sbjct: 751 VINGHRCPIIGNICMDACMIDVTDT-DAHEGDSVIIFGEELPVSELSDKLKTIPYEILTS 809

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 810 ISPRVKRVY 818


>gi|325979040|ref|YP_004288756.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|325178968|emb|CBZ49012.1| Alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 368

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   +  IDL A+  N  ++ A    + +  AVVK NAYG G   +A A+++  V
Sbjct: 1   MISSLHRPTKAVIDLDAICQNIDAVKANIPQDKKAFAVVKANAYGHGATNVAQAIHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  I P +  +  D ++   ++S   L   ++   
Sbjct: 60  DGFCVSNIDEALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQEWLDLANEQGI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   +  +    +  K    ++ I +H A AD+      + 
Sbjct: 120 SLAGLDVHLKVDSGMGRIGVRSLDEAENVIANLKKSGANVAGIFTHFATADEADDTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QLE F  L+++     A +   +S+  +      F L R GI +YG      +++  +P+
Sbjct: 180 QLEFFTNLVNNLSDKPAIVHASNSATSIWHSETIFNLVRLGIVMYGLNPSGTELDLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     + + L   +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGEFCEIVGRVSMDQITIRLPEKLP--IGTKVTLIGQEGSKVISATDLAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  + Y+
Sbjct: 346 KRGTINYEVLCLLSDRIPRVYS 367


>gi|321311401|ref|YP_004203688.1| alanine racemase [Bacillus subtilis BSn5]
 gi|320017675|gb|ADV92661.1| alanine racemase [Bacillus subtilis BSn5]
          Length = 394

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 172/384 (44%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++     + ++  AVVK N YG G  ++A      G  +  V 
Sbjct: 6   REVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           SVEEG+ LR     A I VL        K     N+      V  +   ++++    S  
Sbjct: 66  SVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILEKEASAN 125

Query: 124 Y---ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+   +E L+        K  + + I +H + AD+P + +  +Q 
Sbjct: 126 RLAIHINVDTGMGRLGVRTKEELLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQH 185

Query: 180 ERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           E+F + +S    +GIE     + +++  +  P +   + R GI LYG             
Sbjct: 186 EKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLV 245

Query: 231 PMQTVVTAEARIILIRKAL-AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            ++  ++ +ARI  ++        VSYG       + +IA   IGYADGY   LS     
Sbjct: 246 KLEPALSLKARIAYVKTMRTEPRTVSYGATYIAEPNEVIATLPIGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + ++   + G+ + I+G     +I +D+
Sbjct: 303 --------GFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGEEVVIYGKQKGAEISVDE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY+++  +  R  +FY
Sbjct: 355 VAEMLNTINYEVVSTLSRRIPRFY 378


>gi|197285367|ref|YP_002151239.1| alanine racemase, catabolic [Proteus mirabilis HI4320]
 gi|194682854|emb|CAR43168.1| alanine racemase, catabolic [Proteus mirabilis HI4320]
          Length = 370

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 21/366 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++ I+L AL +N   + + +  ++  +VVK +AYG G   + PAL +     F + 
Sbjct: 2   SRPAKISINLDALSHNLSVIKSKAQGSKVWSVVKADAYGHGLSCVWPALSH--TDGFALI 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +++ + LR       I +L G     +  + +   +  +          +         
Sbjct: 60  ELDKAIMLREQGWVGPILLLEGFFKPDDVYLLERYSLTTVVHADWQFEAIEQAQLERPIN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++       +         + +SH A AD   +     Q+    
Sbjct: 120 IYLKLNSGMNRLGYRPEDYQQAIQRAKGITNIGSIVQMSHFANADTGLNMATQKQII--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
              S    +   LA+S+ IL  P  H    RPGI LYG +            +Q V+T  
Sbjct: 177 -DSSMVNDLPRCLANSAAILFEPQTHHSWVRPGIILYGVSPSGVWQDIADFDLQPVMTFN 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + ++ I+    GE + YG +    RD  IAV A GYADGYP                G  
Sbjct: 236 SEVLAIQSVKKGEQIGYGSRYTAQRDMRIAVVACGYADGYPRHA-----------PDGTP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             +KG+   ++G+I+MDM   D+TD   +E G  ++++G  + +D+VALA GT  Y+LL 
Sbjct: 285 VIVKGHKTQLVGRISMDMLTIDVTDLPDVEHGSPVELWGNQLPVDEVALACGTIGYELLC 344

Query: 360 RIGTRY 365
            I  R 
Sbjct: 345 AIAPRV 350


>gi|261822874|ref|YP_003260980.1| alanine racemase [Pectobacterium wasabiae WPP163]
 gi|261606887|gb|ACX89373.1| alanine racemase [Pectobacterium wasabiae WPP163]
          Length = 359

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/374 (27%), Positives = 166/374 (44%), Gaps = 21/374 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       I   AL++N   +  L+  ++  AVVK NAYG G  + A    +     +
Sbjct: 1   MKT---ATAVISRRALRHNLQRIRQLAPGSQVVAVVKANAYGHGMIESAHTFCD--ADCY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  + E + LR       I +L G     +  +   + +      P+     +  +   
Sbjct: 56  GVARLSEALALRAAGITKPIVLLEGFFSADDLPLLAEHQLETAVHSPEQLAALEQATLPQ 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++DTG +RLG+  ++A  F    +  + + Q   I+SH   AD+P +     QL
Sbjct: 116 PLRVWMKLDTGMHRLGVLPEQADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
             F        G + S+A+S GILL P  H    RPGI LYG +   N+       Q  +
Sbjct: 176 ACFDAFTQGKPGAQ-SIAASGGILLWPQAHRDRVRPGIILYGVSPLDNEDAAHFGFQPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I +R+  AGE V YG      RD+ + V A+GY DGYP                
Sbjct: 235 TFTSHLIAVREHKAGEAVGYGSTWTSPRDTRLGVVAVGYGDGYPR-----------CAPA 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    I G  VP+ G+++MDM   D+      +VGD   ++GP + ++ +A  +G + Y+
Sbjct: 284 GTPVLINGREVPLSGRVSMDMITIDLGPDAQDKVGDEAILWGPALSVERIAAHTGVSAYE 343

Query: 357 LLVRIGTRYAKFYT 370
           L+ R+  R    YT
Sbjct: 344 LITRLTQRATLEYT 357


>gi|261343600|ref|ZP_05971245.1| alanine racemase [Providencia rustigianii DSM 4541]
 gi|282567981|gb|EFB73516.1| alanine racemase [Providencia rustigianii DSM 4541]
          Length = 354

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 163/367 (44%), Gaps = 23/367 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  I L +L++N   +    G A+  +V+K +AYG G  ++   L N     F V  
Sbjct: 3   RPIRAVIHLQSLEHNLSVIRQNIGAAKIWSVLKADAYGHGIHRVWRGLKN--TDGFAVLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    +  I +L G    ++  + D   +             +  +       
Sbjct: 61  LHEAILLREEGWEGPILLLEGFFQQEDLQVIDQYQLTTSVHSHWQLTAIEQATLHQPLSV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ-LERFR 183
            +++++G NRLG + +E +       +    +   ++SH A +D PS     +Q + +F 
Sbjct: 121 YIKLNSGMNRLGFTTEEYVSVVSKLQSMANVKNVTLMSHFANSDIPSGIDQPLQKIMQF- 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAE 239
                   +   +A+S  +L   N H+   R GI LYG +     S    + +Q  ++ +
Sbjct: 180 ----DGLHLNTCIANSGAVLWHKNTHYDWVRAGIVLYGASPSGKWSDIEKYNLQAAMSLQ 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I +  AGE + YG +   T+   IA  A GYADGYP                G  
Sbjct: 236 SEIIAIHEIQAGESIGYGSKFTTTKPMHIATVACGYADGYPRHA-----------PSGTP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +  G    +LG ++MDM   DI+D    ++G  ++++G +I +DDVA A+GT  Y+LL 
Sbjct: 285 VWCNGMRCSLLGAVSMDMLTIDISDCPDAKLGSLVELWGQNIPVDDVAEAAGTIGYELLC 344

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 345 ALARRVP 351


>gi|251788347|ref|YP_003003068.1| alanine racemase [Dickeya zeae Ech1591]
 gi|247536968|gb|ACT05589.1| alanine racemase [Dickeya zeae Ech1591]
          Length = 358

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 163/373 (43%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       ID  AL++N   +  ++  +R  A+VK NAYG G  + A A  +     +
Sbjct: 1   MKT---ATAVIDRQALRHNLQHIRQMAPQSRLIAIVKANAYGHGAVEAARAFSD--ADGY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ + E + LR       I +L G     E  +   + +       +     +      
Sbjct: 56  GVSRLSEALALRTAGITKPILLLEGFFAADELPLLAEHQLETAVHCEEQLAALEQAHLPH 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++DTG +RLG+  Q+A  F    S    + Q   I+SH   AD+P +     QL
Sbjct: 116 PLTVWMKLDTGMHRLGVLPQQAEAFYARLSRCSNVVQPVNIMSHFCRADEPQTDTTQRQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VV 236
           + F        G   S+A+S GILL P  H    RPGI  YG +               +
Sbjct: 176 DCFDAFAQGKPG-RQSIAASGGILLWPQAHRDQIRPGIIQYGVSPLAEGDASQWQLKPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +R+I +R+  AGE V YG      RD+ + V AIGY DGYP                
Sbjct: 235 TLTSRLIAVREHPAGEPVGYGSLWSSPRDTRLGVIAIGYGDGYPR-----------DAKS 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   +I G  VP+ G+++MDM   D+      +VGD + ++G  + ++ +A  +G + Y+
Sbjct: 284 GTPVWINGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGGPLPVEKIAAHNGISAYE 343

Query: 357 LLVRIGTRYAKFY 369
           L+ R+  R    Y
Sbjct: 344 LITRLTARTELEY 356


>gi|71275083|ref|ZP_00651370.1| Alanine racemase [Xylella fastidiosa Dixon]
 gi|170731066|ref|YP_001776499.1| alanine racemase [Xylella fastidiosa M12]
 gi|71163892|gb|EAO13607.1| Alanine racemase [Xylella fastidiosa Dixon]
 gi|167965859|gb|ACA12869.1| Alanine racemase [Xylella fastidiosa M12]
          Length = 369

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F V  
Sbjct: 9   RPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGFAVAC 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L G    +E  +   + +  + +                   
Sbjct: 67  IEEALELRQAGIQAPILLLEGFFEVEELELIAKHNLWTVIASSWQVRALAAFHSPSPIGV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL  +E  D   +  +       ++++HLA AD+  +   + Q   F  
Sbjct: 127 WLKLDSGMHRLGLEPKEFRDAWMSLHSLPQVGEVVLMTHLARADELDNPRTNEQASVFAH 186

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
                    AS+ +SSG+L     +    RPG+ LYG         + S P++ V+   +
Sbjct: 187 ASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPISQESTSLSGPLRPVMMVYS 245

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG      R + + V A+GYADGYP                G   
Sbjct: 246 KLIAVRELPAGEPVGYGASFVTERPTRVGVVAMGYADGYPYFAVN-----------GTPL 294

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y LL  
Sbjct: 295 LVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQLLCG 354

Query: 361 IGTRYAKFY 369
           +  R  ++Y
Sbjct: 355 L-KRVRRYY 362


>gi|86606130|ref|YP_474893.1| alanine racemase [Synechococcus sp. JA-3-3Ab]
 gi|86554672|gb|ABC99630.1| alanine racemase [Synechococcus sp. JA-3-3Ab]
          Length = 429

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 111/378 (29%), Positives = 173/378 (45%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++ID   L+ N   +   LS +    AVVK NAYG G   +AP    AG +   V 
Sbjct: 56  SRAWVEIDAAQLRENLRLLQARLSPDTEIWAVVKANAYGHGARLVAPIALAAGAKGLCVA 115

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKI--IFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           ++ EG++LR    QA I VL  ++   E    +     + +  +             G  
Sbjct: 116 TLAEGIELRQAGLQAPILVLGALNTWAELQQAMAARLEVSLTRAEQIPVMRQVARWAGRP 175

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  + VDTG  RLG+  QEA             +   + SH A AD+P S V + Q  R
Sbjct: 176 VPVHVNVDTGMTRLGIPWQEAAAVWGQICRIPELEGCSLFSHFATADEPDSPVMAQQEAR 235

Query: 182 FRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-QTV 235
           F  ++   +          L +S+G L+    H+   R G++LYG +   +   P  + +
Sbjct: 236 FAQVVEQIRQAGDPLPPLHLDNSAGALIH--LHYPRVRLGLALYGLSPAPHLQVPGLRPI 293

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +AR+  I+   A   VSYG +   +R S IA  AIGYADG P  LSG          
Sbjct: 294 LRLKARLTHIQTVPAHTGVSYGHRYVTSRPSRIATLAIGYADGIPRRLSGWL-------- 345

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-----KLDDVALAS 350
              +G+++G ++  +G ITMD  M+D+T+   I+VGD +++ GP +      + D A   
Sbjct: 346 ---RGWVRGSLIQQVGTITMDQCMWDVTERPDIQVGDVVELLGPHLASAGFSIQDWADQL 402

Query: 351 GTTNYDLLVRIGTRYAKF 368
           GT +Y+LL  +  R  + 
Sbjct: 403 GTISYELLCGLSARLPRV 420


>gi|308172332|ref|YP_003919037.1| D-alanine racemase [Bacillus amyloliquefaciens DSM 7]
 gi|307605196|emb|CBI41567.1| D-alanine racemase [Bacillus amyloliquefaciens DSM 7]
 gi|328552144|gb|AEB22636.1| alanine racemase [Bacillus amyloliquefaciens TA208]
 gi|328910417|gb|AEB62013.1| D-alanine racemase [Bacillus amyloliquefaciens LL3]
          Length = 389

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 162/384 (42%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M++  F R    +I+L+A+K N   M    G N    AVVK NAYG G  ++  A   AG
Sbjct: 1   MNTASFYRDTWAEINLSAIKENITHMKKHIGENVHLMAVVKANAYGHGDLEVGKAALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL  + P   +   + ++     SV  L   ++ +
Sbjct: 61  ASCLAVAILDEAISLRKRGITAPILVLGAVPPEYVQAAAEYDVTLTGYSVEWLQEAARHL 120

Query: 117 SCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               + P+ L+VDTG NRLG+   +E                  + +H A AD+ +    
Sbjct: 121 GSE-TVPFHLKVDTGMNRLGVKTEEEIQSVLKILSQNPGLVCKGVFTHFATADEKNRDYF 179

Query: 176 SVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             Q ERF+ LI+      +    A+S+  L      F   R GIS+YG     +  + + 
Sbjct: 180 LFQFERFKKLIAPLPLKELMVHCANSAAGLRLKKGFFNAVRFGISMYGLRPSADIQNEIP 239

Query: 234 TVV----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++K   GE VSYG      +D  I    IGYADG+   LS     
Sbjct: 240 FQLKPAFTLHSVLSHVKKIRKGESVSYGATYTAEKDQWIGTVPIGYADGWLRKLS----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  G    I G  + I G+I MD  M ++  S     G  + + G      I +D+
Sbjct: 295 -------GTAVLIDGKRMNIAGRICMDQLMVELDQSYP--PGTKVTLIGSQKEETITMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IAGRLETINYEIPCTISSRVPRMF 369


>gi|297564288|ref|YP_003683261.1| alanine racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296848737|gb|ADH70755.1| alanine racemase [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 402

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 26/370 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D++A+ +N   M   + N+   AVVK N +G G  ++A A   AG     VTS+EE + 
Sbjct: 26  VDISAIAHNVRFMAKRT-NSEILAVVKANGFGHGAVEVARASLEAGATWLGVTSLEEALA 84

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVD 129
           LR    +A +                 ++   + SV  L   +      G      L+ D
Sbjct: 85  LRRAGLRAPVLCWLHRADQDFDSAVAADVDLSVPSVGHLRAVADAAVRTGRVAHVHLKAD 144

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           TG +R G            +   +L    ++  + SHLA AD P +   + Q+  F   +
Sbjct: 145 TGLSRNGAPPDAWPGLVGLARVLELDGLVRVRGVWSHLASADLPGAATTAQQVTAFEGAL 204

Query: 187 SHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           S  +          LA+++ IL  P  HF L R G+ LYG      +   ++  +T  AR
Sbjct: 205 SQARAAGLDPSLRHLANTAAILNEPATHFDLVRAGVGLYGVEPVEGRRFGLRLAMTLRAR 264

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           + ++R+  AG  VSY       R+SL+A+  +GYADG P                    +
Sbjct: 265 VAMVRRVPAGTGVSYHHAYTTPRESLLALVPLGYADGVPRAAGDR-----------AYVW 313

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDL 357
           I G   P+ G+I MD  + D+   + +  GD + +FGP    +  +++ A  +GT  +++
Sbjct: 314 IAGRRCPVAGRIAMDQFVVDVGG-MDVREGDEVVVFGPGDRGEPTVEEWADWAGTIPHEI 372

Query: 358 LVRIGTRYAK 367
           L  +G R  +
Sbjct: 373 LTGVGARVPR 382


>gi|144899038|emb|CAM75902.1| Alanine racemase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 369

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 129/376 (34%), Positives = 192/376 (51%), Gaps = 17/376 (4%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M +++     L IDL A+ +NW ++ A + NA  A VVK + YGLG   +A AL  AG  
Sbjct: 1   MTAHDRATGILSIDLDAIADNWRTLAAHAPNAEAAGVVKADGYGLGAAPVARALRKAGCT 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            FFV +++EG+ LR +   ARI VL G+ PG         LIPV++S  Q+  +S   + 
Sbjct: 61  TFFVATIDEGISLRPHVNDARILVLGGVLPGTGADFIGHQLIPVLNSPEQIGLWSGFAAA 120

Query: 119 -GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G   P A+ +D+G NRLGL          ++      Q  L++SH+ACAD+    +N  
Sbjct: 121 GGRPLPAAIHIDSGMNRLGLDETAVELLAADNRRLDGIQPVLVMSHMACADERDHAMNRQ 180

Query: 178 QLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           QL+RF  L          SLA+SS I LG +YHF L RPG  LYG     +  +P++  V
Sbjct: 181 QLDRFTVLADRLGVSAPRSLAASSTIFLGADYHFDLIRPGAGLYGINPMPDSPNPLRQTV 240

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
               +I+ +R     + V YG   +      +A  A GYADG   +L             
Sbjct: 241 RLHGKILQVRDVDTPQTVGYGASHRFKSKGRVATIACGYADGLFRSLGNR---------- 290

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTN 354
            G G I G  VP++G+I+MD+   D++      V  G  +++ GPD  +D +A  +GT  
Sbjct: 291 -GFGVIGGVKVPVVGRISMDLITLDVSAVAPAHVHAGALVELIGPDHDVDALAAEAGTIG 349

Query: 355 YDLLVRIGTRYAKFYT 370
           Y++L  +G RY + Y+
Sbjct: 350 YEILTSLGRRYLRDYS 365


>gi|315185426|gb|EFU19197.1| alanine racemase [Spirochaeta thermophila DSM 6578]
          Length = 388

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 157/373 (42%), Gaps = 23/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             I L  L++N   +    G  R   A VK +AYG G  ++   L   GV+   V + EE
Sbjct: 6   AVIYLPHLRHNLREIRRRVGEGRMVCAAVKADAYGHGAVRVGRVLVEEGVEMLGVATPEE 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYAL 126
           G +L      AR+ +L        ++  +  +   +              + G      +
Sbjct: 66  GAELVEAGVGARVLLLGLTDGAGLELAVEAGVELAVGDREYVREVVRVARAKGRRVRVHV 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VDTG  R G + +EA+          + +L+ + +H   +D+        Q+ERF  ++
Sbjct: 126 EVDTGMGRTGCAPEEAVGVVEEVEGAGVLELAGMWTHFPSSDEADDGFTEAQVERFLQVV 185

Query: 187 SHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTAE 239
              +           A+S GI+  P     + RPGISLYG      +     +  V+   
Sbjct: 186 GRVRARGISPGLLHAANSGGIIGHPPSWLDMVRPGISLYGYYPSEEQERTLSLLPVMEFV 245

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++++ ++K   G  VSYG   +  RD+ IA  A GYADGY   LS              +
Sbjct: 246 SQVVFLKKVRKGTPVSYGRTWRAPRDTWIATVAAGYADGYSRLLSSR-----------AE 294

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD---IKLDDVALASGTTNYD 356
             I+G   P++G++ MD  M D+   L +   D + +FGPD      +++A   GT  Y+
Sbjct: 295 VLIRGRRYPVVGRVCMDQFMVDVGPHLEVARYDRVVLFGPDPAGPSAEELARLVGTIPYE 354

Query: 357 LLVRIGTRYAKFY 369
           +   +  R  + Y
Sbjct: 355 ITCAVSRRVPRVY 367


>gi|255280965|ref|ZP_05345520.1| alanine racemase [Bryantella formatexigens DSM 14469]
 gi|255268413|gb|EET61618.1| alanine racemase [Bryantella formatexigens DSM 14469]
          Length = 390

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 164/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M +   +  +IDL A+  N+ SM   +  +A   AV+K + YG G   IA        + 
Sbjct: 1   MKNYSRVYAEIDLDAIAYNFESMHRNIHPSAGMIAVIKADGYGHGAVPIARLAEPLDYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F V + EE ++LR    +  + +L  +     + +   ++ PV+  +      SK    
Sbjct: 61  GFAVATAEEALQLRTAGIKKPVLILGYVFEEHYEELIRADIRPVVFKLSMAEQLSKEAVR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    + +DTG  R+G     E+L            ++  I +H A AD+       
Sbjct: 121 QQKNAVIHIGLDTGMTRIGFPCTAESLLEIMLISRLPNIKIEGIFTHFARADETDKTSAQ 180

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            QLE F                   ++S+GI+  P  +  L R GIS+YG         +
Sbjct: 181 NQLEHFLKFTDSLKEKGVDIPLRHCSNSAGIIDMPYANLNLVRAGISIYGIYPSEEVCKE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           + P++  +  ++ I L+++  AG  VSYGG     R + IA   +GYADGYP  LS    
Sbjct: 241 NVPLKPAMALKSHITLVKEVEAGVAVSYGGTFVTKRKTRIATIPVGYADGYPRLLSNR-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G+  I G   PILG++ MD  M D+T+    +  D + + G D    + ++
Sbjct: 299 ---------GRVLIHGKSAPILGRVCMDQFMVDVTEIPQAQELDAVTLLGEDGESVLSVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++   SG   Y+ +  I  R  + Y
Sbjct: 350 ELGGLSGRFPYEFVCDISKRVPRVY 374


>gi|83591749|ref|YP_425501.1| alanine racemase [Rhodospirillum rubrum ATCC 11170]
 gi|123527432|sp|Q2RXD1|ALR_RHORT RecName: Full=Alanine racemase
 gi|83574663|gb|ABC21214.1| alanine racemase [Rhodospirillum rubrum ATCC 11170]
          Length = 374

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 135/366 (36%), Positives = 199/366 (54%), Gaps = 16/366 (4%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +DL A+ +NW ++   L   A  A VVK NAYGLG  K+ PAL  AG +DF V  ++E
Sbjct: 11  LTVDLDAIADNWLALRGRLRPGASCAGVVKANAYGLGARKVVPALLAAGCRDFVVAQIDE 70

Query: 68  GVKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           G+ +    P  AR+FVL G   G E  + D+ LIPV++S  Q+  ++K     G   P A
Sbjct: 71  GLDILDLLPADARLFVLSGPPEGAEDEVLDSALIPVLNSPDQIDRWAKACARAGRKAPAA 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L VDTG  RLGL+  E      +          L+++HLACAD+P   +N+ Q   F   
Sbjct: 131 LHVDTGMRRLGLTPLELDALLADPRPLAAFTPVLVMTHLACADEPDHPLNAEQRALFAAA 190

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + + G+ ASLA++SGI LGP +HF L RPGI LYGG   +  ++PM+ VV  + +I+ +
Sbjct: 191 AARFPGLRASLANTSGIFLGPEWHFDLARPGIGLYGGNPTVGTANPMRQVVKLQGKILQV 250

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+      V YG        S IA   +GYADG+P +                 G + G 
Sbjct: 251 RRIDTPLSVGYGATHTAPAGSTIATVGVGYADGFPRSAGNRAM-----------GLLAGR 299

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
            VP++G+++MD+  FD++D        G  I + GPD+ +D +A  + T +Y++L R+G 
Sbjct: 300 SVPVVGRVSMDLLTFDVSDVPENLARPGAMIDLLGPDLSVDALADRADTVSYEILTRLGA 359

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 360 RYPRRY 365


>gi|150391836|ref|YP_001321885.1| alanine racemase [Alkaliphilus metalliredigens QYMF]
 gi|149951698|gb|ABR50226.1| alanine racemase [Alkaliphilus metalliredigens QYMF]
          Length = 391

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 167/381 (43%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+L  LK+N   +   ++ +    AVVK N YG G   IA  L + G     V 
Sbjct: 8   RPTWAEINLDHLKHNIREVKKVINKDTLLCAVVKANGYGHGVMTIAKTLLDHGADRLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           ++ E ++LR    Q    ++ G  P  Q ++I D N+I  I +  Q    +K+      S
Sbjct: 68  TLSEAIELRQGGYQDIPILVLGYTPETQGQVILDYNVIQTIYTYEQAKALAKIGKEQKKS 127

Query: 122 HPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L++DTG +RLG +  +  ++        +   +  I +H A AD+ +      Q  
Sbjct: 128 MTIHLKIDTGMSRLGFNCSQKTIEEIKQIIELEYINVEGIYTHFAVADEKNKDYTKFQFN 187

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PM 232
            F  L        Y+     +++S+ I+  P+ +  + R GI LYG     + +H    +
Sbjct: 188 CFMELTEELKKEGYQIPIRHVSNSAAIIDLPDMNLDMVRAGIMLYGLYPSPDVNHEAVQL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+  + R+  ++  L  + VSYG   K   +  I    IGYADG+   L         
Sbjct: 248 KQVMELKTRVAHVKNVLPQQGVSYGLTYKTKGEEKIITLPIGYADGFTRML--------- 298

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVAL 348
                 +  +KG   PI+G+I MD  M D T    IE GD + +F  D      +DD+A 
Sbjct: 299 --TDKAELILKGEKRPIVGRICMDQCMADATGI-EIEQGDVVTLFSNDPASGCSIDDIAR 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY+++  +G R  + Y
Sbjct: 356 KLNTINYEIVCMVGRRVPRAY 376


>gi|189218087|ref|YP_001938729.1| Alanine racemase [Methylacidiphilum infernorum V4]
 gi|259710070|sp|B3DWZ0|ALR_METI4 RecName: Full=Alanine racemase
 gi|189184945|gb|ACD82130.1| Alanine racemase [Methylacidiphilum infernorum V4]
          Length = 387

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 170/373 (45%), Gaps = 18/373 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++    ++ID  AL+ N            +  AVVK  AYG G   IA  L ++GV+   
Sbjct: 13  AHPRSWVEIDGRALRFNIRVARERIPKKTKIIAVVKSEAYGHGLIPIAKELVHSGVEVLG 72

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
           + +++E ++LR    ++ + +L  I P +  II   N+  VISS  +  + S+     G 
Sbjct: 73  INNIDEAIELRQAGIRSALLILCPILPSEASIIVSYNVGVVISSYNEAKWLSQAAERQGK 132

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                +++DTG  RLG    + +             ++ I +H + A +        Q  
Sbjct: 133 KAIVHIKIDTGMGRLGFIPSQFIQEMEKIKRLSSLSIAAICTHFSQA-ETDIEATEKQWL 191

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                  ++KG+   +A+S+ +     Y     R G++LYG          ++ ++T + 
Sbjct: 192 ELLKFRHYFKGLPIHVANSAALWRKSVYACDYVRIGLALYGIAPMPFLRRFLKPILTWKC 251

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I+LI++   G  +SYG   KL + S IAV ++GY DGY  +LS                
Sbjct: 252 KIVLIKELPRGHPISYGATYKLKKPSRIAVLSVGYGDGYCRSLSN-----------KASV 300

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYD 356
            IKG   P+ G ITM++ M DITD  S +VGD   + G      I  D++A  S T +Y+
Sbjct: 301 LIKGKRCPVRGAITMNLLMVDITDLPSCKVGDEAVLLGTQGKESITADELAKLSQTISYE 360

Query: 357 LLVRIGTRYAKFY 369
           ++  I +   + Y
Sbjct: 361 IITNIHSHIRRNY 373


>gi|34580918|ref|ZP_00142398.1| alanine racemase [Rickettsia sibirica 246]
 gi|28262303|gb|EAA25807.1| alanine racemase [Rickettsia sibirica 246]
          Length = 355

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 123/365 (33%), Positives = 183/365 (50%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL  A  + FFV S EEG
Sbjct: 6   VEINLSTIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEANCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRNALGLDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG              VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPLTK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI    
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINSRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+++MD+   D+TD    E+  G   +I G     D +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTNLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRKY 353


>gi|197119823|ref|YP_002140250.1| alanine racemase [Geobacter bemidjiensis Bem]
 gi|254802364|sp|B5EBG2|ALR_GEOBB RecName: Full=Alanine racemase
 gi|197089183|gb|ACH40454.1| alanine racemase [Geobacter bemidjiensis Bem]
          Length = 379

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 113/389 (29%), Positives = 176/389 (45%), Gaps = 32/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S     ++IDL AL++N+  +           AVVK +AYG G + ++  L   GV  
Sbjct: 1   MDS-RPTVVEIDLAALRHNFSLVQKRVPEGCGLLAVVKADAYGHGFQYVSEELEKLGVDA 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV---PQLTFYSKLM 116
           F V  + EGV+LR+      + +L GI+PG+E+     N+   + S+     L   +  +
Sbjct: 60  FAVAFLAEGVQLRMSGITRPVLILGGIYPGEERRCIGLNISTALFSLEQAAALDQAALEI 119

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--- 173
            C       L+VDTG  RLG+   E  +F       K  +L  I SH A AD+       
Sbjct: 120 KCYRKAHIHLKVDTGMGRLGVPYHEVPEFLAKLKQFKNLELEGIFSHFASADELDPEGIA 179

Query: 174 VNSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--I 226
              +Q ERF   +       Y      +A+S+ IL     +  L RPGI LYG       
Sbjct: 180 FTKLQAERFNAAVEEARRQGYAPTYVHVANSAAILTQDLPYCNLARPGIILYGALPSGDF 239

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
               P Q V+  ++R+ +++    G  +SYG +      +LIA   +GYADGY  +L+  
Sbjct: 240 EGQVPSQPVMRLKSRVAMLKWVEPGTSISYGRRYVAAERALIASVPVGYADGYCRSLTN- 298

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----I 341
                      G+  I+G    + G + MD  M D+T+   + VGD + + GPD     I
Sbjct: 299 ----------KGEALIRGQRAKVAGTVCMDWIMLDVTNVKGVAVGDDVTLLGPDPMGDCI 348

Query: 342 KLDDVALASGTTNYDLLVRI-GTRYAKFY 369
             +++A  +GT  Y++L  I   R  + Y
Sbjct: 349 SAEEMAEKAGTIPYEVLCGIATRRVRRVY 377


>gi|270263327|ref|ZP_06191597.1| hypothetical protein SOD_d03440 [Serratia odorifera 4Rx13]
 gi|270043015|gb|EFA16109.1| hypothetical protein SOD_d03440 [Serratia odorifera 4Rx13]
          Length = 359

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 174/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +   +  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRQAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +        P  +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFCAEDLPVLVANNIETAVHSIEQLEALEQTELARPVPVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  + + Q   I+SH + AD+P S     Q++ F + 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACRNVAQPVNIMSHFSRADEPDSDATLKQMQCFESF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
           +    G + S+A+S G LL P+ H    RPGI LYG +   +       +Q  +T ++ +
Sbjct: 182 VRGKPG-QRSIAASGGTLLWPDAHNDWVRPGIILYGVSPMEDACGSQFDLQPAMTLKSNL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE V YGG      D+ + V A+GY DGYP +              G   ++
Sbjct: 241 IAVRDHKAGEAVGYGGTWVSEGDTRLGVVAMGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VP++G+++MDM   D+  + + +VGD + ++G  + ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVPVVGRVSMDMISVDLGPNATDKVGDEVVLWGKALPVERIAACTGISAYELITKLT 349

Query: 363 TRYAKFY 369
            R A  Y
Sbjct: 350 QRVAMEY 356


>gi|313899530|ref|ZP_07833039.1| alanine racemase [Clostridium sp. HGF2]
 gi|312955637|gb|EFR37296.1| alanine racemase [Clostridium sp. HGF2]
          Length = 388

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 100/390 (25%), Positives = 166/390 (42%), Gaps = 31/390 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + SN    L+IDL  + +N   +  L  +  +  A+VK N YG G  + +  +   G+  
Sbjct: 8   LKSNTRSWLEIDLNRISHNIKEVQKLIPSTSKIMAIVKANGYGHGDVECSRMMEQQGIDF 67

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V+SV+EGV+LR    Q+ I VL    P     + + +LI  + S       +      
Sbjct: 68  FGVSSVDEGVRLRENGIQSPILVLGYTPPVHFHYLNEASLIQTLVSKEYAEKLNAYAKEQ 127

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA------CADDPSS 172
            V      +VDTG +R+G+  Q+      +       +   +    +      C D+ + 
Sbjct: 128 NVVVKAHAKVDTGMSRIGIIAQDHAYHIEDIKALYRLEYLDVCGIFSHFSVSDCLDEENC 187

Query: 173 HVNSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
              + Q+  F  +++  +          L +S GIL  PN H+   RPG+   G T    
Sbjct: 188 AFTNHQIALFERVLADLRAEGIDPGTTHLQNSYGILNYPNLHYDYVRPGLLWMGVTSDDA 247

Query: 228 KSHP----MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
            +       Q ++  +A + L++    G  VSYG   K    + +A  A+GYADG+P ++
Sbjct: 248 LAIRTAPQFQPIMEWKANVSLVKDIQPGVTVSYGRHFKAEVCTRVATLAVGYADGFPRSV 307

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S            G    + G  VPI+G I MD  M DIT    +  GD   + G D   
Sbjct: 308 SNQ----------GACVLLHGRRVPIIGNICMDQMMVDITGLDGVSEGDVATLIGCDGDE 357

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + +D+++  + T N + L  I  R  + Y
Sbjct: 358 VLSVDELSRLAHTINNETLCWISQRVPRIY 387


>gi|163786834|ref|ZP_02181282.1| alanine racemase [Flavobacteriales bacterium ALC-1]
 gi|159878694|gb|EDP72750.1| alanine racemase [Flavobacteriales bacterium ALC-1]
          Length = 368

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 162/378 (42%), Gaps = 21/378 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M   +   L+IDL+AL +N++ +   L+   +  AVVK  AYG    +IA  L +  V  
Sbjct: 1   MSKAQETILEIDLSALTHNFNYLKSKLNAKTKFLAVVKAFAYGSDSIEIAKHLQSLEVDY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V   +EGV LR       I VL+   P   K I +  L P I S   L  +  +    
Sbjct: 61  FAVAYAKEGVVLRDAGITTPIIVLHP-QPVNFKTIIERCLEPSIYSAKVLNEFIAVAETE 119

Query: 119 -GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
              ++P  ++ +TG NRLG    +           K      + SHLA ++D       +
Sbjct: 120 SQTNYPVHIKFNTGLNRLGFWENDVEYIVSKLRVTKSIVAKSLFSHLAVSEDINEEEFTN 179

Query: 177 VQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
           +Q++ F+ +   +       I   L ++SG++  P+ H  + R GI LYG  + + +   
Sbjct: 180 LQVQNFKQIAKEFESKIGYKIWLHLCNTSGVINYPDTHLDMVRCGIGLYGFGNSVKEDQY 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ + + ++ I  I K   GE V Y    K      IA   IG+ADG             
Sbjct: 240 LKPIASLKSVISQIHKIEKGETVGYNRAYKAKGFEKIATVPIGHADGINRIYGNG----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G   I      I+G + MDM M +IT+      GD + IF  + K    A ++ 
Sbjct: 295 -----NGFVIINSKKAQIIGNVCMDMIMVNITNI-DCNEGDEVIIFNTNHKASKFAESAN 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y++L  I  R  + +
Sbjct: 349 TISYEILTSISQRVKRVF 366


>gi|255308493|ref|ZP_05352664.1| alanine racemase [Clostridium difficile ATCC 43255]
          Length = 385

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 153/376 (40%), Gaps = 24/376 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +I+L  L+ N +++  L   + +   V+K +AYG G  ++A  L    V    V  
Sbjct: 7   PTWAEINLDNLRFNLNNIKNLLEEDIKICGVIKADAYGHGAVEVAKLLEKEKVDYLAVAR 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
             EG++LR       I  L        +      +   + S+      +++    G    
Sbjct: 67  TAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKAC 126

Query: 124 YALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++D+G  R+G    E ++         +   L  + +H A AD+ S      Q   +
Sbjct: 127 VHVKIDSGMTRIGFQPNEKSVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNY 186

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
           + +               +++S+ I+  P+    + R GI LYG     +       ++ 
Sbjct: 187 KFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKDRLELRP 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  +++I  I++   G  +SYG +   T    IA   IGYADG+               
Sbjct: 247 AMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIATVPIGYADGFTRIQKNP-------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTT 353
               K  IKG +  ++G+I MD  M  I   + I+VGD + +FG  ++  + +A   GT 
Sbjct: 299 ----KVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKDLGTI 354

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  I  R  + Y
Sbjct: 355 NYEVLCMISRRVDRVY 370


>gi|326777201|ref|ZP_08236466.1| Alanine racemase [Streptomyces cf. griseus XylebKG-1]
 gi|326657534|gb|EGE42380.1| Alanine racemase [Streptomyces cf. griseus XylebKG-1]
          Length = 408

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 160/381 (41%), Gaps = 29/381 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N   +   +  A+  AVVK + YG G    A A   AG       + 
Sbjct: 24  RARAEIDLAALRANVRVLRERAAGAQLMAVVKSDGYGHGAVPCARAAREAGATWLGTATP 83

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR      RI        G  +   + ++   +  +       +     G +   
Sbjct: 84  QEALALRAAGLDGRIMCWLWTPGGPWREAIEADIDVSVGGMWALREVVAAAAEAGRTARI 143

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G    +  +    +   +      +    SH ACAD+P     + QL  
Sbjct: 144 QLKADTGLGRGGCQPADWPELVGEALAAERAGRVEVTGLWSHFACADEPGHPSIAAQLAV 203

Query: 182 FRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           +R L+  +  +G+E     LA+S   L  P  HF L R GI++YG +            +
Sbjct: 204 YRDLVAYAEKEGVEPEVRHLANSPATLTIPEAHFDLVRTGIAMYGVSPAPELGTSADLGL 263

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A + L++ A AG  +SYG     T  + + +  +GYADG P   SG       
Sbjct: 264 RPVMTLAASVALVKDAPAGHGISYGHHYTTTAGTTLGLIPVGYADGVPRHASGT------ 317

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   + G +  + G++ MD  + D+ D    E G    +FGP    +    D A 
Sbjct: 318 -----GPVLVGGKVRRVAGRVAMDQFVVDL-DGDRPEAGAEAVLFGPGDRGEPTAQDWAE 371

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           A+GT  Y+++ RIGTR  + Y
Sbjct: 372 AAGTIAYEIVTRIGTRVPRVY 392


>gi|154684967|ref|YP_001420128.1| hypothetical protein RBAM_004980 [Bacillus amyloliquefaciens FZB42]
 gi|154350818|gb|ABS72897.1| Alr [Bacillus amyloliquefaciens FZB42]
          Length = 389

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 162/384 (42%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M++  F R    +I+L+A+K N   M    G N    AVVK NAYG G  ++  A   AG
Sbjct: 1   MNTASFYRETWAEINLSAIKENVTHMKKHIGQNVHLMAVVKANAYGHGDLEVGKAALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL  + P   +   + ++     SV  L   ++ +
Sbjct: 61  ASCLAVAILDEAISLRKRGITAPILVLGAVPPEYVQAAAEYDVTLTGYSVEWLQEAARHL 120

Query: 117 SCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               + P+ L+VDTG NRLG+   +E                  + +H A AD+ +    
Sbjct: 121 GSA-TVPFHLKVDTGMNRLGVKTEEEIQSVLKILSQNPGLVCKGVFTHFATADEKNRDYF 179

Query: 176 SVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
             Q +RF+TLI+      +    A+S+  L      F   R GIS+YG     +    + 
Sbjct: 180 LFQFDRFKTLIAPLPLKELMVHCANSAAGLRLKKGFFNAVRFGISMYGLRPSADIQSEIP 239

Query: 234 TVVTA----EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +       + +  ++K   GE VSYG      +D  I    IGYADG+   LS     
Sbjct: 240 FQLKPAFALHSVLSHVKKIRKGESVSYGATYTAEKDQWIGTVPIGYADGWLRKLS----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  G    I G  + I G+I MD  M ++  S     G  + + G      I +D+
Sbjct: 295 -------GTSVLIGGKRMNIAGRICMDQLMVELDQSYP--PGTKVTLIGSQKEETITMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY++   I +R  + +
Sbjct: 346 IAGRLGTINYEVPCTISSRVPRMF 369


>gi|284048796|ref|YP_003399135.1| alanine racemase [Acidaminococcus fermentans DSM 20731]
 gi|283953017|gb|ADB47820.1| alanine racemase [Acidaminococcus fermentans DSM 20731]
          Length = 389

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 157/386 (40%), Gaps = 29/386 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S       +IDL AL  N+H +        +   VVK +AYG G  ++   L   G  
Sbjct: 1   MKSTLRRTWAEIDLDALAYNYHKIREHIGPQVKFLGVVKADAYGHGAVQVGSHLQALGAN 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD-TNLIPVISSVPQLTFYSKLMS 117
              V+S++E ++LR       I +L      Q   +        V      L +  + + 
Sbjct: 61  YLAVSSIDEAMELRFNGITMPILILGHTPREQVDRLICFNITQAVTCEAKALEYSEEAVK 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDF-----THNSFNKKLGQLSLIISHLACADDPSS 172
            G +    ++VDTG +RLG   +            ++ +    +   I +H A AD+P  
Sbjct: 121 YGGTLKIHVKVDTGMSRLGYICEGDYFEHGVEGIIHACSLPGLEPEGIFTHFAVADEPGE 180

Query: 173 H---VNSVQLERFRTLISHYKGIE------ASLASSSGILLGPNYHFQLTRPGISLYGGT 223
                   Q   FR +    +            A++    L P+ +  + RPG+ LYG  
Sbjct: 181 DALAYTRHQFALFRKVCDEVEKRTGKKFKLRHCANTGATTLFPDTYLDMVRPGLLLYG-Y 239

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
            +  +   ++ V+T +  I  I+    G  +SYGG       + + VA IGYADG+   L
Sbjct: 240 GEHARMLGLKPVMTVKTTISTIKIYPKGTKISYGGIYTCPDTTRMGVAPIGYADGFMRCL 299

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL 343
           S   S  +                P  G+I MDM M D+T    ++VG  +++FG    L
Sbjct: 300 SNRCSFVTEEG-----------PAPQRGRICMDMCMVDLTGKPKVDVGSELELFGTRQSL 348

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           DD+A  +GT  Y++   I  R  + Y
Sbjct: 349 DDLAQLAGTIPYEITCNISKRVPRVY 374


>gi|329938191|ref|ZP_08287642.1| alanine racemase [Streptomyces griseoaurantiacus M045]
 gi|329302680|gb|EGG46570.1| alanine racemase [Streptomyces griseoaurantiacus M045]
          Length = 387

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 33/389 (8%)

Query: 1   MHSNE----FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M ++E      R +IDL AL+ N  ++ A +  A+  AVVK +AYG G    A A   AG
Sbjct: 1   MKTSEAAPLRARAEIDLAALRANVRALRAHAPGAQLMAVVKADAYGHGALPCARAALAAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKL 115
            +     + EE + LR      RI        G  +   + +L   +S +       +  
Sbjct: 61  ARWLGTATPEEALALRAAGIPGRIMCWLWTPGGPWREAVEADLDLGVSGLWALREVTAAA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSS 172
            + GV     L+ DTG  R G S  +  +    +   +   L +++ + SHLACAD+P  
Sbjct: 121 RAAGVPARVQLKGDTGLGRNGCSPADWPELVAEALRAEAAGLLRITGLWSHLACADEPGH 180

Query: 173 HVNSVQLERFRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
                QL RFR ++  +  +G+      +A+S   L  P+ HF L R GI++YG +    
Sbjct: 181 PSVVPQLARFREMVGYAEERGVRPEVRHIANSPAALTLPDSHFDLVRTGIAMYGLSPSPE 240

Query: 228 ----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++ V+T  A + L++    G  VSYG       D+ + +  +GYADG P   
Sbjct: 241 LGAPADFGLRPVMTLAASLALVKHVPGGHGVSYGHHYVTPGDTTLGLVPLGYADGIPRHA 300

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---- 339
           SG            G   + G    + G++ MD  + D+       VG    +FGP    
Sbjct: 301 SG-----------AGPVLVGGKWRTVAGRVAMDQFVVDLGGDEPP-VGAEAVLFGPGDRG 348

Query: 340 DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +   +D A A+GT  Y+++ RIGTR  + 
Sbjct: 349 EPTAEDWAQAAGTIAYEIVTRIGTRVPRV 377


>gi|239980001|ref|ZP_04702525.1| alanine racemase [Streptomyces albus J1074]
          Length = 402

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 157/383 (40%), Gaps = 32/383 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R++IDL AL+ N  ++ A +  A   AVVK +AYG G  + A A   AG     V + 
Sbjct: 2   RARVEIDLGALRANVRALRARTDGAAYMAVVKADAYGHGMVRCAEAALQAGATWVGVATP 61

Query: 66  EEGVKLRLYTPQ---ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVS 121
            E ++LR        AR+        G  +   + +L   +S +  L        + G  
Sbjct: 62  YEALELRAAGVTPERARVMCWLWTPGGPWREGIEADLDMSVSDLWALAEVTEAARATGRR 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQ 178
               L+ DTG  R G    +  D    +   +   L  +    SH ACAD+P     + Q
Sbjct: 122 ARIQLKADTGLGRNGCQPADWADLVDRARAAEREGLVTVTGLWSHFACADEPGHPSIAAQ 181

Query: 179 LERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
           L RF  +               +A+S  +L  P   F L RPGI++YG +          
Sbjct: 182 LARFDEMSGRAYAGGLRPEVRHMANSPAVLTLPEARFDLVRPGIAMYGLSPAPELGTPAD 241

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
           H ++ V+T  A + L++    G  VSYG        + + +  +GY DG P   SG    
Sbjct: 242 HGLRPVMTLAAPLALVKHVPGGHGVSYGHHYVTAGPTTLGLVPLGYGDGVPRHASG---- 297

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G   + G    + G+I MD  + D+      E G    +FGP    +   +D
Sbjct: 298 -------AGPVLVDGKWRTVAGRIAMDQFVVDLGGETPPE-GTEAVLFGPGDRGEPGAED 349

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
            A A+GT  Y+++ RIG R  + 
Sbjct: 350 WARAAGTIGYEIVTRIGGRVPRV 372


>gi|221133975|ref|ZP_03560280.1| alanine racemase [Glaciecola sp. HTCC2999]
          Length = 367

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 112/378 (29%), Positives = 178/378 (47%), Gaps = 28/378 (7%)

Query: 6   FLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             R     ID+ AL +N+H     +  ++T AV+K + YG G  KIA  L +     F V
Sbjct: 1   MPRQTIAHIDINALLHNYHQAKNAAPQSQTMAVIKADGYGHGMLKIAQCLADV-ADGFAV 59

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFY----SKLMS 117
             ++E +  R       I VL G   P    +  D +L  V+    Q+ +     + L  
Sbjct: 60  AFIDEAIACRDAGLTQPILVLEGAHSPEDIVLAVDYDLWLVMHQPEQIDWLVEFDATLSV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                    + DTG +RLGLS  E         ++ L     ++ H ACADD S+ +N+ 
Sbjct: 120 DETKPTVWFKCDTGLHRLGLSPNELETALRRVPSEYLDNAV-LMGHFACADDLSNPMNAH 178

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-----KINKSHPM 232
           QL +    +++   +  S+A+S  I+   + H Q  R GI+LYG         +  +  +
Sbjct: 179 QLTQLND-LANRYQLPISMANSPAIVADTDSHGQWNRLGIALYGAEPLNRSSAVQSNVVL 237

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A II +R+   G+ V YG   +  R S+IA  AIGY DGYP            
Sbjct: 238 KPVMTLTAAIIGLRQIQPGDAVGYGQTWQAQRPSMIATVAIGYGDGYPRHA--------- 288

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSI-EVGDYIQIFGPDIKLDDVALASG 351
               G   F++G  VP++G+++MDM   D+TD   +  +GD ++++G ++ +  VA    
Sbjct: 289 --PSGTPVFLQGQTVPLVGRVSMDMITVDVTDLSQVPNIGDMVELWGANLSVTTVAAHIN 346

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+L+ RI  R  K Y
Sbjct: 347 TINYELVTRISPRVTKTY 364


>gi|50122586|ref|YP_051753.1| alanine racemase [Pectobacterium atrosepticum SCRI1043]
 gi|123614469|sp|Q3V7N2|ALR_ERWCT RecName: Full=Alanine racemase
 gi|49613112|emb|CAG76563.1| alanine racemase, biosynthetic [Pectobacterium atrosepticum
           SCRI1043]
          Length = 360

 Score =  280 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 107/374 (28%), Positives = 172/374 (45%), Gaps = 23/374 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       I+  AL++N   +  L+  ++  AVVK NAYG G  + A    +     +
Sbjct: 1   MKT---ATAVINRRALRHNLQRIRQLAPGSQIVAVVKANAYGHGMIESAHTFCD--ADCY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  + E + LR       I +L G     +  ++ +  L   + S+ QL    +  +  
Sbjct: 56  GVARLSEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSLEQLAALEQ-ATLP 114

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 +++DTG +RLG+  + A  F    +  + + Q   I+SH   AD+P +     Q
Sbjct: 115 QPIRVWMKLDTGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQ 174

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
           L  F        G + S+A+S GILL P  H    RPGI LYG +   N+       Q  
Sbjct: 175 LACFDAFTQGKPGAQ-SIAASGGILLWPQAHRDRVRPGIILYGVSPLDNEDAAHFGFQPA 233

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  + +I +R+  AGE V YGG     RD+ + V A+GY DGYP               
Sbjct: 234 MTFTSHLIAVREHKAGETVGYGGTWTSPRDTRLGVVAVGYGDGYPR-----------CAP 282

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    I G  VP+ G+++MDM   D+      +VGD + ++GP + ++ +A  +G + Y
Sbjct: 283 AGTPVLINGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGPTLSVERIAAHTGASAY 342

Query: 356 DLLVRIGTRYAKFY 369
           +L+ R+  R A  Y
Sbjct: 343 ELITRLTQRTALEY 356


>gi|126207740|ref|YP_001052965.1| alanine racemase [Actinobacillus pleuropneumoniae L20]
 gi|166919545|sp|A3MYX4|ALR_ACTP2 RecName: Full=Alanine racemase
 gi|126096532|gb|ABN73360.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
          Length = 374

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISREALRHNIELIKTFAPQQKLLAMIKANAYGQGLLPAADTLADL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVIS------------SVP 107
           + E ++++      +I ++ G    +E        FDT +                    
Sbjct: 61  LREALEIQETGYTGKILLIEGFFDREELLKTLSRRFDTVIHCQEQLELLEQVAEEWQQEQ 120

Query: 108 QLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
           Q  F+ +           L++DTG +RLG+  ++   F        L +    +SH + A
Sbjct: 121 QKGFWKRKAKIYFPINVWLKIDTGMHRLGVHPEQVDMFYQRLKACPLVESISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+P       Q+  F    S Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DEPDCGYTEKQIAIFEAATSPYPTHERSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGTWISDKDTKLGVVAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G +VPI+G+++MDM   D+      +VGD +  +G D+ +++
Sbjct: 299 ---------PEGTPVLVNGRIVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIEE 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAQHIGVISYELITKLTPRV 369


>gi|332304651|ref|YP_004432502.1| alanine racemase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332171980|gb|AEE21234.1| alanine racemase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 375

 Score =  280 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 180/382 (47%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN----------ARTAAVVKDNAYGLGCEKIAPALYN 54
             + + +DL A+++N++   +L             ++T AV+K +AYG G    A AL +
Sbjct: 3   RPISITVDLNAIRHNFNYAQSLGAKPKNGDSLDNVSQTMAVIKADAYGHGAVATARAL-D 61

Query: 55  AGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK 114
                  V+S+EE V LR    +  I +L G     E  + D   + V+           
Sbjct: 62  GKATLLAVSSIEEAVSLRQNHIKTPILLLEGCFCSSELSVLDDLNLQVVLHNQHQIEELL 121

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
             S        L++DTG +RLG+S  +A        N K  +  ++++H A +D P+   
Sbjct: 122 NTSLDEPADVWLKIDTGMHRLGISAADANHTYQTLANSKNVRSIVLMTHFAMSDQPNHTF 181

Query: 175 NSVQLERFRTLISH----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
              Q E F  L+       + I  S A+S+ ++  P  H    RPGI LYG +   +++ 
Sbjct: 182 FKRQHEDFHNLVKALSTTDQLIPNSAANSAAVMSAPESHGTWNRPGIMLYGISPFDHENT 241

Query: 231 ---PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
              P+   +   ++II +R+  AGE V YG     T+ S+IA  A GY DGYP       
Sbjct: 242 FSAPLIPAMQFHSKIIALRQVNAGESVGYGATWTATQPSIIATVAAGYGDGYPR------ 295

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVA 347
                +   G    I G + P+ G+++MDM   D+T    +++GD ++++G ++ +++VA
Sbjct: 296 -----TAKSGTPVMINGQIAPLAGRVSMDMLCVDVTKLNKVKIGDDVELWGKELSVNEVA 350

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             + T  Y+L+ R+ TR  + +
Sbjct: 351 QWADTLGYELVTRMPTRAKRIF 372


>gi|317492318|ref|ZP_07950747.1| alanine racemase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919657|gb|EFV40987.1| alanine racemase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 356

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  IDL+AL +N   +   +  A+  +VVK NAYG G  +I  AL       F +  
Sbjct: 3   RPIRATIDLSALTHNLDQIRQQTPEAKIWSVVKANAYGHGLSRIWRALAK--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    Q  I +L G    Q+  + D   +                        
Sbjct: 61  IEEAILLREQGWQGPILLLEGFFQPQDLQLIDRYRLTTTIHNESQLQILGRARLSAPVDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V+TG +RLG   ++ +   H++          +++H A AD+         L  F  
Sbjct: 121 YLKVNTGMHRLGFMPEQLMAIYHSARALPNVDHITLMTHFANADNHLG--VESPLAAFNA 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
                      LA+S+  L     H    RPGI LYG +            ++ V++  +
Sbjct: 179 AAVDISA-PRCLANSAATLWHQPTHADWVRPGIVLYGASPTGRWHDIAESHLRPVMSLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I+   +G+ V YG + +  +   I + A GYADGYP                G   
Sbjct: 238 EIIAIQNIQSGDSVGYGSRYQAVQPQRIGIVACGYADGYPRHA-----------LSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G    +LG ++MDM   D+T    ++VG+ ++++G ++ +DDVA ++GT  Y+LL  
Sbjct: 287 WVSGQRTQLLGTVSMDMLAIDLTALPEVQVGESVELWGQNLPVDDVAQSAGTIGYELLCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|114319749|ref|YP_741432.1| alanine racemase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226143|gb|ABI55942.1| alanine racemase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 365

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 160/367 (43%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R +I L AL++N+  + + +  AR  AV+K + YG G +++A  L       F V+ 
Sbjct: 6   RPTRARIRLEALRHNYRLLRSSAPGARVMAVIKADGYGHGIDRVARTLAGE-ADCFAVSG 64

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           V+E + +R       + +L G     +  +       PV+ S  Q+   +       S  
Sbjct: 65  VDEAMPIRAAGATQPVVLLGGFFAAAEIPLHVREGFQPVVHSWWQVEALAS-AGPHESLD 123

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VD+G +RLG    E  +           +    ++HLA ADD  S     QL  F 
Sbjct: 124 VWIKVDSGMHRLGFLPGEVAEVHRRLTALPNLRQIGFLTHLAEADDRDSPRTLEQLRVFD 183

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEA 240
              +   G   S A+S+G L  P  H+   RPGISLYG +  I++  P      V+T E+
Sbjct: 184 QACAGLPG-PRSAANSAGTLGWPAAHYDWVRPGISLYGASPFIDQGRPRPDLRPVMTLES 242

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +++  AG  + YG   +      + V AIGY DGYP                G   
Sbjct: 243 GLISVKRLPAGAPIGYGSTWRCPEAMPVGVVAIGYGDGYPRHA-----------PSGTPV 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG+++MD+   D+        G  + ++G  +  + +A  +GT  Y+L  +
Sbjct: 292 RVDGVESQLLGRVSMDLITVDLRPCPEARPGAPVVLWGDGLPAETIAERAGTIAYELYCQ 351

Query: 361 IGTRYAK 367
           +  R  +
Sbjct: 352 VTPRAPR 358


>gi|148243246|ref|YP_001228403.1| alanine racemase [Synechococcus sp. RCC307]
 gi|147851556|emb|CAK29050.1| Alanine racemase [Synechococcus sp. RCC307]
          Length = 395

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/371 (29%), Positives = 173/371 (46%), Gaps = 24/371 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   L+ID  A++ N   +  +LS      AVVK + YG G   +A A  + G   F V
Sbjct: 20  QQRAWLEIDRDAIRYNTAQLKGSLSPGCALMAVVKADGYGHGAVTVAEAALDGGASSFGV 79

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
            ++ EG++LR    +A I VL     P + +      L P ISS+ Q    S +    G 
Sbjct: 80  ATLAEGIELRQAGIEAPILVLGNLQQPEEFRCCLHWQLSPTISSLRQGLIGSNVGVAGGK 139

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++DTG  RLG+  Q+               ++ + SHLA AD+P   +N+ Q E
Sbjct: 140 PLLAHLKLDTGMARLGIDWQQGPKLLEELQQLDGLSIAGVYSHLADADNPDGLLNATQQE 199

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-KSHPMQT 234
           RF  ++  +  +E       LA+S+G L  P  H+ + R G+SLYG +   + K  P++ 
Sbjct: 200 RFEAVLRRFHELELKPGLRHLANSAGTLSSPELHYDMVRVGLSLYGHSPAAHLKQLPLRP 259

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  A++ L+R   AG  VSYG Q   TR S +AV  IGYADG    LSG         
Sbjct: 260 AMSVHAKVTLLRDVPAGAGVSYGHQFHTTRPSRLAVLGIGYADGVSRRLSGQM------- 312

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
               +   +G  +P +G ITMD  + D TD   +++GD + + G      I     +   
Sbjct: 313 ----EVLAEGRRLPQVGAITMDQIVIDATDLPELDIGDSVTLLGSSGSETIGPQAWSDVC 368

Query: 351 GTTNYDLLVRI 361
            +  +++L   
Sbjct: 369 QSIPWEVLCSF 379


>gi|254252040|ref|ZP_04945358.1| Alanine racemase [Burkholderia dolosa AUO158]
 gi|124894649|gb|EAY68529.1| Alanine racemase [Burkholderia dolosa AUO158]
          Length = 356

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG S ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYSPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G    LA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAG-TRCLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQSIAKGQSIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|253702117|ref|YP_003023306.1| alanine racemase [Geobacter sp. M21]
 gi|259710067|sp|C6E5Z6|ALR_GEOSM RecName: Full=Alanine racemase
 gi|251776967|gb|ACT19548.1| alanine racemase [Geobacter sp. M21]
          Length = 379

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 114/389 (29%), Positives = 178/389 (45%), Gaps = 32/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S     ++IDL AL++N+  +           AVVK +AYG G + ++  L   GV  
Sbjct: 1   MDS-RPTVVEIDLAALRHNFSLVQKRVPEGCGLLAVVKADAYGHGFQYVSEELEKLGVDA 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV---PQLTFYSKLM 116
           F V  + EGV+LR+      + +L GI+PG+E+ +   N+   + S+     L   +  +
Sbjct: 60  FAVAFLAEGVQLRMSGITRPVLILGGIYPGEERRLIGLNISTALFSLEQAAALDQAALEI 119

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--- 173
            C       L+VDTG  RLG+   E  +F       K  +L  I SH A AD+       
Sbjct: 120 KCYRKAHIHLKVDTGMGRLGVPYHEVPEFLAKLKQFKNLELEGIFSHFASADELDPEGIA 179

Query: 174 VNSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--I 226
              +Q ERF   +       Y      +A+S+ IL     +  L RPGI LYG       
Sbjct: 180 FTRLQAERFNAAVEEARRQGYAPSYVHVANSAAILAQDLPYCNLARPGIILYGALPSGDF 239

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
               P Q V+  ++R+ +++    G  +SYG +   T  +LIA   +GYADGY  +L+  
Sbjct: 240 EGQVPSQPVMRLKSRVAMLKWVEPGTSISYGRRYVATERALIASVPVGYADGYCRSLTN- 298

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----I 341
                      G+  I+G    + G + MD  M D+T+   + VGD + + GPD     I
Sbjct: 299 ----------KGEALIRGQRAKVAGTVCMDWIMLDVTNVKGVAVGDDVTLLGPDPMGDCI 348

Query: 342 KLDDVALASGTTNYDLLVRI-GTRYAKFY 369
             +++A  +GT  Y++L  I   R  + Y
Sbjct: 349 SAEEMAEKAGTIPYEVLCGIATRRVRRVY 377


>gi|34497370|ref|NP_901585.1| alanine racemase [Chromobacterium violaceum ATCC 12472]
 gi|34103226|gb|AAQ59589.1| alanine racemase [Chromobacterium violaceum ATCC 12472]
          Length = 356

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 162/368 (44%), Gaps = 17/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I L  L++N+    A  G+ R  AV+K NAYG G  + A AL +     F V  
Sbjct: 2   RPLIATIRLDHLRHNYLQARAAHGD-RALAVLKANAYGHGAVRCAQALADI-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR       I +L G+   +E    D + + +  +  +     +  +       
Sbjct: 60  LEEALELRAAGIANPILLLEGVFDAEELKAVDEHGLWMAVTSEEQLSMVEQSNPSRPFNV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +D+G +R G   +      H             ++H A AD+P   +   QLE F  
Sbjct: 120 WLMLDSGMHREGFLPENYHQAWHRLQASGKAGGITKMTHFARADEPEIPMTFAQLEAFDA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
            +      + S+A+S+GIL  P       R GI+LYG T       +   ++ V+   ++
Sbjct: 180 AVRGLPAGDESVANSAGILCHPRAQRNWGRVGIALYGVTPLPAGFGQGDALRPVMRFSSK 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  +R+   GE + YG      R + + + A GYADGYP   S            G    
Sbjct: 240 VFGVRELGVGEPIGYGDNFVTERPTRVGLVACGYADGYPRRAS-----------SGSPAL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    ++G+++MDM   D+TD  ++ VG  ++++G  + +++VA  +GT  Y+ L  +
Sbjct: 289 VDGQRTRLIGRVSMDMLTVDLTDLPAVGVGSEVELWGDGVSVNEVAAHAGTIGYEPLCNV 348

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 349 -KRARFVY 355


>gi|86748627|ref|YP_485123.1| alanine racemase [Rhodopseudomonas palustris HaA2]
 gi|86571655|gb|ABD06212.1| alanine racemase [Rhodopseudomonas palustris HaA2]
          Length = 388

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 130/373 (34%), Positives = 201/373 (53%), Gaps = 18/373 (4%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H +    L IDL A++ N+  +  +     R   VVK +AYGLG  ++APALY AG +DF
Sbjct: 5   HRHAGATLTIDLAAIRWNYRRLAEMVGPKVRCGGVVKADAYGLGARQVAPALYGAGCRDF 64

Query: 61  FVTSVEEGVKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
           +V  ++E + LR + P  A I VL G+  G E    D  ++PV++S+ QL  + +     
Sbjct: 65  YVAHLDEALDLRPHLPPDASIVVLNGLPRGGEDDCADAGIVPVLNSLAQLDDWSACARKA 124

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G      +Q+D+G +RLGLS +E  +   +    +   + L++SHLACAD      N+ Q
Sbjct: 125 GRVLGAIVQIDSGMSRLGLSPRELDEL--SHARLRGIDIRLVMSHLACADVADHAANAYQ 182

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
             RF  L   + GI  SLA+SSGI LGP++H+   RPG +LYG     ++ +PM+ VV  
Sbjct: 183 RARFCALADRFGGIPKSLANSSGIFLGPDFHYDAARPGAALYGINPTSSRPNPMRPVVRL 242

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A I+  R+  AG+ V YG   ++ R S +A  +IGYADG    L              G
Sbjct: 243 AAAIVQTREIEAGDHVGYGWDFRVERPSRLATLSIGYADGLHRALG-----------RAG 291

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYD 356
             + +G  + I G+++MD    D+ D  +  +  G  I++ GP   +D++A ASGT  Y+
Sbjct: 292 AVYFEGRALAIAGRVSMDSITVDLGDLPAERLGRGAEIELIGPHQSVDELASASGTIGYE 351

Query: 357 LLVRIGTRYAKFY 369
           +L  +G R+ + Y
Sbjct: 352 ILTSLGDRFRRIY 364


>gi|29831510|ref|NP_826144.1| alanine racemase [Streptomyces avermitilis MA-4680]
 gi|29608626|dbj|BAC72679.1| putative alanine racemase [Streptomyces avermitilis MA-4680]
          Length = 391

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 106/390 (27%), Positives = 164/390 (42%), Gaps = 33/390 (8%)

Query: 1   MHSNE----FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M + E      R +IDL AL+ N  ++ A +  A   AVVK +AYG G    A A   AG
Sbjct: 1   MTTRETAPLRARAEIDLAALRANVRTLRAHAPAAALMAVVKSDAYGHGAIPCARAAVEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKL 115
                  + EE + LR      RI     +  G  +   D ++   +S +          
Sbjct: 61  ATWLGTATPEEALALRAAGLPGRIMCWLWVPGGPWREAIDADIDLGVSGLWALREVVEAA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSS 172
              G      L+ DTG  R G   ++       +   +   L +++ + SHLACAD+P  
Sbjct: 121 AGAGAPARVQLKADTGLGRNGCQPEDWPGLVAEALRAEAAGLVRVTGLWSHLACADEPGH 180

Query: 173 HVNSVQLERFRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
                QL  FR ++  +  +G+      +A+S   L  P+ HF L R GI++YG +    
Sbjct: 181 PSIEAQLALFRQMVAYAERQGVRPEVRHIANSPATLTLPDSHFDLVRTGIAVYGISPSPE 240

Query: 228 ----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++ V+T  A + L++    G  VSYG        + + +  +GYADG P   
Sbjct: 241 LGVPADFGLRPVMTLAASLALVKHVPGGHGVSYGHHYVTPGATTLGLVPVGYADGIPRHA 300

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---- 339
           SG            G   I G    + G+I MD  + D+        G    +FGP    
Sbjct: 301 SGS-----------GPVLIGGKWRTVAGRIAMDQFVVDLGGDEP-GAGAEAVLFGPGDRG 348

Query: 340 DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +   +D A A+GT  Y+++ RIGTR  + Y
Sbjct: 349 EPTAEDWAKAAGTIAYEIVTRIGTRVPRVY 378


>gi|306832114|ref|ZP_07465268.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425553|gb|EFM28671.1| alanine racemase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 368

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   +  IDL A+  N  ++ A    + +  AVVK NAYG G   +A A+++  V
Sbjct: 1   MISSLHRPTKAVIDLDAICQNIDAVKANIPQDKKAFAVVKANAYGHGATSVAQAIHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  I P +  +  D ++   ++S   L   ++   
Sbjct: 60  DGFCVSNIDEALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQEWLDLANEQGI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   +  +    +  K    ++ I +H A AD+      + 
Sbjct: 120 SLAGLDVHLKVDSGMGRIGVRSLDEAENVIANLKKAGANVAGIFTHFATADEADDTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QLE F  L+++     A +   +S+  +      F L R GI +YG      +++  +P+
Sbjct: 180 QLEFFTNLVNNLSDKPAIVHASNSATSIWHSETIFNLVRLGIVMYGLNPSGTELDLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     + + L   +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGEFCEIVGRVSMDQITIRLPEKLP--IGTKVTLIGQEGSKAISATDLAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  + Y+
Sbjct: 346 KRGTINYEVLCLLSDRIPRVYS 367


>gi|288906075|ref|YP_003431297.1| alanine racemase [Streptococcus gallolyticus UCN34]
 gi|288732801|emb|CBI14377.1| Putative alanine racemase [Streptococcus gallolyticus UCN34]
          Length = 368

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 93/382 (24%), Positives = 173/382 (45%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   +  IDL A+  N  ++ A    + +  AVVK NAYG G   +A A+++  V
Sbjct: 1   MISSLHRPTKAVIDLDAICQNIDAVKANIPQDKKAFAVVKANAYGHGATSVAQAIHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  I P +  +  D ++   ++S   L   ++   
Sbjct: 60  DGFCVSNIDEALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQEWLDLANEQGI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   +  +    +  K    ++ I +H A AD+      + 
Sbjct: 120 SLAGLDVHLKVDSGMGRIGVRSLDEAENVIANLKKAGANVAGIFTHFATADEADDTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QLE F  L+++     A +   +S+  +      F L R GI +YG      +++  +P+
Sbjct: 180 QLEFFTNLVNNLSDKPAIVHASNSATSIWHSETIFNLVRLGIVMYGLNPSGTELDLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     + + L   +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGEFCEIVGRVSMDQITIRLPEKLP--IGTKVTLIGQEGSKVISATDLAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  + Y+
Sbjct: 346 KRGTINYEVLCLLSDRIPRVYS 367


>gi|163789953|ref|ZP_02184389.1| D-alanine racemase [Carnobacterium sp. AT7]
 gi|159874893|gb|EDP68961.1| D-alanine racemase [Carnobacterium sp. AT7]
          Length = 390

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/383 (24%), Positives = 157/383 (40%), Gaps = 26/383 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            S     ++I L  L +N  +    LS      AVVK + YG G  + A A   AG    
Sbjct: 4   ESYRETWVEIALDHLTDNIKAFKGILSPETALMAVVKADGYGHGAIETAKAAIEAGATYL 63

Query: 61  FVTSVEEGVKLRLYTPQARIFV--LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            V  ++E + LR       I V     +     ++  D  +   I S   +    KL   
Sbjct: 64  AVAFLDEAISLRKAGFSTPILVLGYTSLDTETIEMAIDYGITLTIYSKEAVESIQKLAIQ 123

Query: 119 GVS-HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L++D+G NR+G+   E       +          I +H + AD   S     
Sbjct: 124 KKKVCRIHLKIDSGMNRIGVRTAEEALQIIAAITSDYLVFEGIFTHFSDADAIESTFVHD 183

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SH 230
           Q   F  ++S  +            +++  +  P  H  + R GI +YG   + +     
Sbjct: 184 QFNHFMKIVSSIQKKGYTIPIKHCCNTAATIAFPKMHLDMVRIGIGIYGLYPEEHLRTKI 243

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+T + + ILI++   G+ +SYG     T+DS++A   +GYADG   TLS      
Sbjct: 244 SLKPVMTFKTKPILIKEVPVGQTISYGRTYTTTKDSIVATIPVGYADGLSRTLSN----- 298

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDV 346
                  G   + G+  PI+G++ MD TM D+T+   +   +   +FG      I + +V
Sbjct: 299 ------KGHITVNGHKAPIVGRVCMDQTMVDLTEIDPVYFNEEFVLFGDPLDGAISIGEV 352

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT +Y++   IG R  + Y
Sbjct: 353 ADQMGTIHYEVACLIGKRVPRIY 375


>gi|315122242|ref|YP_004062731.1| alanine racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
 gi|313495644|gb|ADR52243.1| alanine racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
          Length = 348

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 277/345 (80%), Positives = 305/345 (88%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           LSG ARTAAVVKDNAYGLG EKIA  LYN+GVQDFFV  V EGVKLR Y P+A+IFVLYG
Sbjct: 4   LSGCARTAAVVKDNAYGLGFEKIAQTLYNSGVQDFFVAHVGEGVKLRAYVPKAKIFVLYG 63

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
           IHPG+EKI+FD NLIPVISS  QLTFY KLMS G SHPYALQVDTGFNRLGLSLQEAL+F
Sbjct: 64  IHPGEEKILFDANLIPVISSSQQLTFYLKLMSNGFSHPYALQVDTGFNRLGLSLQEALNF 123

Query: 146 THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLG 205
             N  NKK  +LSLI+SHLAC++DP S +NS QLE+F TL+  YKGIEASLASS+GILLG
Sbjct: 124 AKNFSNKKSDKLSLIMSHLACSEDPVSLMNSSQLEQFLTLMKSYKGIEASLASSAGILLG 183

Query: 206 PNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD 265
            NYHFQLTRPGISLYGGT  INK +PMQTVVTAEARIILIR+A AGE++SYGGQKKL R+
Sbjct: 184 ENYHFQLTRPGISLYGGTPAINKLNPMQTVVTAEARIILIREAAAGEVISYGGQKKLKRN 243

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           SLIAVAAIGYADGYPLTLSG+D EH+ + F GGKGFIKGYMVPILGKITMD+TMFDITDS
Sbjct: 244 SLIAVAAIGYADGYPLTLSGIDLEHNQAQFPGGKGFIKGYMVPILGKITMDITMFDITDS 303

Query: 326 LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
           + IE GDYI++FGP+IKLDDVALAS TTNYDLLVRIGTRYA+FYT
Sbjct: 304 IGIEAGDYIEVFGPNIKLDDVALASRTTNYDLLVRIGTRYARFYT 348


>gi|260466737|ref|ZP_05812923.1| alanine racemase [Mesorhizobium opportunistum WSM2075]
 gi|259029467|gb|EEW30757.1| alanine racemase [Mesorhizobium opportunistum WSM2075]
          Length = 379

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 179/365 (49%), Gaps = 17/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A++ N+  + A  G  R A VVK + YGLG  ++A AL   G   FFV  + EG
Sbjct: 25  LTIDLGAIRENYRRLKAQLGGVRCAGVVKADGYGLGATQVASALMKDGCDTFFVALLAEG 84

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           + LR        I+VL G+ PG E       L  VI+S  QL  +       G   P A+
Sbjct: 85  ISLRKAIGAGPDIYVLNGLPPGSEPEAVAAGLCAVINSGAQLKAWRAAAHGAGRQLPAAI 144

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVD+G +RLG++  E      ++   +   +  + SHLACAD+P    N  Q   F  L 
Sbjct: 145 QVDSGMSRLGMAPAEVEAVVEDTGAFEGIDVRYVTSHLACADEPRHPANEQQRLAFERLR 204

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +      ASLA+SSGI LGP YH+ L RPG +LYG     + ++PM  VV  +A++   R
Sbjct: 205 ALLPAAPASLANSSGIFLGPRYHYDLARPGAALYGINPTPDATNPMLPVVGLQAKVAQTR 264

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG          +A  + GYADG+                     + +G  
Sbjct: 265 GIEKGTGVGYGHTYHAEGPRSLATISFGYADGWLRR-------------SASAAWFEGVR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +P LG+++MD  + D++      +  GD +++ GP   +DD A  +GT  Y++L  +GTR
Sbjct: 312 LPFLGRVSMDSIILDVSALSPGKLREGDLVELLGPAQSVDDAAGHAGTIGYEILASLGTR 371

Query: 365 YAKFY 369
           + + Y
Sbjct: 372 FHRRY 376


>gi|304392032|ref|ZP_07373974.1| alanine racemase [Ahrensia sp. R2A130]
 gi|303296261|gb|EFL90619.1| alanine racemase [Ahrensia sp. R2A130]
          Length = 378

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 135/363 (37%), Positives = 192/363 (52%), Gaps = 4/363 (1%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R+ IDL ALK N+  +  L+  A   AVVK N YG G E + PAL++AG + FFV    E
Sbjct: 12  RVTIDLDALKANYTHLAKLAAPAECGAVVKANGYGCGIEVVVPALWDAGCRTFFVAVSSE 71

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G+++    P AR F+L G+  G E  + D  LIP + SV Q+  ++      G   P A+
Sbjct: 72  GLRVMKTAPDARCFILNGLFTGAENALADAGLIPCLGSVTQIENWAATAKQRGTPLPCAI 131

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            +D+G NRLGLS  E               + L ++H ACADD        Q ERF    
Sbjct: 132 HMDSGMNRLGLSYDELARTVEQPHLMDHLDVQLFMTHYACADDIGHPQTEAQRERFLQGA 191

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
               G+  S A+S+  L   ++ F L RPGI+LYGG    +  +PM+ VVT E R++  R
Sbjct: 192 DLLPGVPRSAANSAADLQATDHTFDLARPGIALYGGEALNDVDNPMRPVVTLEGRVVQTR 251

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG  + +TR + +A  + GYADGY    S         V        KG+ 
Sbjct: 252 WVERGGAVGYGASETMTRRTRLAYVSTGYADGYHRAASNFGVPMRF-VAPAAVTHYKGHT 310

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +  +G+I+MD+  FD+TD     I  GD+I++FG ++ +DDVA A+GT  Y+LL  +G R
Sbjct: 311 LKGVGRISMDLAAFDVTDMPDDAIGEGDWIELFGNNVPVDDVARAAGTIGYELLTGLGAR 370

Query: 365 YAK 367
           YA+
Sbjct: 371 YAR 373


>gi|332291955|ref|YP_004430564.1| alanine racemase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332170041|gb|AEE19296.1| alanine racemase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 365

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 157/371 (42%), Gaps = 21/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            RL+IDL AL++N+  +    + + +  AVVK   YG     +A  L   GV  F V  V
Sbjct: 4   TRLEIDLAALRHNYSYLRKKVAPSVKMMAVVKAFGYGSDAGAVAQELEMLGVDYFAVAYV 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
            EG+ LR       I VL+   P     + +  L P I S+  +  ++         ++P
Sbjct: 64  SEGIALRDAGITTPILVLHP-QPDTFDELIERCLEPSIYSIRMMELFTAFAKGKGQENYP 122

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERF 182
             L+ +TG NRLG    +              +++ + SHL  ++DP        Q+ +F
Sbjct: 123 IHLKFNTGLNRLGFLNTDVSWILDRLRENVSVKVASLFSHLVASEDPAEEEFTLNQILQF 182

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             +               + ++SG++     HF   R GI LYG  +    +  ++ V  
Sbjct: 183 TNISKELLQALDYVPFMHMTNTSGVINYHRAHFDCVRIGIGLYGYGNSKEDTKKLKPVAR 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ I  I     G+ + Y    K T + + A   IG+ADG   +L              
Sbjct: 243 LKSVISQIHHIKPGQSIGYNRAYKATEEIVTATLPIGHADGISRSLGNGV---------- 292

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
           G   I G   PI+G + MDM M DIT   S + GD +++FG     + +A    + +Y+L
Sbjct: 293 GYVMIAGQKAPIVGNVCMDMLMVDITGI-SCKEGDDVEVFGETTSAETLAGEMQSISYEL 351

Query: 358 LVRIGTRYAKF 368
           L  IG R  + 
Sbjct: 352 LTAIGQRVKRV 362


>gi|218133145|ref|ZP_03461949.1| hypothetical protein BACPEC_01007 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992018|gb|EEC58022.1| hypothetical protein BACPEC_01007 [Bacteroides pectinophilus ATCC
           43243]
          Length = 395

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 170/376 (45%), Gaps = 27/376 (7%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             I+L  ++ N  ++ AL+    +  AVVK +AYG G   +A A+ +  V  + V +VEE
Sbjct: 13  ADINLDNIEYNVRALMALTKPGTKAMAVVKADAYGHGDVAVAKAVNDI-VDAYAVATVEE 71

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G+ LR    +  I VL  +       +      IPV  +       +  ++ G +    +
Sbjct: 72  GINLRQNGIEKMILVLGYVDEMHYDQVIRYALSIPVFDTEMAKKMSAAAVAAGENIRCHV 131

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERFRTL 185
           +VDTG +R+GL   +    T  +  K  G     I +H A AD+        Q E F+T 
Sbjct: 132 KVDTGMHRIGLRPDDDGIKTVLALAKYDGLDVEGIFTHFATADEKDKTAAYRQFELFKTF 191

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           +               ++S+GI+  P+ +  + R GI++YG       SH +   +  + 
Sbjct: 192 VEKLENEGMHFKYRHCSNSAGIIDMPDVNMDMVRLGIAMYGMYPSEEVSHDVVELKPAIE 251

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ + +++    GE VSY G  +  R + +A    GY DGYP +LS             
Sbjct: 252 LKSSVTMVKTIQPGERVSYNGTFEAKRVTRLATIETGYGDGYPRSLSN-----------K 300

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I+G   PI G++ MD  M D+TD   +   D + + G D    I ++++A  +GT 
Sbjct: 301 GYVLIRGRKAPITGRVCMDQFMVDVTDIPDVGRLDEVTLIGRDGNEYISVEEIAALAGTF 360

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+ +  +G R  + Y
Sbjct: 361 NYEFVCDLGKRIPRNY 376


>gi|261855604|ref|YP_003262887.1| alanine racemase [Halothiobacillus neapolitanus c2]
 gi|261836073|gb|ACX95840.1| alanine racemase [Halothiobacillus neapolitanus c2]
          Length = 378

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 102/368 (27%), Positives = 167/368 (45%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L IDL AL++N      ++   +  A VK +AYG G   +A AL +  V  F V +
Sbjct: 19  RRPELTIDLAALRHNAAVARQVAKGRKLLAAVKADAYGHGMATVARALRD-RVDGFMVAT 77

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + EG  LRL     R+ VL G+    E        +  +            +  G+    
Sbjct: 78  LGEGEALRLAGITQRVLVLQGVMSQAEARRAARRFLEPVFHHASQIDAVGTVGFGLPLTA 137

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERFR 183
            L++DTG +R+G + +E           +       +++H ACAD+P       Q+  F+
Sbjct: 138 WLKLDTGMHRVGFTPEEFAQAYARLSALRGVRPNPNVLTHFACADEPDRAPTDDQITLFK 197

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEA 240
              +   G E SL +S+G+L  P+      RPGI LYGG   I        ++ V+T   
Sbjct: 198 QTTTECSG-ETSLCNSAGLLAYPHAGGDWVRPGIMLYGGNPFITGTAADWDLKPVMTLTT 256

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YGG+        + V +IGY DGYP                G   
Sbjct: 257 QLIAVREVQAGERVGYGGKFTAPATMPVGVVSIGYGDGYPRHAPN-----------GTPI 305

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MD+   D+      +VGD +Q +G  + +D+VA A+GT +Y+L+ +
Sbjct: 306 VVNGQRSQVIGRVSMDLVTVDLRGI-QAQVGDTVQCWGDQLPIDEVAQAAGTISYELMCQ 364

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 365 MSGRVTRR 372


>gi|157372681|ref|YP_001480670.1| alanine racemase [Serratia proteamaculans 568]
 gi|157324445|gb|ABV43542.1| alanine racemase [Serratia proteamaculans 568]
          Length = 359

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +   +  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRQAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +  +     P  +
Sbjct: 62  EALMLRSGGIVKPILMLEGFFCAEDLPVLVANNIETAVHSIEQLEALEQATLARPVPVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  + + Q   I+SH + AD+P S     Q++ F + 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACRNVVQPVNIMSHFSRADEPESDTTLKQIQCFESF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEARI 242
            +   G + S+A+S G LL P+ H +  RPGI LYG +               +T ++ +
Sbjct: 182 AAGKPG-QRSIAASGGTLLWPDAHNEWVRPGIILYGVSPMEGSQGCQYDLQPAMTLKSNL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG      D+ + V A+GY DGYP +              G   ++
Sbjct: 241 IAVREHKAGESVGYGGTWVSAGDTRLGVVAMGYGDGYPRSA-----------PTGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+    + +VGD + ++G  + ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVPIVGRVSMDMMSVDLGPEATDKVGDEVVLWGQALPVERIADCTGISAYELITKLT 349

Query: 363 TRYAKFY 369
            R +  Y
Sbjct: 350 QRVSMEY 356


>gi|16125907|ref|NP_420471.1| alanine racemase [Caulobacter crescentus CB15]
 gi|221234670|ref|YP_002517106.1| alanine racemase [Caulobacter crescentus NA1000]
 gi|20137228|sp|Q9A7Q9|ALR_CAUCR RecName: Full=Alanine racemase
 gi|13423069|gb|AAK23639.1| alanine racemase [Caulobacter crescentus CB15]
 gi|220963842|gb|ACL95198.1| alanine racemase [Caulobacter crescentus NA1000]
          Length = 364

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 131/371 (35%), Positives = 200/371 (53%), Gaps = 14/371 (3%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  R+ IDL AL +N+ ++ A +G+A  A  VK +AYGLG   +A  L+  G + F
Sbjct: 1   MTDAQDTRITIDLDALAHNYAALRARAGDAEVAPAVKADAYGLGAAPVADRLWAEGARSF 60

Query: 61  FVTSVEEGVKLRLYTPQ--ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           +V  + EGV LR       A I+VL G  PG  + +    L+PV++S+PQ+  ++     
Sbjct: 61  YVARLAEGVALRRSLGDREATIYVLDGATPGSGEALEGAQLVPVLNSLPQVEAWNVQARS 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G     AL +DTG NRLGL  +E      +    K   + L++SHLACAD P   +N+ Q
Sbjct: 121 GR-LRAALHIDTGMNRLGLRPEELKVLVGSFDRLKRLDVELVVSHLACADTPEHPLNATQ 179

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           L RF+   +   G+  SLA+S G+ LG  Y F  TRPG+SLYGG  +      ++ V T 
Sbjct: 180 LARFQEAAALLPGVRRSLANSGGLFLGEAYRFDQTRPGVSLYGGGPEGRPHPEIRAVATV 239

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA I+ +R    GE + YG     + ++ +A+ A GYADG P              F  G
Sbjct: 240 EAPILQVRVVPRGESIGYGAGWTASDNTRVAIVAAGYADGVPRAA-----------FPRG 288

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           + +  G   P+LG+++MD+   D+TD  +   G  +++FG ++ +DD A A+GT+ Y+ L
Sbjct: 289 EVWFDGARRPMLGRVSMDLIAVDVTDCDAARPGAMVELFGANLPVDDAADAAGTSAYERL 348

Query: 359 VRIGTRYAKFY 369
            R+  R  + Y
Sbjct: 349 TRLTLRGVRRY 359


>gi|15892051|ref|NP_359765.1| alanine racemase [Rickettsia conorii str. Malish 7]
 gi|20137218|sp|Q92JD9|ALR_RICCN RecName: Full=Alanine racemase
 gi|15619170|gb|AAL02666.1| alanine racemase [Rickettsia conorii str. Malish 7]
          Length = 355

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV S EEG
Sbjct: 6   VEINLSTIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRNALGLDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG              VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPLTK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI    
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINSRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+++MD+   D+TD    E+  G   +I G     D +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTNLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRKY 353


>gi|194467667|ref|ZP_03073654.1| alanine racemase [Lactobacillus reuteri 100-23]
 gi|194454703|gb|EDX43600.1| alanine racemase [Lactobacillus reuteri 100-23]
          Length = 375

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 152/375 (40%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L ++L AL++N      +   N++  AVVK NAYG G   +A     +G     V  ++E
Sbjct: 11  LIVNLDALRHNIQEQKKVLPENSKILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCGVSHPY 124
            ++LR    +A   VL         I         +  +  + Q    +++         
Sbjct: 71  ALELRDNGIEAMTLVLGITPVEDALIAAQAGVSLTVGSLDWLEQYHRLAQVAKPKKPLKV 130

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +D+G  R+G +  +         +    +   + +H A AD P  +  + Q++R+  
Sbjct: 131 HLGIDSGMGRIGFTAVDTFKQAVKLLDNPEFEFEGMFTHFATADSPDENYFNQQVQRWHQ 190

Query: 185 LISHYKGIEASLA--SSSGILLGPN-YHFQLTRPGISLYGGTDK---INKSHPMQTVVTA 238
            ++    +   +   +S+  L           R GIS+YG       +  +  +Q V + 
Sbjct: 191 FVASLDELPPYVHMANSATGLWHREKITANTVRMGISMYGQNPSGRDLKLTLDLQPVSSL 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  +++  AG  VSYG      +D  +A   IGYADGYP  ++G             
Sbjct: 251 VSSISFVKQLKAGRSVSYGATYTAEQDEWLATLPIGYADGYPRCMTGY------------ 298

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
           K  + G    I G++ MD  M  +     +  G  + + G     +I   D+A  +GT N
Sbjct: 299 KVLVDGQFCDIAGRVCMDQMMVRLPKYYPV--GTPVVLMGKSGDQEITATDLAEQAGTIN 356

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  I  R  + Y
Sbjct: 357 YEILTNISNRVHRIY 371


>gi|260584704|ref|ZP_05852450.1| alanine racemase [Granulicatella elegans ATCC 700633]
 gi|260157727|gb|EEW92797.1| alanine racemase [Granulicatella elegans ATCC 700633]
          Length = 371

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 160/379 (42%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R+ + L A+K N  ++     N    AVVK NAYG G  ++A A +  GV  F + 
Sbjct: 6   HRNTRVIVHLNAIKQNIKAVKDHYPNTDIFAVVKANAYGHGMMEVAKAAHEEGVAGFCIA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR    Q  I +L         I+ D  +   +SS+  L     L+  G    
Sbjct: 66  LLDEAIQLRQEGFQEPILILGISRLEDVPILCDYRISTTVSSLDWLEKAQTLIPDGKQLI 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLER 181
             L +DTG  R+G+   E +        +   Q     I +H A AD+  +     QL+ 
Sbjct: 126 VHLAIDTGMGRIGVRTPEQVQEIEQFLREHDSQFVFEGIFTHFATADEADTSQFEQQLKS 185

Query: 182 FRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-----INKSHPMQT 234
           F   +     +      ++S+  +        + R GI LYG         +  + P++ 
Sbjct: 186 FNECVEALEQRPTYVHCSNSAAAIWHEGLTTNVIRWGIGLYGLNPSNGGLRLPDTLPLEK 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T E  I+ +++  AG+ +SYG     + D  IA   +GYADGY               
Sbjct: 246 ALTWETEIVFVKQLHAGDTISYGATYTCSDDEWIATLPVGYADGYLRA------------ 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
           +  G+  + G   PI+G++ MD  M  +     I VG  + + G +    I  ++++  S
Sbjct: 294 YAPGEVIVSGVRCPIVGRVCMDQCMIRLP--YEIPVGTKVTLLGKNGNERITAEELSHRS 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y+ L  I  R  + Y
Sbjct: 352 HTISYESLCLISDRVPRSY 370


>gi|290967925|ref|ZP_06559475.1| alanine racemase [Megasphaera genomosp. type_1 str. 28L]
 gi|290782064|gb|EFD94642.1| alanine racemase [Megasphaera genomosp. type_1 str. 28L]
          Length = 399

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 156/385 (40%), Gaps = 29/385 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +   +  +IDL A   N   +  L        +VVK NAYG G  ++A      G     
Sbjct: 11  TKRPVWAQIDLDAAIANIRGIRRLVGPQVCVTSVVKANAYGHGAIELAKVFLGHGADQVA 70

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
           V  + E V+LR      RI +L      + + +    + P +        +S+       
Sbjct: 71  VACLGEAVELRQGGITGRILILGHTDGHRAEELTAYGVEPTVFRYEDALRFSRAAQAQHR 130

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNS 176
           +    + VDTG  R+G       +            QL  + +H A +D           
Sbjct: 131 TVNIHIAVDTGMGRIGYEPNANGIREIQAIAALPGLQLEGVFTHFAVSDSNTPADRAYTQ 190

Query: 177 VQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q + F   ++       + +     SSSG+L    +H  + RPGI  YG          
Sbjct: 191 AQYQCFTKFLTALAEVGIRPVYTHCCSSSGLLSQTAFHQNMVRPGILQYGYHPSGTVACT 250

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           S   Q V++    I  ++    G+ +SYG   + T+++ IA   +GYADGYP  LS    
Sbjct: 251 SFTPQPVMSLRCCITHVKWVHKGQYISYGRHFQATKETCIATIPVGYADGYPRLLSNR-- 308

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                     +  + G  VP +G I MD  M D+TD  ++++GD   +FG      + L+
Sbjct: 309 ---------TEVLVHGRRVPQVGNICMDQCMIDVTDVPNVQIGDEAVLFGTQGEGSLPLE 359

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A A GT ++++L  I  R  + Y
Sbjct: 360 ELAAAIGTIDHEILCNINRRVPRVY 384


>gi|315498295|ref|YP_004087099.1| alanine racemase [Asticcacaulis excentricus CB 48]
 gi|315416307|gb|ADU12948.1| alanine racemase [Asticcacaulis excentricus CB 48]
          Length = 376

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 120/364 (32%), Positives = 187/364 (51%), Gaps = 15/364 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L++DL ALK N+  +  L+     +AVVK +AYGLG + ++  L+  G + FFV    E 
Sbjct: 18  LRVDLGALKANYLKLCQLAAPTPVSAVVKADAYGLGVKAVSATLHAVGCRHFFVALTREA 77

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
            +LR + P  A ++VL G+ PG E    +  LIPV+    Q   + +     G + P  L
Sbjct: 78  FELRSHLPTDAALYVLNGLTPGSEARAAEARLIPVLDCPEQLDAWAAVARQRGQTLPALL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDTG +RLG   ++           +  ++  ++SHLACAD+P++  N  QLE F    
Sbjct: 138 QVDTGMSRLGFMPEDLKALATAQERLQGLRIDYLMSHLACADEPANPANGQQLEAFEMAS 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             +       A+S G+ LG  YH  L RPGI+LYG    +++ +PMQ V+  +  ++  R
Sbjct: 198 RLFPDTPLCFANSGGLFLGAEYHADLCRPGIALYGAAPHLDRPNPMQPVIALDLAVLQTR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  + YGG         +A  + GYADG P  L              G  + KG  
Sbjct: 258 TVPAGTRIGYGGTVVTDAPKRLATLSAGYADGLPRRLGDQ-----------GAVYFKGTR 306

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +P +G+++MD  + DI       ++ GD++++ GP   LD VA A+GT  Y++L ++G R
Sbjct: 307 LPFIGRVSMDSIIIDIDALPEGTLKTGDFVELIGPHQSLDAVAEAAGTIAYEILTQLGPR 366

Query: 365 YAKF 368
           Y + 
Sbjct: 367 YHRH 370


>gi|238789907|ref|ZP_04633687.1| Alanine racemase 1 [Yersinia frederiksenii ATCC 33641]
 gi|238721980|gb|EEQ13640.1| Alanine racemase 1 [Yersinia frederiksenii ATCC 33641]
          Length = 359

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     +  +        +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFTAEDLPILVANRIETAVHSIEQLEALEAATLSAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  + + Q   I+SH + AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACRNVIQPVNIMSHFSRADEPKVETTRQQLDCFDTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
                G + S+A+S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 AKDKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPMDEPYGSHFNLLPAMELKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   +I
Sbjct: 241 IAVREHKAGEPVGYGGTWVSKRDTRLGVVAIGYGDGYPRSA-----------PSGTPMWI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVGIVGRVSMDMISVDLGPDATDKVGDEVLLWGAELPVEKIAARTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|71899103|ref|ZP_00681267.1| Alanine racemase [Xylella fastidiosa Ann-1]
 gi|71731097|gb|EAO33164.1| Alanine racemase [Xylella fastidiosa Ann-1]
          Length = 369

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F V  
Sbjct: 9   RPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGFAVAC 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L G    +E  +   + +  + +                   
Sbjct: 67  IEEALELRQVGIQAPILLLEGFFEVEELELIAKHNLWTVIASSWQVRALAAFHSPSPIGV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL  +E  D   +  +       ++++HLA AD+  +   + Q   F  
Sbjct: 127 WLKLDSGMHRLGLEPKEFRDAWMSLHSLPQVGEVVLMTHLARADELDNPRTNEQASVFAH 186

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
                    AS+ +SSG+L     +    RPG+ LYG         + S P++ V+   +
Sbjct: 187 ASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPISQESTSLSGPLRPVMMVYS 245

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG      R + + V A+GYADGYP                G   
Sbjct: 246 KLIAVRELPAGEPVGYGASFVTERPTRVGVVAMGYADGYPYFAVN-----------GTPL 294

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y LL  
Sbjct: 295 LVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQLLCG 354

Query: 361 IGTRYAKFY 369
           +  R  ++Y
Sbjct: 355 L-KRVRRYY 362


>gi|284006501|emb|CBA71762.1| alanine racemase (biosynthetic) [Arsenophonus nasoniae]
          Length = 361

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 108/368 (29%), Positives = 176/368 (47%), Gaps = 18/368 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               I   AL++N   +  ++ ++R  AVVK NAYG G  + A  + +     F V  + 
Sbjct: 4   ATAVIHRRALRHNLQRVREIASHSRIIAVVKANAYGHGLLETAHTVKDL-ADSFGVARIS 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     E  I   + I ++    +     + +         +
Sbjct: 63  EAIALRENGISNPILLLEGFFDLAELPIITRHAIDIVVQSIEQLETLEQIKLEKPIKVWM 122

Query: 127 QVDTGFNRLGLSLQEALD-FTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERFRT 184
           ++DTG +RLG   +EA   +      + + +   I+SH + AD+P      + QL  F  
Sbjct: 123 KLDTGMHRLGFRPEEAAISYARLVACQNIQKPINIMSHFSRADEPGLPAATNQQLTCFNV 182

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
            I    G E S+A+S+GILL P  +F   RPGI +YG + +  K      +  V+T ++ 
Sbjct: 183 FIKDKPG-EKSIAASAGILLWPASYFDWVRPGIMMYGASPQEGKQGKDFGLLPVMTLKSN 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I IR+  AGE V YGG     +D+ + V AIGY DGYP                G    
Sbjct: 242 LIAIRQHKAGEPVGYGGVWVSEQDTNLGVVAIGYGDGYPRNA-----------PSGTPIL 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G  VPI+G+++MDM   D+    + +VGD   ++G  + +++VA  +G ++Y+LL ++
Sbjct: 291 INGRKVPIVGRVSMDMISVDLGVGTNDKVGDEAIMWGDLLPVEEVAAYTGVSDYELLTKL 350

Query: 362 GTRYAKFY 369
            +R A  Y
Sbjct: 351 TSRVAMEY 358


>gi|255657417|ref|ZP_05402826.1| alanine racemase [Clostridium difficile QCD-23m63]
 gi|296449013|ref|ZP_06890803.1| alanine racemase [Clostridium difficile NAP08]
 gi|296879836|ref|ZP_06903809.1| alanine racemase [Clostridium difficile NAP07]
 gi|296262106|gb|EFH08911.1| alanine racemase [Clostridium difficile NAP08]
 gi|296429125|gb|EFH14999.1| alanine racemase [Clostridium difficile NAP07]
          Length = 385

 Score =  279 bits (713), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 153/376 (40%), Gaps = 24/376 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +I+L  L+ N +++  L   + +   V+K +AYG G  ++A  L    V    V  
Sbjct: 7   PTWAEINLDNLRFNLNNIKNLLEEDIKVCGVIKADAYGHGAVEVAKLLEKEKVDYLAVAR 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
             EG++LR       I  L        +      +   + S+      +++    G    
Sbjct: 67  TAEGIELRQNGITLPILNLGYTPDEAFEDSIKNKITMTVYSLETAQKINEIAKSLGEKAC 126

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++D+G  R+G    +E++         +   L  + +H A AD+ S      Q   +
Sbjct: 127 VHVKIDSGMTRIGFQPNEESVQEIIELNKLEYIDLEGMFTHFATADEVSKEYTYKQANNY 186

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
           + +               +++S+ I+  P+    + R GI LYG     +       ++ 
Sbjct: 187 KFMSDKLDEAGVKIAIKHVSNSAAIMDCPDLRLNMVRAGIILYGHYPSDDVFKDRLELRP 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  +++I  I++   G  +SYG +   T    I    IGYADG+               
Sbjct: 247 AMKLKSKIGHIKQVEPGVGISYGLKYTTTGKETIVTIPIGYADGFTRIQKNP-------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTT 353
               K  IKG +  ++G+I MD  M  I   + I+VGD + +FG  ++  + +A   GT 
Sbjct: 299 ----KVLIKGEVFDVVGRICMDQIMVRIDKDIDIKVGDEVILFGEGEVTAERIAKDLGTI 354

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  I  R  + Y
Sbjct: 355 NYEVLCMISRRVDRVY 370


>gi|291536141|emb|CBL09253.1| alanine racemase [Roseburia intestinalis M50/1]
          Length = 389

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 167/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-Q 58
           M+    +  +IDL A+ +N  +M   ++ + +  AV+K + YG G  +IA  +       
Sbjct: 1   MNRYSRVHAEIDLDAILHNMDAMRGNIAKDTKIMAVIKADGYGHGAVEIAETIEKLDYLY 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +VEEG+ LR +  Q  I +L  + P Q   +    + P + +       S   + 
Sbjct: 61  GYAVATVEEGLILRNHGIQKPILILGYVFPDQYVDMIKAGIRPTVFTREMAEKLSVAAAS 120

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G        +DTG +R+G  + +EA D            +  I +H A AD+       
Sbjct: 121 IGRDCKIHFAIDTGMSRIGYQVTEEAADEMAQLSKLPHIIVEGIFTHFAKADEKDKEPTY 180

Query: 177 VQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH- 230
            Q++ FR +I          +    ++S+GI+  P  +  + R GI+LYG     +    
Sbjct: 181 QQIKLFRKMIDMLEERGVSILIHHCSNSAGIVDIPEANMDMVRAGITLYGMWPSEDVDKT 240

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  ++    +  +++  AG  +SYGG        +IA   +GYADGY   LS    
Sbjct: 241 AISLKPALSLVTHVAYVKELPAGRAISYGGTYVTKEPRMIATIPVGYADGYARGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D+TD   ++  D + + G D    I ++
Sbjct: 298 --------KGAVLIHGRRAPILGRVCMDQFMVDVTDIPDVKNEDEVILIGRDGDECITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +V   SG  NY+    +G R  + Y
Sbjct: 350 EVGGLSGRFNYEFACDLGKRIPRVY 374


>gi|240147271|ref|ZP_04745872.1| alanine racemase [Roseburia intestinalis L1-82]
 gi|257200543|gb|EEU98827.1| alanine racemase [Roseburia intestinalis L1-82]
          Length = 389

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 165/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-Q 58
           M+    +  +IDL A+ +N  +M   ++ + +  AV+K + YG G  +IA  +       
Sbjct: 1   MNRYSRVHAEIDLDAILHNMDAMRGNIAKDTKIMAVIKADGYGHGAVEIAETIEKLDYLY 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +VEEG+ LR +  Q  I +L  + P Q   +    + P + +       S   + 
Sbjct: 61  GYAVATVEEGLILRNHGIQKPILILGYVFPDQYVDMIKAGIRPTVFTREMAEKLSVAAAS 120

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G        +DTG +R+G  + +EA D            +  I +H A AD+       
Sbjct: 121 IGRDCKIHFAIDTGMSRIGYQVTEEAADEMAQLSKLPHIIVEGIFTHFAKADEKDKEPTY 180

Query: 177 VQLERFRTLI----SHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKINKSH- 230
            Q++ FR +I         I     S+S  ++  P  +  + R GI+LYG     +    
Sbjct: 181 QQIKLFRKMIDMLEERGVSIPIHHCSNSAGIVDIPEANMDMVRAGITLYGMWPSEDVDKT 240

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  ++    +  +++  AG  +SYGG        +IA   +GYADGY   LS    
Sbjct: 241 AISLKPALSLVTHVAYVKELPAGRAISYGGTYVTKEPRMIATIPVGYADGYARGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D+TD   ++  D + + G D    I ++
Sbjct: 298 --------KGAVLIHGRRAPILGRVCMDQFMVDVTDIPDVKNEDEVILIGRDGDECITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +V   SG  NY+    +G R  + Y
Sbjct: 350 EVGGLSGRFNYEFACDLGKRIPRVY 374


>gi|291538997|emb|CBL12108.1| alanine racemase [Roseburia intestinalis XB6B4]
          Length = 389

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 165/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-Q 58
           M+    +  +IDL A+ +N  +M   ++ + +  AV+K + YG G  +IA  +       
Sbjct: 1   MNRYSRVHAEIDLDAILHNMDAMRGNIAKDTKIMAVIKADGYGHGAVEIAETIEKLDYLY 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +VEEG+ LR +  Q  I +L  + P Q   +    + P + +       S   + 
Sbjct: 61  GYAVATVEEGLILRNHGIQKPILILGYVFPDQYVDMIKAGIRPTVFTREMAEKLSVAAAS 120

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G        +DTG +R+G  + +EA D            +  I +H A AD+       
Sbjct: 121 IGRDCKIHFAIDTGMSRIGYQVTEEATDEMAQLSKLPHIIVEGIFTHFAKADEKDKEPTY 180

Query: 177 VQLERFRTLI----SHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKINKSH- 230
            Q++ FR +I         I     S+S  ++  P  +  + R GI+LYG     +    
Sbjct: 181 QQIKLFRKMIDMLEERGVSIPIHHCSNSAGIVDIPEANMDMVRAGITLYGMWPSEDVDKT 240

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  ++    +  +++  AG  +SYGG        +IA   +GYADGY   LS    
Sbjct: 241 AISLKPALSLVTHVAYVKELPAGRAISYGGTYVTKEPRMIATIPVGYADGYARGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D+TD   ++  D + + G D    I ++
Sbjct: 298 --------KGAVLIHGRRAPILGRVCMDQFMVDVTDIPDVKNEDEVILIGRDGDECITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +V   SG  NY+    +G R  + Y
Sbjct: 350 EVGGLSGRFNYEFACDLGKRIPRVY 374


>gi|320547461|ref|ZP_08041747.1| alanine racemase [Streptococcus equinus ATCC 9812]
 gi|320447806|gb|EFW88563.1| alanine racemase [Streptococcus equinus ATCC 9812]
          Length = 368

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+  N  ++ A      +  AVVK NAYG G +K+A A+++  V
Sbjct: 1   MISSLHRPTRALIDLGAICQNIEAVKANIPEGKKAFAVVKANAYGHGAKKVAQAVHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++V+E ++LR    +  I +L  I P +  +  D ++   ++S   L    +   
Sbjct: 60  DGFCVSNVDEALELREAGIEETILILGVIMPNEVALARDYDITLTVASQEWLDLAIEQDI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   +  +    +  K    +  I +H A AD+      + 
Sbjct: 120 SLKGVKVHLKVDSGMGRIGVRSLDEAENLIANLKKAGASVEGIFTHFATADEADDTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QLE F  ++ +     A +   +S+  +      F + R GI +YG       I   +P+
Sbjct: 180 QLEFFTNIVDNLSDKPALVHASNSATSIWHSETIFNIVRLGIVMYGLNPSGTDIELPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G +  I+G+++MD     + +     +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGQVCEIVGRVSMDQITIRLPEKFP--IGTKVTLIGQEGDKVISATDLAK 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  +FY+
Sbjct: 346 KRGTINYEVLCLLSDRIPRFYS 367


>gi|113475275|ref|YP_721336.1| alanine racemase [Trichodesmium erythraeum IMS101]
 gi|110166323|gb|ABG50863.1| alanine racemase [Trichodesmium erythraeum IMS101]
          Length = 395

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++I+  AL  N   + +L S   +   VVK +AYG G  KI+  +  AGV    V 
Sbjct: 24  QRAWVEINDRALSYNVQQLKSLLSAKTQLMGVVKADAYGHGASKISKTILEAGVDRLAVA 83

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-S 121
           ++ EG++LRL   +  I +L  I  P Q + I    L P I +  Q   +S+ +S     
Sbjct: 84  TLPEGIELRLAGIKPPILILGAIDRPEQIRAIAHWQLEPTICTPQQALVFSETLSYQTEP 143

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG +RLG   Q+A++F          +++ I SHLA AD+    V   Q +R
Sbjct: 144 MLVHLKLDTGMSRLGTPWQQAVEFVKFVQGLPNLKIASIYSHLATADNLDQTVMKQQHQR 203

Query: 182 FRTLISHY--------KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHP 231
           F   I             I+  LA+S+  L  P  H+ + R G+++YG     +      
Sbjct: 204 FEEAIGLCGIGGKSFSSDIQLHLANSAATLTDPALHYDMVRVGLAIYGLYPAPHLQDKIN 263

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+  +AR+  ++   AG  VSYG Q    +   +AV  IGYADG P  LS       
Sbjct: 264 LKPVMQVKARVTQVKTIEAGTGVSYGYQFIAPKQMRLAVVGIGYADGLPRNLSNRM---- 319

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                  K  ++  ++P +G ITMD  M D++    +E G+ + + G      I  ++ A
Sbjct: 320 -------KVIVRDRLIPQVGAITMDQLMLDVSAIPDLETGEVVTLLGQVGKHQISAENWA 372

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
              GT ++++L     R  + 
Sbjct: 373 NTLGTISWEILCGFKNRLPRV 393


>gi|285019694|ref|YP_003377405.1| alanine racemase [Xanthomonas albilineans GPE PC73]
 gi|283474912|emb|CBA17411.1| probable alanine racemase protein [Xanthomonas albilineans]
          Length = 357

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 104/368 (28%), Positives = 162/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L G  +  AVVK +AYG G    A AL       F V  
Sbjct: 2   RPARALIDLDALRHNYCLARRL-GGGKVLAVVKADAYGHGAVACARALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     A I +L GI    E  +   + +  + + P                 
Sbjct: 60  IEEALELRQAGIAAPILLLEGIFEADELPLVAAHRLWCVVASPWQVEAIAAFDAPQPLCL 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL+                 +  +++SH A AD+  S     Q+E FR 
Sbjct: 120 WLKLDSGMHRLGLAPDAFRAAHARLSALPQVERLVLMSHFARADELESARTLEQVEVFRQ 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
             +   G E SL +S  +L  P  H    RPG+ LYG             ++ V+T +++
Sbjct: 180 TTADLAG-EISLCNSPALLGWPQVHSDWARPGLMLYGADPFAAAAALPGELRPVMTLQSK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    GE V YG +    R + + V AIGYADGYP   S            G    
Sbjct: 239 VIAVRDLAPGEPVGYGARFVAPRPTRVGVVAIGYADGYPQFASN-----------GTPVL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+T+     +G  +Q++G   ++D +A    ++ Y LL  +
Sbjct: 288 IDGMPGELIGRVSMDMLTVDLTEHPQAGLGSVVQLWGAQPRIDALAARCASSAYRLLCGL 347

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 348 -KRAPRHY 354


>gi|319952867|ref|YP_004164134.1| alanine racemase [Cellulophaga algicola DSM 14237]
 gi|319421527|gb|ADV48636.1| Alanine racemase [Cellulophaga algicola DSM 14237]
          Length = 375

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 152/377 (40%), Gaps = 21/377 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M   +   L+I+LTAL++N+  +   +S   +   VVK  AYG     IA  L   G   
Sbjct: 1   MAKAQETVLEINLTALEHNYRYLKTKISSKTKFLGVVKAFAYGSDAVSIAQKLVALGADY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMS 117
             V   EEGV LR    +  I VL+         I +  L P + S   LT +  +    
Sbjct: 61  LAVAYTEEGVSLRNAGIKIPILVLHPQIVS-FDTIIERCLEPNLYSERILTAFITAAERH 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
               +P  L+ +TG NRLG + ++              ++  I SHLA ++D        
Sbjct: 120 QQKIYPIHLKFNTGLNRLGFNAKDIPSIVKKLSETTAVKVLSIFSHLAASEDLEEKDFTL 179

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q++ F  + +             LA++SGI+  P  HF + R GI LYG  + I++   
Sbjct: 180 NQIKNFNIISTQIDAALPYIPFKHLANTSGIINYPEAHFDMVRSGIGLYGFGNDIDEDKN 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
              V T +  I  I      E V Y       +    A   +G+ADG             
Sbjct: 240 FIPVATLKTNISQIHYLEPNESVGYNRAFTSNKKIKTATLPLGHADGIGREYGNG----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G   + GY  PI+G   MDM M D+TD      GD + +FG      + A  + 
Sbjct: 295 -----KGVVCVHGYYAPIIGNTCMDMIMVDVTDI-DCSEGDEVIVFGNKPTATEFAAGAN 348

Query: 352 TTNYDLLVRIGTRYAKF 368
           T +Y++L  I  R  + 
Sbjct: 349 TISYEVLTGISQRVKRV 365


>gi|134296048|ref|YP_001119783.1| alanine racemase [Burkholderia vietnamiensis G4]
 gi|134139205|gb|ABO54948.1| alanine racemase [Burkholderia vietnamiensis G4]
          Length = 356

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD       + QL  F  
Sbjct: 121 QLKMNSGMNRLGYQPEKYRAAWERARACPAIGQITLMTHFSDADTERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            +Q  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSADIADTGLQPTMTLTS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAPARMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGVRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNTLPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|194289835|ref|YP_002005742.1| alanine racemase [Cupriavidus taiwanensis LMG 19424]
 gi|226711038|sp|B3R2F9|ALR_CUPTR RecName: Full=Alanine racemase
 gi|193223670|emb|CAQ69677.1| alanine racemase 2, PLP-binding [Cupriavidus taiwanensis LMG 19424]
          Length = 373

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 160/367 (43%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN   +   + +AR  AVVK NAYG G  ++  AL   G   F +  
Sbjct: 3   RPIQAVIHQPALANNLDVIRRKAPDARVWAVVKANAYGHGIRRVFAALR--GADGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E V LR    Q  I +L G   P    +I    L   I    QL         G    
Sbjct: 61  LNEAVLLRDLGWQGPILLLEGFFQPQDIALIEQYRLTTAIHCDEQLRMLESARPKG-PLA 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG    E       +         + ++H + AD P     + Q+E F 
Sbjct: 120 IQLKLNTGMNRLGFHPAEYRAAWERARAMPCVGSIVHMTHFSDADGPRGI--AHQVEAFD 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
              ++  G EASL++S+ +L  P  H    RPGI LYG +            +Q  ++  
Sbjct: 178 AATANLPG-EASLSNSAAVLWHPQAHRAWVRPGIILYGASPTGRDADIAGTGLQPAMSLH 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G+ V YG      R   I V A GYADGYP   SG   + +P       
Sbjct: 237 SELIAVQDLQPGDTVGYGSLFTAERPMRIGVVACGYADGYPRHASGWGEQRAP------- 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+T      VG  + ++G  + +D+VA ASGT  Y+L+ 
Sbjct: 290 VLVDGVRTELVGRVSMDMLCVDLTPCPKARVGSPVTLWGQGLPIDEVAQASGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|295110109|emb|CBL24062.1| alanine racemase [Ruminococcus obeum A2-162]
          Length = 388

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 158/385 (41%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M   + ++  + L A+ +N+  M   ++   +  AV+K + YG G E IA  + +   + 
Sbjct: 1   MKKFDRVKAVVSLDAIAHNFEEMKKNIAEGTKIVAVIKADGYGHGAEAIARLIEDYEYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            +   + EE ++LR       I +L  +     K +    +   +         S+    
Sbjct: 61  GYATATPEEALQLRDAGIDKPILILGIVFEEYYKELIAHEVRMTVCEYEMAAALSEEAVR 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      + +DTG +R+G   + E+++           ++  + +H A AD+       
Sbjct: 121 QGRQVHIHIGLDTGMSRIGFADVPESVETIKKIAALPNVEIEGMFTHFARADETDRSPAI 180

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            QL R+         +  +      ++S+GI+  P  +    R GI++YG          
Sbjct: 181 TQLNRYLAFTELLEKAGVEIPMKHCSNSAGIIRVPEANLNAVRAGITIYGIYPSNEVERD 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +   +  ++ +  ++   AG  +SYGG     +D  +A   +GYADGYP +LS    
Sbjct: 241 IVKLIPAMELKSHVSYVKDLPAGTPISYGGTFASEKDLRVATIPVGYADGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PI+G++ MD  M D+TD   ++ GD + + G D    I ++
Sbjct: 298 --------KGWVLIHGQKAPIIGRVCMDQFMVDVTDIPEVKHGDEVTLIGKDGEEFISIE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
                SG  +Y+    I  R  + Y
Sbjct: 350 TFGDLSGRFSYEFACDISKRVPRVY 374


>gi|330992271|ref|ZP_08316219.1| Alanine racemase [Gluconacetobacter sp. SXCC-1]
 gi|329760470|gb|EGG76966.1| Alanine racemase [Gluconacetobacter sp. SXCC-1]
          Length = 382

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 137/365 (37%), Positives = 205/365 (56%), Gaps = 14/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I L A+  N+  + A +G A  AAVVK +AYGLG  ++AP L  AG + FFV  +EEG
Sbjct: 22  LEISLGAVAANYRLLRARTGQATCAAVVKADAYGLGAHQVAPVLEQAGAKVFFVAHLEEG 81

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           ++LR + +P A+IFVL+G  PG E+      L+PV++S+ Q+  + +       + P AL
Sbjct: 82  IRLRPHVSPTAQIFVLHGPMPGTERAFTHHALLPVLNSMEQIAGWRAHASKAQHALPAAL 141

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDTG +R GLS  +              +  L++SHLACAD P+S  N++Q +R R + 
Sbjct: 142 QVDTGMSRFGLSDADVTALADTPALLDGIETRLVMSHLACADTPASPANALQRDRLRAMA 201

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +       +L++SSGI LGP+YHF L RPG +LYG     +  +P+Q  V  +ARI+  R
Sbjct: 202 ARLPAAPLALSASSGIFLGPDYHFDLVRPGAALYGLAPNADAPNPLQPTVRLQARIVQRR 261

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG+ V YG     +    IA   IGYADG+                 GG  ++  Y 
Sbjct: 262 TIKAGDGVGYGLTWHASGPRRIATLGIGYADGFLRQ----------GASNGGCAWLDSYR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PILG+I+MD T  D+T      ++   ++ + GP   +DDVA A+GT  Y++L  +G+R
Sbjct: 312 LPILGRISMDSTTVDVTGVPESVLDQATHVDMIGPRRSVDDVAHAAGTIGYEVLTALGSR 371

Query: 365 YAKFY 369
           + + Y
Sbjct: 372 FHRVY 376


>gi|325298878|ref|YP_004258795.1| Alanine racemase [Bacteroides salanitronis DSM 18170]
 gi|324318431|gb|ADY36322.1| Alanine racemase [Bacteroides salanitronis DSM 18170]
          Length = 823

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 148/370 (40%), Gaps = 22/370 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  ++A  L    V    V   +E
Sbjct: 464 LEINLNALVDNLNYYRNKLKPETKLMCMVKASAYGAGPFEVAKTLEEHRVDYLAVAVADE 523

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
           G  LR       I ++       + +        +                GV + P  +
Sbjct: 524 GADLRKAGITCPIVIMNPEATAFKTMFAYRLEPNIYGFPILEEMIKAAEREGVSNFPIHI 583

Query: 127 QVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           ++DTG +RLG S  Q+          +       + SHLA +D +        Q+E F  
Sbjct: 584 KIDTGMHRLGFSPHQDMQRLVERLHRQSAVIPRSVFSHLAGSDSERFDAFTRKQIETFEA 643

Query: 185 LISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +  +      I   + +++GI   P   F + R GI LYG     N  H +  V T +
Sbjct: 644 AAAELQAGFGVKILRHVCNTAGIERYPGAQFDMVRLGIGLYGIDPFTN--HILHNVSTLK 701

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I    A E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 702 TTILQIHDIPADETVGYSRKGVLYRDSRIATIPIGYADGLNRHLGNGH----------AY 751

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  +A A GT  Y++L 
Sbjct: 752 CLVNGKKAPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLAEALGTIPYEILT 810

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 811 SVSNRVKRVY 820


>gi|320539399|ref|ZP_08039068.1| alanine racemase 1, PLP-binding, biosynthetic [Serratia symbiotica
           str. Tucson]
 gi|320030524|gb|EFW12534.1| alanine racemase 1, PLP-binding, biosynthetic [Serratia symbiotica
           str. Tucson]
          Length = 359

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 108/367 (29%), Positives = 176/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID +AL++N   +   +  +   A+VK NAYG G  + A  L +     F V+ + 
Sbjct: 4   ATAVIDRSALRHNLQQVRRQAPQSHLIAIVKANAYGHGMLETAHTLQD--ADCFGVSRIS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I  +    +     +        P  +
Sbjct: 62  EALALRFGGIVKPILLLEGFFSAEDLPLLVANNIETVVHSSEQLEALEQAKLAHPLPVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F         + Q   I+S  +CAD+P S     Q+  F   
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLCACHNVAQPVNIMSQFSCADEPGSDATLKQIACFEQF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARI 242
                G + S+A+SSGILL P+ H Q  RPGI LYG +   N +   H +Q  +T ++ +
Sbjct: 182 ARGKPG-QRSIAASSGILLWPDAHNQWVRPGIILYGVSPLDNANGSQHLLQPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R  LAGE V YGG     RD+ + V AIGY DGYP +                  ++
Sbjct: 241 IAVRDHLAGEPVGYGGTWISQRDTRLGVVAIGYGDGYPRSA-----------PTCTPIWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+    + +VGD   ++G  + ++ +A+ +G + Y+L+ ++ 
Sbjct: 290 NGREVPIVGRVSMDMISVDLGPDATDKVGDEAVLWGQALPVERIAIYAGISVYELVTKLT 349

Query: 363 TRYAKFY 369
            R A  Y
Sbjct: 350 QRVAMEY 356


>gi|148543492|ref|YP_001270862.1| alanine racemase [Lactobacillus reuteri DSM 20016]
 gi|184152900|ref|YP_001841241.1| alanine racemase [Lactobacillus reuteri JCM 1112]
 gi|227363641|ref|ZP_03847755.1| alanine racemase [Lactobacillus reuteri MM2-3]
 gi|325681836|ref|ZP_08161355.1| alanine racemase [Lactobacillus reuteri MM4-1A]
 gi|166969414|sp|A5VI51|ALR_LACRD RecName: Full=Alanine racemase
 gi|226711051|sp|B2G5M9|ALR_LACRJ RecName: Full=Alanine racemase
 gi|148530526|gb|ABQ82525.1| alanine racemase [Lactobacillus reuteri DSM 20016]
 gi|183224244|dbj|BAG24761.1| alanine racemase [Lactobacillus reuteri JCM 1112]
 gi|227071310|gb|EEI09619.1| alanine racemase [Lactobacillus reuteri MM2-3]
 gi|324978927|gb|EGC15875.1| alanine racemase [Lactobacillus reuteri MM4-1A]
          Length = 375

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 152/375 (40%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +DL AL++N      +   N++  AVVK NAYG G   +A     +G     V  ++E
Sbjct: 11  LIVDLDALRHNIQEQKKVLPENSKILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCGVSHPY 124
            ++LR    +A   VL         I         +  +  + Q    +++         
Sbjct: 71  ALELRDNGIEAMTLVLGITSVEDALIAAQAGVSLTVGSLDWLEQYHQLAQVAKPKKPLKV 130

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +D+G  R+G +   A        +    +   + +H A AD P  +  + Q++R+  
Sbjct: 131 HLGIDSGMGRIGFTEVAAFKQAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQRWHQ 190

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHF-QLTRPGISLYGGTDK---INKSHPMQTVVTA 238
            ++    +   +   +S+  L           R GIS+YG       +  +  +Q V + 
Sbjct: 191 FVASLAELPPYVHMANSATGLWHRETITANTIRMGISMYGQNPSGRDLKLTLDLQPVSSL 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  +++  AG  VSYG      +D  +A   IGYADGYP  ++G             
Sbjct: 251 VSSISFVKQLKAGRSVSYGATYTAEQDEWLATLPIGYADGYPRCMTGY------------ 298

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
           K  + G    I G++ MD  M  +     +  G  + + G     +I   D+A  +GT N
Sbjct: 299 KVLVDGQFCDIAGRVCMDQMMIRLPKYYPV--GTPVVLMGKSGDQEITATDLAERAGTIN 356

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  I  R  + Y
Sbjct: 357 YEILTNISNRVHRIY 371


>gi|46201989|ref|ZP_00208341.1| COG0787: Alanine racemase [Magnetospirillum magnetotacticum MS-1]
          Length = 371

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 145/365 (39%), Positives = 201/365 (55%), Gaps = 14/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L ID+ A+  NW  ++AL   A  +AVVK + YGLG E IAPAL  AG Q FFV  V EG
Sbjct: 11  LTIDVAAIVANWKRLSALVAPAEASAVVKADCYGLGMEHIAPALSAAGCQSFFVACVNEG 70

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP-YALQ 127
           + LR   P A I VL G   G E      NLIPV++S+ Q+T ++     G   P  A+ 
Sbjct: 71  IALRRILPAAVIHVLSGPLGGDEGEFAAHNLIPVLNSLAQITGWAGFAKKGSGAPAAAIH 130

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGLS  E              +  L++SHLACADD  S +N+ QL   R L S
Sbjct: 131 IDTGMNRLGLSETELERLAAKPEITAAIRPILVMSHLACADDADSPMNARQLTTLRRLAS 190

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           H   +  S+A+SSGI LG  +H  L RPG +LYG      + +PM  VV  + +I+ +R 
Sbjct: 191 HLPALPQSIAASSGIFLGRGFHLGLVRPGAALYGLNPMPGRPNPMSQVVKLQGKIVQVRD 250

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             + + V YG   ++     +AV A+GYADG+  +LS             G G I G  V
Sbjct: 251 VDSPQTVGYGATHRVEGKRKLAVVAVGYADGWFRSLSNR-----------GHGMIGGMKV 299

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P+ G+I+MD+T FD+TD  +     G +I++ GPD+  D VA  +GT  Y++L  +G R+
Sbjct: 300 PVAGRISMDLTTFDVTDVPAEHAHPGAWIELIGPDLSPDRVADEAGTIGYEILTSLGRRH 359

Query: 366 AKFYT 370
            + +T
Sbjct: 360 HRRWT 364


>gi|284929657|ref|YP_003422179.1| alanine racemase [cyanobacterium UCYN-A]
 gi|284810101|gb|ADB95798.1| alanine racemase [cyanobacterium UCYN-A]
          Length = 400

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 105/376 (27%), Positives = 163/376 (43%), Gaps = 23/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++IDL AL  N   +  L S      AVVK + YG G   +A  +  AG     V 
Sbjct: 26  QRAWMQIDLDALTYNVTQIKNLLSTGTALMAVVKADGYGHGGVTVAKTVLKAGANALAVA 85

Query: 64  SVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS- 121
           ++ EG++LR     + I VL     P +       NL   I  + Q    S+ +S     
Sbjct: 86  TLMEGIELREAGVNSPILVLGVTNTPEEVVANIHWNLEATICCLEQAFMISRTLSQYKKQ 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG +RLG    +              +LS I SHL+ +DDP      +Q +R
Sbjct: 146 LSVHLKLDTGMSRLGTPWYQGTRLIKLVHKLPYLKLSGIYSHLSASDDPDKESIELQHQR 205

Query: 182 FRT---LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVV 236
           F T    + +        A+S+  +  P  H+ L R G++LYG     +      ++ ++
Sbjct: 206 FETVVSDLKNQNKFCLHFANSAATINYPQLHYNLVRVGLALYGIYPSPHLRSQVSLKPIL 265

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             +A+I  I+    G  VSYG Q       +IA+ +IGYADG P  LS            
Sbjct: 266 QVKAKITQIKTISQGTKVSYGNQFTSKHSMIIAIVSIGYADGVPRNLSNRL--------- 316

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I G     +G ITMD  + D++    I+VGD + + G D    I  +D AL  GT
Sbjct: 317 --QVLIHGQRAHQIGAITMDQLILDVSHVKDIKVGDIVTLIGKDGEQEITANDWALELGT 374

Query: 353 TNYDLLVRIGTRYAKF 368
            ++++L     R  + 
Sbjct: 375 ISWEILCGFKRRLPRV 390


>gi|149918225|ref|ZP_01906717.1| alanine racemase [Plesiocystis pacifica SIR-1]
 gi|149820985|gb|EDM80392.1| alanine racemase [Plesiocystis pacifica SIR-1]
          Length = 402

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 108/380 (28%), Positives = 179/380 (47%), Gaps = 27/380 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 +D  AL +N  ++ A  G   R  AVVK + YG G  + A A  +AG     V+
Sbjct: 32  RPTWASVDEGALAHNLRTVQAHVGERCRVLAVVKADGYGHGAVESARAFVDAGAWGLAVS 91

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
            VEEGV+LR +  +A + VL G+HPG E +I    L PV+ S         +   S   +
Sbjct: 92  LVEEGVELRQHGVRAPVLVLSGVHPGSEDVIVHGALTPVVWSPQHFQLLTSAVRRSGAAT 151

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG--QLSLIISHLACADDPSSHVN-SVQ 178
            P  +++DTG +RLG+  ++                ++  +++H ACADD    +  + Q
Sbjct: 152 LPVHIKIDTGMSRLGVLPEDLGALLDWYQAHAASELRIEGVMTHFACADDAEDALTSARQ 211

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM- 232
           LERF+  +              + +S+G++     H  + RPGI+LYG         P  
Sbjct: 212 LERFQACLRVLGERRIHPSIRHVCNSAGLVRFSEAHLDMVRPGIALYGAGSSRAVELPEL 271

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +   +R++ IR+  AG  VSYG ++ L R S + +  +GY DGYP T+SG       
Sbjct: 272 RMAMGVHSRLLGIRELPAGTAVSYGHRQVLDRPSRLGIVPVGYGDGYPRTMSGR------ 325

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I+G+  P++G ITMD++M D+T+      G+ + + G      I L ++A 
Sbjct: 326 -----AQMLIRGHRCPVVGNITMDLSMVDVTELPDAREGERVTLMGTQGRERIDLYELAD 380

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
            +    Y++   +  R  + 
Sbjct: 381 WAQLIPYEVTCGLSKRVPRR 400


>gi|87122505|ref|ZP_01078385.1| biosynthetic alanine racemase [Marinomonas sp. MED121]
 gi|86162298|gb|EAQ63583.1| biosynthetic alanine racemase [Marinomonas sp. MED121]
          Length = 359

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 16/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   IDL A+K+N+     L  N +  AVVK NAYG G  ++A  L +  V  F V +
Sbjct: 3   RPLTAHIDLAAIKHNYLLAKKLQPNTKAFAVVKANAYGHGAVEVAKYLDDI-VDAFAVAA 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     + I +L G+    E  + + +   V     Q      + +       
Sbjct: 62  IEEAIELREAGVSSPILLLEGVFESAEWQVCENHNFWVAI-ENQTQLTDFIAANIQIDKV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG+    A  F     +       ++++H + ADD  S   S QL  F  
Sbjct: 121 FLKLDSGMHRLGVQPSSADKFIELLEHNPNVGEVVLMTHFSSADDLDSPATSEQLAVFDQ 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
           +   +  ++ S+A+S+  L          RPGI LYG +       +   ++  +T  ++
Sbjct: 181 VHRQFSQLDVSVANSAATLKWQLPEGGWIRPGIMLYGISPFDEISAQELGLKPAMTLTSK 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V Y           IA  A+GY DGYP   +                 
Sbjct: 241 IISLREVKDGEAVGYARAYVAKGQRQIATVAVGYGDGYPRMANHQ-----------TPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           ++  M  + G+++MDM   D+T+    +VGD + ++G    ++DVA  S T  Y+L+ R+
Sbjct: 290 VEQAMCCLSGRVSMDMITLDVTELGETQVGDEVILWGEKNPVEDVAAHSSTIAYELVTRM 349

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 350 TGRAKRQY 357


>gi|312880319|ref|ZP_07740119.1| alanine racemase [Aminomonas paucivorans DSM 12260]
 gi|310783610|gb|EFQ24008.1| alanine racemase [Aminomonas paucivorans DSM 12260]
          Length = 372

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/377 (24%), Positives = 150/377 (39%), Gaps = 24/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R+++ L  ++ N+ S+ +  G  A+   VVK NAYG G   +A AL  AG   F V 
Sbjct: 3   RPTRMEVHLGRIQENYRSIRSHVGARAQVMGVVKANAYGTGMVPVASALREAGCTRFAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           + EE ++LR       I V+          +   ++   ++ +      S+     G   
Sbjct: 63  TPEEALELRRCGIGDPILVMGASSADAAGELVAQDVAATVADLSFAQVLSREATRQGRPA 122

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + L+VDTG  R+G   QE                  + +H A AD+        Q  RF
Sbjct: 123 RFHLKVDTGMGRIGFLPQELPSLLPELLALGNLDFEGVFTHFATADEERLDYTWTQFRRF 182

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             ++   +            +S+ ++  P  H    RPG+ LYG         P      
Sbjct: 183 GDVLEELRDRGVGVRLRHACNSAALMRCPEMHLDAVRPGVILYGLRPSPGCPVPFPLSPA 242

Query: 238 AEAR--IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            E +  +  +R+   G  VSYG +        +AV  +GY DGY   L+G          
Sbjct: 243 FEVKTSVAALRELPPGSGVSYGLRYVTRGRERLAVLPLGYRDGYVRALAG---------- 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  I G+ VP++G I MD  + D+T    + VGD + + G      I+ +++A   G
Sbjct: 293 -KAEVLILGHRVPVVGTICMDQCLVDVTSLPEVCVGDEVVLLGRQGDRSIEAEEMARWLG 351

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++      R  + 
Sbjct: 352 TIVYEIPGLFSERVPRV 368


>gi|238650557|ref|YP_002916409.1| alanine racemase [Rickettsia peacockii str. Rustic]
 gi|259710073|sp|C4K1B0|ALR_RICPU RecName: Full=Alanine racemase
 gi|238624655|gb|ACR47361.1| alanine racemase [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV S EEG
Sbjct: 6   VEINLSTIKNNYLLLQDVCKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRNALGLDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG              VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPLTK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI    
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINSRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+++MD+   D+TD    E+  G   +I G     D +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTNLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRKY 353


>gi|297538234|ref|YP_003674003.1| alanine racemase [Methylotenera sp. 301]
 gi|297257581|gb|ADI29426.1| alanine racemase [Methylotenera sp. 301]
          Length = 358

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 154/364 (42%), Gaps = 18/364 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +      I L A ++N+          +  AV+K NAYG G    A A        F V 
Sbjct: 2   SRPAIAHIRLDAFRHNYRVAKQAHAG-KALAVIKANAYGHGAVHCAKA-IEGEADGFAVA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE ++LR       I +L G     E      N + ++                    
Sbjct: 60  CLEEALQLREAGIPEPILLLEGFFEAIELPEIVANDLWIVVHAQWQVEILFAAKLAKPLH 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+GL   E +       N K     ++++H A AD+ SS+    Q+E F+
Sbjct: 120 VWLKMDSGMHRVGLPPDEYVQAYERLKNHKNVGKIVLMTHFANADNVSSNHTLQQIETFQ 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
                    E SLA+S+ IL         TRPGI LYG    +     ++ V+   ++II
Sbjct: 180 NTTQGLSA-EISLANSAAILGWKQAKCDWTRPGIMLYGADPLMKADAKLKPVMQLTSKII 238

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            I     GE + YG      RD+++ V A GYADGYP +              G    + 
Sbjct: 239 SISNVKQGESIGYGSIFTAERDTVVGVVACGYADGYPRSA-----------VTGTPIAVD 287

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G M  ++G+++MDM   D+TD  +  +G  ++++G  +  + VA ++GT  Y+L      
Sbjct: 288 GKMTRLIGRVSMDMLFVDLTDIPNATIGSQVELWGNQVSANAVATSAGTIAYELFCN--- 344

Query: 364 RYAK 367
              +
Sbjct: 345 -VKR 347


>gi|271501945|ref|YP_003334971.1| alanine racemase [Dickeya dadantii Ech586]
 gi|270345500|gb|ACZ78265.1| alanine racemase [Dickeya dadantii Ech586]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 162/373 (43%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       ID  AL++N   +  ++  +R  A+VK NAYG G  + A A  +     +
Sbjct: 1   MKT---ATAVIDRQALRHNLQRIRQMAPQSRLIAIVKANAYGHGALEAARAFSD--ADGY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ + E + LR       I +L G     E  +   + +       +     +      
Sbjct: 56  GVSRLSEALVLRAAGITKPILLLEGFFDADELPLLAEHQLETAVHSEEQLAALEQARLPH 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++DTG +RLG+  + A  F         + Q   I+SH   AD+P       QL
Sbjct: 116 PLTVWMKLDTGMHRLGVLPEHADAFYTRLCNCTNVVQPVNIMSHFCRADEPEVDTTQRQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VV 236
           + F   +    G   S+A+S GILL P  H    RPGI  YG +               +
Sbjct: 176 DCFDAFVQGKPG-RQSIAASGGILLWPQAHRDQIRPGIIQYGISPLAQGDASQWQLKPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +++I +R+  AGE V YG      RD+ + V AIGY DGYP                
Sbjct: 235 TLTSQLIAVREHHAGEPVGYGSNWVSPRDTRLGVVAIGYGDGYPRDAKN----------- 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   ++ G  VP+ G+++MDM   D+      +VGD + ++G  + +++VA  +G + Y+
Sbjct: 284 GTPVWVNGREVPLSGRVSMDMLTVDLGPDAQDKVGDEVILWGGPLPVENVAAYNGISAYE 343

Query: 357 LLVRIGTRYAKFY 369
           L+ R+  R    Y
Sbjct: 344 LITRLTARTQLEY 356


>gi|238918209|ref|YP_002931723.1| alanine racemase [Edwardsiella ictaluri 93-146]
 gi|259710066|sp|C5BCC5|ALR_EDWI9 RecName: Full=Alanine racemase
 gi|238867777|gb|ACR67488.1| alanine racemase, putative [Edwardsiella ictaluri 93-146]
          Length = 363

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 109/369 (29%), Positives = 172/369 (46%), Gaps = 20/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N+  +   + ++R  AVVK NAYG G  + A  L       + V  + 
Sbjct: 4   ATAIIDRRALRHNFQQIRKFAPHSRLIAVVKANAYGHGLLETAKILNQ--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFSASDLPVLVANNIETAVHSEEQLQALENAGLERPIRVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F         + Q    +SH +CAD+P S    VQL  F   
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYRRLCACPNVAQPVNFMSHFSCADEPDSGRTEVQLACFDDF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV-----VTAEA 240
           +    G E S+A+S GILL P  H  + RPGI +YG + + + S           +T ++
Sbjct: 182 VRGKTG-EQSIAASGGILLWPQSHRDMVRPGIIMYGVSPQADLSLAADHYGLQPAMTLQS 240

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   
Sbjct: 241 SLIAVREHKAGEPVGYGGAWVAQRDTRLGVVAIGYGDGYPRSA-----------PSGTPV 289

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G  VPI+G+++MDM   D+    +  VGD + ++GP + ++ VA  +G + Y+L+ +
Sbjct: 290 LINGREVPIVGRVSMDMISVDLGPQAADRVGDNVIMWGPGLPVEKVAACTGISAYELITK 349

Query: 361 IGTRYAKFY 369
           + +R A  Y
Sbjct: 350 LTSRVAMEY 358


>gi|307718295|ref|YP_003873827.1| hypothetical protein STHERM_c05940 [Spirochaeta thermophila DSM
           6192]
 gi|306532020|gb|ADN01554.1| hypothetical protein STHERM_c05940 [Spirochaeta thermophila DSM
           6192]
          Length = 391

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 160/373 (42%), Gaps = 25/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             I L+ L++N   +    G  R   A VK +AYG G  ++   L   GV+   V + EE
Sbjct: 8   AVIYLSHLRHNLREIRRRVGEGRMVCAAVKADAYGHGAVEVGKVLVEEGVEMLGVATPEE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G +L      AR+ +L        ++  +  L   +     +   +++    G      +
Sbjct: 68  GAEL--AGVGARVLLLGLTDGAGLELAVEAGLELAVGDREYVREVARVARAKGRRVRVHV 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VDTG  R G + +EA+          + +L+ + +H   +D+        Q+ERF  ++
Sbjct: 126 EVDTGMGRTGCAPEEAVGVVEEVEGAGVLELAGMWTHFPSSDEADDGFTEAQVERFLQVV 185

Query: 187 SHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTAE 239
              +           A+S GI+  P     + RPGISLYG      +     +  V+   
Sbjct: 186 GRVRARGISPGLLHAANSGGIIGHPPSWLDMVRPGISLYGYYPSEEQERTLSLLPVMEFV 245

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++++ ++K   G  VSYG   +  RD+ IA  A GYADGY   LS              +
Sbjct: 246 SQVVFLKKVRKGTPVSYGRTWRAPRDTWIATVAAGYADGYSRLLSSR-----------AE 294

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD---IKLDDVALASGTTNYD 356
             I+G   P++G++ MD  M D+     +   D + +FGPD      +++A   GT  Y+
Sbjct: 295 VLIRGRRYPVVGRVCMDQFMVDVGPHPRVRRYDRVVLFGPDPSGPSAEELARLVGTIPYE 354

Query: 357 LLVRIGTRYAKFY 369
           +   +  R  + Y
Sbjct: 355 ITCAVSRRVPRLY 367


>gi|78356590|ref|YP_388039.1| alanine racemase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
 gi|78218995|gb|ABB38344.1| alanine racemase [Desulfovibrio desulfuricans subsp. desulfuricans
           str. G20]
          Length = 388

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 156/387 (40%), Gaps = 33/387 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E L  +IDL AL++N+ ++ +  G   R  AVVK +AYG G   +A  L   G   F V 
Sbjct: 8   EPLWAEIDLCALRHNFSAVRSHVGKGVRIMAVVKADAYGHGAVAVAHELLRQGADAFGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E V+LR       + +     P +  ++    +I  + S          +       
Sbjct: 68  RLDEAVELRENGITQPVLIFGPTPPQKAPLLARYGIIQTVHSDTYAEALQAALLAQQPRR 127

Query: 124 Y---ALQVDTGFNRLGLSLQ------EALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                ++VDTG  RLG                    ++ +  +  + +H A +D      
Sbjct: 128 RVQVHIKVDTGMGRLGYIATGNGGDVPLGQVFAGFSSRTMLDVCGVFTHFAASDAADPVT 187

Query: 175 NSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              QL  F   +S         +    A+S+  ++ P   F + RPGI LYG        
Sbjct: 188 ARRQLAVFEQALSELPAGMRDRLCVHAANSAATMVMPGARFDMVRPGIILYGLRPSAEMD 247

Query: 230 ---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++ V++ + RI  +++  AG  VSYG        ++IA    GYADGY   LS  
Sbjct: 248 TAGFDLRPVMSLKGRIASVKRVPAGFTVSYGHTHVTAAGTVIAAVPAGYADGYSRLLSSC 307

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                      G   + G    + G++ MD TM D+     ++ GD + + G      + 
Sbjct: 308 -----------GTMLVHGRPAAVTGRVCMDQTMIDVGHIDGVQEGDEVVLLGRQGAESVT 356

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
            DD A  + T NY+++ RI  R  + Y
Sbjct: 357 ADDHARLTSTINYEVVSRILARVPRVY 383


>gi|198274372|ref|ZP_03206904.1| hypothetical protein BACPLE_00517 [Bacteroides plebeius DSM 17135]
 gi|198272738|gb|EDY97007.1| hypothetical protein BACPLE_00517 [Bacteroides plebeius DSM 17135]
          Length = 821

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 151/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRNKLKPETKIVCMVKASAYGAGSFEIAKTLEDQRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     + I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GADLRKAGINSSIIIMNPEITA-FKTMFDYRLEPEVYSFHLLEELIKAAEREGVSNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG +  E          +       + SHL  +D +        Q+E F  
Sbjct: 582 IKIDTGMHRLGFAPSEIPQLVQRLQKQSAVIPRSVFSHLVGSDAERFDAFTRHQIETFEA 641

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +         I   + +++GI   P   F + R GI LYG     NK      V T +
Sbjct: 642 ASTTLQEGFKHKIIRHICNTAGIERYPGAQFDMVRLGIGLYGVDPFTNKML--HNVTTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +  A E V Y  +  LTRDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPADETVGYSRKGVLTRDSRIAAIPIGYADGLNRHLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKAPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSDILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|161524411|ref|YP_001579423.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|189350834|ref|YP_001946462.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|221198343|ref|ZP_03571389.1| alanine racemase [Burkholderia multivorans CGD2M]
 gi|221208282|ref|ZP_03581286.1| alanine racemase [Burkholderia multivorans CGD2]
 gi|221215437|ref|ZP_03588401.1| alanine racemase [Burkholderia multivorans CGD1]
 gi|160341840|gb|ABX14926.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|189334856|dbj|BAG43926.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|221164621|gb|EED97103.1| alanine racemase [Burkholderia multivorans CGD1]
 gi|221171930|gb|EEE04373.1| alanine racemase [Burkholderia multivorans CGD2]
 gi|221182275|gb|EEE14676.1| alanine racemase [Burkholderia multivorans CGD2M]
          Length = 356

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 152/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRYAGPSKVWAVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPSIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
             ++  G    LA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAANIAGAR-CLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQSIGKGQAIGYGSTFSAPAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALSIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|71901892|ref|ZP_00683951.1| Alanine racemase [Xylella fastidiosa Ann-1]
 gi|71728346|gb|EAO30518.1| Alanine racemase [Xylella fastidiosa Ann-1]
          Length = 369

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 101/369 (27%), Positives = 167/369 (45%), Gaps = 19/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N+     L G  +  AVVK +AYG G  + A AL    V  F V  
Sbjct: 9   RPAHAVIDLDALRHNYRFARRL-GGGKALAVVKADAYGHGAVRCAQALEAE-VDGFAVAC 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    QA I +L G    +E  +   + +  + +                   
Sbjct: 67  IEEALELRQAGIQAPILLLEGFFEVEELELIAKHNLWTVIASSWQVRALAAFHSPSPIGV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLGL  +E  D   +  +       ++++HLA AD+  +   + Q   F  
Sbjct: 127 WLKLDSGMHRLGLEPKEFRDAWMSLHSLPQVGEVVLMTHLARADELDNPRTNEQASVFAH 186

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
                    AS+ +SSG+L     +    RPG+ LYG         + S P++ V+   +
Sbjct: 187 ASQGMVA-PASVCNSSGLLGWAGLYSDWGRPGLMLYGVNPISQESTSLSGPLRPVMMVYS 245

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I +R+  AGE V YG      R + + V A+GYADGYP                G   
Sbjct: 246 KLIAVRELPAGEPVGYGASFVTERPTRVGVVAMGYADGYPYFAVN-----------GTPL 294

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G + P++G+++MDM   D+TD    +VG  +Q++G    + ++A     + Y LL  
Sbjct: 295 LVDGRVCPLIGRVSMDMLTVDLTDHPQADVGSQVQLWGVQPGVAELAAHCNLSAYQLLSG 354

Query: 361 IGTRYAKFY 369
           +  R  ++Y
Sbjct: 355 L-KRVRRYY 362


>gi|225378153|ref|ZP_03755374.1| hypothetical protein ROSEINA2194_03813 [Roseburia inulinivorans DSM
           16841]
 gi|225209959|gb|EEG92313.1| hypothetical protein ROSEINA2194_03813 [Roseburia inulinivorans DSM
           16841]
          Length = 390

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 169/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M+ +  +   IDL+A+ +N  +M   +  + +  AV+K + YG G   IA  + +   V 
Sbjct: 1   MNKHSRVCANIDLSAVMHNMEAMHQNIDPDTKIMAVIKADGYGHGAVPIAKEIEHLDYVY 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            +   +VEEG+ LR    Q  I +L  I P Q + +    + P + ++      S     
Sbjct: 61  GYAAATVEEGMILRNNGIQKPILILGYIFPDQYEEVIQAEICPSVFTLEMAKELSAAAEK 120

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G        VDTG +R+G  + +EA D            +  I +H A AD+       
Sbjct: 121 VGKDCRMHFAVDTGMSRIGYQVTEEAADEMAQIAKLPHMIVEGIFTHFAKADEYDKTFTK 180

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+++FR +I+  +           ++S+GI      +  + R GI+LYG          
Sbjct: 181 EQIQKFRKMIAMMEDRGVSIPVKHCSNSAGIAEIREANMDMVRAGITLYGLWPSEEVDQN 240

Query: 232 M---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
               + V+  +  +  ++   AG  +SYGG     RDS IA   +GYADGY   LS    
Sbjct: 241 SLDLKPVMELKTHVAYVKDLEAGRAISYGGTFITKRDSRIATIPVGYADGYCRGLSNT-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PI G++ MD  M D+TD   +++GD + + G D    I ++
Sbjct: 299 ---------GSVLIHGKRAPICGRVCMDQFMVDVTDIPDVKIGDEVTLIGRDGDEVITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +V   SG  NY+ +  +G R  + +
Sbjct: 350 EVGSLSGRFNYEFVCVLGKRIPRVF 374


>gi|304312030|ref|YP_003811628.1| Alanine racemase, catabolic [gamma proteobacterium HdN1]
 gi|301797763|emb|CBL45985.1| Alanine racemase, catabolic [gamma proteobacterium HdN1]
          Length = 362

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 23/374 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R  +D++AL++N+  +  L+   R  A++K +AYG G   IA AL +     F V 
Sbjct: 2   SRSTRAVVDISALRHNYQRLRTLAQGRRVMALMKADAYGHGALGIASALPD--ADAFGVA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            + E V+LR    +A I +L G     E        + V+    +   + K  S      
Sbjct: 60  YLGEAVQLREAGVRAPIVLLEGAMAIDELAYAAALDLAVVIHQHEQLQWLKNSSLSRPLT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL-----SLIISHLACADDPSSHVNSVQ 178
             L+VDTG +RLG++  EA          +          +++SHLACAD P   + + Q
Sbjct: 120 IWLKVDTGMHRLGIAPSEAASVLAELECLQRAPDPKVREVVVMSHLACADLPDHPMTAQQ 179

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
           L+ F+ +     G + S+A+S+G+LLG ++ F   RPGI LYGG+ + ++S     ++ V
Sbjct: 180 LKAFQEVTRGVGG-QRSIANSAGLLLGDDFGFDWVRPGIMLYGGSPRNDRSAEQLGLRAV 238

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   A II IR   AGE V YG      RD+ + + A+GY DGYP             V 
Sbjct: 239 MKLVAPIIAIRTVAAGESVGYGASWVAERDTRVGIVAVGYGDGYPRH-----------VR 287

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    + G    +LG+++MDM   D++   + ++GD ++++GP + ++ VA  +GT NY
Sbjct: 288 AGACVLLHGCECLLLGRVSMDMLAIDLSAV-NAQLGDEVELWGPSLPVERVANWAGTINY 346

Query: 356 DLLVRIGTRYAKFY 369
           +L  +I  R  + Y
Sbjct: 347 ELFCQITGRVRREY 360


>gi|145596368|ref|YP_001160665.1| alanine racemase [Salinispora tropica CNB-440]
 gi|189027392|sp|A4XBI0|ALR_SALTO RecName: Full=Alanine racemase
 gi|145305705|gb|ABP56287.1| alanine racemase [Salinispora tropica CNB-440]
          Length = 372

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/377 (25%), Positives = 155/377 (41%), Gaps = 27/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +++DL A++ N   + +    A   AVVK + YG G    A A  + G     V +++
Sbjct: 4   AEVRVDLDAIRENVSWLRS-GSAAELMAVVKGDGYGHGMVPAAHAALDGGADWLGVCTLD 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR       +                  +   ++SV Q           G      
Sbjct: 63  EALTLRRAGITVPVLAWLLAPGLPLHEGVTAGIDLGVASVAQLEEMVEAGRVAGRPARLH 122

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           L++DTG +R G ++ E  +    +   +         + SH   AD P       QL  F
Sbjct: 123 LKIDTGLSRGGATISEWPELLDAAAKAQADGAVEVVGVWSHFVYADAPGHPTTDRQLAVF 182

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +     +  +     LA+S+  L  P+ HF L RPG+++YG +    +   ++  +T
Sbjct: 183 HEGLGMVEKAGLRPRYRHLANSAATLTRPDAHFDLVRPGLAVYGLSPVAGERFGLRPAMT 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           A AR++L ++  AG  VSYG      R S +AV  +GYADG P   S             
Sbjct: 243 ARARVMLTKQVPAGAGVSYGHTYTTDRASNLAVIPLGYADGVPRDASNS----------- 291

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
           G   + G    I G++ MD  + D  D   +  GD   +FG     +   DD A A GT 
Sbjct: 292 GPVQLGGVRRTISGRVCMDQFVLDCGDDP-VAPGDVATLFGTGRDGEPTADDWAEAVGTI 350

Query: 354 NYDLLVRIGT-RYAKFY 369
           NY+++ R G+ R  + Y
Sbjct: 351 NYEIVTRFGSTRVPRCY 367


>gi|88800247|ref|ZP_01115814.1| alanine racemase [Reinekea sp. MED297]
 gi|88776962|gb|EAR08170.1| alanine racemase [Reinekea sp. MED297]
          Length = 358

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 165/371 (44%), Gaps = 20/371 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R  I  +AL +N   +   +  A   AV+K NAYG G +  A AL       F V+
Sbjct: 2   SRGTRALISRSALTHNLGRVRHYAPQANIWAVIKANAYGHGADVAAEALSA--ADGFAVS 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S++E + LR       I +L G+             +  +          +  +      
Sbjct: 60  SLDEAIALRDSGVSHPILLLSGVTQADHWAEAAALGLHCVVHSRTQVEQIRTQTLPSPLS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERF 182
             L++D+G +RLGL+ +                +   ++H+A AD P   +    Q E F
Sbjct: 120 VWLKIDSGMHRLGLTPENVPAAFSALSQVSNVSVIGALTHMASADVPERDNATRQQFEVF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
           +   +    ++ S+ +S+ IL   +      RPGI LYG T         + +Q V+  E
Sbjct: 180 QA--ASPATLQTSVGNSATILRHADCVGDWVRPGIMLYGATPTTEASAADYGLQPVMAFE 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A +I +R   AGE V YG + + +R + IA  A GY DGYP                G  
Sbjct: 238 APVIAVRDIAAGESVGYGHRWQASRPARIATLAAGYGDGYPRHA-----------PDGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
            ++ G  VPI G+++MD+   D++     ++VGD  Q++GP++ +DDVA   GT  Y+LL
Sbjct: 287 VWLGGQRVPIAGRVSMDLITVDVSLLSEEVKVGDMAQLWGPELPVDDVAEHIGTIGYELL 346

Query: 359 VRIGTRYAKFY 369
            R+  R  K +
Sbjct: 347 TRLSLRVPKVF 357


>gi|238752148|ref|ZP_04613630.1| Alanine racemase 1 [Yersinia rohdei ATCC 43380]
 gi|238709621|gb|EEQ01857.1| Alanine racemase 1 [Yersinia rohdei ATCC 43380]
          Length = 359

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 171/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPVLVANRIETAVHSIEQLEALEAAELSAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  K + Q   I+SH + AD+P       QL+ F + 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSDCKNVIQPVNIMSHFSRADEPLIETTRQQLDCFDSF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G + S+A+S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 ATGKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPMDEPYASHFNLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G    I
Sbjct: 241 IAVREHKAGESVGYGGTWVSERDTRLGVVAIGYGDGYPRSA-----------PSGTPMLI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVGIVGRVSMDMISVDLGPDATDKVGDEVLLWGAELPVETIAARTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|325286092|ref|YP_004261882.1| Alanine racemase [Cellulophaga lytica DSM 7489]
 gi|324321546|gb|ADY29011.1| Alanine racemase [Cellulophaga lytica DSM 7489]
          Length = 368

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 94/369 (25%), Positives = 156/369 (42%), Gaps = 19/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L  L+ N+  +   L+ N    AVVK  AYG    +IA  +   G     V    E
Sbjct: 9   LEINLNYLEQNYKYLKSKLAPNTMFLAVVKAFAYGSDQVQIAKKITELGADYLAVAYTSE 68

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
           GV +R    Q  I VL+      E+I+       + S+     F     S     +P  L
Sbjct: 69  GVAIRKAGIQTPILVLHPQEVNFEEIVAYNLEPSIYSARILDQFIKYTSSINKEDYPVHL 128

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRTL 185
           + +TG NRLG    +              +++   SH+A ++D         Q+++F+++
Sbjct: 129 KFNTGLNRLGFLKADVPQIVQKIQETTTIKVASAFSHMAASEDLTEKEFTEQQIQKFKSI 188

Query: 186 ISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +   G+        + ++SGIL  P+ HF + R GI LYG  +       ++ + + + 
Sbjct: 189 SNTLDGLLCYSPIKHMCNTSGILNYPDAHFNMVRSGIGLYGFGNDAKYDVYLKPIASLKT 248

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  +      + V Y    K T   + A   +G+ADG                   G  
Sbjct: 249 VISQLHNLDPNQSVGYNMAYKATHKMVTATLPLGHADGIYRIYGNQ----------KGFV 298

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           FI G   PI+G   MDM M D+T+  + + GD + +F      D +A A+GT +Y+L+  
Sbjct: 299 FINGKKAPIVGNTCMDMIMVDVTNI-NCKEGDEVIVFNEVHTADALATAAGTISYELVTG 357

Query: 361 IGTRYAKFY 369
           I  R  + +
Sbjct: 358 ISQRVNRVF 366


>gi|223041769|ref|ZP_03611961.1| alanine racemase [Actinobacillus minor 202]
 gi|223017420|gb|EEF15839.1| alanine racemase [Actinobacillus minor 202]
          Length = 374

 Score =  278 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 161/380 (42%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISQEALRHNIQLIKTFAPKQKLLAMIKANAYGQGLLPAAGTLSDL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLT------------- 110
           + E ++++      +I ++ G     +           VI  + QL              
Sbjct: 61  LREALEIQETGYTGKIVLVEGFFDREELLKTLSRRFDTVIHCLEQLELLEQVAKEWDEEQ 120

Query: 111 ---FYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
              F+ +           L++DTG +RLG+  ++   F        L      +SH + A
Sbjct: 121 RKGFWKRKAKIYFPVHIWLKIDTGMHRLGVHPEQVEMFYQRLKACSLVASISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           D+        Q+  F      Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DELDCGYTEKQIATFEAATKPYPEHERSISASSGILYWQQAHYDWVRPGIIMHGISPHYE 240

Query: 228 K--SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
              S   + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITSLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDTKLGVIAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G  VPI+G+++MDM   D+      +VGD +  +G D+ ++D
Sbjct: 299 ---------PEGTPVLVNGRKVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIED 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAKHIGVISYELITKLTPRV 369


>gi|229586333|ref|YP_002844834.1| alanine racemase [Rickettsia africae ESF-5]
 gi|259710072|sp|C3PMD1|ALR_RICAE RecName: Full=Alanine racemase
 gi|228021383|gb|ACP53091.1| Alanine racemase [Rickettsia africae ESF-5]
          Length = 355

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 181/365 (49%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV S EEG
Sbjct: 6   VEINLSTIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +         L
Sbjct: 66  VNLRNALGLDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLSCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG              VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPLTK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI    
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINSRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+++MD+   D+TD    E+  G   +I G     D +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTNLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRKY 353


>gi|307256278|ref|ZP_07538062.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306865242|gb|EFM97141.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
          Length = 374

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISREALRHNIELIKTFAPQQKLLAMIKANAYGQGLLPAADTLADL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVIS------------SVP 107
           + E ++++      +I ++ G    +E        FDT +                    
Sbjct: 61  LREALEIQETGYTGKILLIEGFFDREELLKTLSRRFDTVIHCQEQLELLEQVAEEWQQEQ 120

Query: 108 QLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
           Q  F+ +           L++DTG +RLG+  ++   F        L +    +SH + A
Sbjct: 121 QKGFWKRKAKIYFPINVWLKIDTGMHRLGVHPEQVDMFYQRLKACPLVESISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+P       Q+  F    S Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DEPDCGYTEKQIAIFEAATSPYPTHERSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLASSLIAVRTHKAGEPVGYGGAWVSDKDTKLGVVAMGYGDGYPRNAQ- 299

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G +VPI+G+++MDM   D+      +VGD +  +G D+ +++
Sbjct: 300 ----------EGTPVLVNGRIVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIEE 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAQHIGVISYELITKLTPRV 369


>gi|240949115|ref|ZP_04753463.1| alanine racemase [Actinobacillus minor NM305]
 gi|240296510|gb|EER47142.1| alanine racemase [Actinobacillus minor NM305]
          Length = 374

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 162/380 (42%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISQEALRHNIQLIKTFAPKQKLLAMIKANAYGQGLLPAAGTLSDL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLT------------- 110
           + E ++++      +I ++ G     +           VI  + QL              
Sbjct: 61  LREALEIQETGYTGKIVLVEGFFDREELLKTLSRRFDTVIHCLEQLELLEQVAKEWDAEQ 120

Query: 111 ---FYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
              F+ +           L++DTG +RLG+  ++   F        L      +SH + A
Sbjct: 121 RKGFWKRKAKIYFPVHIWLKIDTGMHRLGVHPEQVEMFYQRLKACSLVASISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           D+        Q+  F      Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DELDCGYTEKQIATFEAATKPYPEHERSISASSGILYWQQAHYDWVRPGIIMHGISPHYE 240

Query: 228 K--SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
              S   + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITSLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWVSPKDTKLGVIAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G  VPI+G+++MDM   D+      +VGD +  +G D++++D
Sbjct: 299 ---------PEGTPVLVNGRKVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLQIED 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAKHIGVISYELITKLTPRV 369


>gi|206560472|ref|YP_002231236.1| alanine racemase [Burkholderia cenocepacia J2315]
 gi|198036513|emb|CAR52410.1| alanine racemase, catabolic [Burkholderia cenocepacia J2315]
          Length = 356

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|319408978|emb|CBI82637.1| Alanine racemase [Bartonella schoenbuchensis R1]
          Length = 373

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 116/365 (31%), Positives = 193/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + ID+ A+  N+ ++         +AVVK NAYG+G EK+APALY AG + FFV  ++E 
Sbjct: 19  VTIDIGAIVANYTALAQHVAPTECSAVVKANAYGIGVEKVAPALYQAGCRTFFVAQIKEA 78

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           ++L+   P    + +L G+ P  E+ +    ++PV++S  ++  +           P  +
Sbjct: 79  LQLKNILPSDVTLALLNGLPPAAEEFVAQAGIVPVLNSWHEIESWQILCQEKSKKFPAIV 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E           ++  +  IISHL+  DD +   N  QL   +T++
Sbjct: 139 QIDTNMNRLGLDQKELQQLIKCPTLFEVADIKYIISHLSNGDDFTHSSNDTQLTTIKTML 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     + SLA+S GI LGP+++F L RPGI+LYG       + P++ V+  EA++I  R
Sbjct: 199 AQLPACKVSLANSGGIFLGPDFYFDLVRPGIALYGINLHKKHTVPIKPVLKLEAQVIQSR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  + YGG     R S++   +IGYADG+   LS             G  + KGY 
Sbjct: 259 FVEEGVPIGYGGSFITRRPSVLTTISIGYADGWMRNLSN-----------KGSVYFKGYK 307

Query: 307 VPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+I+MD  + D TD      + GD++++ G    ++DV++ + T  +++L  +  R
Sbjct: 308 LPIVGRISMDSIIVDATDLEHGKPKRGDWVELIGEHQTIEDVSIDANTVPHEILSSLSAR 367

Query: 365 YAKFY 369
             + Y
Sbjct: 368 CKRIY 372


>gi|307245065|ref|ZP_07527159.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|307249464|ref|ZP_07531453.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|307254020|ref|ZP_07535868.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307258475|ref|ZP_07540213.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
 gi|306854053|gb|EFM86264.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|306858538|gb|EFM90605.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 4 str.
           M62]
 gi|306863046|gb|EFM94992.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306867480|gb|EFM99330.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 11 str.
           56153]
          Length = 381

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 35/388 (9%)

Query: 1   MHSNE----FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M S++         I   AL++N   +   +   +  A++K NAYG G    A  L +  
Sbjct: 1   MKSSKKVMKPATATISREALRHNIELIKTFAPQQKLLAMIKANAYGQGLLPAADTLADL- 59

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVIS------- 104
           V+ F V  + E ++++      +I ++ G    +E        FDT +            
Sbjct: 60  VEGFGVARLREALEIQETGYTGKILLIEGFFDREELLKTLSRRFDTVIHCQEQLELLEQV 119

Query: 105 -----SVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL 159
                   Q  F+ +           L++DTG +RLG+  ++   F        L +   
Sbjct: 120 AKEWQQEQQKGFWKRKAKIYFPINVWLKIDTGMHRLGVHPEKVDMFYQRLKACPLVESIS 179

Query: 160 IISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL 219
            +SH + AD+P       Q+  F    S Y   E S+++SSGIL     H+   RPGI +
Sbjct: 180 FVSHFSRADEPDCGYTEKQIAVFEAATSPYPTHERSISASSGILYWKQAHYDWVRPGIIM 239

Query: 220 YGGTDK--INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
           +G +           + V+T  + +I +R   AGE V YGG     +D+ + V A+GY D
Sbjct: 240 HGISPHYTPITDLGFKPVMTLASSLIAVRTHKAGEPVGYGGAWVSDKDTKLGVVAMGYGD 299

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP                G    + G +VPI+G+++MDM   D+      +VGD +  +
Sbjct: 300 GYPRNA-----------PEGTPVLVNGRIVPIVGRVSMDMLTVDLGADSQDKVGDEVIFW 348

Query: 338 GPDIKLDDVALASGTTNYDLLVRIGTRY 365
           G D+ +++VA   G  +Y+L+ ++  R 
Sbjct: 349 GKDLLIEEVAQHIGVISYELITKLTPRV 376


>gi|293401062|ref|ZP_06645207.1| alanine racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306088|gb|EFE47332.1| alanine racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 382

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/388 (25%), Positives = 157/388 (40%), Gaps = 31/388 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S+    L+IDL+ + +N   +  L  +  +  A+VK NAYG G    A  L   G+  F 
Sbjct: 4   SDTRAWLEIDLSKISHNVKEIQKLLPSTSKIMAIVKANAYGHGDVACAKELSRCGIDFFG 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGV 120
           V+SV+EG+ LR    +  I +L    P     +   +LI    S+       +     GV
Sbjct: 64  VSSVDEGISLREGGIREPILILGYTPPVHFHQVIQHDLIQTFLSLDYAKKANAWCKEHGV 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA------DDPSSHV 174
                ++VDTG +RLG+  Q+                  +    +        D+ +   
Sbjct: 124 IMHGHVKVDTGMSRLGIITQQQDYRIEEVKEVYHLPHIAVDGIFSHFSVSDGLDEDNKAY 183

Query: 175 NSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              Q+  F  ++   +          L +S GIL  P+  +   RPG+   G T      
Sbjct: 184 TRKQIMLFDQVLKDLEDAGIDVGIRHLQNSYGILNYPDLKYDYVRPGLLFLGATSDDAID 243

Query: 230 HPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                     +  +A I +++    G  VSYG      R S IA  +IGYADGYP ++S 
Sbjct: 244 TITHPDFQPIMQLKANISMVKTIQPGVCVSYGRHFTSERISRIATVSIGYADGYPRSVSN 303

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDI 341
                      G    + G  VPI+G I MD  M D+TD   ++ GD + +FG      +
Sbjct: 304 K----------GACALLHGKRVPIIGNICMDQMMLDVTDIEHVKEGDVVTLFGCDGDEKL 353

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +D++   + T N +    +  R  + Y
Sbjct: 354 PIDELTRLAQTINNETFCWMSARLPRIY 381


>gi|291545833|emb|CBL18941.1| alanine racemase [Ruminococcus sp. SR1/5]
          Length = 389

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/385 (22%), Positives = 156/385 (40%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M   E ++  + L A+ +N+  M   +    +  AV+K + YG G   IA  + +   + 
Sbjct: 1   MKKYERVKALVSLDAIAHNFEEMHKNVKEGTKIIAVIKADGYGHGARAIARLIQDYDYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMS 117
            F   + EE ++LR       + +L  +     + +   ++   IS +     +      
Sbjct: 61  GFATATAEEALELRHAGITKPVLILGLVFEEYYEELAANDIRITISDLNTAAEYAKAGAR 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    L +DTG  R+G   + E               +  + +H A AD+       
Sbjct: 121 IGKNVHIHLALDTGMTRIGYADIPENAVKIEKISKIPNLVIEGMFTHFARADETDRSPAL 180

Query: 177 VQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
           VQL+R+                   ++S+GI+  P  +  + R GI++YG          
Sbjct: 181 VQLDRYLRFAELLEKRGVHIPVRHCSNSAGIIRVPEANLNVVRAGITIYGIYPSEEVERD 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +   +  ++ +  ++    G  VSYGG     R + +A   +GYADGYP  LS    
Sbjct: 241 IVKLTPAMELKSHVSYVKNVERGTAVSYGGTFVTERFTRMATIPVGYADGYPRQLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G   PILG++ MD  M D+TD   ++ GD + + G D    I ++
Sbjct: 298 --------KGWVLIRGKKAPILGRVCMDQFMVDVTDIPEVKAGDEVTLMGRDGEEFISVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            +   SG  +Y+ +  I  R  + Y
Sbjct: 350 TLGDLSGRFSYEFVCGISKRVPRVY 374


>gi|227487051|ref|ZP_03917367.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227093125|gb|EEI28437.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 377

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/382 (23%), Positives = 156/382 (40%), Gaps = 29/382 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            + E   L IDL A+ +N   +   +GNA   AVVK NAY  G + + P L  AG+  F 
Sbjct: 8   ETMELTTLTIDLDAIASNAREVQKAAGNADVMAVVKANAYNHGVDLVVPVLEKAGIAGFG 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V ++ E  ++R  T +  +               +   + + S        +      V+
Sbjct: 68  VATIPEARQVREVT-ELPVLAWIWHPEQDLPRQEEHIDLGLASMAQARALAADPTPRTVT 126

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
                 +DTG NR G+  +   +            ++ + +HLACAD+  + +   Q++ 
Sbjct: 127 LV----IDTGLNRSGVDEENWEELCRFVAGVPHLTVTGLFTHLACADEEDNPLTGEQVDT 182

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
               ++             +A+S G+L   +  F   RPG+ LYG +             
Sbjct: 183 LTRALAVARACGLNPTRNHVANSPGVLTKGDLGFSTVRPGLILYGYSPLREGDTAGYTLR 242

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A + +++K  AGE  SYG       D   A+  +GYADG P  + G        
Sbjct: 243 PAMTWSAHVTIVKKIHAGEGASYGMTWHAPTDRYTAIVPVGYADGLPRRMQG-------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVAL 348
                +  I G   P +G++ MD  + D+  +   +  GD   +FGP    ++ +D+ A 
Sbjct: 295 ---KLEVAIGGKRYPQVGRVCMDQIVVDLGPEEPQVHPGDEAFLFGPGDHGEMTVDEWAE 351

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
              T NY++L     R  + Y+
Sbjct: 352 HLETINYEVLCSPRGRVQRTYS 373


>gi|33151809|ref|NP_873162.1| alanine racemase [Haemophilus ducreyi 35000HP]
 gi|71152228|sp|Q7VNC9|ALR_HAEDU RecName: Full=Alanine racemase
 gi|33148030|gb|AAP95551.1| alanine racemase [Haemophilus ducreyi 35000HP]
          Length = 374

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 160/376 (42%), Gaps = 31/376 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             I   AL++N   +  L+   +  A++K NAYG G    A  L +  V  F V  + E 
Sbjct: 6   ATISRQALRHNIQLIKKLAPKQKLLAMIKANAYGQGLLPAAATLADL-VDGFGVARLHEA 64

Query: 69  VKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV------- 120
           ++++      +I ++ G     +           VI  + QL    ++            
Sbjct: 65  LEVQETGYTGKILLVEGFFDREELLKTLSRGFDTVIHCLEQLELLEQVAKEWQIEQQKRF 124

Query: 121 ---------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
                         L++DTG +RLG+  ++   F     +  L      +SH + AD+  
Sbjct: 125 WQRKTKIYFPINIWLKIDTGMHRLGIHPEQVDLFYARLKSCPLVATISFMSHFSRADELD 184

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKS 229
                 Q+  F      Y     S+A+SSGIL  P  H++  RPGI ++G +        
Sbjct: 185 CGYTEQQIATFEMATEQYSAHSRSIAASSGILYWPQAHYEWVRPGIIMHGISPHYQPITQ 244

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              + V+T  + +I IR   AGE V YGG     + + + V A+GY DGYP         
Sbjct: 245 LGFKPVMTLSSTLIAIRSHKAGEPVGYGGAWISDKATTLGVVAMGYGDGYPRNA------ 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALA 349
                  G    I G +VPI+G+++MDM   D+      +VGD + ++G D+ ++ VA  
Sbjct: 299 -----PEGTPVLINGRIVPIVGRVSMDMLTVDLGIDSQDQVGDEVILWGNDLLIETVAQH 353

Query: 350 SGTTNYDLLVRIGTRY 365
            G  +Y+L+ ++  R 
Sbjct: 354 IGVISYELITKLTPRV 369


>gi|259047269|ref|ZP_05737670.1| alanine racemase [Granulicatella adiacens ATCC 49175]
 gi|259036045|gb|EEW37300.1| alanine racemase [Granulicatella adiacens ATCC 49175]
          Length = 371

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 156/378 (41%), Gaps = 27/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   R+ +DL+ +K N   +   L+ + +  AVVK NAYG G   +A A   AGVQ F V
Sbjct: 6   HRNTRVVVDLSIIKQNISKLKSKLNPSKQVYAVVKANAYGHGMIPVAKAALEAGVQGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +V+E + LR       + +L G+   ++  +  +N I       +    +  +   +  
Sbjct: 66  ANVDEALALREAGIMEPVLIL-GLSRVEDAPLLASNHITAAVDSVEWLLQAAPLLKEIPL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              + VD+G  R+G+  ++ L            +   + +H A AD+  +   + Q E+F
Sbjct: 125 KVHVAVDSGMGRIGVVNEKELTEVEAVLRNGPFEFEAMFTHFATADEEDTAHLTKQEEKF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-----INKSHPMQTV 235
             +I   +     +   +S+  +        + R GI LYG         +     +   
Sbjct: 185 NGMIGELEERPPHIHCSNSAYAIWHSAGDSDIIRYGIGLYGINPSNGDLCVEDEELLTPA 244

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  E  ++ ++K   G+ VSYG   K      +A   IGYADGY               +
Sbjct: 245 LQWETEMVKVKKLEIGDTVSYGATYKAKEPQWVATLPIGYADGYIRA------------Y 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
             G+  + G   PI+G++ MD  M  +     +  G  + + G     +I   ++A  + 
Sbjct: 293 NKGEVIVDGVRCPIIGRVCMDQCMVRLPHEYPV--GTKVTLLGKNKEEEITAIELAKRAD 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++  I  R  + Y
Sbjct: 351 TIAYEVICMISDRVKREY 368


>gi|254282682|ref|ZP_04957650.1| alanine racemase [gamma proteobacterium NOR51-B]
 gi|219678885|gb|EED35234.1| alanine racemase [gamma proteobacterium NOR51-B]
          Length = 351

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 108/367 (29%), Positives = 173/367 (47%), Gaps = 19/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    L IDL AL +N     +L+  +R  AV+K +AYG G    A AL       F V 
Sbjct: 2   SRPTLLSIDLDALVHNAKLCQSLAAPSRFMAVIKADAYGHGAVPCARAL-RGIADAFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIF-DTNLIPVISSVPQLTFYSKLMSCGVSH 122
            VEE V+LR       I V+ G+    +     +  L PVI S  QL + S         
Sbjct: 61  LVEEAVELRAAGISEPILVMEGLFSADDMRHIVEHKLWPVIHSRHQLDYLSPEHH---GT 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  L++DTG +RLG+  ++                  ++SHL  A++P + ++  Q++ +
Sbjct: 118 PLWLKIDTGMHRLGIEPEKLPQMLSRIREL-GFSDITLMSHLGDAENPDTALSQRQIDAW 176

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + +   +  +  SL +S+ +           R G  LYGG    N   P++ V++ ++ +
Sbjct: 177 QNITGQHSSV-TSLCNSAAVAQRSVPESSWVRAGYMLYGGQTTPN-PLPLKPVMSFQSAV 234

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           + +R   AGE V YGG+    R S+IA  A GYADGYP +              G    I
Sbjct: 235 MALRTIAAGETVGYGGRWCAQRPSVIATVAAGYADGYPRSA-----------EDGTPVNI 283

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G + P++G+++MDM   D+TD   +++G    ++G    +DDVA  +GT  Y+L  R+ 
Sbjct: 284 GGEIAPLVGRVSMDMVTVDVTDLPGVKIGTPALLWGASPTIDDVANRAGTIGYELTARMP 343

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 344 PRTPRTY 350


>gi|325295168|ref|YP_004281682.1| Alanine racemase [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065616|gb|ADY73623.1| Alanine racemase [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 353

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 165/367 (44%), Gaps = 26/367 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVE 66
             +I L  L +N+  +  +SG  +  AVVK NAYG G  +I+  L +   V  F V + E
Sbjct: 4   WAEIHLNRLFHNYREIKKISGRKKIFAVVKANAYGHGSVRISKFLEDKTDVSGFAVATFE 63

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG +LR    +  I V+        K   D  L PVI     L      +   +  P+ +
Sbjct: 64  EGKELREARIRREILVMASHLEEGYKEAVDYRLTPVIFDFEGLK-----LVKELDIPFHV 118

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG  RLG    E  +        K  ++  I+SH + AD+        Q ++F +  
Sbjct: 119 KIDTGMGRLGFLENEWNELL---SELKYSKVEGIMSHFSSADEDLD-FTKEQFKKFYSFA 174

Query: 187 SH----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           S        I+  + +S+ I +  +      R GI+LYG     +    ++ V+  +A++
Sbjct: 175 SELKQLKPEIKIHIDNSAAIPIKFDSILTHCRVGIALYGSKPYPDYPLNLKQVMEVKAKV 234

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I I++  +   +SY    K ++   +AV + GYADG   +LS             G+  I
Sbjct: 235 ISIKELPSEFPISYSKTYKTSKQEKVAVISFGYADGLLRSLSN-----------KGEVLI 283

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G   PI G+I MDMT+  I + L +  GD   I G  +  +++A  +GT  Y+++  I 
Sbjct: 284 NGRRCPIRGRICMDMTIVSI-EGLKVRKGDTAIISGEKLTFEEIAEKAGTIPYEIMCDIS 342

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 343 PRVKRIY 349


>gi|91206154|ref|YP_538509.1| alanine racemase [Rickettsia bellii RML369-C]
 gi|157826544|ref|YP_001495608.1| alanine racemase [Rickettsia bellii OSU 85-389]
 gi|122425170|sp|Q1RGU4|ALR_RICBR RecName: Full=Alanine racemase
 gi|91069698|gb|ABE05420.1| Alanine racemase [Rickettsia bellii RML369-C]
 gi|157801848|gb|ABV78571.1| alanine racemase [Rickettsia bellii OSU 85-389]
          Length = 410

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 129/416 (31%), Positives = 191/416 (45%), Gaps = 65/416 (15%)

Query: 9   LKIDLTALKNNWHSMNAL-----------------SGNAR-------------------- 31
           L+I+L+A+K N+  +  +                 +GN                      
Sbjct: 6   LEINLSAIKANYRLLKNICENSVDFLHNVANKEEFAGNTSPRTAAYTLVREDASLGSTPK 65

Query: 32  ------------TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY-TPQA 78
                         A VK N+YGLG  +I+  L     + FFV S  EG+ LR     + 
Sbjct: 66  LPLGASYAKNLLVGAAVKANSYGLGAIEISKTLLEENCRYFFVASSNEGISLRKAIGDEV 125

Query: 79  RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYALQVDTGFNRLGL 137
            I +L G+       + + NLIPV++++ Q+  + K  +      P  L  +TG NRLGL
Sbjct: 126 NILILNGVFEHDALELIEYNLIPVLNNLNQIKIWQKFSNLKNQLLPCYLHFNTGINRLGL 185

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
           +  E     +N    K   +  IISHL+ ++D  +  N  QL +F+  + ++   +ASLA
Sbjct: 186 NHNEIEQLINNRDLLKGLNVEYIISHLSASEDSDNPYNLEQLNKFKAYLEYFPNAKASLA 245

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEARIILIRKALAGELVSY 256
           +S GI LG +YHF L RPG +LYG      NK +PMQ  VT +A II ++    G  + Y
Sbjct: 246 NSGGIFLGKDYHFNLVRPGAALYGLNPLGSNKPNPMQNPVTLKAPIIHLQNLTYGSRIGY 305

Query: 257 GGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMD 316
                  RDSLIA    GYADG+    S             G  FI    VPI+G+I+MD
Sbjct: 306 NMTFTTKRDSLIATLPFGYADGFSRNFSNQ-----------GTVFINSRNVPIIGRISMD 354

Query: 317 MTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
           +   D+TD     I +G  ++I G +   D +A   GT  Y++L  +G RY + YT
Sbjct: 355 LVNIDVTDLPPSDIFLGQEVEIIGNNCTPDKIADIIGTIGYEILTSLGNRYKRIYT 410


>gi|294776870|ref|ZP_06742333.1| alanine racemase [Bacteroides vulgatus PC510]
 gi|294449346|gb|EFG17883.1| alanine racemase [Bacteroides vulgatus PC510]
          Length = 821

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+   +  V T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQ--IIHNVSTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKAPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|254883405|ref|ZP_05256115.1| alanine racemase [Bacteroides sp. 4_3_47FAA]
 gi|319644253|ref|ZP_07998766.1| alanine racemase and UDP-N-acetylmuramoylalanyl-D-glutamyl
           [Bacteroides sp. 3_1_40A]
 gi|254836198|gb|EET16507.1| alanine racemase [Bacteroides sp. 4_3_47FAA]
 gi|317384244|gb|EFV65216.1| alanine racemase and UDP-N-acetylmuramoylalanyl-D-glutamyl
           [Bacteroides sp. 3_1_40A]
          Length = 821

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+   +  V T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQ--IIHNVSTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKAPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|327438475|dbj|BAK14840.1| alanine racemase [Solibacillus silvestris StLB046]
          Length = 372

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 91/385 (23%), Positives = 156/385 (40%), Gaps = 30/385 (7%)

Query: 1   MHSN---EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M++       +  IDL A+ +N  S+   +    +  AVVK NAYG G  ++A     AG
Sbjct: 1   MNTPIYYRPTKAVIDLQAITHNISSLQNYIGPKIQIIAVVKANAYGHGDVEVAKTAIEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V + +E V +R       I VL              N+I  + S   L    +  
Sbjct: 61  ATMLAVATPDEAVHIRENFKDIDILVLGASPHTFIPFASAENIILTVFSTEWLQLAQQYT 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                    ++VD+G  R+G+S  +E ++      +     +  I +H A AD+  S   
Sbjct: 121 PLLNQLRLHIKVDSGMGRIGVSTKEELMELYTMINSSDDFLVDGIFTHFATADEEDSMYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDK----INK 228
             Q   F+  +         +    +++ ++  P+ H+   R GIS+YG           
Sbjct: 181 DNQATLFKDFLGALPQKPRLVHVANTATALVKDPSLHYDAVRFGISMYGLLPSSYVGTKL 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             P++   + +  ++ I+K  AG+ V YG       D  I    IGYADG    LSG   
Sbjct: 241 PFPIKPAFSLQTELVHIKKMQAGQSVGYGATYTAEEDCYIGTIPIGYADGMIRKLSGQ-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                     +  + G    I+G+I MD +M  + ++ ++  G+ + + G     +I +D
Sbjct: 299 ----------EVLVGGKRAKIVGRICMDQSMILLPEAYNV--GEEVVLIGCQQQEEITID 346

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D A    T NY++   I  R  + Y
Sbjct: 347 DWAHKLQTINYEVPCVITARVPRVY 371


>gi|227502721|ref|ZP_03932770.1| alanine racemase [Corynebacterium accolens ATCC 49725]
 gi|227076451|gb|EEI14414.1| alanine racemase [Corynebacterium accolens ATCC 49725]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 156/372 (41%), Gaps = 22/372 (5%)

Query: 6   FLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L+  IDL A+ +N   +   +  + +   VVK +AYG G E++ P +  AG     V +
Sbjct: 1   MLKTTIDLAAIAHNVRLIKEKIGPDVKLMCVVKADAYGHGAERVVPVMLEAGADSIGVAT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V+LR     + I           +    + +   ++S  Q       +   +    
Sbjct: 61  LTEAVQLRRMGVDSPIAAWIWQSDQVLEEALASGIQIAVNSPAQAQKL---VEAEIPAEI 117

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF-- 182
            ++V+TG +R G+   +  +            +  ++SH ACADDP +  N  Q E F  
Sbjct: 118 YIKVETGMHRSGVDKADWDEVFALLREAPHITVLGLMSHFACADDPDNAHNDTQEEEFRR 177

Query: 183 RTLISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
               +   G+E     LA+S   L  P+ HF   R GI+ YG      + H ++  +T  
Sbjct: 178 ALDAARAAGLECPVNHLANSPATLSRPSAHFDQVRVGIACYGLEPIAGRDHGLRPAMTWS 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             +  ++     E  SYG      +   +A    GYADG P    G             +
Sbjct: 238 GNVFGVKPIDKNEATSYGRTWSADKPGFLATVDCGYADGLPRAYQGHL-----------Q 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
             I G + P +G++ MD  + D+ D+   I  GD + IFG   +   ++A A GT NY++
Sbjct: 287 VGIGGRLYPQVGRVCMDQIVVDLGDNPHGIAPGDEVTIFGQGGMSATELADAVGTINYEV 346

Query: 358 LVRIGTRYAKFY 369
           + R   R  + Y
Sbjct: 347 VCRPTGRTEREY 358


>gi|319937488|ref|ZP_08011893.1| alanine racemase [Coprobacillus sp. 29_1]
 gi|319807328|gb|EFW03937.1| alanine racemase [Coprobacillus sp. 29_1]
          Length = 391

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/382 (26%), Positives = 170/382 (44%), Gaps = 32/382 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   ++I+L AL+NN   ++ L  + +   AVVK +AYG G  KI+  L   G+  F V 
Sbjct: 9   DRSWVEINLDALENNVQEISKLLRSRKQIMAVVKADAYGHGAIKISQELEKLGIDCFAVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + LR       I +L    P    ++   +LI  +         + +    +   
Sbjct: 69  TIDEAMILRQNHIHGDILILGFTAPHLAPLLLKYHLIQTVIDYDYGQQLNAMQ---LPLQ 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD---PSSHVNSVQLE 180
             +++D+G +RLG    +        F      +  + SHL  AD       H    Q  
Sbjct: 126 IHIKIDSGMHRLGADYHDLTH-IRRLFELPYLHVEGVFSHLCVADSSKMEDIHFTKQQFL 184

Query: 181 RFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHP 231
            F   I   +       +  + SS G+L  P+YH+   R GI+LYG      D +     
Sbjct: 185 NFNQTIHQLQEFGYDVGKVHIQSSYGLLNYPDYHYDYARMGIALYGVQSSTDDYMKNHLN 244

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q V++ ++ I  +    AG  + YG    L +DSLIAV  +GYADG P  LS       
Sbjct: 245 LQPVLSIQSHIACLHHYPAGSSLGYGRTYTLEKDSLIAVVPLGYADGLPRQLS------- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     ++G  +PI+G+I MD  M D+T    +++ D +   G +    I ++++A
Sbjct: 298 ----QNQDVLVRGKKIPIVGRICMDQLMIDVTSLKDVQLNDIVTFIGHNHQQTIGIEELA 353

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             + T + ++L RIG R  K Y
Sbjct: 354 KNAHTISNEILSRIGQRLPKVY 375


>gi|229011407|ref|ZP_04168598.1| Alanine racemase [Bacillus mycoides DSM 2048]
 gi|229166972|ref|ZP_04294719.1| Alanine racemase [Bacillus cereus AH621]
 gi|228616600|gb|EEK73678.1| Alanine racemase [Bacillus cereus AH621]
 gi|228749924|gb|EEL99758.1| Alanine racemase [Bacillus mycoides DSM 2048]
          Length = 408

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A +   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L                 
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRIH 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFFEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQTSLFEKA 207

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++              ++S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVASLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T+++ ++VGD +  +G      I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVTNAMPVQVGDEVVFYGKQGEEEIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|311740005|ref|ZP_07713839.1| alanine racemase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305078|gb|EFQ81147.1| alanine racemase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 368

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 161/372 (43%), Gaps = 22/372 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L+  IDL+A+ +N   +        +   VVK +AYG G  K+ P +  AG   F V +
Sbjct: 4   MLKTTIDLSAIAHNVRLIKEKVGPEVKLMCVVKADAYGHGAAKVVPVMARAGADCFGVAT 63

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR     A I           +      +   ++S+ Q       +        
Sbjct: 64  LREAVDLRRAGVDAPIVAWIWQTDEILEEALANGIEVAVNSLEQAHKL---VKADFPAEV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V+TG +R G+  ++  +      +    ++  ++SH ACAD+P +  N  Q E FRT
Sbjct: 121 YVKVETGMHRSGVDEEDWAETFKVLRDAPHIKVLGLMSHFACADEPDNPHNDAQEEAFRT 180

Query: 185 --LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              ++   G+E     LA+S  +L  P+ +F+  R G + YG      + H ++  +T  
Sbjct: 181 ALQLAREIGLECPVNHLANSPAVLTRPSSYFEQVRVGAACYGLEPIEGREHGLRPAMTWS 240

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +I  ++    GE   YG   K  +   +A    GYADG P    G              
Sbjct: 241 GQIFNVKPIQPGEGTCYGLTWKADKPGFLATVDCGYADGLPRGYQGDL-----------H 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
             I G++ P +G+I MD  + D+ ++   ++ G    IFG   +   D+A A+GT NY++
Sbjct: 290 VGIGGHLYPQVGRICMDQIVVDLGENPHGVDTGQDAVIFGNGGVSATDLAAAAGTINYEV 349

Query: 358 LVRIGTRYAKFY 369
           +     R  + Y
Sbjct: 350 VCLPDGRTEREY 361


>gi|229059775|ref|ZP_04197152.1| Alanine racemase [Bacillus cereus AH603]
 gi|228719604|gb|EEL71205.1| Alanine racemase [Bacillus cereus AH603]
          Length = 408

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A +   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L                 
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRIH 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFFEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQTNLFEKA 207

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++              ++S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVASLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T+++ ++VGD +  +G      I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVTNAMPVQVGDEVVFYGKQGEEEIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|269137597|ref|YP_003294297.1| alanine racemase [Edwardsiella tarda EIB202]
 gi|267983257|gb|ACY83086.1| alanine racemase [Edwardsiella tarda EIB202]
 gi|304557668|gb|ADM40332.1| alanine racemase [Edwardsiella tarda FL6-60]
          Length = 363

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 170/369 (46%), Gaps = 20/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N+  +   + ++R  AVVK NAYG G  + A  L+      + V  + 
Sbjct: 4   ATAIIDRRALRHNFQQIRKFAPHSRLIAVVKANAYGHGLLETAKILHQ--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G     +  +   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFSASDLPVLVANNIETAVHSEEQLQALENARLERPIKVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F         + Q    +SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYRRLCTCPNVAQPVNFMSHFSRADEPECGRTEQQLACFDDF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV-----VTAEA 240
           +    G E S+A+S GILL P  H  + RPGI +YG + + + S           +T ++
Sbjct: 182 VQGKAG-EQSIAASGGILLWPQSHRDMVRPGIIMYGVSPQADLSLAADHYGLQPAMTLQS 240

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   
Sbjct: 241 SLIAVREHKAGEPVGYGGAWVAQRDTRLGVVAIGYGDGYPRSA-----------PSGTPV 289

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G  VPI+G+++MDM   D+    +  VGD + ++GP + ++ VA  +G + Y+L+ +
Sbjct: 290 LINGREVPIVGRVSMDMISVDLGPQAADRVGDNVIMWGPGLPVEKVAACTGISAYELITK 349

Query: 361 IGTRYAKFY 369
           + +R A  Y
Sbjct: 350 LTSRVAMEY 358


>gi|74318118|ref|YP_315858.1| alanine racemase [Thiobacillus denitrificans ATCC 25259]
 gi|123611457|sp|Q3SH36|ALR_THIDA RecName: Full=Alanine racemase
 gi|74057613|gb|AAZ98053.1| alanine racemase [Thiobacillus denitrificans ATCC 25259]
          Length = 367

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 23/367 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  I   A+ +N       +G AR  AVVK NAYG G    + AL   G    F V 
Sbjct: 2   RPIKASISADAMAHNLRVARRHAGAARVFAVVKANAYGHGL---SRALRAFGAADGFAVL 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++EE   LR       I +L GI   G+     + +L PV+    QL +  +      + 
Sbjct: 59  TLEEAASLRQMGVDKPILLLEGIFDAGEIAACAELDLWPVLHHARQLDWLEQQRPA-RAL 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+ D+G +RLG  L E  +               +++H A ADD +    + QL+ F
Sbjct: 118 EVFLKFDSGMHRLGFPLAEHAEVVARVRALAGVARVTLMTHFAQADDSAG--VAWQLQPF 175

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAE 239
           R  +  + G+  S A+S+ ++  P       RPGI LYG +   +       ++  +T  
Sbjct: 176 REALDGH-GLPWSSANSAALMRYPETVGDWVRPGIMLYGASPFTDVPASGLGLEPAMTLR 234

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE + YG   +  +     V A GYADGYP                G  
Sbjct: 235 SEIIAVQTLAAGEGIGYGQTFRADKPMRAGVVACGYADGYPRHA-----------PTGTP 283

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     LG+++MDM   D+++  +  VG  + ++G  + +DDVA A+GT++Y+LL 
Sbjct: 284 VVVDGRRTRTLGRVSMDMLCVDLSECPAAGVGSAVVLWGDGLPVDDVAAAAGTSSYELLC 343

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 344 ALAPRVP 350


>gi|319780958|ref|YP_004140434.1| alanine racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317166846|gb|ADV10384.1| alanine racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 379

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 180/365 (49%), Gaps = 17/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A++ N+  + A  G+   A V+K + YGLG  ++  AL   G   FFV  + EG
Sbjct: 25  LTIDLGAIRENYRRLKARLGDVACAGVLKADGYGLGAGQVGAALLREGCDIFFVALLGEG 84

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
           V LR        IFVL GI PG E      NL  VI+S  Q   + S     G   P A+
Sbjct: 85  VALRRSLGAGPAIFVLNGIPPGAETDAVAANLCAVINSPEQLAAWRSAARRAGRKLPAAV 144

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVD+G +RLG++ ++      +        +  ++SHLACAD+P    N  Q   F  L 
Sbjct: 145 QVDSGMSRLGMAPRDVDRIAADPQAFDGIDIRYVMSHLACADEPEHPANEKQRSVFERLR 204

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +      ASL +SSGI LGP++H+ L RPG +LYG      KS+PM  VV  +A++   R
Sbjct: 205 AMLPKAPASLTNSSGIFLGPSFHYDLARPGAALYGINPTPPKSNPMLPVVRLQAKVAQTR 264

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG          +A  + GYADG+    +                + +G  
Sbjct: 265 SVEKGAGVGYGHSYHAQGPLRLATISFGYADGWQRRAASA-------------AWFEGVR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +P +G+++MD  + DI+   +  +  GD +++ GP   +DD A  +GT  Y++L  +G R
Sbjct: 312 LPFVGRVSMDSIILDISALPAGRLREGDLVELLGPSQSVDDAAGHAGTIGYEILTSLGPR 371

Query: 365 YAKFY 369
           + + Y
Sbjct: 372 FHRRY 376


>gi|313676511|ref|YP_004054507.1| alanine racemase [Marivirga tractuosa DSM 4126]
 gi|312943209|gb|ADR22399.1| alanine racemase [Marivirga tractuosa DSM 4126]
          Length = 821

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 155/370 (41%), Gaps = 19/370 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL  + +N +     L    +T  +VK  AYG    +IA  L    V    V   +E
Sbjct: 462 LEIDLNKITHNLNFYRARLKPGVKTMVMVKAFAYGSSSHEIANWLEFQNVDYLAVAYADE 521

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV LR +  Q  I V+       E +        + S      + S   +        L+
Sbjct: 522 GVILRQHGIQLPIMVMNPDPRSFELLHQYNLEPELYSETIFKDYASYTRNHKSLLKVHLK 581

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRTLI 186
           +DTG +RLG    E         +    +++ I SHLA +D+   +  ++ Q   F+ L 
Sbjct: 582 LDTGMHRLGFEAHEIEQLQLLLRHNPQLKVASIFSHLAASDEAMHNGFSAQQAMSFKKLA 641

Query: 187 SH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                         L +S GI   P+Y F + R GI LYG       S  +Q+V T +  
Sbjct: 642 ESLVDFLGYKPILHLLNSPGISRFPDYQFDMVRLGIGLYGVDPTGIYSGQLQSVSTLKTV 701

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  ++    GE + Y  +     D   A  +IGYADG+    S             GK  
Sbjct: 702 ISQVKHIKKGETIGYARRGVANEDMKTATISIGYADGFNRKFS----------QGIGKVL 751

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G + P++G + MDMTM ++T+    + GD + +FG    + D+A A  T  Y++L  I
Sbjct: 752 INGILAPVIGNVCMDMTMVEVTNI-DCKAGDEVIVFGEGPNISDMASAIDTIPYEILTNI 810

Query: 362 GTRYAKF-YT 370
             R  +  YT
Sbjct: 811 SERVKRVFYT 820


>gi|220924500|ref|YP_002499802.1| alanine racemase [Methylobacterium nodulans ORS 2060]
 gi|254802370|sp|B8IEC7|ALR_METNO RecName: Full=Alanine racemase
 gi|219949107|gb|ACL59499.1| alanine racemase [Methylobacterium nodulans ORS 2060]
          Length = 370

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 127/366 (34%), Positives = 190/366 (51%), Gaps = 15/366 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL IDL AL  NW  + A +  A  AAV+K +AYG G  ++APAL++AG + FFV  + 
Sbjct: 9   ARLTIDLGALAANWRRLAAEAAGAECAAVIKADAYGCGIAQVAPALWDAGCRTFFVAHLS 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           E  + R     A I+VL G  PG           PV+ S  ++  +++   S G   P A
Sbjct: 69  EAERTRAVLSDATIYVLNGFPPGSAPAYRAMGFRPVLGSRSEIAEWAQACRSLGERLPAA 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L VDTG NRLGL+  EA+D           Q +L++SHL  A+ P   + + Q+  F  +
Sbjct: 129 LHVDTGMNRLGLNPAEAIDLA-GDAVLGAFQPTLLMSHLVSAEVPGDAITARQIAEFARV 187

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
              Y  + ASLA+S+GI LG     ++ RPG +LYGG     + +PM+ VV  EA I+ +
Sbjct: 188 RMAYPALPASLANSAGIFLGKAARHEIVRPGYALYGGNPTPERENPMRPVVRLEAAILQL 247

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AGE   Y  +       L+A  ++GYADGYP   SG             +  + G 
Sbjct: 248 REVAAGETAGYNARWTAPGPRLLATLSLGYADGYPRAGSGR-----------AEALVGGV 296

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
             P +G I+MD+ + D+T +    +  G  + + G  + LD+V   +GT  Y++L  +G+
Sbjct: 297 RCPFVGTISMDLVILDVTQAPPEAVRRGAPVVLIGDGLTLDEVGQRAGTIGYEILTNLGS 356

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 357 RYDRHY 362


>gi|322515165|ref|ZP_08068166.1| alanine racemase [Actinobacillus ureae ATCC 25976]
 gi|322118830|gb|EFX91025.1| alanine racemase [Actinobacillus ureae ATCC 25976]
          Length = 374

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/380 (24%), Positives = 163/380 (42%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I  + L++N   +   + + +  A++K NAYG G    A AL +  V  F V  
Sbjct: 2   KPATATISQSVLRHNIELIKTFAPHQKLLAMIKANAYGQGLLPAAGALTDL-VDGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           + E ++++      +I ++ G     +           V+  + QL    ++        
Sbjct: 61  LREALEIQETGYTGKILLVEGFFDREELLKTLSRRFDTVVHCLEQLELLEQVAQEWQQEQ 120

Query: 121 -------------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
                             L++DTG +RLG+  ++   F        L +    +SH + A
Sbjct: 121 QKGFWKRKAKIYFPVNVWLKIDTGMHRLGVHPEQVDMFYQRLQACPLVESISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+P       Q+  F    + Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DEPDCGYTEKQIATFEAATAPYTTHERSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLASSLIAVRTHKAGEPVGYGGAWVSDKDTKLGVVAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G + PI+G+++MDM   D+      +VGD +  +G D+ +++
Sbjct: 299 ---------PEGTPVLVNGRIAPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIEE 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAQHIGVISYELITKLTPRV 369


>gi|306835298|ref|ZP_07468326.1| alanine racemase [Corynebacterium accolens ATCC 49726]
 gi|304568818|gb|EFM44355.1| alanine racemase [Corynebacterium accolens ATCC 49726]
          Length = 365

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 159/372 (42%), Gaps = 22/372 (5%)

Query: 6   FLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L+  IDL A+ +N   +   +  + +   VVK +AYG G E++ P +  AG     V +
Sbjct: 1   MLKTTIDLAAIAHNVRLIKEKIGPDVKLMCVVKADAYGHGAERVVPVMLEAGADSIGVAT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V+LR     + I           +      +   ++S  Q       +   +    
Sbjct: 61  LTEAVQLRRMGVDSPIAAWIWQSDQVLEEALACGIQIAVNSPAQAQKL---VEAEIPAEI 117

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V+TG +R G+   +  +            +  ++SH ACADDP +  N  Q E FR 
Sbjct: 118 YIKVETGMHRSGVDKADWDEVFALLREAPHITVLGLMSHFACADDPDNAHNDAQEEEFRR 177

Query: 185 LI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            +  +H  G+E     LA+S   L  P+ HF+  R GI+ YG      + H ++  +T  
Sbjct: 178 ALDAAHAAGLECPVNHLANSPATLSRPSAHFEQVRVGIACYGLEPIAGRDHGLRPAMTWS 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             +  ++     E  SYG      +   +A    GYADG P    G             +
Sbjct: 238 GNVFGVKPIDKDEATSYGRTWSADKPGFLATVDCGYADGLPRAYQGHL-----------Q 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
             I G + P +G++ MD  + D+ D+   I  GD + IFG   +   ++A A GT NY++
Sbjct: 287 VGIDGRLYPQVGRVCMDQIVVDLGDNPHGIAPGDEVTIFGQGGMSATELADAVGTINYEV 346

Query: 358 LVRIGTRYAKFY 369
           + R   R  + Y
Sbjct: 347 VCRPAGRTEREY 358


>gi|307132473|ref|YP_003884489.1| alanine racemase 1, PLP-binding, biosynthetic [Dickeya dadantii
           3937]
 gi|306530002|gb|ADM99932.1| alanine racemase 1, PLP-binding, biosynthetic [Dickeya dadantii
           3937]
          Length = 358

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/373 (27%), Positives = 164/373 (43%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       ID  AL++N   +  ++  +R  A+VK NAYG G  + A A  +     +
Sbjct: 1   MKT---ATAVIDRQALRHNLQRIRQMAPQSRLIAIVKANAYGHGAVEAARAFSD--ADGY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ + E + LR       I +L G     E  +   + +       +     +      
Sbjct: 56  GVSRLSEALALRAAGITKPILLLEGFFAADELPLLAEHQLETAVHCEEQLAALEQARLPH 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++DTG +RLG+  ++A  F    S    + Q   I+SH   AD+P +     QL
Sbjct: 116 PLTVWMKLDTGMHRLGVLPEKAEAFYARLSACANVVQPVNIMSHFCRADEPQAGTTQHQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VV 236
           + F   +    G   S+A+S GILL P  H    RPGI  YG +               +
Sbjct: 176 DCFDAFVQDKPG-RQSIAASGGILLWPQTHRDQIRPGIIQYGVSPLAQGDASQWQLKPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I +R+  A E V YGG     R + + V AIGY DGYP                
Sbjct: 235 TLTSHLIAVREHHADEPVGYGGTWTSPRATRMGVIAIGYGDGYPR-----------DAKS 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   +I G  VP+ G+++MDM   D+  +   +VGD + ++G  + ++ VA  SG + Y+
Sbjct: 284 GTPVWINGREVPLSGRVSMDMITVDLGPNAQDKVGDEVILWGGPLPVEKVAAHSGISAYE 343

Query: 357 LLVRIGTRYAKFY 369
           L+ R+ +R    Y
Sbjct: 344 LITRLTSRTRLEY 356


>gi|187924455|ref|YP_001896097.1| alanine racemase [Burkholderia phytofirmans PsJN]
 gi|226711029|sp|B2T5L6|ALR_BURPP RecName: Full=Alanine racemase
 gi|187715649|gb|ACD16873.1| alanine racemase [Burkholderia phytofirmans PsJN]
          Length = 356

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 153/367 (41%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  ++ P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPKSKIWAVVKANAYGHGLARVFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG + ++       +   +      +++H + AD         Q++ F 
Sbjct: 120 IQLKMNTGMNRLGYTPEKFRAAWERARAAQGVGQITLMTHFSDADGDRG--VDYQVQAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI +YG +        +   +Q  +T  
Sbjct: 178 RGAQGIAGAR-SLANSAATLWHPATHFDWVRPGIIMYGASPSGVTAAIEGTGLQPAMTLA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G  V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQTLSEGHTVGYGSSFKARGSMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVDGVRTRVVGRVSMDMLTVDLTPVPTANVGSRVELWGTSLPIDDVAQACGTIGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|296158928|ref|ZP_06841756.1| alanine racemase [Burkholderia sp. Ch1-1]
 gi|295890803|gb|EFG70593.1| alanine racemase [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 154/367 (41%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  ++ P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPKSKIWAVVKANAYGHGLARVFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG + ++       +   +      +++H + AD         Q+E F 
Sbjct: 120 IQLKMNTGMNRLGYTPEKFRAAWERARAAQGVGQITLMTHFSDADGDRG--VDYQVEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI +YG +        +   +Q  +T  
Sbjct: 178 RGAQGIAGAR-SLANSAATLWHPATHFDWVRPGIIMYGASPSGVTAAIEGTGLQPAMTFA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G  V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQTLNEGHTVGYGSSFKARGSMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G    I+G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVEGVRTRIVGRVSMDMLTVDLTPIPTANVGSRVELWGNALPIDDVAQACGTIGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|227326007|ref|ZP_03830031.1| alanine racemase [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 360

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 169/373 (45%), Gaps = 21/373 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       I+  AL++N   +  L+  ++  AVVK NAYG G  + A    +     +
Sbjct: 1   MKT---ATAVINRRALRHNLQRIRQLAPGSQVVAVVKANAYGHGMIEAAHTFCD--ADCY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  + E + LR       I +L G     +  +   + +      P+     +  +   
Sbjct: 56  GVARLSEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHCPEQLAALEQATLPQ 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
             P  +++D+G +RLG+  + A  F    +  + + Q   I+SH   AD+P +     QL
Sbjct: 116 PIPVWMKLDSGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVV 236
             F        G + S+A+S GILL P  H    RPGI LYG +   N+       Q  +
Sbjct: 176 ACFDAFTQGKPGAQ-SIAASGGILLWPQSHRDRVRPGIILYGVSPLDNEDAAHFGFQPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I +R+  +GE V YGG     R++ + V A+GY DGYP                
Sbjct: 235 TFTSHLIAVREHNSGEAVGYGGTWTSPRNTRLGVVAVGYGDGYPR-----------CAPA 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G    + G  VP+ G+++MDM   D+      +VGD + ++GP + ++ +A  +G + Y+
Sbjct: 284 GTPVLVNGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGPTLPVERIAAHTGASAYE 343

Query: 357 LLVRIGTRYAKFY 369
           L+ R+  R A  Y
Sbjct: 344 LITRLTQRTALEY 356


>gi|325281902|ref|YP_004254444.1| Alanine racemase [Odoribacter splanchnicus DSM 20712]
 gi|324313711|gb|ADY34264.1| Alanine racemase [Odoribacter splanchnicus DSM 20712]
          Length = 825

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 170/370 (45%), Gaps = 24/370 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAV-VKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++D  A+ +N +   +L       AV VK  +YG G  ++A  L   GV    V   +E
Sbjct: 468 LEVDFDAMVHNLNYFRSLLPRKTMIAVMVKAFSYGSGAGEVASLLQYQGVNYLMVAFADE 527

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV+LR       I V+    P     + + NL P I S+  L  + ++++      +P  
Sbjct: 528 GVELRAAGITIPIGVMNP-EPEAFDHMIEFNLEPEIYSLELLEAFDRVLTKHGIEKYPVH 586

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           L+++TG NR GL  ++          K+   +  + SHLA +D+         Q+ RF  
Sbjct: 587 LKLNTGMNRSGLDPEDLPALLKFFETKRKVIIRSMFSHLAGSDEARHDEYTLFQINRFIE 646

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +           I   + +S+GI     Y F + R GI L+G +       P+  V + +
Sbjct: 647 MTKEVQARFDYPIIRHILNSAGIERFGQYAFDMVRLGIGLHGISAVGA---PLWPVSSFK 703

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I  +R+    + V YG +  L RD+ IAV  +GYADG    LS             G+
Sbjct: 704 TYIAAVRQVKGDQTVGYGRKGVLGRDTRIAVIPVGYADGLDRHLSCGV----------GE 753

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +I G  VPI+G I MD  M DITD+   +VGD ++IFG  I + +++   GT  Y++L 
Sbjct: 754 VWIGGQRVPIVGNICMDACMVDITDT-DAQVGDEVEIFGKHISVTELSDKLGTIPYEILT 812

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 813 SVSLRVKRIY 822


>gi|253578412|ref|ZP_04855684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850730|gb|EES78688.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 381

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 87/385 (22%), Positives = 158/385 (41%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M  +  ++  I L A+++N+  M   ++   +  AV+K +AYG G   +A  + +   + 
Sbjct: 1   MKKDSRVKAVISLDAVEHNFREMRKNIAEETKMIAVIKADAYGHGAVPVAHLIEDYDYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
            F   + EE + LR       I +L  +       +    + P +    +    S     
Sbjct: 61  GFAAATAEEAIHLREAGITKPILILGIVFDEYFPELVRYEIRPAVCEYEEARKLSDEAVL 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    + +DTG  R+G    QE ++           ++  + +H A AD+       
Sbjct: 121 QKKTVHIHIALDTGMTRIGFADAQENVEEIKKISELPNLEIEGMFTHFARADEYDRSPAM 180

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
           VQLER+       +           ++S+GI+  P  +  + R GI++YG          
Sbjct: 181 VQLERYLDFSRRVEEAGVEIPLHHCSNSAGIIRMPEANLNIVRAGITIYGIYPSSEVERD 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V+  ++ +  ++   AG  +SYGG     R   +A   +GYADGY   LS    
Sbjct: 241 IVKLEPVMELKSHVTYVKDVPAGAAISYGGTYVADRKLRVATVPVGYADGYSRQLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D+T+   ++ GD + + G D    I ++
Sbjct: 298 --------KGWVLIHGQKAPILGRVCMDQFMVDVTEIGDVKKGDEVTLIGRDGDEFIGIE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++    G  +Y+    I  R  + Y
Sbjct: 350 EIGDLCGRFSYEFACDISPRVPRVY 374


>gi|165975710|ref|YP_001651303.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|303251626|ref|ZP_07337799.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|303252778|ref|ZP_07338938.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307247237|ref|ZP_07529287.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|307251781|ref|ZP_07533684.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307260709|ref|ZP_07542399.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|307262841|ref|ZP_07544466.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
 gi|165875811|gb|ABY68859.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|302648339|gb|EFL78535.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|302649468|gb|EFL79651.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306856295|gb|EFM88448.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 2 str.
           S1536]
 gi|306860782|gb|EFM92792.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306869630|gb|EFN01417.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 12 str.
           1096]
 gi|306871856|gb|EFN03575.1| Alanine racemase [Actinobacillus pleuropneumoniae serovar 13 str.
           N273]
          Length = 374

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISREALRHNIELIKTFAPQQKLLAMIKANAYGQGLLPAADTLADL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVIS------------SVP 107
           + E ++++      +I ++ G    +E        FDT +                    
Sbjct: 61  LREALEIQETGYTGKILLIEGFFDREELLKTLSRRFDTVIHCQEQLELLEQVAKEWQQEQ 120

Query: 108 QLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
           Q  F+ +           L++DTG +RLG+  ++   F        L +    +SH + A
Sbjct: 121 QKGFWKRKAKIYFPINVWLKIDTGMHRLGVHPEKVDMFYQRLKACPLVESISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+P       Q+  F    S Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DEPDCGYTEKQIAVFEAATSPYPTHERSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLASSLIAVRTHKAGEPVGYGGAWVSDKDTKLGVVAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G +VPI+G+++MDM   D+      +VGD +  +G D+ +++
Sbjct: 299 ---------PEGTPVLVNGRIVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIEE 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAQHIGVISYELITKLTPRV 369


>gi|332535828|ref|ZP_08411559.1| alanine racemase, biosynthetic [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332034780|gb|EGI71319.1| alanine racemase, biosynthetic [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 359

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 171/371 (46%), Gaps = 21/371 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I+LTAL +N   +   + N++  AV+K NAYG G   IA  L       F V  
Sbjct: 2   RLATAEINLTALAHNLAQVKGFAPNSKVMAVLKANAYGHGLVTIAQHL--NNADAFAVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EG+ LR       I +L G        I+   N   +I    QL              
Sbjct: 60  IDEGLALRAGGLTKPIVLLEGFFNKADLPILLANNFQTIIHDEYQLAALE-KAKLDAPIT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKL-GQLSLIISHLACADDPSSHVNSVQLERF 182
             L+V+TG +RLG++ ++   F +             +++H +CADD  +     Q+  F
Sbjct: 119 CWLKVNTGMHRLGIAPEQFEAFYNRLQKTPNAKNSVNLMTHFSCADDVDNAKTVQQITLF 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L++        L++S+GI+  P+ H    RPG+ LYG +     I + H ++ V+   
Sbjct: 179 DNLVNGIDQAH-CLSNSAGIIAWPSGHGDWVRPGLMLYGVSPMANSIGQQHKLKPVMRLT 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            R+I +R   A E V YGG+ K  + + +AV A+GY DGYP                G  
Sbjct: 238 TRVIAVRDVPANEAVGYGGRWKSDKPTKLAVVAMGYGDGYPRHAK-----------EGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
             I      I+G + MDM   DI  +  +I+VGD + ++GP++ ++++AL + T  Y+LL
Sbjct: 287 VIIGEQRYGIVGSVAMDMISVDIGANEHNIKVGDRVTMWGPELPVEEIALCADTIPYELL 346

Query: 359 VRIGTRYAKFY 369
             I  R +  Y
Sbjct: 347 CNITPRVSYEY 357


>gi|332665903|ref|YP_004448691.1| Alanine racemase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334717|gb|AEE51818.1| Alanine racemase [Haliscomenobacter hydrossis DSM 1100]
          Length = 818

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 151/370 (40%), Gaps = 21/370 (5%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            RL+++L+AL +N  +    L    +T  ++K  AYG G  ++A  L    V    V   
Sbjct: 460 ARLEVNLSALAHNLRAYQRCLKPGVKTMVMIKATAYGAGSREVARLLEYLRVDYCCVAYA 519

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +EG +LR     A I VL       E++            V  L   + +    + H   
Sbjct: 520 DEGTELRQAGISAPIMVLNPEAGAFEQMRLQRLEPV----VYSLEQLNNMSQEALPHGVH 575

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFRT 184
           L +D+G +RLG  L E               +  + +HLA ++DP+       Q  RF  
Sbjct: 576 LSIDSGMHRLGFDLHEMEGLLDYLRTHPELHVKSVYTHLAASEDPAHDAFTHEQARRFNQ 635

Query: 185 LISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +    +          +S+GI   P Y   + R GI LYG         P+Q V++ +
Sbjct: 636 AYARITAVLGYHPLQHALNSNGITRFPQYQQDMVRLGIGLYGIDVSNTLPEPLQVVLSFK 695

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A I  I+   AGE + YG + +          ++GYADG                     
Sbjct: 696 ATISQIKTIAAGETIGYGRRAQAHSLMRTGTISVGYADGLRRAAGNGAFS---------- 745

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G   PILG + MDM+M D+T     + GD ++IFG D  + ++A    T  Y++  
Sbjct: 746 VGVRGKRAPILGSVCMDMSMIDLTHIPEAQTGDTVEIFGHDPSVQELAKILATIPYEVFT 805

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 806 GISQRVKRVY 815


>gi|290508880|ref|ZP_06548251.1| alanine racemase [Klebsiella sp. 1_1_55]
 gi|289778274|gb|EFD86271.1| alanine racemase [Klebsiella sp. 1_1_55]
          Length = 356

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AVVK NAYG G  ++  AL  +G   F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSAL--SGADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +             +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLNCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    GE + YGG  + +++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQNLRPGEAIGYGGLYRTSQEQRIGIVACGYADGYPR-----------VAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|157964159|ref|YP_001498983.1| alanine racemase [Rickettsia massiliae MTU5]
 gi|157843935|gb|ABV84436.1| Alanine racemase [Rickettsia massiliae MTU5]
          Length = 377

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 121/371 (32%), Positives = 182/371 (49%), Gaps = 21/371 (5%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV
Sbjct: 22  TMSLCTVEINLSTIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFV 81

Query: 63  TSVEEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            S EEGV LR        I VL G+       + + NL PV++++ Q+  + K  +    
Sbjct: 82  ASSEEGVNLRNALGLDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNR 141

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             P  L  +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL 
Sbjct: 142 LLPCYLHFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLN 201

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RF+  + ++  ++ASLA+S GI LG +YHF L R G +LYG              VT +A
Sbjct: 202 RFKAYLQYFPNVKASLANSGGIFLGQDYHFDLARSGAALYGLNPLTK------NPVTLKA 255

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++       + Y       RDS+IA   +GYADG+    S             G+ 
Sbjct: 256 PIIHLQNLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEV 304

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLL 358
           FI    VPI+G+++MD+   D+TD    E+  G   +I G     D +A   GT  Y++L
Sbjct: 305 FINSRGVPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPDKIASIIGTIGYEVL 364

Query: 359 VRIGTRYAKFY 369
             +G+RY + Y
Sbjct: 365 TNLGSRYKRKY 375


>gi|114569759|ref|YP_756439.1| alanine racemase [Maricaulis maris MCS10]
 gi|114340221|gb|ABI65501.1| alanine racemase [Maricaulis maris MCS10]
          Length = 366

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 128/371 (34%), Positives = 187/371 (50%), Gaps = 19/371 (5%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++   RL IDL A+K N+ ++  L+  A   AVVK N YGLG  ++ PAL +AG + F+
Sbjct: 10  RAHPAPRLIIDLAAIKRNYAALQTLAPTASVGAVVKANGYGLGAAQVVPALADAGCRCFY 69

Query: 62  VTSVEEGVKLRL--YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           V    E  + R       A IFV  G  P +   +   +L PVI+ + Q      L +  
Sbjct: 70  VAHTSEAREAREALAGRPADIFVFNGFWPSELAELRQLSLFPVINDLQQ---LEDLRALA 126

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              P A+  DTG +RLGL   E      +        +  I+SHLAC+DDP   +N  Q 
Sbjct: 127 PDLPCAIHFDTGMSRLGLDAAETEALLADPARIDALDVRQIMSHLACSDDPDHPLNEQQR 186

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +RF  +     GI ASL++S+G LLG  YHF + RPG++L+ G     ++ P + VV  +
Sbjct: 187 QRFERIRHALPGIPASLSNSTGTLLGQAYHFDMLRPGLALFSGMPAPGQASPFEPVVAID 246

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A I+ IR    G+ V YG      R   +A  A GYADG                  GG 
Sbjct: 247 APILQIRTLQPGDTVGYGACWTADRPRRVATVAAGYADGLLRAFGN-----------GGY 295

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           G I    VPILG+++MD+   DI      +  GD ++  GPDI  +++A ++ T +Y+ L
Sbjct: 296 GRIGETQVPILGRVSMDLICVDIDAVEEPVRPGDPVRFLGPDI--ENMADSAATISYEFL 353

Query: 359 VRIGTRYAKFY 369
           VR+G R+ + Y
Sbjct: 354 VRLGIRFDRSY 364


>gi|91784141|ref|YP_559347.1| alanine racemase [Burkholderia xenovorans LB400]
 gi|91688095|gb|ABE31295.1| Alanine racemase [Burkholderia xenovorans LB400]
          Length = 356

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 102/369 (27%), Positives = 154/369 (41%), Gaps = 22/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  ++ P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPKSKIWAVVKANAYGHGLARVFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG + ++       +   +      +++H + AD         Q+E F 
Sbjct: 120 IQLKMNTGMNRLGYTPEKFRAAWERARAAQGVGQITLMTHFSDADGDRG--VDYQVEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI LYG +        +   +Q  +T  
Sbjct: 178 RGAQGIAGAR-SLANSAATLWHPATHFDWVRPGIILYGASPSGVTAAIEGTGLQPAMTFA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G  V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQTLHEGHTVGYGSSFKARGSMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G    I+G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVEGVRTRIVGRVSMDMLTVDLTPIPTANVGSRVELWGNALPIDDVAQACGTIGYELMC 345

Query: 360 RIGTRYAKF 368
            +  R    
Sbjct: 346 AVAPRVPMR 354


>gi|288919701|ref|ZP_06414028.1| alanine racemase [Frankia sp. EUN1f]
 gi|288348890|gb|EFC83140.1| alanine racemase [Frankia sp. EUN1f]
          Length = 379

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/389 (25%), Positives = 162/389 (41%), Gaps = 31/389 (7%)

Query: 1   MHSNEFLRL--KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M  +   R    IDL A++++  ++   + NA T AVVK + YG G    A A  +AG  
Sbjct: 1   MSQSHLPRAYAAIDLDAVRDSVAALVVRARNATTMAVVKADGYGHGMVPCARAALDAGAG 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMS 117
                 +EE + LR     A IF        +       ++    S +       +    
Sbjct: 61  WLGTAFLEEALSLRAAGINAPIFSWLAAPGERLAAGLAADIDLSASATWALAELAAAARQ 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHV 174
            G +    L+VDTG  R G + ++  +    +   +      +  + SH A ADDP    
Sbjct: 121 VGRAARVHLKVDTGLGRAGATAEDWPNLCDTAAALEGEGLLDVVGVWSHFAFADDPGHPT 180

Query: 175 NSVQLERF--RTLISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              Q+ RF     ++   G+      LA+S+  L+ P  HF + RPG+S+YG +      
Sbjct: 181 VQSQIGRFGDAMDVARKAGLNPQIRHLANSAATLITPEAHFDMVRPGVSVYGLSPGPEVG 240

Query: 230 HPM----QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
            P     +  +T  A   L+++   G  VSY  +     ++ +AV  +GYADG P   + 
Sbjct: 241 PPSAFGLRPAMTLRATTALVKRVPEGTGVSYAHRYTTRSETNLAVIPLGYADGIPRAATN 300

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DI 341
                        +  + G    I G + MD  + D+     +  GD + +FGP    + 
Sbjct: 301 T-----------AEVLLGGRRRRIAGTVCMDQFVVDVG-VDPVAAGDDVVLFGPGHHGEP 348

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFYT 370
             DD A   GT NY+++ R+G R  + YT
Sbjct: 349 TSDDWARVLGTINYEIVTRVGARVPRVYT 377


>gi|123444026|ref|YP_001007996.1| alanine racemase [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122090987|emb|CAL13870.1| alanine racemase (biosynthetic) [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 359

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRIAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     ++          +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPILAANCIETAVHSIEQLEALEVAELSAPIHVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  K + Q   I+SH + AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACKNVIQPVNIMSHFSRADEPQVDTTRQQLDCFDTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
           ++   G + S+A+S GILL P  H    RPGI LYG +           ++  +  ++ +
Sbjct: 182 VADKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPMDEPYASHFELKPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWVSERDTRLGVVAIGYGDGYPRSA-----------PSGTPMWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+  + + +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVGIVGRVSMDMISVDLGPNATDKVGDEVLLWGAELPVEKIAACTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|319648697|ref|ZP_08002908.1| alanine racemase [Bacillus sp. BT1B_CT2]
 gi|317389116|gb|EFV69932.1| alanine racemase [Bacillus sp. BT1B_CT2]
          Length = 398

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDLTALK N  +M    G +    AVVK NAYG G  ++A A    G     V 
Sbjct: 17  RKTWAEIDLTALKENVRNMKRHIGEHVHLMAVVKANAYGHGDAQVAKAALAEGASILAVA 76

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSH 122
            ++E + LR    +  I VL  + P    I  +  +I    SV         L       
Sbjct: 77  LLDEALSLRAQGIEEPILVLGAVPPEYASIAAEKRIIVTGYSVGWLKDVLGFLNEAEAPL 136

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            Y L++DTG  RLG  + +E  +    + +      + + +H A AD+  +   ++QL+R
Sbjct: 137 EYHLKIDTGMGRLGCKTEEEIKEMMEMTESSDKLNCTGVFTHFATADEKDTDYFNMQLDR 196

Query: 182 FRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F+ LIS      +    ++S+  L      F   R GI +YG              ++ V
Sbjct: 197 FKELISPLPLDRLMVHSSNSAAGLRFREQLFNAVRFGIGMYGLAPSTEIKDELPFRLREV 256

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    +  ++K   GE VSYG      RD  I    +GYADG+   L            
Sbjct: 257 FSLHTELTHVKKIKKGESVSYGATYTAQRDEWIGTVPVGYADGWLRRL------------ 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
            G +  I G    I G+I MD  M  + +   +  G  + + G      I +D++A    
Sbjct: 305 AGTEVLIDGKRQKIAGRICMDQFMISLAEEYPV--GTKVTLIGKQKDEWISVDEIAQNLQ 362

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I +R  + +
Sbjct: 363 TINYEITCMISSRVPRMF 380


>gi|293394140|ref|ZP_06638440.1| alanine racemase [Serratia odorifera DSM 4582]
 gi|291423118|gb|EFE96347.1| alanine racemase [Serratia odorifera DSM 4582]
          Length = 359

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 169/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +   +  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRQAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +        P  +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPVLVANNIETAVHSIEQLEALEQAELARPVPVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F       + + Q   I+SH + AD+P+S     Q+  F   
Sbjct: 122 KIDTGMHRLGVRPEQAEAFYQRLCACRNVAQPVNIMSHFSRADEPNSDATQQQIACFSAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEARI 242
                G + S+A+S G LL P+ H +  RPGI LYG +    +          +T ++ +
Sbjct: 182 AHGKPG-QRSIAASGGTLLWPDAHNEWVRPGIILYGVSPIEQRHGGQFDLQPAMTLKSCL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V A+GY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEAVGYGGTWVSPRDTRLGVVAMGYGDGYPRSA-----------PTGTPIWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  VPI+G+++MDM   D+    S  VGD + ++G  + ++ +A  +G   Y+L+ ++ 
Sbjct: 290 NGREVPIVGRVSMDMISVDLGPDASDRVGDEVVLWGAPLPVERIAEVTGIGAYELITKLT 349

Query: 363 TRYAKFY 369
            R A  Y
Sbjct: 350 QRVAMEY 356


>gi|294634343|ref|ZP_06712881.1| alanine racemase [Edwardsiella tarda ATCC 23685]
 gi|291092240|gb|EFE24801.1| alanine racemase [Edwardsiella tarda ATCC 23685]
          Length = 363

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 20/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL++N+  + + + ++R  AVVK NAYG G  + A  L+      + V  + E + 
Sbjct: 8   IDRRALRHNFQQIRSFAPHSRLIAVVKANAYGHGLLETANTLHQ--ADCYGVARIGEALM 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       I +L G     +  +   N I       +     +           +++DT
Sbjct: 66  LRSGGIVKPILLLEGFFSASDLPVLVANNIETAVHSEEQLQALEQAQLERPVKVWMKLDT 125

Query: 131 GFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG+  ++A  F         + Q    +SH + AD+P       Q+  F   +   
Sbjct: 126 GMHRLGVRPEQAEAFYQRLCACPNVAQPVNFMSHFSRADEPQCGRTEAQMACFDAFVQGK 185

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV-----VTAEARIIL 244
            G + S+A+S GILL P  H  + RPGI LYG + + + +           +T ++ +I 
Sbjct: 186 PG-DQSIAASGGILLWPQSHRDMVRPGIILYGVSPQADLALAADHYGLQPAMTLQSSLIA 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  AGE V YGG      D+ + V AIGY DGYP +              G    I G
Sbjct: 245 VREHKAGEPVGYGGTWVAECDTRLGVVAIGYGDGYPRSA-----------PSGTPVLING 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             VPI+G+++MDM   D+       VGD + ++GP + ++ VA  +G + Y+L+ ++ +R
Sbjct: 294 REVPIVGRVSMDMISVDLGPQAQDRVGDKVIMWGPGLPVEKVAACTGISAYELITKLTSR 353

Query: 365 YAKFY 369
            A  Y
Sbjct: 354 VAMEY 358


>gi|90407215|ref|ZP_01215402.1| alanine racemase [Psychromonas sp. CNPT3]
 gi|90311638|gb|EAS39736.1| alanine racemase [Psychromonas sp. CNPT3]
          Length = 357

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 171/370 (46%), Gaps = 20/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  I+L AL++N   +   + N++  A++K NAYG G  +IA  L +  +    V  
Sbjct: 2   NITRAIINLKALQHNLKVLKKQAPNSKILAIIKANAYGHGMIEIAKNLTD--IHGLGVAR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             E + LR    +  I +L G    +   ++   +L  VI S  Q+       +      
Sbjct: 60  FNEALVLRHAHIKTPIVLLEGFFAKENLPLLVQHDLQTVIHSEEQVQDL-ISATLDKPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L++D G +RLG    +          +K +     +I H  CAD+  + +   Q++ F
Sbjct: 119 IWLKLDVGMHRLGFHAHQFKKMYQLLKHSKNVKLPINLICHFNCADELDNPITEKQIQLF 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAE 239
           +  I    G+  SLASS+  L  P  H  + RPGI+LYG +   +K      +Q V+T +
Sbjct: 179 KVQIQEDSGLN-SLASSAATLAWPTSHADMIRPGIALYGISPFADKEAEEFSLQPVMTLK 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+I +R+   GE V YG      +D+ + V A+GY DGYP                G  
Sbjct: 238 SRLIAVREHKKGEAVGYGANWVAPQDTKLGVVAVGYGDGYPRMA-----------PEGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +VP++G+++MDM   D+    + +VGD + ++G  +    V+   GT  Y+L+ 
Sbjct: 287 ILVNGRIVPLVGRVSMDMLTVDLGLDCTDKVGDDVTLWGEGLSATRVSKHMGTVAYELIT 346

Query: 360 RIGTRYAKFY 369
           ++  R    Y
Sbjct: 347 KLTARVELQY 356


>gi|163939906|ref|YP_001644790.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|229132940|ref|ZP_04261783.1| Alanine racemase [Bacillus cereus BDRD-ST196]
 gi|163862103|gb|ABY43162.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|228650522|gb|EEL06514.1| Alanine racemase [Bacillus cereus BDRD-ST196]
          Length = 408

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A +   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKSAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E ++LR       I +L        + +   +++  +  V  L                 
Sbjct: 88  EAIELREAGITVPILILGYTPVAAVEDVIQYDVMMTVYRVEDLQGIDEVANHLQKKVRIH 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFFEELKRMRYVEVVGMFTHYSTADEIDKTYTNMQTSLFEKA 207

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++              ++S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTAEELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSREVDHTVASLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T+++ ++VGD +  +G      I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVTNAMPVQVGDEVVFYGKQDEEEIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|229917795|ref|YP_002886441.1| alanine racemase [Exiguobacterium sp. AT1b]
 gi|229469224|gb|ACQ70996.1| alanine racemase [Exiguobacterium sp. AT1b]
          Length = 358

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 24/372 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R++ID  A+ +N   +          AVVK NAYG G  ++A      G     V  
Sbjct: 3   RPSRIEIDRAAIAHNIKELTRRIPQ-DLMAVVKANAYGHGAVEVAKIALENGATMLGVAL 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A I V+    P    +  +  +   + S   L   +  +        
Sbjct: 62  LEEALELRDAGIEAPILVMEAQFPEYAGVAAEQGITLSVFSAEWLREAAPYIE-EKPLAV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VDTG  RLGL  +E L+            +  I +H A AD+  S++   Q ERF  
Sbjct: 121 HIKVDTGMGRLGLRTREQLNAL-LEEATDSFVVEGIYTHFATADELDSNLYYTQQERFER 179

Query: 185 LISHYKGIEASLA----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVT 237
           L+         +     + +  + G +  + L R GI+LYG              +   T
Sbjct: 180 LMDGLHERFRYIHTSNSAGAIRMAGQDVPYNLVRVGIALYGLYPSHEMETFYSFLRPAFT 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +++++ +++  AG+ +SYG     + D  I    +GYADG+    SG            
Sbjct: 240 LKSQLMQVKRLEAGQTISYGATYTTSADEWIGTVPVGYADGWLRKASGF----------- 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
            +  + G   PI+G++ MD  M  +     +  G  + + G ++ +D++A   GT NY++
Sbjct: 289 -EVEVNGIRCPIVGRVCMDRFMIRLPKEFPV--GTDVTLVGGNVAIDELASYLGTINYEI 345

Query: 358 LVRIGTRYAKFY 369
           + +  +R  + Y
Sbjct: 346 VCQFTSRLPRLY 357


>gi|42526605|ref|NP_971703.1| alanine racemase [Treponema denticola ATCC 35405]
 gi|81831436|sp|Q73NQ7|ALR_TREDE RecName: Full=Alanine racemase
 gi|41816798|gb|AAS11584.1| alanine racemase [Treponema denticola ATCC 35405]
          Length = 379

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +  I L  L+ N   +   L+ N +    VK +AYG G  ++A A   AGV    V 
Sbjct: 2   RATKAIIHLDNLQYNIKEIKKRLNKNVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           S++E V+LR     A I  L      +   +   ++ P++     +   ++         
Sbjct: 62  SIQEAVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFINDLNRFAKKLNKKA 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA---DDPSSHVNSVQL 179
              L++DTG  R+G S  EA+         +  +L  + +H A +   D+ +      Q+
Sbjct: 122 WVHLKIDTGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKKQI 181

Query: 180 ERFRTLISHYK--GIEASLASSSGI---LLGPNYHFQLTRPGISLYGG--TDKINKSHPM 232
             F+  I   K  GI   L  ++     L  P   F + RPGI +YG   +  +N    +
Sbjct: 182 SVFKDSIKEIKKAGINPGLIHAANSGSVLQYPEAQFDMVRPGILVYGYAPSPSLNSLIDL 241

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+    +++LI+K      VSY       +++ +A   IGYADG   +LSGL      
Sbjct: 242 KPVMELVTQVVLIKKIEKDTSVSYDRCWTAEKETFVATLPIGYADGLMRSLSGL------ 295

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-------DIKLDD 345
                 K  I     PI+G+I MD  M DI  S  ++  D + IFGP       +    D
Sbjct: 296 ------KVRIGKDFFPIIGRICMDQCMIDIGASPWVQRWDEVCIFGPVSKEHPKNNTAQD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A  +GT  Y+L   I  R  + +
Sbjct: 350 LAKIAGTIPYELTCDINKRVPRIF 373


>gi|227541786|ref|ZP_03971835.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182492|gb|EEI63464.1| alanine racemase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 368

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 155/379 (40%), Gaps = 29/379 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           E   L IDL A+ +N   +   +GNA   AVVK NAY  G + + P L  AG+  F V +
Sbjct: 2   ELTTLTIDLDAIASNAREVQKAAGNADVMAVVKANAYNHGVDLVVPVLEKAGIAGFGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E  ++R  T +  +               +   + + S        +      V+   
Sbjct: 62  IPEARQVREVT-ELPVLAWIWHPEQDLPRQEEHIDLGLASMAQARALAADPTPRTVTLV- 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
              +DTG NR G+  +   +            ++ + +HLACAD+  + +   Q++    
Sbjct: 120 ---IDTGLNRSGVDEENWEELCRFVAGVPHLTVTGLFTHLACADEEDNPLTGEQVDTLTR 176

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVV 236
            ++             +A+S G+L   +  F   RPG+ LYG +               +
Sbjct: 177 ALAVARACGLNPTRNHVANSPGVLTKGDLGFSTVRPGLILYGYSPLREGDTAGYTLRPAM 236

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A + +++K  AGE  SYG       D   A+  +GYADG P  + G           
Sbjct: 237 TWSAHVTIVKKIHAGEGASYGMTWHAPTDRYTAIVPVGYADGLPRRMQG----------- 285

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             +  I G   P +G++ MD  + D+  +   +  GD   +FGP    ++ +D+ A    
Sbjct: 286 KLEVAIGGKRYPQVGRVCMDQIVVDLGPEEPQVHPGDEAFLFGPGDHGEMTVDEWAEHLE 345

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T NY++L     R  + Y+
Sbjct: 346 TINYEVLCSPRGRVQRTYS 364


>gi|89099495|ref|ZP_01172371.1| alanine racemase [Bacillus sp. NRRL B-14911]
 gi|89085881|gb|EAR65006.1| alanine racemase [Bacillus sp. NRRL B-14911]
          Length = 392

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 103/375 (27%), Positives = 160/375 (42%), Gaps = 27/375 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +I+L  +K N  SM  L  G+ +  AVVK N YG G  + A A   AG     V  +
Sbjct: 13  TWAEINLDHIKENVKSMKKLLPGDVKLFAVVKANGYGHGDIQAAGAALEAGADCLAVAFL 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR    +A I VL    P    +    ++   +  V  L      +  G    + 
Sbjct: 73  DEALSLRQRGIEAPILVLGASRPEDAPLAASADITLTVFQVNWLEKALPCL-QGKRLTFH 131

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG  R+G+    E L     +  +   +L  I +H A AD+        QL RFR 
Sbjct: 132 VKLDTGMGRIGVREKDELLAIEKLAGREDAFELQGIYTHFATADELDDSYFREQLGRFRE 191

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTA 238
           ++S    +   +   +S+  L  P   F   R GIS+YG T      H    P++   + 
Sbjct: 192 MLSWLGKVPEMVHTSNSAASLRFPEARFNAVRMGISMYGLTPSPEIEHELPFPLKEAFSL 251

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            ARI+ ++K   G+ VSYG   +   D  I    IGYADG+   L G             
Sbjct: 252 HARIVHVKKLQKGDKVSYGATYEAEGDEWIGTLPIGYADGWIRRLQGQ------------ 299

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
           +  + G  VPI+G+I MD  M  +     +E G    + G      I ++++A    T N
Sbjct: 300 EVLVNGSRVPIVGRICMDQCMIRLP--YGVEPGTAATLIGAQGDSMISVNEIAAKLETIN 357

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   I +R  + Y
Sbjct: 358 YEVTCMISSRVPRVY 372


>gi|197303364|ref|ZP_03168403.1| hypothetical protein RUMLAC_02086 [Ruminococcus lactaris ATCC
           29176]
 gi|197297362|gb|EDY31923.1| hypothetical protein RUMLAC_02086 [Ruminococcus lactaris ATCC
           29176]
          Length = 387

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 153/385 (39%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M     +   IDL A+  N   M    G + +  AV+K + YG G   +A        + 
Sbjct: 1   MKKYSRVCAYIDLDAIAYNMEQMKKRIGEDGKLIAVIKTDGYGHGAVPLAKMFEEMPYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
            + V  + E   LR    +  I VL  + P + + + +  +   + +             
Sbjct: 61  GYAVACMGEAGVLREQGIKKPILVLGCVFPDEYEEMVEKEIRAAVYTEEMARGMSEAAQR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +  + +++DTG  R+G  + +E+             Q   + +H A AD+       
Sbjct: 121 LGKTAYFHIKIDTGMGRIGFPVTEESASSIERISRLPNVQTEAMFTHFAKADELDKSYTL 180

Query: 177 VQLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q E+F  +    +     +      +S+GI+  P+    + R GIS+YG     +    
Sbjct: 181 KQHEKFLWMKELMEERNVPIRYFDCDNSAGIIDFPDLKHDIARAGISIYGMYPSDDVDQN 240

Query: 232 M---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
               +  +   + +  +++   G  +SYGG     +   IA   +GY DGYP +LS    
Sbjct: 241 AVSLRPALRLVSHVSFVKEVGKGTSISYGGTYITEKKMKIATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   I G    ILG++ MD  M D+T+   +   D + + G      I+++
Sbjct: 298 --------KGYVLIHGKKARILGRVCMDQFMVDVTEIPDVAFMDEVILIGRDQEEQIQVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A  SG  NY+ +  +  R  + Y
Sbjct: 350 DLAELSGRFNYEFVCCLSKRIPRVY 374


>gi|85716398|ref|ZP_01047370.1| alanine racemase region protein [Nitrobacter sp. Nb-311A]
 gi|85696755|gb|EAQ34641.1| alanine racemase region protein [Nitrobacter sp. Nb-311A]
          Length = 397

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 181/365 (49%), Gaps = 11/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  A VVK +AYG G   +  AL  AG + FFV +++E 
Sbjct: 31  LTVDLDAIVANWRKLEKAAVPAECAGVVKADAYGCGSRPVVRALSAAGCKTFFVATLDEA 90

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R     A I+VL G            N  PVI  + +L  +       G +   A+ 
Sbjct: 91  RVVRAAASAADIYVLDGFFQNCGDAFATINCRPVIGDINELAEWDVFCRRTGWAGGAAIH 150

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL+  EA              ++L++SHLACA+  +  +N+ Q+  FR +  
Sbjct: 151 IDTGMNRLGLTPDEAQGILPRIEA-GDHGITLVMSHLACAESLNHPLNARQVAAFREIAR 209

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASLA+SSGI LGP Y F L RPG +LYG       ++PMQ VV  +ARI+  R 
Sbjct: 210 LFSGVPASLANSSGIFLGPQYQFDLVRPGAALYGVNPTPEAANPMQPVVELKARIVQTRS 269

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R + +AV + GYADGY       D         G    + G   
Sbjct: 270 IDKGESVGYGATWTARRPTRLAVVSAGYADGYFRAGGSNDGTR------GANIVVAGTRC 323

Query: 308 PILGKITMDMTMFDITDSLS---IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           P+ G+I+MD+   DITD  S   +  G    + G  I +D++A   GT  Y++L  +G R
Sbjct: 324 PVAGRISMDLLAVDITDLPSPGGVRRGHLATLIGEGITVDELAHHFGTIGYEVLTSLGRR 383

Query: 365 YAKFY 369
           Y + Y
Sbjct: 384 YYRIY 388


>gi|301051975|ref|YP_003790186.1| alanine racemase [Bacillus anthracis CI]
 gi|300374144|gb|ADK03048.1| alanine racemase [Bacillus cereus biovar anthracis str. CI]
          Length = 389

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIQLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|86131244|ref|ZP_01049843.1| Alanine racemase [Dokdonia donghaensis MED134]
 gi|85818655|gb|EAQ39815.1| Alanine racemase [Dokdonia donghaensis MED134]
          Length = 366

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 157/371 (42%), Gaps = 21/371 (5%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            RL+IDL AL++N+  M +  S   +  AVVK  AYG   + +A  L    V  F V  V
Sbjct: 4   TRLEIDLRALRHNYAYMRSKVSPGVKVMAVVKAFAYGSDAQVVAQELEKLNVDYFAVAYV 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS--HP 123
           EEGV LR       I VL+   P   + + +  L P I S   L  +S          +P
Sbjct: 64  EEGVALRDAGITTPILVLHP-QPDNFETLLERCLEPNIYSRRMLEMFSAFAKAKKQTAYP 122

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERF 182
             L+ +TG NRLG + ++      N    +  ++  + SHLA ++D         Q+ +F
Sbjct: 123 IHLKFNTGLNRLGFTGEDVPWIVKNVLKSEHLKVKSLFSHLAASEDLDERDFTLHQIAQF 182

Query: 183 RTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             + +             + ++SGI+  PN H+   R GI LYG  +   ++  ++ V  
Sbjct: 183 DEIANEIKTQLGYAPFMHMTNTSGIINYPNAHYDCVRTGIGLYGYGNTPEETANLKPVAR 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I        G+ V Y          + A   IG+ADG                   
Sbjct: 243 LNSVISQKHIINPGDSVGYNRALVAKEKMVTATIPIGHADGISRAYGNGV---------- 292

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
           G   I G   P +G + MDM M ++T+    E GD ++IFG     + ++    + +Y+L
Sbjct: 293 GYVTIAGEKAPFVGNVCMDMIMVNVTNIA-CEEGDDVEIFGTQTGAETLSQQVQSISYEL 351

Query: 358 LVRIGTRYAKF 368
           L  +G R  + 
Sbjct: 352 LTMVGQRVKRV 362


>gi|184154687|ref|YP_001843027.1| alanine racemase [Lactobacillus fermentum IFO 3956]
 gi|227514327|ref|ZP_03944376.1| alanine racemase [Lactobacillus fermentum ATCC 14931]
 gi|226711050|sp|B2GA65|ALR_LACF3 RecName: Full=Alanine racemase
 gi|183226031|dbj|BAG26547.1| alanine racemase [Lactobacillus fermentum IFO 3956]
 gi|227087299|gb|EEI22611.1| alanine racemase [Lactobacillus fermentum ATCC 14931]
 gi|299782815|gb|ADJ40813.1| Alanine racemase [Lactobacillus fermentum CECT 5716]
          Length = 373

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 151/385 (39%), Gaps = 30/385 (7%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S    +  L +DL AL  N       L+  +R  AVVK NAYG G   +A AL  AGV
Sbjct: 1   MVSARLRKTDLVVDLKALGANVQRQREQLAPGSRILAVVKANAYGNGMVPVASALARAGV 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSK 114
           + F V  ++E ++LR    Q  + VL         +     +   + S+         +K
Sbjct: 61  EGFCVALLDEAIELRDSGIQELVLVLGITPVEYAPLAAAQGISLTVGSLEWLKNYQRLAK 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                      L +DTG  R+G +  E              +   I +H A AD+  +  
Sbjct: 121 EEGIKQPLKVHLALDTGMGRIGFTTPEDFKEALQLVAAPCFEFEGIFTHFATADEEDATY 180

Query: 175 NSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYH-FQLTRPGISLYGGTDK---INK 228
              Q  RF   ++        +   +S+  L           R GIS+YG       I +
Sbjct: 181 FERQRARFDDFMAVVTKRPPFVHVANSATGLWHQKSIVANTIRMGISMYGANPSGVGIKE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           S P++ V +       +++  AGE VSYG       D  +A   +GYADGYP  + G   
Sbjct: 241 SFPLEPVTSLVTHATYVKQLKAGESVSYGATYTAKEDEWVATLPVGYADGYPRRMQGF-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        + G    +LG++ MD  M  +     +  G    + G     +I + 
Sbjct: 299 ----------YVLVDGQRCEVLGRVCMDQMMVRLPKEYPV--GTEAVLMGRSLDQEITVT 346

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           DVA  + T NY++L  +G R  + Y
Sbjct: 347 DVAEYAHTINYEILTGMGARLHRRY 371


>gi|255319496|ref|ZP_05360710.1| alanine racemase [Acinetobacter radioresistens SK82]
 gi|262378480|ref|ZP_06071637.1| alanine racemase [Acinetobacter radioresistens SH164]
 gi|255303436|gb|EET82639.1| alanine racemase [Acinetobacter radioresistens SK82]
 gi|262299765|gb|EEY87677.1| alanine racemase [Acinetobacter radioresistens SH164]
          Length = 356

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 23/364 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+  A+  ++VK NAYG G +    AL      +F V  +EE ++
Sbjct: 8   IDSQALQYNLNRVKQLAPTAKIVSMVKANAYGHGIKDCLAAL--NSTDNFGVACLEEALE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           +R    Q  I ++ GI   +E           +   S+        K      +    ++
Sbjct: 66  IRKLGYQQPITLIEGIFSEEEMDSVIQYGLECVIHQSAQLDWLKARKEEYITKNLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E ++  ++   +    +  +    A AD     +N  Q  +F  +  
Sbjct: 126 LNSGMNRLGFKVPEIIEIINSLKAEGFSCVLAMHFANADAD---HPLNEQQKTQFLQVKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIIL 244
               + AS  +S+ I   P  +F   RPGI LYG +   +KS     ++ V+T +A II 
Sbjct: 183 ACDPVLASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKSAHELDLKPVMTFDAAIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           + +   GE V YG     ++D  IA+ +IGY DGYP                     I  
Sbjct: 243 LNQIQTGEAVGYGSTFVASQDMQIAIVSIGYGDGYPRAF-----------IKPNYVMINN 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+++MDM   D++   ++ +G  ++++G    +D+VA A+GT  Y+LL R+  R
Sbjct: 292 KPAPVIGRVSMDMIAVDVSGL-TVTLGTQVELWGKQRLVDEVAEANGTIGYELLCRLSNR 350

Query: 365 YAKF 368
             + 
Sbjct: 351 PKRI 354


>gi|300857828|ref|YP_003782811.1| alanine racemase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685282|gb|ADK28204.1| Alanine racemase [Corynebacterium pseudotuberculosis FRC41]
 gi|302330118|gb|ADL20312.1| Alanine racemase [Corynebacterium pseudotuberculosis 1002]
          Length = 370

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 156/376 (41%), Gaps = 22/376 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             L  +IDL A+ +N   +   +    A+   VVK + Y  G  ++A  +   G   F V
Sbjct: 2   NLLEARIDLAAIAHNTRLIKDKAAAQGAQLMCVVKADGYNHGAVEVATVMEENGADQFGV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            ++ E + LR    ++ I                  +     S+  +     +       
Sbjct: 62  ATIGEALALREGGIESSILSWIWSPEQDLGAAITAEIDLAAISLEHVKALVRASESYGKK 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                ++VDTG +R G+  Q+  +      + +  Q++ + SH + AD+  S     Q  
Sbjct: 122 PVRVTVKVDTGLHRSGVDKQDWRESFCMLRDAENIQVTGVFSHFSSADESDSTETEQQER 181

Query: 181 RFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F   I   + +        +A+S   L  P+ +F + RPG++LYG      +SH ++  
Sbjct: 182 AFLNAIELGRSLGLELPVNHIANSPATLNRPDLYFDMVRPGLALYGHEPIPGESHGLREA 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++   R+ +++    GE  SYG   +  +D  + V  +GYADG P +  G          
Sbjct: 242 MSWVGRVTVVKPIARGEGTSYGLTWRAEQDGYLCVVPVGYADGLPRSAQGHL-------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTT 353
              +  I G   P +G++ MD  +  + ++   +  GD   I GP  +   ++A A GT 
Sbjct: 294 ---EITIGGRRYPQVGRVCMDQIVVALGENPYGVAQGDEAVILGPTGMTATELATAMGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+L+ R   R  + +
Sbjct: 351 NYELVCRPCGRTVRVF 366


>gi|190149523|ref|YP_001968048.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|189914654|gb|ACE60906.1| alanine racemase [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
          Length = 374

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 97/380 (25%), Positives = 165/380 (43%), Gaps = 31/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     I   AL++N   +   +   +  A++K NAYG G    A  L +  V+ F V  
Sbjct: 2   KPATATISREALRHNIELIKTFTPQQKLLAMIKANAYGQGLLPAADTLADL-VEGFGVAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVIS------------SVP 107
           + E ++++      +I ++ G    +E        FDT +                    
Sbjct: 61  LREALEIQETGYTGKILLIEGFFDREELLKTLSRRFDTVIHCQEQLELLEQVAKEWQQEQ 120

Query: 108 QLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
           Q  F+ +           L++DTG +RLG+  ++   F        L +    +SH + A
Sbjct: 121 QKGFWKRKAKIYFPINVWLKIDTGMHRLGVHPEKVDMFYQRLKACPLVESISFVSHFSRA 180

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
           D+P       Q+  F    S Y   E S+++SSGIL     H+   RPGI ++G +    
Sbjct: 181 DEPDCGYTEKQIAVFEAATSPYPTHERSISASSGILYWKQAHYDWVRPGIIMHGISPHYT 240

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  + V+T  + +I +R   AGE V YGG     +D+ + V A+GY DGYP     
Sbjct: 241 PITDLGFKPVMTLASSLIAVRTHKAGEPVGYGGAWVSDKDTKLGVVAMGYGDGYPRNA-- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G +VPI+G+++MDM   D+      +VGD +  +G D+ +++
Sbjct: 299 ---------PEGTPVLVNGRIVPIVGRVSMDMLTVDLGADSQDKVGDEVIFWGKDLLIEE 349

Query: 346 VALASGTTNYDLLVRIGTRY 365
           VA   G  +Y+L+ ++  R 
Sbjct: 350 VAQHIGVISYELITKLTPRV 369


>gi|307729311|ref|YP_003906535.1| alanine racemase [Burkholderia sp. CCGE1003]
 gi|307583846|gb|ADN57244.1| alanine racemase [Burkholderia sp. CCGE1003]
          Length = 356

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 154/367 (41%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  +  P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPKSKIWAVVKANAYGHGLARAFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + ++       +   +      +++H + AD       + Q+E F 
Sbjct: 120 IQLKMNSGMNRLGYTPEKFRAAWERARACQGVGQITLMTHFSDADSERG--VAHQMEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI +YG +        +   +Q  +T  
Sbjct: 178 RGAQGIAGAR-SLANSAATLWHPQSHFDWVRPGIIMYGASPSGVSAAIEGTGLQPAMTLA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G+ V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQSVPEGQTVGYGSLFKARAPMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVDGVRTRIVGRVSMDMLTVDLTPVPTANVGSRVELWGTSLPIDDVARACGTIGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|291614600|ref|YP_003524757.1| alanine racemase [Sideroxydans lithotrophicus ES-1]
 gi|291584712|gb|ADE12370.1| alanine racemase [Sideroxydans lithotrophicus ES-1]
          Length = 353

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 179/370 (48%), Gaps = 22/370 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  ++  IDL+AL+NN       + ++R  AV+K NAYG G  ++A AL     + F + 
Sbjct: 2   SRPIQAHIDLSALQNNLRVARR-TASSRIMAVIKANAYGHGLLRVAEALNE--AEGFALL 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            V + + LR    +  I +L G    +E  ++ +  L  VI S  QL           S 
Sbjct: 59  DVRDAIALREAGFRQTILLLEGFFDAEELPLLAEYELGSVIHSTRQLAMLDACPRRN-SL 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+++TG NRLG + ++              +   +++H + AD+P     + QLE F
Sbjct: 118 EVWLKINTGMNRLGFAPEQVPAAMEKLRKHPAVRDITLMTHFSHADEPEG--VAEQLELF 175

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAE 239
           + L + Y+ +  SLA+S+ +L  P+ H +  RPGI LYG +   + S     ++ V+T  
Sbjct: 176 KGLTAAYR-LPRSLANSAALLRYPSTHSEWVRPGIMLYGASPFADASAQQLGLRPVMTLT 234

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +R+  AG+ V Y G  +  +   I   A GYADGYP                G  
Sbjct: 235 SEIISVRELKAGDRVGYAGLFRADKTMRIGTVACGYADGYPRHA-----------PTGTP 283

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     LG+++MDM   D+++    ++G  + ++G  + +++VA ++GT +Y+L+ 
Sbjct: 284 IQVNGQRTRTLGRVSMDMLSVDLSEIPDADIGSPVTLWGTGLSVEEVAKSAGTISYELMC 343

Query: 360 RIGTRYAKFY 369
            +  R    Y
Sbjct: 344 ALTARVPVKY 353


>gi|150025143|ref|YP_001295969.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771684|emb|CAL43158.1| Bifunctional enzyme : Mur ligase domain proteinand alanine racemase
           [Flavobacterium psychrophilum JIP02/86]
          Length = 817

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 161/370 (43%), Gaps = 21/370 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L A+ +N +     L+   +   +VK   YG G  +IA  L +  V    V   +E
Sbjct: 457 LEINLNAISHNLNYFKSKLNPKTKIMVMVKAFGYGSGSFEIAKLLAHHKVNYLGVAFADE 516

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G++LR    Q  I VL          I   NL P I S+  L  + K+       S+P  
Sbjct: 517 GIELRQAGIQLPIMVLNPEMTS-FPSIIQYNLEPEIYSIRGLKAFIKITQQKELTSYPIH 575

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           ++++TG NRLG   Q   +            +  I+SHLA +DD         Q+  F T
Sbjct: 576 IKINTGMNRLGFDAQIIPELISILQKHDSVLVKSILSHLAASDDLAQDIFTRKQISDFDT 635

Query: 185 LISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +             ++++S I   P   F + R GI LYG ++  N++  ++ V T +
Sbjct: 636 ISNKITTKLKINPIRHISNTSAISNYPQAQFDMVRLGIGLYGVSNDANETKKLENVGTLK 695

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  IR   +G+ V Y  +  + + + IA   IGYADG                   G 
Sbjct: 696 SIISQIRNLNSGQSVGYNRRFMVKKPTTIATIPIGYADGISRAWGNEV----------GY 745

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             +     PI+G I MDM M D+T   +   G+ + IFG    +  +A A+ T  Y++L 
Sbjct: 746 VLVNEQKAPIVGSICMDMLMIDVTKI-NCSEGNQVIIFGKTPSVTTIAKATKTIPYEILT 804

Query: 360 RIGTRYAKFY 369
            I +R  + +
Sbjct: 805 SISSRVKRVF 814


>gi|170696497|ref|ZP_02887622.1| alanine racemase [Burkholderia graminis C4D1M]
 gi|170138600|gb|EDT06803.1| alanine racemase [Burkholderia graminis C4D1M]
          Length = 356

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 154/367 (41%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  +  P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPKSKIWAVVKANAYGHGLARAFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + ++       +   +      +++H + AD       + Q+E F 
Sbjct: 120 IQLKMNSGMNRLGYTPEKFRAAWERARACQGVGQITLMTHFSDADSERG--VAHQMEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI LYG +        +   +Q  +T  
Sbjct: 178 RGAQGIAGAR-SLANSAATLWHPQSHFDWVRPGIILYGASPSGVSAAIQGTGLQPAMTLA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G+ V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQNIAEGQTVGYGSLFKARGPMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVDGVRTRIVGRVSMDMLTVDLTPVPTANVGSRVELWGASLPIDDVARACGTIGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|253689861|ref|YP_003019051.1| alanine racemase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
 gi|259710071|sp|C6DE79|ALR_PECCP RecName: Full=Alanine racemase
 gi|251756439|gb|ACT14515.1| alanine racemase [Pectobacterium carotovorum subsp. carotovorum
           PC1]
          Length = 360

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 172/374 (45%), Gaps = 23/374 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       I+  AL++N   +  L+ +++  A+VK NAYG G  + A    +     +
Sbjct: 1   MKT---ATAVINRRALRHNLQRIRQLAPDSQVVAIVKANAYGHGMIEAAHTFCD--ADCY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  + E + LR       I +L G     +  ++ +  L   + S  QL    +  +  
Sbjct: 56  GVARLSEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSPEQLAALEQ-ATLS 114

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 +++DTG +RLG+  + A  F    +  + + Q   I+SH + AD+P +     Q
Sbjct: 115 QPLRVWMKLDTGMHRLGVLPEHADAFWQRLTACRNVVQPVNIMSHFSRADEPEAGTTERQ 174

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
           L  F        G + S+A+S GILL P  H    RPGI LYG +   N+       Q  
Sbjct: 175 LTCFDAFTQGKPGAQ-SIAASGGILLWPQSHRDRVRPGIILYGVSPLDNEDAAHFGFQPA 233

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  + +I +R+   GE V YGG     R++ + V A+GY DGYP               
Sbjct: 234 MTFTSHLIAVREHHTGEAVGYGGTWTSPRNTRLGVVAVGYGDGYPR-----------CAP 282

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    I G  VP+ G+++MDM   D+      +VGD + ++GP + ++ +A  +G + Y
Sbjct: 283 AGTPVLINGREVPLSGRVSMDMITVDLGPDAQDKVGDEVILWGPTLPVERIAAHTGASAY 342

Query: 356 DLLVRIGTRYAKFY 369
           +L+ R+  R A  Y
Sbjct: 343 ELITRLTQRTALEY 356


>gi|163119246|ref|YP_077790.2| D-alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|145902752|gb|AAU22152.2| D-alanine racemase [Bacillus licheniformis ATCC 14580]
          Length = 389

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDLTALK N  +M    G + R  AVVK NAYG G  ++A A    G     V 
Sbjct: 8   RKTWAEIDLTALKENVRNMKRHIGEHVRLMAVVKANAYGHGDAQVAKAALAEGASILAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSH 122
            ++E + LR    +  I VL  +      I  +  +I    SV         L       
Sbjct: 68  LLDEALSLRAQGIEEPILVLGAVPTEYASIAAEKRIIVTGYSVGWLKDVLGFLNEAEAPL 127

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            Y L++DTG  RLG  + +E  +    + +      + + +H A AD+  +   ++QL+R
Sbjct: 128 EYHLKIDTGMGRLGCKTEEEIKEMMEMTESNDKLNCTGVFTHFATADEKDTDYFNMQLDR 187

Query: 182 FRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F+ LIS      +    ++S+  L      F   R GI +YG              ++ V
Sbjct: 188 FKELISPLPLDRLMVHSSNSAAGLRFREQLFNAVRFGIGMYGLAPSTEIKDELPFRLREV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    +  ++K   GE VSYG      RD  I    +GYADG+   L            
Sbjct: 248 FSLHTELTHVKKIKKGESVSYGATYTAQRDEWIGTVPVGYADGWLRRL------------ 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
            G +  I G    I G+I MD  M  + +   +  G  + + G      I +D++A    
Sbjct: 296 AGTEVLIDGKRQKIAGRICMDQFMISLAEEYPV--GTKVTLIGKQKDEWISVDEIAQNLQ 353

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I +R  + +
Sbjct: 354 TINYEITCMISSRVPRMF 371


>gi|167586833|ref|ZP_02379221.1| alanine racemase [Burkholderia ubonensis Bu]
          Length = 356

 Score =  276 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  +  P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRYAGQSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + QL  F  
Sbjct: 121 QLKMNSGMNRLGYTPEKYRAAWERARACHGIGQITLMTHFSDADSERG--VAEQLAAFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              H  G   SLA+S+ +L  P  HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAEHIAGAR-SLANSAAVLWHPGTHFDWVRPGIMLYGASPSGRFADIADTGLKPTMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQSIGYGSTFSAQAQMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G ++ +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGSRVELWGNELPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|322418170|ref|YP_004197393.1| alanine racemase [Geobacter sp. M18]
 gi|320124557|gb|ADW12117.1| alanine racemase [Geobacter sp. M18]
          Length = 379

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 107/389 (27%), Positives = 177/389 (45%), Gaps = 32/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S     ++IDL AL++N+  +           AVVK +AYG G + ++  L   GV  
Sbjct: 1   MDS-RPTVVEIDLAALRHNFGLVQKKVPQGCGILAVVKADAYGHGFQYVSEELEKLGVDA 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV---PQLTFYSKLM 116
           F V  + EGV+LR+      + +L G++PG+E+     N+   + S+     L   +  +
Sbjct: 60  FAVAFLAEGVQLRMSGIYRPVLILGGVYPGEERRCIGLNISTALYSLEQAAALDQAALEI 119

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--- 173
            C       L+VDTG  RLG++  +  +F       K  ++  I SH A AD+       
Sbjct: 120 KCYRKAKVHLKVDTGMGRLGVTWDKVPEFLAELRQFKNLEMEGIFSHFASADELDPDGLA 179

Query: 174 VNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
              +Q ERF   +       ++     +A+S+ IL        L RPGI LYG     + 
Sbjct: 180 FTKLQAERFNAAVVEARRQGFEPRYVHVANSAAILAADLPFCNLVRPGIILYGAAPSGDF 239

Query: 229 S--HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           S  +    V+  ++R+ +++    G  +SYG +      +LIA   +GYADGY  +L+  
Sbjct: 240 SDENSALPVMKLKSRVAMLKWVEPGTTISYGRRYVARERALIASVPVGYADGYCRSLTN- 298

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----I 341
                      G+  I+G    + G + MD  M D+TD   + VGD + + G D     I
Sbjct: 299 ----------KGEALIRGERARVAGTVCMDWIMLDVTDIEGVAVGDEVTLLGADPMGDRI 348

Query: 342 KLDDVALASGTTNYDLLVRIG-TRYAKFY 369
             +++A  +GT  Y+++  I   R  + Y
Sbjct: 349 SAEELAEKAGTIAYEIMCGISTRRVRRVY 377


>gi|197286571|ref|YP_002152443.1| alanine racemase [Proteus mirabilis HI4320]
 gi|227357646|ref|ZP_03841999.1| alanine racemase (biosynthetic) [Proteus mirabilis ATCC 29906]
 gi|194684058|emb|CAR45397.1| alanine racemase (biosynthetic) [Proteus mirabilis HI4320]
 gi|227162356|gb|EEI47360.1| alanine racemase (biosynthetic) [Proteus mirabilis ATCC 29906]
          Length = 363

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 110/370 (29%), Positives = 175/370 (47%), Gaps = 21/370 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N+  +   + ++   AVVK NAYG G  + A  L +     F V  + 
Sbjct: 4   ATAVIDRRALRHNFQHVRDYAPHSHLIAVVKANAYGHGLLETAYTLMD-DADCFGVARIG 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G        I+   ++  V+ S  QL                
Sbjct: 63  EALTLRSGGIVKPILLLEGFFDAVDLPILVVNHIETVVHSEEQLEALEN-ADLEEPVKVW 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFR 183
           +++DTG +RLG+  +EA  F       K + Q   ++SH + AD+P    V   Q++ F+
Sbjct: 122 MKLDTGMHRLGVRPEEAEAFYQRLCACKNVQQPVNLVSHFSRADEPDIPEVTQNQIQLFQ 181

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAE 239
             I    G + S+A+S+GIL  P  H+Q  RPGI  YG +     +  K   +   +T +
Sbjct: 182 AFIQDKAG-DKSIAASAGILFWPQVHYQWVRPGIITYGISPTGDNRTGKDFGLTPAMTLK 240

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             +I +RK  AGE V YGG     +D+ + V AIGY DGYP +              G  
Sbjct: 241 TSLIAVRKHKAGEPVGYGGTWVSEKDTYLGVIAIGYGDGYPRSA-----------PSGTP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +I G  VPI+G+++MDM   D+   L   VGD   ++G  + ++++A  SG + Y+L+ 
Sbjct: 290 VWINGRKVPIVGRVSMDMISVDLGSELIDRVGDEAILWGDVLPVEEIAKYSGISAYELIT 349

Query: 360 RIGTRYAKFY 369
           ++ +R    Y
Sbjct: 350 KLTSRVIMEY 359


>gi|288934755|ref|YP_003438814.1| alanine racemase [Klebsiella variicola At-22]
 gi|288889464|gb|ADC57782.1| alanine racemase [Klebsiella variicola At-22]
          Length = 356

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AVVK NAYG G  ++  AL  +G   F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSAL--SGADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +             +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    GE + YGG  + +++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQNLRPGEAIGYGGLYRTSQEQRIGIVACGYADGYPR-----------VAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|157828002|ref|YP_001494244.1| alanine racemase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165932698|ref|YP_001649487.1| alanine racemase [Rickettsia rickettsii str. Iowa]
 gi|166969428|sp|A8GQR1|ALR_RICRS RecName: Full=Alanine racemase
 gi|189027390|sp|B0BW55|ALR_RICRO RecName: Full=Alanine racemase
 gi|157800483|gb|ABV75736.1| alanine racemase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165907785|gb|ABY72081.1| alanine racemase [Rickettsia rickettsii str. Iowa]
          Length = 355

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+L+ +KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV S EEG
Sbjct: 6   VEINLSTIKNNYLLLQDVCKTSLVGAAVKANGYGLGAIQISKALIEENCRHFFVASSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V LR        I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 66  VNLRNALGLDINILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGLS  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGINRLGLSSDEIEQLINDRDLLKGLDLQYIISHLAISEEIDNPYNLEQLNRFKAYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            ++  ++ASLA+S GI LG +YHF L RPG +LYG              VT +A II ++
Sbjct: 186 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPLTK------NPVTLKAPIIHLQ 239

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                  + Y       RDS+IA   +GYADG+    S             G+ FI    
Sbjct: 240 NLTLDSHIGYNMTFTTKRDSVIATLPLGYADGFSRNFSNQ-----------GEVFINSRS 288

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VPI+G+++MD+   D+TD    E+  G   +I G     + +A   GT  Y++L  +G+R
Sbjct: 289 VPIVGRVSMDLINIDVTDLPPSEIFLGQEAEIIGNYCTPNKIASIIGTIGYEVLTNLGSR 348

Query: 365 YAKFY 369
           Y + Y
Sbjct: 349 YKRKY 353


>gi|311068669|ref|YP_003973592.1| alanine racemase [Bacillus atrophaeus 1942]
 gi|310869186|gb|ADP32661.1| alanine racemase [Bacillus atrophaeus 1942]
          Length = 393

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/384 (25%), Positives = 171/384 (44%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++       ++  AVVK NAYG G  ++A      G  +  V 
Sbjct: 6   REVWIEVNLDAIKKNLRAIRHHIPKKSKIMAVVKANAYGHGSVEVARHALENGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           SVEEG+ LR     A I VL        K     N+      V  +   ++++       
Sbjct: 66  SVEEGIVLRKAGITAPILVLGFTSLSCVKESAAWNIELSAFQVDWIKEANEILKNEARPN 125

Query: 124 Y---ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+   +E L   +     K  + + I +H + AD+P + +  +Q 
Sbjct: 126 RLGIHINVDTGMGRLGVRTKEELLAVVNALTASKFLRWAGIFTHFSTADEPDTTLTKLQH 185

Query: 180 ERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           ++F   +     +GIE     +++++  +  P +   + R GI LYG             
Sbjct: 186 DKFIRFLRFLKNQGIELPTVHMSNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLHLV 245

Query: 231 PMQTVVTAEARIILIRKAL-AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            ++  ++ +ARI  ++        +SYG       D +IA   +GYADGY   LS     
Sbjct: 246 KLEPALSLKARIAYVKTMRTEPRTISYGATYIAEPDEVIATLPVGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP++G++TMD+ M  + +S   + G+ + I+G     +I +D+
Sbjct: 303 --------GFVLHRGRRVPVVGRVTMDLIMVSLGESEG-KQGEEVVIYGQQKGAEISVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY+++  +  R  +FY
Sbjct: 354 VAEMLNTINYEVVSTLSRRIPRFY 377


>gi|154686685|ref|YP_001421846.1| YncD [Bacillus amyloliquefaciens FZB42]
 gi|154352536|gb|ABS74615.1| YncD [Bacillus amyloliquefaciens FZB42]
          Length = 393

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/384 (25%), Positives = 165/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + +++DL A+K N  ++     N  +  AVVK NAYG G  ++A     +G  +  V 
Sbjct: 6   REVWIEVDLDAIKKNVRAIRRHIPNTSKIMAVVKANAYGHGSVEVARQALESGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG---V 120
           SVEEG+ LR     A I VL        K     N+      V  +   ++++       
Sbjct: 66  SVEEGIVLRRAGITAPILVLGFTALSCVKKSAVWNITLSAFQVSWIKKANRILEKEADSK 125

Query: 121 SHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+  +E  L       +        I +H + AD+P + +  +Q 
Sbjct: 126 RLSIHINVDTGMGRLGVRTEEDLLAVVKALKSSTYLSWDGIFTHFSTADEPDTELTMLQH 185

Query: 180 ERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----H 230
           E+F + +   K  +       + +++  +  P +   + R GI LYG     +       
Sbjct: 186 EKFISFLRFLKNQDITLPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSASIKELNLV 245

Query: 231 PMQTVVTAEARIILIR-KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            +   ++ +ARI  ++        VSYG         +IA   IGY DGY   LS     
Sbjct: 246 DLTPALSLKARIAYVKAMVTDPRTVSYGATYIAEPGEIIATIPIGYGDGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + ++   + G+ + I+G     +I +D+
Sbjct: 303 --------GFILHRGRRVPVAGRVTMDMIMVSLGENEG-KQGEEVVIYGKQQGAEISVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT +Y++L  +  R  +FY
Sbjct: 354 IAEMLGTISYEVLSVLSRRVPRFY 377


>gi|325263860|ref|ZP_08130593.1| alanine racemase [Clostridium sp. D5]
 gi|324030898|gb|EGB92180.1| alanine racemase [Clostridium sp. D5]
          Length = 387

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 91/385 (23%), Positives = 154/385 (40%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M     +  ++DL A+  N   M    G  A+  AV+K + YG G   IA        + 
Sbjct: 1   MKQFNRVYARVDLDAIAYNMEQMKQRIGEGAQIIAVIKMDGYGHGAVPIAEMFEENNYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            +   S+EE + LR    +  I VL  I P Q + +   ++   +         SK  + 
Sbjct: 61  GYATASLEEAIALRKEGIKKPILVLGCIFPEQYEEMILNDIRATVYMKETAEGISKAAAA 120

Query: 119 -GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      ++VDTG  RLG     +++       +    +L  + +H A AD+       
Sbjct: 121 LGRKVRIHIKVDTGMGRLGFLPDTDSVKAIREISSLPNIELEGMFTHFAKADETDKSYTY 180

Query: 177 VQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q E+F  +    +            +S+GI+  P+    L R GIS YG         K
Sbjct: 181 KQHEKFVWMKDALEAEGADITYYHCDNSAGIIDFPDMKHNLVRAGISTYGMYPSDEVSQK 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++  +   + +  +++  AG  +SYGG     +   +A   +GY DGY   LS    
Sbjct: 241 AVDLKPALELISHVTFVKEVEAGTSISYGGTFTAPKRMKVATIPVGYGDGYSRGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        I+G    ILG++ MD  M D+TD   +   D   + G      I ++
Sbjct: 298 --------KADVLIRGRRARILGRVCMDQFMVDVTDIPDVRFMDQAVLIGFDGEEHIPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           +++   G  NY+ +  +G R  + Y
Sbjct: 350 ELSGLCGRFNYEFVCCLGKRIPRVY 374


>gi|42779353|ref|NP_976600.1| alanine racemase [Bacillus cereus ATCC 10987]
 gi|42735268|gb|AAS39208.1| alanine racemase [Bacillus cereus ATCC 10987]
          Length = 389

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +           AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSGVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|319764875|ref|YP_004128812.1| alanine racemase [Alicycliphilus denitrificans BC]
 gi|330827080|ref|YP_004390383.1| alanine racemase [Alicycliphilus denitrificans K601]
 gi|317119436|gb|ADV01925.1| alanine racemase [Alicycliphilus denitrificans BC]
 gi|329312452|gb|AEB86867.1| alanine racemase [Alicycliphilus denitrificans K601]
          Length = 358

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 163/369 (44%), Gaps = 18/369 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R   DL AL+ N+    A+ G  + AA +K NAYG G  + A AL       F V 
Sbjct: 2   SRPARADFDLAALRANYAHAKAVHGG-KVAATLKANAYGHGAVECARAL-AGQADAFAVA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYS--KLMSCGV 120
             +E ++LR       I VL G     +  +   + +  V+    QL      +    G 
Sbjct: 60  FAQEAMELREAGLTEPILVLEGAFGMDDVALAQRHGLWLVVHQEEQLRMLESLQDRGGGA 119

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++DTG +R G++  +A                 +++HLA AD+P + +   QL 
Sbjct: 120 GVHAWLKIDTGMHRAGVAPGQARALWQRLAACDKVAGITLMTHLASADEPGNPMTGRQLA 179

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            F        G   S+A+S+G+L     H    RPGI LYG   +   S  +Q V+   +
Sbjct: 180 VFADATQGLPG-PRSIANSAGVLGWKGAHQDWARPGIMLYGADPRGMPSDVLQPVMRLAS 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + + R    GE + YGG     R + + + A+GYADGYP             V  G   
Sbjct: 239 EVFVERWLAPGEALGYGGSFVADRPTRVGLVAMGYADGYPR-----------VVPSGTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  I+G++ MDM   D+TD      G  ++++G  + ++ VA A+GT  Y+LL  
Sbjct: 288 AVDGRLTRIIGRVAMDMLTVDLTDLPGAGPGAQVELWGSQVSVNQVAAAAGTIAYELLCN 347

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 348 V-KRVRRVY 355


>gi|260663736|ref|ZP_05864624.1| alanine racemase [Lactobacillus fermentum 28-3-CHN]
 gi|260551787|gb|EEX24903.1| alanine racemase [Lactobacillus fermentum 28-3-CHN]
          Length = 373

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 151/385 (39%), Gaps = 30/385 (7%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S    +  L +DL AL  N       L+  +R  AVVK NAYG G   +A AL  AGV
Sbjct: 1   MVSARLRKTDLVVDLKALGANVQRQREQLAPGSRILAVVKANAYGNGMVPVASALARAGV 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSK 114
           + F V  ++E ++LR    Q  + VL         +     +   + S+         +K
Sbjct: 61  EGFCVALLDEAIELRDSGIQELVLVLGITPVEYAPLAAAQGISLTVGSLEWLKNYQRLAK 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                      L +DTG  R+G +  E              +   I +H A AD+  +  
Sbjct: 121 EEGIKHPLKVHLALDTGMGRIGFTTPEDFKEALQLVAAPCFEFEGIFTHFATADEEDATY 180

Query: 175 NSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYH-FQLTRPGISLYGGTDK---INK 228
              Q  RF   ++        +   +S+  L           R GIS+YG       I +
Sbjct: 181 FERQRARFDDFMAVVTKRPPFVHVANSATGLWHQKSIVANTIRMGISMYGANPSGVGIKE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           S P++ V +       +++  AGE VSYG       D  +A   +GYADGYP  + G   
Sbjct: 241 SFPLEPVTSLVTHATYVKQLKAGESVSYGATYTAKEDEWVATLPVGYADGYPRRMQGF-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        + G    +LG++ MD  M  +     +  G    + G     +I + 
Sbjct: 299 ----------YVLVDGQRCEVLGRVCMDQMMVRLPKEYPV--GTEAVLMGRSLDQEITVT 346

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           DVA  + T NY++L  +G R  + Y
Sbjct: 347 DVAEYAHTINYEILTGMGARLHRRY 371


>gi|206580802|ref|YP_002237825.1| alanine racemase [Klebsiella pneumoniae 342]
 gi|206569860|gb|ACI11636.1| alanine racemase [Klebsiella pneumoniae 342]
          Length = 356

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AVVK NAYG G  ++  AL  +G   F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSAL--SGADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +             +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    GE + YGG  + +++  I + A GYADGYP                G   
Sbjct: 238 EVIGVQNLRPGEAIGYGGLYRTSQEQRIGIVACGYADGYPR-----------VAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|310659416|ref|YP_003937137.1| alanine racemase [Clostridium sticklandii DSM 519]
 gi|308826194|emb|CBH22232.1| Alanine racemase [Clostridium sticklandii]
          Length = 384

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 168/381 (44%), Gaps = 26/381 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H+      +I+L  +K N++++  L     +  AV+K NAYG G  + A  L   G   F
Sbjct: 3   HTFRPTWAEINLDHVKANYNNIRKLLKPETKFCAVIKANAYGHGAVQYAKVLDKEGADYF 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V   EE ++LR  +    I  L  +   + K +   N+   I S  +    S++     
Sbjct: 63  AVAVCEEALELRQNSITKPIMCLGYVPEDRFKDMMQNNVDITIYSYEKAALLSQIAKDNN 122

Query: 120 VSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           ++    +++D+G +RLGL    EA+D        +  ++  I +H A ADD        Q
Sbjct: 123 LNAKIHIKLDSGMSRLGLQCDNEAVDEILKISTLENLEIVGIFTHFALADDKDLSYTHEQ 182

Query: 179 LERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--- 230
            + +  +++  +          + +S+  ++ P YH  + RPGI LYG     +      
Sbjct: 183 YKNYSFVVNELETKGLKIPIKHVCNSAATMMLPEYHLDMVRPGIILYGHYPSDDVDKSKV 242

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +   +  ++ +  ++K   G  +SYG + +   + +IA   IGYADG+   LSG     
Sbjct: 243 KLYPAMALKSTVAHVKKLEEGRGISYGHKYRSKENEIIATIPIGYADGFTRMLSGQAD-- 300

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVAL 348
                      +   MVP++G+I MD  M  +      +VGD I IF  +  + ++  A 
Sbjct: 301 ---------VKLNDKMVPVVGRICMDQCMLSL--EEEAKVGDQITIFSDEEGMDIERFAQ 349

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+LL  +  R  + Y
Sbjct: 350 RLGTINYELLCMVQRRVPRIY 370


>gi|52144988|ref|YP_081841.1| alanine racemase [Bacillus cereus E33L]
 gi|51978457|gb|AAU20007.1| alanine racemase [Bacillus cereus E33L]
          Length = 389

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|49479127|ref|YP_034579.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|118476000|ref|YP_893151.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|196036026|ref|ZP_03103427.1| alanine racemase [Bacillus cereus W]
 gi|196041155|ref|ZP_03108451.1| alanine racemase [Bacillus cereus NVH0597-99]
 gi|196046235|ref|ZP_03113462.1| alanine racemase [Bacillus cereus 03BB108]
 gi|218901445|ref|YP_002449279.1| alanine racemase [Bacillus cereus AH820]
 gi|225862294|ref|YP_002747672.1| alanine racemase [Bacillus cereus 03BB102]
 gi|228912983|ref|ZP_04076626.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228925498|ref|ZP_04088591.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228931744|ref|ZP_04094645.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228944050|ref|ZP_04106433.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229119908|ref|ZP_04249166.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|229182639|ref|ZP_04309884.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|49330683|gb|AAT61329.1| alanine racemase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|118415225|gb|ABK83644.1| alanine racemase [Bacillus thuringiensis str. Al Hakam]
 gi|195991395|gb|EDX55362.1| alanine racemase [Bacillus cereus W]
 gi|196022980|gb|EDX61660.1| alanine racemase [Bacillus cereus 03BB108]
 gi|196028090|gb|EDX66701.1| alanine racemase [Bacillus cereus NVH0597-99]
 gi|218535948|gb|ACK88346.1| alanine racemase [Bacillus cereus AH820]
 gi|225790248|gb|ACO30465.1| alanine racemase [Bacillus cereus 03BB102]
 gi|228600834|gb|EEK58409.1| Alanine racemase [Bacillus cereus BGSC 6E1]
 gi|228663546|gb|EEL19128.1| Alanine racemase [Bacillus cereus 95/8201]
 gi|228815624|gb|EEM61862.1| Alanine racemase [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228827924|gb|EEM73657.1| Alanine racemase [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228834160|gb|EEM79704.1| Alanine racemase [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228846658|gb|EEM91667.1| Alanine racemase [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
          Length = 389

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|308068000|ref|YP_003869605.1| alanine racemase 1 [Paenibacillus polymyxa E681]
 gi|305857279|gb|ADM69067.1| Alanine racemase 1 [Paenibacillus polymyxa E681]
          Length = 398

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 99/391 (25%), Positives = 165/391 (42%), Gaps = 32/391 (8%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAV-VKDNAYGLGCEKIAPALYNAGVQ 58
           M +     R +I+L  L  N+ +        +   V VK NAYG G  +I+  L   G  
Sbjct: 1   MQAQYRSTRAEINLDHLGANYEAFRKALPADKLILVCVKANAYGHGAVEISKELERLGAD 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
              V  ++E ++LR    Q  I VL    P   +  ++ ++   + S   L    +L   
Sbjct: 61  YLSVAFLDEALELRHAGVQLPILVLGYTSPDAVQTAWEHDISLTVFSEEVLESIRRLDRQ 120

Query: 119 G--VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           G        +++D+G  RLGL   +EA+ F   +   +   L  + +H A AD+      
Sbjct: 121 GSERKLKVHIKIDSGMGRLGLLPGEEAMAFVRQANELEQVLLEGMYTHFARADEEDKSYT 180

Query: 176 SVQLERFR--TLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
            +Q +RFR        +GI   +    +S+  +  P+    + R GIS+YG       + 
Sbjct: 181 LLQYDRFRGVAQALREQGITIPIIHTGNSAATIDTPSLSPNMVRIGISIYGLYPSDEVNR 240

Query: 231 PMQ---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
                  V++ +  ++  +    G  VSYG +   + +  I    IGYADGY   LSG  
Sbjct: 241 QAIELLPVLSLKTAVVYTKTLPPGWGVSYGTRYVTSSEERIGTLPIGYADGYSRMLSGKI 300

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGPD--- 340
                      +  I+G  VP+LG I MD  M  +     D+  I+ G+ + + G     
Sbjct: 301 -----------EVLIRGRRVPVLGTICMDQCMVSLQSFAEDAEEIQTGEEVVLIGQQSGE 349

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
            I  D++A   GT +Y+++  I  R  + YT
Sbjct: 350 TIAADELASKLGTIHYEVICMIADRVPRVYT 380


>gi|52784371|ref|YP_090200.1| hypothetical protein BLi00551 [Bacillus licheniformis ATCC 14580]
 gi|52346873|gb|AAU39507.1| Alr [Bacillus licheniformis ATCC 14580]
          Length = 390

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 155/378 (41%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDLTALK N  +M    G + R  AVVK NAYG G  ++A A    G     V 
Sbjct: 9   RKTWAEIDLTALKENVRNMKRHIGEHVRLMAVVKANAYGHGDAQVAKAALAEGASILAVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSH 122
            ++E + LR    +  I VL  +      I  +  +I    SV         L       
Sbjct: 69  LLDEALSLRAQGIEEPILVLGAVPTEYASIAAEKRIIVTGYSVGWLKDVLGFLNEAEAPL 128

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            Y L++DTG  RLG  + +E  +    + +      + + +H A AD+  +   ++QL+R
Sbjct: 129 EYHLKIDTGMGRLGCKTEEEIKEMMEMTESNDKLNCTGVFTHFATADEKDTDYFNMQLDR 188

Query: 182 FRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F+ LIS      +    ++S+  L      F   R GI +YG              ++ V
Sbjct: 189 FKELISPLPLDRLMVHSSNSAAGLRFREQLFNAVRFGIGMYGLAPSTEIKDELPFRLREV 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    +  ++K   GE VSYG      RD  I    +GYADG+   L            
Sbjct: 249 FSLHTELTHVKKIKKGESVSYGATYTAQRDEWIGTVPVGYADGWLRRL------------ 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
            G +  I G    I G+I MD  M  + +   +  G  + + G      I +D++A    
Sbjct: 297 AGTEVLIDGKRQKIAGRICMDQFMISLAEEYPV--GTKVTLIGKQKDEWISVDEIAQNLQ 354

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I +R  + +
Sbjct: 355 TINYEITCMISSRVPRMF 372


>gi|257083766|ref|ZP_05578127.1| alanine racemase [Enterococcus faecalis Fly1]
 gi|256991796|gb|EEU79098.1| alanine racemase [Enterococcus faecalis Fly1]
          Length = 371

 Score =  275 bits (704), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVETAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVQFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|325473141|gb|EGC76337.1| alanine racemase [Treponema denticola F0402]
          Length = 379

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 162/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +  I L  L+ N   +   L+ N +    VK +AYG G  ++A A   AGV    V 
Sbjct: 2   RATKAIIHLDNLQYNIKEIKKRLNKNVKICLPVKADAYGHGAVRVAVAAIRAGVSYLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           S++E V+LR     A I  L      +   +   ++ P++     +   ++         
Sbjct: 62  SIQEAVELREAGIVAPIISLSLPVLEEIPELLKYDIEPLVIDEEFINDLNRFAKKLNKKA 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA---DDPSSHVNSVQL 179
              L++DTG  R+G S  EA+         +  +L  + +H A +   D+ +      Q+
Sbjct: 122 GVHLKIDTGMRRIGCSPMEAVKLAVQIDRAENLELKGVCTHFAVSDSTDEKNIKFTKKQI 181

Query: 180 ERFRTLISHYK--GIEASLASSSGI---LLGPNYHFQLTRPGISLYGG--TDKINKSHPM 232
             F+  I   K  GI   L  ++     L  P   F + RPGI +YG   +  +N    +
Sbjct: 182 SVFKDSIKEIKKAGINPGLIHAANSGAVLQYPEAQFDMVRPGILVYGYAPSPSLNSLIDL 241

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+    +++LI+K      VSY       +++ +A   IGYADG   +LSGL      
Sbjct: 242 KPVMELVTQVVLIKKIEKDTSVSYDRCWTAEKETFVATLPIGYADGLMRSLSGL------ 295

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-------DIKLDD 345
                 K  I     PI+G+I MD  M DI  S  ++  D + IFGP       +    D
Sbjct: 296 ------KVRIGKDFFPIIGRICMDQCMIDIGASPWVQRWDEVCIFGPVSKEHPKNNTAQD 349

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A  +GT  Y+L   I  R  + +
Sbjct: 350 LAKIAGTIPYELTCDINKRVPRIF 373


>gi|167897553|ref|ZP_02484955.1| alanine racemase [Burkholderia pseudomallei 7894]
 gi|167922125|ref|ZP_02509216.1| alanine racemase [Burkholderia pseudomallei BCC215]
          Length = 374

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHCDEQLKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|328554160|gb|AEB24652.1| alanine racemase [Bacillus amyloliquefaciens TA208]
          Length = 393

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/384 (25%), Positives = 164/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + +++DL A+K N  ++     N ++  AVVK NAYG G  ++A     +G  +  V 
Sbjct: 6   REVWIEVDLDAIKKNIRAIRRHIPNKSKIMAVVKANAYGHGSVEVARQALESGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG---V 120
           SVEEG+ LR     A I VL        K     N+      V  +   ++++       
Sbjct: 66  SVEEGIVLRRAGITAPILVLDFTALSCVKKSAVWNITLSAFQVSWIKKANQILEEEAVSK 125

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+  + + L       +        I +H + AD+P + +  +Q 
Sbjct: 126 RLSIHINVDTGMGRLGVRTEKDLLAVVKALKSSTYLSWDGIFTHFSTADEPDTELTMLQH 185

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----H 230
           E+F + +              + +++  +  P +   + R GI LYG             
Sbjct: 186 EKFISFLRFLKDQGITLPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKELDLV 245

Query: 231 PMQTVVTAEARIILIR-KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            +   ++ +ARI  ++        VSYG         +IA   IGYADGY   LS     
Sbjct: 246 KLTPALSLKARIAYVKAMVTEPRTVSYGATYIAEPGEIIATIPIGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + +S   + G+ + I+G     +I +D+
Sbjct: 303 --------GFILYRGRRVPVAGRVTMDMIMVSLGESEG-KQGEEVVIYGKQKGAEISVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  +  R  +FY
Sbjct: 354 IAEMLGTINYEVVSTLSRRVPRFY 377


>gi|170751205|ref|YP_001757465.1| alanine racemase [Methylobacterium radiotolerans JCM 2831]
 gi|170657727|gb|ACB26782.1| alanine racemase [Methylobacterium radiotolerans JCM 2831]
          Length = 377

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 141/365 (38%), Positives = 197/365 (53%), Gaps = 16/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + A +G A  AAVVK +AYGLG +++AP L  AG + FFV  V EG
Sbjct: 22  LTIDLAALAENYRLLAARAGTATCAAVVKADAYGLGADRVAPVLAAAGCRHFFVAQVGEG 81

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           V LR +  P A I VL G  PG E    D +L+PV++ + QL  +           P  L
Sbjct: 82  VALRSILGPGAVIAVLNGAAPGSEATCADHDLVPVLNDLSQLDGWQGLARRRARRLPAIL 141

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           QVDTG  R G +  E               L L++SHLACA +P S VN+ QL  FR + 
Sbjct: 142 QVDTGMARFGFAPDEVGALLDRPDALAGLDLRLVMSHLACAGEPDSPVNAAQLSVFRAVR 201

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                + ASLA+SSGI LGP++HF L RPG +LYG   +    +PM+ V+   AR++  R
Sbjct: 202 RRLPAVPASLAASSGIFLGPDFHFDLVRPGAALYGIAPQEGAPNPMRPVIGLRARVMQTR 261

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YG    + RDS +A  AIGYADG+  +              GG  +  G  
Sbjct: 262 SVPAGTPVGYGHAATVARDSRLATVAIGYADGFFRS------------TAGGAAWFGGVR 309

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +P++G+++MD  + D+TD+    +  G  + I GP+  +D  A A+GT  Y++L  +G R
Sbjct: 310 LPVVGRVSMDSLVLDVTDAAPGTLGPGALVDIVGPERDVDAAAAAAGTIGYEVLTNLGHR 369

Query: 365 YAKFY 369
           + + Y
Sbjct: 370 FHRVY 374


>gi|224025718|ref|ZP_03644084.1| hypothetical protein BACCOPRO_02459 [Bacteroides coprophilus DSM
           18228]
 gi|224018954|gb|EEF76952.1| hypothetical protein BACCOPRO_02459 [Bacteroides coprophilus DSM
           18228]
          Length = 821

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL  N +     L    +   +VK +AYG G  ++A  L +  V    V   +E
Sbjct: 463 LEINLNALTANLNYYRNKLKPETKMVCMVKASAYGAGSFEVAKTLEDQRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           G  LR       I ++        K +FD  L P + S   L     +       + P  
Sbjct: 523 GADLRKAGIHCPIIIMDPEVSA-FKTMFDYKLEPEVYSFQMLEELIKAAEREGAANVPVH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           ++VDTG +RLG +  +          +       I SHL  +D D        Q+E F  
Sbjct: 582 IKVDTGMHRLGFAPSDMPRLAERLHRQSTVIPRSIFSHLVGSDSDRFDPFTRRQIETFEA 641

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +         I   + +++GI   P   F + R G+ LYG     N+      V T +
Sbjct: 642 AAADLQKEFNHKIIRHICNTAGIERYPGAQFDMVRLGLGLYGIDPYTNRIL--HNVTTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I    A E V Y  +  L+RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHDVPADETVGYSRKGVLSRDSRIATLPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGKKAPYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSDVLETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSGRVKRIY 818


>gi|306834227|ref|ZP_07467347.1| alanine racemase [Streptococcus bovis ATCC 700338]
 gi|304423800|gb|EFM26946.1| alanine racemase [Streptococcus bovis ATCC 700338]
          Length = 368

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 171/382 (44%), Gaps = 27/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   +  IDL  +  N  ++ A    + +  AVVK NAYG G   +A A+++  V
Sbjct: 1   MISSLHRPTKAVIDLDVICQNIDAVKANIPQDKKAFAVVKANAYGHGATNVAHAIHHL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  I P +  +  D ++   ++S   L   ++   
Sbjct: 60  DGFCVSNIDEALELREAGIEETILILGVIMPDEVALARDYHVTLTVASQEWLDLANEQGI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+   +  +    +  K    ++ I +H A AD+      + 
Sbjct: 120 SLAGLDVHLKVDSGMGRIGVRSLDEAENVIANLKKAGANVAGIFTHFATADEADDTKFNE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QLE F  L+ +     A +   +S+  +      F L R GI +YG      +++  +P+
Sbjct: 180 QLEFFTNLVDNLSDKPAIVHASNSATSIWHSETIFNLVRLGIVMYGLNPSGTELDLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++   AG  V YG      ++  IA   IGYADG+   L G       
Sbjct: 240 KPALSLESSLVHVKTIPAGATVGYGATYTAQKEEYIATVPIGYADGWTRDLQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     + + L   +G  + + G +    I   D+A 
Sbjct: 295 -------VLVNGEFCEIVGRVSMDQITIRLPEKLP--IGTKVTLIGQESDKVISATDLAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
             GT NY++L  +  R  + Y+
Sbjct: 346 KRGTINYEVLCLLSDRIPRVYS 367


>gi|227520095|ref|ZP_03950144.1| alanine racemase [Enterococcus faecalis TX0104]
 gi|227072439|gb|EEI10402.1| alanine racemase [Enterococcus faecalis TX0104]
          Length = 371

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVETAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPQYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTESEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|312898652|ref|ZP_07758042.1| alanine racemase [Megasphaera micronuciformis F0359]
 gi|310620571|gb|EFQ04141.1| alanine racemase [Megasphaera micronuciformis F0359]
          Length = 403

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 150/382 (39%), Gaps = 26/382 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +   +  +IDL     N   +  ++G  R   AVVK +AYG G   ++      G     
Sbjct: 17  TKRPVWAEIDLDRAAENMREIRRITGKDRLVTAVVKADAYGHGAVMLSKVFLQNGADRLA 76

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
           V+S++EG +LR     A I +L      + + + D ++ P + S      +S+     G 
Sbjct: 77  VSSLDEGTELRRAKITAPILILGHTAGERAEELLDNDIEPAVFSYRDAEMFSRKAVETGR 136

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +  DTG  R+G     EA++            +  I +H + AD         Q 
Sbjct: 137 EVKIHIAADTGMCRIGYVPSPEAIEEVKKIAALPGITMQGIFTHFSEADIADKEWAHEQH 196

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
            RF   I   KG           +S+G L  P++H ++ RPGI  YG             
Sbjct: 197 SRFSAFIDALKGAGVTFNIHHCCNSAGTLELPDFHREMIRPGIIQYGYDASKEVLVTGTK 256

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V++    I  ++    G+ V YG        + IA   IGYADGY   LS       
Sbjct: 257 IKPVMSLRCCITHLKTIYEGDCVGYGRHFTAKGPTKIATLPIGYADGYNRALSSKID--- 313

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     + G     +G I MD  M D++    ++VGD + +FG      +  D++A
Sbjct: 314 --------VIVHGVRAHQVGNICMDQCMIDVSHIPDVKVGDEVVLFGEQGSECVSADEIA 365

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T  +++   I  R  + Y
Sbjct: 366 DTCHTIIHEITCNINRRVPRVY 387


>gi|308174216|ref|YP_003920921.1| alanine racemase [Bacillus amyloliquefaciens DSM 7]
 gi|307607080|emb|CBI43451.1| alanine racemase [Bacillus amyloliquefaciens DSM 7]
 gi|328912552|gb|AEB64148.1| alanine racemase [Bacillus amyloliquefaciens LL3]
          Length = 393

 Score =  275 bits (703), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 97/384 (25%), Positives = 164/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + +++DL A+K N  ++     N ++  AVVK NAYG G  ++A     +G  +  V 
Sbjct: 6   REVWIEVDLDAIKKNIRAIRRHIPNKSKIMAVVKANAYGHGSVEVARQALESGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG---V 120
           SVEEG+ LR     A I VL        K     N+      V  +   ++++       
Sbjct: 66  SVEEGIVLRRAGITAPILVLGFTALSCVKKSAVWNITLSAFQVSWIKKANQILEEEAVSK 125

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+  + + L       +        I +H + AD+P + +  +Q 
Sbjct: 126 RLSIHINVDTGMGRLGVRTEKDLLAVVKALKSSTYLSWDGIFTHFSTADEPDTELTMLQH 185

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----H 230
           E+F + +              + +++  +  P +   + R GI LYG             
Sbjct: 186 EKFISFLRFLKDQGITLPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKELDLV 245

Query: 231 PMQTVVTAEARIILIR-KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            +   ++ +ARI  ++        VSYG         +IA   IGYADGY   LS     
Sbjct: 246 KLTPALSLKARIAYVKAMVTEPRTVSYGATYIAEPGEIIATIPIGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + +S   + G+ + I+G     +I +D+
Sbjct: 303 --------GFILYRGRRVPVAGRVTMDMIMVSLGESEG-KQGEEVVIYGKQKGAEISVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  +  R  +FY
Sbjct: 354 IAEMLGTINYEVVSTLSRRVPRFY 377


>gi|251795108|ref|YP_003009839.1| alanine racemase [Paenibacillus sp. JDR-2]
 gi|247542734|gb|ACS99752.1| alanine racemase [Paenibacillus sp. JDR-2]
          Length = 394

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 93/385 (24%), Positives = 162/385 (42%), Gaps = 32/385 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R++I L AL  N H+        R   A VK NAYG G  +IA      GV    V 
Sbjct: 6   RPTRVEISLDALNRNLHAFRGAMPEGRLLMASVKANAYGHGAVEIAREAERFGVDYLGVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP---VISSVPQLTFYSKLMSCGV 120
            ++E ++LR       I VL G  P     I     I        + +        + G 
Sbjct: 66  FLDEALQLRHAGIATPILVL-GFVPADALAIARDKDITIALFREDILEAAAALPAQADGK 124

Query: 121 SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++D+G  RLG+    EA+ F   + +    ++  + +H A AD+        Q 
Sbjct: 125 KLKAHIKIDSGMGRLGIIGKDEAIAFIRKALDVPQLEIEGMFTHYAKADETDKSYTRQQY 184

Query: 180 ERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           ERF  +  + +  +  +      +S+  +  P Y   + R GIS+YG         +   
Sbjct: 185 ERFHAVAEYVRSNKLPIRILHAANSAAGIDTPEYGGDMVRLGISMYGLYPSDEVSRERIK 244

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V++ ++ +++++K   G  +SYG +    ++  I    IGYADG+   LSG      
Sbjct: 245 LEPVLSLKSEVVMVKKTPPGWGISYGTRYVTKQEECIGTLPIGYADGFSRMLSG------ 298

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDI---TDSLSIEVGDYIQIF----GPDIKLD 344
                     ++G  VP+ G I MD  M  +   +   ++E G+ + +     G +I  +
Sbjct: 299 -----KAHVLVRGVKVPVRGTICMDQCMIALDPASADAAVEPGEEVVLIGRQGGEEISAE 353

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++AL  GT NY++   +  R  + Y
Sbjct: 354 ELALQLGTINYEVTCMLAARVPRVY 378


>gi|254247864|ref|ZP_04941185.1| Alanine racemase [Burkholderia cenocepacia PC184]
 gi|124872640|gb|EAY64356.1| Alanine racemase [Burkholderia cenocepacia PC184]
          Length = 356

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 149/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  +  P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAESIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|291522358|emb|CBK80651.1| alanine racemase [Coprococcus catus GD/7]
          Length = 392

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 101/389 (25%), Positives = 167/389 (42%), Gaps = 31/389 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +      +I+L ALK+N   + A+ G+ +   V+K NAYG G   +A  L   G   F
Sbjct: 1   MKNTYRACAEINLDALKHNIQEIQAVLGDTKLMCVIKTNAYGHGSIVLARELAAMGAYGF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V +V+EG++LR       I VL  +   Q   +   +++P I +      +  + +   
Sbjct: 61  AVATVDEGIELRNNGIIQPILVLGFVAKEQYADMITHHIMPAIFTYSMAKDFDAVANAMH 120

Query: 121 S-HPYALQVDTGFNRLGLSLQE------ALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           +     +++DTG +R+G                  +   K  ++  I +H ACAD    H
Sbjct: 121 TVADVHIKLDTGMSRIGFKSDAESIEATVQGIVMINSLLKNIRIDGIFTHFACADCEDDH 180

Query: 174 VNSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
           +   QL+RF  +I               A+S+ I+  P     + R GI +YG       
Sbjct: 181 MTFKQLKRFDNVIDRLEKNGVHIPIKHCANSAAIIKYPGMRMNMARAGIIIYGLYPSDEV 240

Query: 229 S---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                 ++ V+  ++ +I ++    G  V YG      R + IA  +IGY DGYP  LS 
Sbjct: 241 DREVIKLEPVMRLKSHVIYVKTVEPGTTVGYGATYVCQRPTKIATVSIGYGDGYPRALSN 300

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPD---- 340
                       G+  I     PI+G+I MD  M D+TD    I+ GD + + G      
Sbjct: 301 -----------KGRVLIGSQSWPIIGRICMDQLMVDVTDADYEIKQGDEVVLVGSQGSES 349

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           I +++VA  + + NY+ +  I  R  + Y
Sbjct: 350 IPVEEVAAINNSFNYEFVCDINRRVPRVY 378


>gi|302205563|gb|ADL09905.1| alanine racemase [Corynebacterium pseudotuberculosis C231]
 gi|308275798|gb|ADO25697.1| Alanine racemase [Corynebacterium pseudotuberculosis I19]
          Length = 370

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 22/376 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             L  +IDL A+ +N   +   +    A+   VVK + Y  G  ++A  +   G   F V
Sbjct: 2   NLLEARIDLAAIAHNTRLIKDKAAAQGAQLMCVVKADGYNHGAVEVATVMEENGADQFGV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            ++ EG+ LR    ++ I                  +     S+  +     +       
Sbjct: 62  ATIGEGLALREGGIESSILSWIWSPEQDLGAAITAEIDLAAISLEHVKALVRASESYGKK 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                ++VDTG +R G+  Q+  +      + +  Q++ + SH + AD+  S     Q  
Sbjct: 122 PVRVTVKVDTGLHRSGVDKQDWRESFCMLRDAENIQVTGVFSHFSSADESDSTETEQQER 181

Query: 181 RFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F   I   + +        +A+S   L  P+ +F + RPG++LYG      +SH ++  
Sbjct: 182 AFLNAIELGRSLGLELPVNHIANSPATLNRPDLYFDMVRPGLALYGHEPIPGESHGLREA 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++   R+ +++    GE  SYG   +  +D  + V  +GYADG P +  G          
Sbjct: 242 MSWVGRVTVVKPIARGEGTSYGLTWRAEQDGYLCVVPVGYADGLPRSAQGHL-------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTT 353
              +  I G   P +G++ MD  +  + ++   +  GD   I GP  +   ++A A GT 
Sbjct: 294 ---EITIGGRRYPQVGRVCMDQIVVALGENPYGVAQGDEAVILGPTGMTATELATAMGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+L+ R   R  + +
Sbjct: 351 NYELVCRPCGRTVRVF 366


>gi|324324251|gb|ADY19511.1| alanine racemase [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 389

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 90/387 (23%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +           AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSGVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPLKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CKVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|256390195|ref|YP_003111759.1| alanine racemase [Catenulispora acidiphila DSM 44928]
 gi|256356421|gb|ACU69918.1| alanine racemase [Catenulispora acidiphila DSM 44928]
          Length = 397

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 99/389 (25%), Positives = 156/389 (40%), Gaps = 36/389 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNAR------TAAVVKDNAYGLGCEKIAPALYNAGVQD 59
               +IDL A+++N   +  +             AVVK +AYG G    A A    G   
Sbjct: 16  RAEARIDLDAIRSNTRRLGQIVAETGSKSAAGVMAVVKADAYGHGAVPCARAAKQGGAAW 75

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
                 EE ++LR       I        G    +    +     +   L    +    C
Sbjct: 76  LGTALPEEALQLRAAGLTGPILAWLHPAGGPWDELIVHEIDVTAYAPWVLEEITAAAQRC 135

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVN 175
           G+     L+VDTG  R G    + L+    +   +         + SH ACAD+P     
Sbjct: 136 GIQARVQLKVDTGLGRGGTQPHDWLELVELAAKAEAAGHIRVTGVWSHFACADEPGHPSI 195

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             QL+ F   ++             +A+S   L  P  HF L R G+++YG +   +   
Sbjct: 196 RAQLDVFALALAAADHAGLRPEVRHIANSPAALSLPEAHFDLVRAGLAVYGLSPLPDTTP 255

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++  +T  AR+ L++ A A   VSYG        + +A+  +GYADG P   S + 
Sbjct: 256 ADFGLRPAMTLTARVALVKNAPAEHGVSYGHIHHTAGPTTLALVPLGYADGLPRNSSNV- 314

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD---SLSIEVGDYIQIFGP----D 340
                     G+  + G    + G++ MD  + D+ D      + VGD + IFGP    +
Sbjct: 315 ----------GEVLVGGARHRVAGRMAMDQFVVDLGDPDAVHDVHVGDEVVIFGPGDRGE 364

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              DD A A+GT NY+++ RIG R  + Y
Sbjct: 365 PTADDWAQATGTLNYEIVTRIGPRVPRVY 393


>gi|229089375|ref|ZP_04220650.1| Alanine racemase [Bacillus cereus Rock3-42]
 gi|228693956|gb|EEL47644.1| Alanine racemase [Bacillus cereus Rock3-42]
          Length = 389

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGLSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|183599314|ref|ZP_02960807.1| hypothetical protein PROSTU_02779 [Providencia stuartii ATCC 25827]
 gi|188021549|gb|EDU59589.1| hypothetical protein PROSTU_02779 [Providencia stuartii ATCC 25827]
          Length = 356

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 83/369 (22%), Positives = 152/369 (41%), Gaps = 21/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L    +N   +    G+A+  +V+K +AYG   + +  AL  +    F +  
Sbjct: 3   RPISAVIHLQNFTHNLSVVRQHVGHAKIWSVMKADAYGHSIKHVWKALAAS--DGFAILD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    +  I +L G     +  + D   +             +          
Sbjct: 61  LNEAILLREQGWKGPILLLEGFFQPDDLKVIDQYQLTTAVHSYWQLDAIENRHFQNPISV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +++++G NRLG    E     H     +  +   +++H A +D   S          + 
Sbjct: 121 YVKLNSGMNRLGFEPPEYAQVVHRLSAMENVETVTLMTHFANSD--LSTGTDKPHAIIKQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
            I     +   +A+S   L  P  H+   R G+ LYG +            ++  +T ++
Sbjct: 179 FIDGQFPV--CIANSGATLWHPKTHYDWVRSGVILYGASPSGRWQDIADKDLRATMTLQS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II   +  AGE + YG +        IA  A GYADGYP                G   
Sbjct: 237 QIIATHEIAAGESIGYGSKFTAPYPMKIATVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G   P+LG ++MDM   D+++  + ++GD ++++G ++ +DDVA A+GT  Y+L+  
Sbjct: 286 WLNGTRCPLLGTVSMDMLTIDVSECPTAKIGDRVELWGKNLPIDDVAQAAGTIGYELMCA 345

Query: 361 IGTRYAKFY 369
           +  R    Y
Sbjct: 346 LAKRVPVVY 354


>gi|238798495|ref|ZP_04641974.1| Alanine racemase 1 [Yersinia mollaretii ATCC 43969]
 gi|238717657|gb|EEQ09494.1| Alanine racemase 1 [Yersinia mollaretii ATCC 43969]
          Length = 359

 Score =  275 bits (703), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 169/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  +IA  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLEIAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFSAEDLPILAANRIETAIHSIEQLEALEAADLPAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  + A  F    S    + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGIRPEHAEAFYQRLSTCPNVIQPVNIMSHFSRADEPQVETTRQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G + S+A+S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 ATGKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPLDEPYASHFDLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWVSERDTRLGVVAIGYGDGYPRSA-----------PSGTPMWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    S +VGD + ++G ++ ++ VA  +G + Y+L+ ++ 
Sbjct: 290 NGREVGIVGRVSMDMISVDLGPDASDKVGDEVLLWGAELPVERVAACTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|229194629|ref|ZP_04321426.1| Alanine racemase [Bacillus cereus m1293]
 gi|228588850|gb|EEK46871.1| Alanine racemase [Bacillus cereus m1293]
          Length = 389

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKEVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CKVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|23100604|ref|NP_694071.1| alanine racemase [Oceanobacillus iheyensis HTE831]
 gi|50897491|sp|Q8ELR9|ALR1_OCEIH RecName: Full=Alanine racemase 1
 gi|22778837|dbj|BAC15105.1| alanine racemase [Oceanobacillus iheyensis HTE831]
          Length = 376

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 98/383 (25%), Positives = 160/383 (41%), Gaps = 26/383 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            S     +++ L AL  N           +R  AVVK + YG G   IA     AG +  
Sbjct: 4   TSYRDAWVEVSLDALTYNVRQFKNHLQEKSRLMAVVKADGYGHGAVPIARRSLEAGAEYL 63

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-G 119
            V  ++E +++R     A I +L        +     +L   + S   L           
Sbjct: 64  GVAFIDEALQIREAGILAPILLLGFTPSYAVREAVRHDLTLTVYSTETLEAIKDAARSLD 123

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQ 178
                 ++VD+G +R+GL   E +     S   +  ++  I +H A AD D S      Q
Sbjct: 124 KKAKIHIKVDSGMSRIGLRSSEEVISLMTSLQTEEIEVEGIFTHFADADNDESDAYTYKQ 183

Query: 179 LERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
            E F+ ++   +            +S+  +  P+ H  + R GISLYG      + +   
Sbjct: 184 FETFQGIMEALENEGYSIPIKHCCNSAATIAFPDMHMDMVRVGISLYGLYPGQHLKEILS 243

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q V++ +A+ +LI+     + +SYG   +    S IA   IGYADG+   LS +     
Sbjct: 244 LQQVMSFKAKPVLIKDVPPHQPISYGLTYETKETSKIATLPIGYADGFSRLLSNV----- 298

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDDV 346
                 G   + G   PI+G+I MD +M D+++    +   D + IFG +    I LD V
Sbjct: 299 ------GHVTVHGTACPIVGRICMDQSMIDVSEVQTDVTKDDIVTIFGDENAGYIPLDVV 352

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T +Y+ +  IG R  + Y
Sbjct: 353 AEQMQTIHYETVCLIGKRVPRHY 375


>gi|53721740|ref|YP_110725.1| alanine racemase [Burkholderia pseudomallei K96243]
 gi|126455974|ref|YP_001074998.1| alanine racemase [Burkholderia pseudomallei 1106a]
 gi|167848949|ref|ZP_02474457.1| alanine racemase [Burkholderia pseudomallei B7210]
 gi|242313527|ref|ZP_04812544.1| alanine racemase [Burkholderia pseudomallei 1106b]
 gi|254192792|ref|ZP_04899227.1| alanine racemase [Burkholderia pseudomallei S13]
 gi|52212154|emb|CAH38171.1| alanine racemase, catabolic [Burkholderia pseudomallei K96243]
 gi|126229742|gb|ABN93155.1| alanine racemase [Burkholderia pseudomallei 1106a]
 gi|169649546|gb|EDS82239.1| alanine racemase [Burkholderia pseudomallei S13]
 gi|242136766|gb|EES23169.1| alanine racemase [Burkholderia pseudomallei 1106b]
          Length = 374

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQLKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|107028781|ref|YP_625876.1| alanine racemase [Burkholderia cenocepacia AU 1054]
 gi|116690060|ref|YP_835683.1| alanine racemase [Burkholderia cenocepacia HI2424]
 gi|105897945|gb|ABF80903.1| alanine racemase [Burkholderia cenocepacia AU 1054]
 gi|116648149|gb|ABK08790.1| alanine racemase [Burkholderia cenocepacia HI2424]
          Length = 356

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  +  P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +            +++ +T  +
Sbjct: 179 GAESIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKSAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|317127074|ref|YP_004093356.1| alanine racemase [Bacillus cellulosilyticus DSM 2522]
 gi|315472022|gb|ADU28625.1| alanine racemase [Bacillus cellulosilyticus DSM 2522]
          Length = 381

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 91/385 (23%), Positives = 162/385 (42%), Gaps = 32/385 (8%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H      +++DL A++ N  ++      +    A VK N YG     +A A   AG    
Sbjct: 6   HFYRNTWVEVDLNAIRENVKNLKNHLPSHVHIMAAVKANGYGHSSVPVAEAALQAGATYL 65

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  ++E ++LR    +A I VL  + P    +  + ++   +     +   +K++    
Sbjct: 66  GVALLDEAIELRENGIKAPILVLGYVSPKYVNVAAEYDIRLTVFQSEWVEEAAKVLEADN 125

Query: 121 SHP--YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  +++DTG  RLG+   +E            L  +  + +H A AD+  +    +
Sbjct: 126 KGKIACHVKIDTGMGRLGIRTKEEGNALIVKLKKYSLFTIEGLFTHYATADELDTSYLEL 185

Query: 178 QLERFRTLISHYKGIE------ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
           Q +RF+ +IS ++             +S+  L   + ++ L R GIS+YG +        
Sbjct: 186 QQQRFKDMISWFEATWGAEVPMKHCGNSATALRFSSEYYNLVRYGISMYGLSPSEEIKEL 245

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
              P++   +  + I  I+KA  G+ +SYG   K   +  I    IGYADG+        
Sbjct: 246 LPFPLKQAFSLYSEITHIKKAEKGDGISYGATYKSPGEEWIGTIPIGYADGWIRA----- 300

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                     G+  + G  VPI+G+I MD  M  +     +++G  + I G      I +
Sbjct: 301 -------NATGEVLVNGERVPIVGRICMDQMMVAL--KQPVQIGTKVTIIGKQGNSFITI 351

Query: 344 DDVALASGTTNYDLLVRIGTRYAKF 368
           D+VA    T NY++   IG+R  + 
Sbjct: 352 DEVANRLNTINYEIPCTIGSRVPRI 376


>gi|256761608|ref|ZP_05502188.1| alanine racemase [Enterococcus faecalis T3]
 gi|256682859|gb|EEU22554.1| alanine racemase [Enterococcus faecalis T3]
          Length = 371

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQS 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLSPSYGLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|255026477|ref|ZP_05298463.1| alanine racemase [Listeria monocytogenes FSL J2-003]
          Length = 368

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 158/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++     
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEHLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+  ++EA        +    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTVEEARQIETTIASDNQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DDVA    
Sbjct: 294 ---HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGEDNGNAITADDVAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|167827477|ref|ZP_02458948.1| alanine racemase [Burkholderia pseudomallei 9]
 gi|167914212|ref|ZP_02501303.1| alanine racemase [Burkholderia pseudomallei 112]
 gi|226195224|ref|ZP_03790815.1| alanine racemase [Burkholderia pseudomallei Pakistan 9]
 gi|225933029|gb|EEH29025.1| alanine racemase [Burkholderia pseudomallei Pakistan 9]
          Length = 374

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQFKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|307244412|ref|ZP_07526523.1| alanine racemase [Peptostreptococcus stomatis DSM 17678]
 gi|306492231|gb|EFM64273.1| alanine racemase [Peptostreptococcus stomatis DSM 17678]
          Length = 387

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 157/376 (41%), Gaps = 26/376 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I+L  L+ N+  +        +   V+K NAYG G  +IA      G   F V  + 
Sbjct: 11  WLEINLDNLEYNFKGIKNKIPEGTKMCMVIKSNAYGHGAVQIARFYEELGADFFAVARLN 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR +     I  L   +P   +     N+   +  +       K+    G+     
Sbjct: 71  EAMELRDHGITTPILNLGYTNPLTIEDSIRNNVSMTVFDLELAQEIDKVAREIGIKAKIH 130

Query: 126 LQVDTGFNRLGL-----SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           L++DTG +RLG       L E  D   +    +   L  + +H A AD  +    ++Q  
Sbjct: 131 LKLDTGMSRLGYVVLDDKLDEIADEIKHISQFEGIILEGMYTHFATADARNKEFENLQTH 190

Query: 181 RFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQT 234
           RF  ++   K     IE    S+S  +L  +  + + RPGI  YG       S+   ++ 
Sbjct: 191 RFSEMVDKVKAMGVNIEYIHCSNSAEILDCDEKYDMVRPGIIQYGIYPSNEVSYSIDIKP 250

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+T +A++  ++   AG  +SYG     T    I   A GYADG+               
Sbjct: 251 VMTFKAKVSNVKVLDAGTSISYGRVYFTTVKEKIISIAAGYADGFLRGRRNP-------- 302

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-KLDDVALASGTT 353
                 +I G    I+G+I MD  M  +   + ++V D + IFG D+  +DDVA    T 
Sbjct: 303 ----YVYINGVKCSIVGRICMDQCMVRVPMDMDVKVNDDVVIFGDDLVSVDDVARGCDTI 358

Query: 354 NYDLLVRIGTRYAKFY 369
            ++++  +  R  + Y
Sbjct: 359 AHEVMCMMSRRVPRVY 374


>gi|254383132|ref|ZP_04998486.1| alanine racemase [Streptomyces sp. Mg1]
 gi|194342031|gb|EDX22997.1| alanine racemase [Streptomyces sp. Mg1]
          Length = 382

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 162/378 (42%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL A++ N  ++   +  A+  AVVK + YG G    A A  +AG       + +E 
Sbjct: 13  AEIDLDAVRGNVRALRERAPRAQVMAVVKADGYGHGAVPCARAALDAGAAWIGTATPQEA 72

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           + LR     A +        G  +   +  +   +S++       +   + G +    L+
Sbjct: 73  LALRAAGIDAPLMCWLWTPGGPWREAVEAGIDVSVSALWALDEVRAAARAAGRTARIQLK 132

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLERFRT 184
            DTG  R G    +  +    +   +      +    SH ACAD+P      +QL  FR 
Sbjct: 133 ADTGLGRAGCQPADWAELVGAAVAAQAEGTVRVTGLWSHFACADEPGHPSVPLQLAAFRD 192

Query: 185 LI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ----TV 235
           ++  +  +G+E     +A+S   L  P  HF L R G+++YG +       P Q      
Sbjct: 193 MLAYAEKEGVEPEVRHIANSPATLTLPESHFDLVRCGLAVYGVSPAPELGTPAQLGLRPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +A + L++   AG  VSYG       D+ +A+   GYADG P   SG          
Sbjct: 253 MTLKASVALVKAVPAGHGVSYGHHHVTAADTRLALIPAGYADGVPRHASGR--------- 303

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             G   + G +  + G++ MD  + D+     +E GD   +FGP    +   +D A A+ 
Sbjct: 304 --GPVLVGGKVRTVAGRVAMDQFVVDLGPDDLVEAGDEAVLFGPGDGGEPTAEDWAQAAD 361

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 362 TIAYEIVTRIGGRVPRVY 379


>gi|76818834|ref|YP_337437.1| alanine racemase [Burkholderia pseudomallei 1710b]
 gi|167741914|ref|ZP_02414688.1| alanine racemase [Burkholderia pseudomallei 14]
 gi|167819093|ref|ZP_02450773.1| alanine racemase [Burkholderia pseudomallei 91]
 gi|217419246|ref|ZP_03450753.1| alanine racemase [Burkholderia pseudomallei 576]
 gi|237507771|ref|ZP_04520486.1| alanine racemase [Burkholderia pseudomallei MSHR346]
 gi|254189746|ref|ZP_04896255.1| alanine racemase [Burkholderia pseudomallei Pasteur 52237]
 gi|254264373|ref|ZP_04955238.1| alanine racemase [Burkholderia pseudomallei 1710a]
 gi|254300019|ref|ZP_04967465.1| alanine racemase [Burkholderia pseudomallei 406e]
 gi|76583307|gb|ABA52781.1| alanine racemase [Burkholderia pseudomallei 1710b]
 gi|157810371|gb|EDO87541.1| alanine racemase [Burkholderia pseudomallei 406e]
 gi|157937423|gb|EDO93093.1| alanine racemase [Burkholderia pseudomallei Pasteur 52237]
 gi|217398550|gb|EEC38565.1| alanine racemase [Burkholderia pseudomallei 576]
 gi|234999976|gb|EEP49400.1| alanine racemase [Burkholderia pseudomallei MSHR346]
 gi|254215375|gb|EET04760.1| alanine racemase [Burkholderia pseudomallei 1710a]
          Length = 374

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQFKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|126444859|ref|YP_001062046.1| alanine racemase [Burkholderia pseudomallei 668]
 gi|167905905|ref|ZP_02493110.1| alanine racemase [Burkholderia pseudomallei NCTC 13177]
 gi|254183078|ref|ZP_04889670.1| alanine racemase [Burkholderia pseudomallei 1655]
 gi|126224350|gb|ABN87855.1| alanine racemase [Burkholderia pseudomallei 668]
 gi|184213611|gb|EDU10654.1| alanine racemase [Burkholderia pseudomallei 1655]
          Length = 374

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQLKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|322388802|ref|ZP_08062399.1| alanine racemase [Streptococcus infantis ATCC 700779]
 gi|321140421|gb|EFX35929.1| alanine racemase [Streptococcus infantis ATCC 700779]
          Length = 367

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  IDL A++ N   M   +       AVVK NAYG G   +A       V
Sbjct: 1   MKTSPHRPTKALIDLGAIRYNIQQMGEHTPKDALKWAVVKANAYGHGAVAVA-TAIQGDV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR      +I +L         +  +  +   ++ +  +       S
Sbjct: 60  DGFCVSNIDEALELRQAGITKKILILGVSEVESLSLAKEYAITLTVAGLEWIENLLATES 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L++D+G  R+G               +    +  I +H A AD+ S    + 
Sbjct: 120 DLSGLTVHLKIDSGMGRIGFRSTSEAAQAQALLKEHGANVEGIFTHFATADEESDSYFNQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QLE F+ +I+  + +      ++S+  L      F   R G S+YG       +   + +
Sbjct: 180 QLECFKEIIAGLQEVPELVHASNSATTLWHAETIFNAVRMGDSMYGLNPSGQVLELPYKL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T E+ I+ ++K  AG  + YG   +   + +IA   IGYADG+   +         
Sbjct: 240 KPALTLESAIVHVKKVPAGACMGYGATYQADSEQVIATLPIGYADGWTRDMQNFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G     +I   DVA+
Sbjct: 295 -------VLVDGQLCPIVGRVSMDQITIRLPKFYPL--GTKVTLIGSDGDKEITATDVAV 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  +  R  + Y
Sbjct: 346 YRGTINYEVVCLLSDRIPREY 366


>gi|47567489|ref|ZP_00238201.1| alanine racemase [Bacillus cereus G9241]
 gi|228983498|ref|ZP_04143708.1| Alanine racemase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|229154011|ref|ZP_04282140.1| Alanine racemase [Bacillus cereus ATCC 4342]
 gi|47555891|gb|EAL14230.1| alanine racemase [Bacillus cereus G9241]
 gi|228629532|gb|EEK86230.1| Alanine racemase [Bacillus cereus ATCC 4342]
 gi|228776242|gb|EEM24598.1| Alanine racemase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 389

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 90/387 (23%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CKVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|217957812|ref|YP_002336356.1| alanine racemase [Bacillus cereus AH187]
 gi|222094012|ref|YP_002528063.1| alanine racemase [Bacillus cereus Q1]
 gi|229137081|ref|ZP_04265705.1| Alanine racemase [Bacillus cereus BDRD-ST26]
 gi|217063401|gb|ACJ77651.1| alanine racemase [Bacillus cereus AH187]
 gi|221238061|gb|ACM10771.1| alanine racemase [Bacillus cereus Q1]
 gi|228646388|gb|EEL02598.1| Alanine racemase [Bacillus cereus BDRD-ST26]
          Length = 389

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CKVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|305665877|ref|YP_003862164.1| alanine racemase [Maribacter sp. HTCC2170]
 gi|88710652|gb|EAR02884.1| alanine racemase [Maribacter sp. HTCC2170]
          Length = 380

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 98/377 (25%), Positives = 155/377 (41%), Gaps = 19/377 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       L+IDL  L++N++ +   L+ + +  AVVK  AYG    KIA  L   GV  
Sbjct: 13  MAKASETVLEIDLNNLEHNYNYLRSKLNSDTKFLAVVKAYAYGSDAVKIALKLEAIGVDY 72

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V  V EGV LR+   +  I VL+      +K+I       + S      F       G
Sbjct: 73  FAVAYVNEGVALRMGGVKKSILVLHPQSVNFDKLIEHCLEPSLYSPKILREFLEATKRNG 132

Query: 120 -VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSV 177
              +P  ++ +TG NRLG    +          ++  +++ I SHLA   D         
Sbjct: 133 QKDYPVHIKFNTGLNRLGFWENDVDYIMDQLKERRDIRITSIFSHLAATEDSTEKQFTLK 192

Query: 178 QLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q++ F  ++S +           + ++SGI+  P  +F + R GI LYG  +       +
Sbjct: 193 QIDTFTKIVSDFEEKLGYSPLKHILNTSGIINYPEANFDMVRSGIGLYGFANDEEIDSQL 252

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + + T +  I  I K    E V Y          + A   +G+ADG              
Sbjct: 253 KPIATLKTIISQIHKIEPNESVGYNRAYTSEGYRVTATLPLGHADGIGRQYG-------- 304

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    + G + PI+G + MDM M DIT     + GD + IFG +      A  + T
Sbjct: 305 --KGKTFVSVNGTLAPIIGNVCMDMIMVDITGI-DCKEGDEVIIFGGNPTAHSFAATANT 361

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y+L+  I  R  + +
Sbjct: 362 ISYELITGISQRIKRVF 378


>gi|256617722|ref|ZP_05474568.1| alanine racemase [Enterococcus faecalis ATCC 4200]
 gi|257089263|ref|ZP_05583624.1| alanine racemase [Enterococcus faecalis CH188]
 gi|312904409|ref|ZP_07763569.1| alanine racemase [Enterococcus faecalis TX0635]
 gi|256597249|gb|EEU16425.1| alanine racemase [Enterococcus faecalis ATCC 4200]
 gi|256998075|gb|EEU84595.1| alanine racemase [Enterococcus faecalis CH188]
 gi|310632236|gb|EFQ15519.1| alanine racemase [Enterococcus faecalis TX0635]
 gi|315577240|gb|EFU89431.1| alanine racemase [Enterococcus faecalis TX0630]
          Length = 371

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 VLRLTSELIHVKRLAAGEGIGYGETYVTESEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|163840445|ref|YP_001624850.1| alanine racemase [Renibacterium salmoninarum ATCC 33209]
 gi|162953921|gb|ABY23436.1| alanine racemase [Renibacterium salmoninarum ATCC 33209]
          Length = 393

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 159/392 (40%), Gaps = 35/392 (8%)

Query: 1   MHSNEFL---RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+  +F    +  IDL A++ N   +  +S  A+  AVVK + YG G   +A A   AG 
Sbjct: 1   MNRADFPVERQAVIDLEAIRQNVRRIADISSPAKVMAVVKADGYGHGAVPVAKAALEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
                  V E + LR     A +               +  +   +S        +    
Sbjct: 61  SWIGTAHVNEALALREAGIDAPLLAWLHTPATDFAAAVEAGIDLGVSGWELEYIVAAARE 120

Query: 118 CGVSHPYALQVDTGFNRLGLS---LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                   L++DTG  R G +    +  +       ++ L ++  + SHLA AD+P+   
Sbjct: 121 QQRPARVHLKIDTGLGRNGSTSSLWESLIGEALEHQDEGLLRVVGLFSHLAVADEPNRAE 180

Query: 175 NSVQLERFRT--LISHYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-- 227
              QL RFR    I+   G++     LA++  I   P+ HF L R G+ +YG +      
Sbjct: 181 TDDQLARFREAVAIAEDSGVDVEVRHLANTPAIFSRPDTHFDLVRAGVGIYGLSPFAGQT 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
            +   +   +T +  +   +   A + VSYG   +    S + +  +GY DG P      
Sbjct: 241 SEELGLTPAMTLKTLVAHCKDVPADQGVSYGLNYRTAAPSTLGLIPMGYGDGVPR----- 295

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE-----VGDYIQIFGP-- 339
                  V  GG   I   +  ++G+I MD  + D+  +  +      +G    +FG   
Sbjct: 296 -------VATGGPVRIGDQVYSVVGRIAMDQMVVDLGPNSKMADGCSLLGHEAVLFGAAA 348

Query: 340 --DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             D  +D  A A+GT NY++++RI  R  + Y
Sbjct: 349 VGDPSVDLWAAAAGTINYEVVIRIAPRVPRIY 380


>gi|134279387|ref|ZP_01766100.1| alanine racemase [Burkholderia pseudomallei 305]
 gi|134249806|gb|EBA49887.1| alanine racemase [Burkholderia pseudomallei 305]
          Length = 374

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQFKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I + A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGIVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|56477426|ref|YP_159015.1| alanine racemase [Aromatoleum aromaticum EbN1]
 gi|81821118|sp|Q5P3K0|ALR_AZOSE RecName: Full=Alanine racemase
 gi|56313469|emb|CAI08114.1| Alanine racemase [Aromatoleum aromaticum EbN1]
          Length = 353

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 167/367 (45%), Gaps = 17/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+H   +  G  R  AVVK NAYG G  +       A    F V  
Sbjct: 2   RPARALIDLDALRHNYHLARSRHGG-RALAVVKANAYGHGAAQ-CARALAADADGFAVGF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR       I +L G+  P +   +   +L  V+    QL          +   
Sbjct: 60  LEEALELRAAGIDQPILLLEGVFAPAELDEVVRHDLWIVVHHAEQLRIIDHARPA-LPLE 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NR G    E         +        +++H A AD+P     + QL  F 
Sbjct: 119 VWLKMNSGMNRAGFLSHELRPAWQRLKDSGKVGGITLMTHFARADEPQVLATTEQLTAFD 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
           T      G   SLA+S  IL  P  H    RPGI LYG     ++ + ++ V+T E+ +I
Sbjct: 179 TATRELPG-PRSLANSGAILGWPAAHRDWARPGILLYGADPMPDEPNGLRPVMTLESAVI 237

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R+  AG  + YG +    R +   + A+GYADGYP ++             G    + 
Sbjct: 238 AVREIPAGAPLGYGARFHAERATRAGLVALGYADGYPRSVPN-----------GTPVAVD 286

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    ++G+++MD+   D+TD     +G  ++++G +I ++ +A A+ T +Y+LL  +  
Sbjct: 287 GLRTRLIGRVSMDLLTIDLTDLPDAGLGSRVELWGANIPVNRIAQAAKTISYELLCNV-K 345

Query: 364 RYAKFYT 370
           R    Y+
Sbjct: 346 RVRFEYS 352


>gi|110632757|ref|YP_672965.1| alanine racemase [Mesorhizobium sp. BNC1]
 gi|110283741|gb|ABG61800.1| alanine racemase [Chelativorans sp. BNC1]
          Length = 385

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 195/364 (53%), Gaps = 16/364 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  AAVVK +AYGLG  ++A AL +AG + FFV  +EEG
Sbjct: 11  LTVDLEAVTANWLLLAGRAAGAECAAVVKADAYGLGAAEVATALQDAGCRTFFVAHLEEG 70

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
           + LR      +RIFVL G  P  ++      L PV+ ++ +L  + K  +      P AL
Sbjct: 71  LSLRRTLGSGSRIFVLNGTPPDTQEEFGQAALTPVVGTINELQAWRKHAATKRGPIPVAL 130

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +RLGLS  +      ++   +   + L++SHLACAD+P    N  Q  RF+ L 
Sbjct: 131 QLDTGMSRLGLSPSDVSGIAADTTLLRGIHIELVMSHLACADEPGHSANESQRSRFQRLR 190

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                  AS+A+SSG  LG  +HF + RPG +LYG      + +PM  VV   AR++ +R
Sbjct: 191 RMLPQAPASIANSSGTFLGKGFHFSMIRPGAALYGINPTPYQPNPMCQVVKVAARVLQVR 250

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +A AG  + YG   +  R S++A  A+GYADG+P   S             G  + +G  
Sbjct: 251 QARAGTGIGYGHAARARRLSMLATIALGYADGWPCQAS-------------GAAYYRGQR 297

Query: 307 VPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +P +G+++MD  + D+T        GD ++   P   +D++   +G+  Y++L R+G R+
Sbjct: 298 LPFIGRVSMDSIILDVTGCSNPPREGDLVEFICPSQTVDEIGRLAGSIGYEVLTRLGRRF 357

Query: 366 AKFY 369
            + Y
Sbjct: 358 HRRY 361


>gi|212550479|ref|YP_002308796.1| alanine racemase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212548717|dbj|BAG83385.1| alanine racemase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
          Length = 383

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 175/383 (45%), Gaps = 27/383 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +++  L+++L A+ +N++   +L   + +   +VK N YG+G  +++  L N G     V
Sbjct: 8   DDYTILEVNLKAIIDNFNYFRSLLKRDTKIICMVKANGYGIGSYELSKTLQNNGADILAV 67

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
              +EGV LR       I V+    +   +   ++ +      ++   T         + 
Sbjct: 68  ALADEGVYLRKKGIHLPILVMNTEKYSLNKIFQYNLHPCIYNQNILDATIVETKKQDILH 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLE 180
           +P  L++DTG +R G + +E  D      N+    +  I SHLA  AD    +  + Q++
Sbjct: 128 YPIHLKIDTGMHRFGFNPEEIPDVAKILKNQNNVFVQSIFSHLAATADPFLDYFTNQQIK 187

Query: 181 RFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI-------NK 228
            F  L    + +     +  + +S+GI   P+  F + R GI LYG +          ++
Sbjct: 188 LFIYLSKQLEQLLGYQCQRHILNSAGIERFPDAQFDMVRLGIGLYGISVCTFSHTMGKDR 247

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
            + ++ V   + RI+ IR+   GE V Y     L RDS +A   +GYADG    L     
Sbjct: 248 PYGVKPVAVLKTRILQIREIKKGETVGYNRNGILDRDSFVACLPVGYADGLNRHLGNRCC 307

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDV 346
                     + FI G++ PI+G I MD  + DITD  + ++  GD ++IFG  I ++ +
Sbjct: 308 ----------QVFIGGHLCPIIGNICMDSCIIDITDITNKKIVEGDEVEIFGKHITINFL 357

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T  Y++L  I  R  + Y
Sbjct: 358 AKKLQTIPYEILTSISQRVKRVY 380


>gi|142467|gb|AAA22220.1| alanine racemase (EC 5.1.1.1) [Geobacillus stearothermophilus]
          Length = 386

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 150/378 (39%), Gaps = 28/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++DL A+ +N  ++  L  +     AVVK NAYG G  ++A      G     V
Sbjct: 5   HRDTWAEVDLDAIYDNVENLRRLLPDDTHIMAVVKANAYGHGDVQVARTALERGPPP-AV 63

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +A I VL    P    +     +   +     L   S L S     
Sbjct: 64  AFLDEALALREKGIEAPILVLGASRPADAALAAQQRIALTVFRSDWLEEASALYSGPFPI 123

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            + L++DTG  RLG+   +E               L  + +H A AD+ ++   S Q  R
Sbjct: 124 HFHLKMDTGMGRLGVKDEEETKRIVALIERHPHFVLEGLYTHFATADEVNTDYFSYQYTR 183

Query: 182 FRTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  ++            A+S+  L  P+  F + R GI++YG            +P++  
Sbjct: 184 FLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEA 243

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  +R++ ++K   GE VSYG       +  I    IGYADG                 
Sbjct: 244 FSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGVRR-------------L 290

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G+I MD  M  +   L +  G  + + G      I +DDVA    
Sbjct: 291 QHFHVLVDGQKAPIVGRICMDQCMIRLPGPLPV--GTKVTLIGRQGDEVISIDDVARHLE 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   I  R  + +
Sbjct: 349 TINYEVPCTISYRVPRIF 366


>gi|182679264|ref|YP_001833410.1| alanine racemase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182635147|gb|ACB95921.1| alanine racemase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 379

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 123/371 (33%), Positives = 193/371 (52%), Gaps = 16/371 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L +DL A+  NW ++ A+ G A   AVVK +AYG+G E +   L  AG + +FV  V 
Sbjct: 16  ATLSVDLAAIVRNWRTLQAVCGEAECGAVVKADAYGVGLEPVVRELSAAGCKTYFVAHVF 75

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-------G 119
           EG + R     A I+VL G+ PG      +  L PV+ S+P++  + +  +        G
Sbjct: 76  EGRRARAIDASAIIYVLNGLVPGTAPAYLEHGLRPVLCSLPEIEEWLQFCALFGRRSAEG 135

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            + P ALQ+DTG NRLGL L +       + +  +    LI+S    +   +      Q+
Sbjct: 136 ETLPAALQLDTGLNRLGLRLDQIERAADLTESLNI---KLILSQFIWSGQSNLARCETQV 192

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             F ++   +K + AS+A+S+GI L     + L RPG +LYGG     + +PMQ V+  E
Sbjct: 193 SLFESMRQPWKQVPASIANSAGIFLERTPLYDLVRPGYALYGGNPAPGRPNPMQGVLRLE 252

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ARI+ +     GE V Y G+        +A  +IGYADG P +  G        V  GG+
Sbjct: 253 ARILQVNHVEQGETVGYDGRYLAKSPRRLATISIGYADGIPRSALGS------EVHPGGE 306

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             +KG   P +G+++MD+T+ DIT +     GD +++ G  I +D++A  S T  Y++L 
Sbjct: 307 VVVKGVRCPFVGRVSMDLTVVDITLAPEAMRGDTVELIGKAISIDELATRSRTIGYEILT 366

Query: 360 RIGTRYAKFYT 370
            +G+R+ + YT
Sbjct: 367 NLGSRFYRRYT 377


>gi|229542538|ref|ZP_04431598.1| alanine racemase [Bacillus coagulans 36D1]
 gi|229326958|gb|EEN92633.1| alanine racemase [Bacillus coagulans 36D1]
          Length = 383

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       +++DL A+  N  +M  L   + +  AVVK NAYG G E +A     +G   
Sbjct: 1   MAFYRDTWVEVDLDAISENVGNMRQLLPEHTQIIAVVKANAYGHGAEYVAKTALASGASA 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  ++E + LR     A I VL    P    +  + N+   +     L    + +  G
Sbjct: 61  LAVAFLDEALALRKKGITAPILVLGAARPEDAGVAAEENISLTVFQKDWLEEAGRYL-TG 119

Query: 120 VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G+   QE  +       +       I +H A AD+  + +   Q
Sbjct: 120 RKLSVHLKCDTGMGRIGVRTLQELKEVEKIVNQQSCFYFEGIFTHFATADEIDTTLYEKQ 179

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
             +F+ ++ + +     +   +S+  L      F   R GI++YG +           P+
Sbjct: 180 YSQFQDMVLNLEHRPPYVHCANSAAALRFDQSPFNAVRFGIAMYGLSPSPAIKPVLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +   +   ++  +++  AG+ VSYG   + + D  IA   IGYADG+   LSG       
Sbjct: 240 KEAFSLHTKVTHVKQIHAGDTVSYGATYQASGDEWIATLPIGYADGWIRRLSGQ------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I G   PI+G+I MD  M  +  +  + VG    + G      I +D++A 
Sbjct: 294 ------EVIIDGERAPIVGRICMDQCMVKL--ARPVAVGTKATLIGKQGDLSIPVDEIAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++   I +R  + +
Sbjct: 346 KLETINYEVTCSISSRVPRIF 366


>gi|309388300|gb|ADO76180.1| alanine racemase [Halanaerobium praevalens DSM 2228]
          Length = 377

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 167/378 (44%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L+I + AL  N+  +   L+   + AAVVK +AYG G  KIA  L   G +   V 
Sbjct: 7   RPAWLEIKMKALAKNYKFIRSKLNKKTKIAAVVKADAYGHGAVKIAKKLVCLGTEYLCVG 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSH 122
           S EEG++LR    +  I VL  + P Q + I   +LI   +S                  
Sbjct: 67  SPEEGIELRNAGLEVPILVLAEVLPAQYQSILAGDLIQTAASRETLFALNKFAAKNNKKI 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+ DTG  R+G   +E  +    + +    +L  I SHLA AD+     ++ QL RF
Sbjct: 127 KIHLKCDTGMGRIGFLPEELFEVYKLALSLDNLKLEGIFSHLARADETEKEFSNKQLARF 186

Query: 183 RTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTV 235
              ++  K          +A+S+ ++     +  L RPGI LYG     ++ +   ++ +
Sbjct: 187 DCALNKIKKSNFKLPLIHIANSAAVIDLKATYLDLVRPGIILYGLLPSAELKEESFLEPI 246

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  + +I+ +R+      +SYG   K      +AV  IGY DGYP  LS           
Sbjct: 247 LEFKTKIVQLRELPPASTISYGSTYKTEASEKLAVLPIGYKDGYPRLLSNQ--------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             G+  I+G   PI GK+ M  T+  + +  +  +GD + + G     +I   ++A  + 
Sbjct: 298 --GEVLIRGQRAPIRGKVCMGQTIVSVEEIENAAIGDEVVLIGKQGTAEITAAEIAKLAS 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+++  +     K Y
Sbjct: 356 TISYEIVCNLDRNLKKIY 373


>gi|229161081|ref|ZP_04289069.1| Alanine racemase [Bacillus cereus R309803]
 gi|228622440|gb|EEK79278.1| Alanine racemase [Bacillus cereus R309803]
          Length = 408

 Score =  275 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++ID+ A+K+N         N +    A VK N YG G  ++A +   AGV    V  V+
Sbjct: 28  VEIDVNAVKHNVKEFKKHVNNEQIAMMAAVKANGYGHGAVEVAKSAIEAGVNQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E ++LR       I +L        +     +++  +  +  L   +++           
Sbjct: 88  EAIELREAGITVPILILGYTSVAAAEYAIQYDVMMTVYRIEDLQGINEIAQHLQKKAHIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  I +H + AD+      ++Q   F   
Sbjct: 148 IKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGIFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASL-----ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   +     ++S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTAKELGIHISYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHAVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T ++ ++VGD +  +G      I ++++A   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVTKAMPVQVGDEVVFYGKQGEEEIAVEEIADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|332884708|gb|EGK04965.1| hypothetical protein HMPREF9456_00718 [Dysgonomonas mossii DSM
           22836]
          Length = 823

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L IDL A+ +N++     L+   +   +VK + YG G  ++A  L         V   EE
Sbjct: 465 LDIDLDAIVHNYNFYRSRLNPKTKMVCMVKADGYGTGATEVAKTLQYHKCDYLAVAVAEE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           GV LR    +  I VL     G E++        V +      F  +    G++ +P  +
Sbjct: 525 GVFLRKQGIKVPIIVLNSEVGGFEELAMYALEPEVYNFRILDAFIKEAKLQGITNYPIHI 584

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG + ++  +      ++   ++  + SHLA ++     +    Q++ F+ +
Sbjct: 585 KIDTGMHRLGFTEEDIPELMERIKSQTGVRIQSVFSHLAASESWNFDNFTVDQIKTFKKI 644

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                   +  +   + +S+GI   PN    + R GISLYG +             T + 
Sbjct: 645 TKEIEKNCHYQVMKHILNSAGIERFPNEQMDMVRLGISLYGVSASGLNGLRNVC--TLKT 702

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AGE V YG +    +D+ IA   IGYADG                   GK 
Sbjct: 703 TILQIKDIKAGETVGYGRKGHFDKDATIATIRIGYADGLSRQFGNGV----------GKV 752

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G+MVPI+G I MD++M D+T    ++ GD + IFG +  + D+A    T  Y++L  
Sbjct: 753 LVNGHMVPIVGNICMDLSMIDVTGI-EVKEGDSVVIFGENPSVVDLAKEINTIPYEVLTS 811

Query: 361 IGTRYAKFY 369
           I +R    Y
Sbjct: 812 ISSRVKHIY 820


>gi|166031784|ref|ZP_02234613.1| hypothetical protein DORFOR_01485 [Dorea formicigenerans ATCC
           27755]
 gi|166028237|gb|EDR46994.1| hypothetical protein DORFOR_01485 [Dorea formicigenerans ATCC
           27755]
          Length = 389

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 96/385 (24%), Positives = 169/385 (43%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M     +  ++DL A+  N+  M A +    +  AV+K + YG G  +IA  L     + 
Sbjct: 1   MKQYSRVCERVDLDAIFYNFQMMKANIKDGVQMIAVIKTDGYGHGAVQIARLLEPVDYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            + V +++E V LR    +  I VL  I P Q + + +  +     +V      S L   
Sbjct: 61  GYAVATLDEAVVLRKNEIKKPILVLGCIFPDQWEAMIENEVRMTTYTVEMAKGVSNLAVK 120

Query: 118 CGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      +++DTG +RLG    ++++D           +L  + +H A AD+       
Sbjct: 121 MGKDAYIHIKLDTGMSRLGFQIHEDSVDAIEEISKMPGLKLEGMFTHFAKADETDKAYTD 180

Query: 177 VQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
           VQ+ ++  +    K           ++S+GI+     +  L R GIS+YG         K
Sbjct: 181 VQIGKYNYMRDELKKRGVTFPIYHCSNSAGIIDIKKANMDLVRAGISIYGLYPSEEVEKK 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           + P++  +   + +  ++    G  VSYGG     +++ +A   +GY DGYP +LS    
Sbjct: 241 NVPLRPAMELISHVSYVKTVPEGTPVSYGGTYVTEKETSLATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PI G++ MD  M D+TD   ++ GD + + G D    + ++
Sbjct: 298 --------KGYVLIHGKKAPIRGRVCMDQFMVDVTDIPDVKFGDKVTLVGKDGDEFLPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + Y
Sbjct: 350 TLSDLSGRFNYEFVCDLGKRIPREY 374


>gi|83816434|ref|YP_444716.1| alanine racemase [Salinibacter ruber DSM 13855]
 gi|83757828|gb|ABC45941.1| alanine racemase [Salinibacter ruber DSM 13855]
          Length = 450

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/377 (28%), Positives = 164/377 (43%), Gaps = 25/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +   +DL A+++N   +   +G A   A++K +AYG G   +A A Y AG++ + V  +
Sbjct: 58  PVTATVDLAAIRHNAGVLQERAGGADVMAIIKADAYGHGVRPVAQAAYEAGIRHYGVARL 117

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            EGV LR      RI VL    P Q     + +L   +SS        +  S        
Sbjct: 118 PEGVHLREAGHGGRILVLGAPAPTQLPRYAEYDLDLTVSSADVAAAVVRHASPEAPLRVH 177

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + VDTG  RLGL+  +         +    +L+ + +H A AD P S     QL+RFR +
Sbjct: 178 VTVDTGMGRLGLAPDDVPAVMTRLADASGVRLAGLWTHFATADAPGSSFAQTQLDRFRAV 237

Query: 186 ISHYKGIEASLASSSGILLG------PNYHFQLTRPGISLYG--GTDKINKSHPMQTVVT 237
           +         + +++   L         +   L R GI+LYG   T +++    ++  + 
Sbjct: 238 VGAVDVDVEHVHAANTGGLLTIGAPTHEFDASLVRSGIALYGLAATPELSARLDLRPAMR 297

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             AR+  ++   AG  +SYG Q +  R + IA   IGY DGYP   SG  S         
Sbjct: 298 LAARVTHLKTVPAGTPISYGAQWEAPRRTRIATLGIGYGDGYPRRCSGRAS--------- 348

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLS-----IEVGDYIQIFGP-DIKLDDVALASG 351
               I G   PI+G I MDM M D+          ++ GD   +FGP      DVA  S 
Sbjct: 349 --VRIGGASCPIVGTICMDMCMVDLGPPNEAPATRVDRGDEAVLFGPAGPTAYDVAQWSD 406

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++L  +  R  + 
Sbjct: 407 TIPYEILCGVSPRVPRR 423


>gi|255323995|ref|ZP_05365121.1| alanine racemase [Corynebacterium tuberculostearicum SK141]
 gi|255299175|gb|EET78466.1| alanine racemase [Corynebacterium tuberculostearicum SK141]
          Length = 368

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 161/372 (43%), Gaps = 22/372 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L+  IDL+A+ +N   +        +   VVK +AYG G  K+ P +  AG   F V +
Sbjct: 4   MLKTTIDLSAIAHNVRLIKEKVGPEVKLMCVVKADAYGHGAAKVVPVMARAGADCFGVAT 63

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR     A I           +      +   ++S+ Q       +        
Sbjct: 64  LREAVNLRRAGVDAPIVAWIWQTDEILEEALANGIEVAVNSLEQAHKL---VKADFPAEV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V+TG +R G+   +  +      +    ++  ++SH ACAD+P +  N  Q E FRT
Sbjct: 121 YVKVETGMHRSGVDEGDWAETFKVLRDAPHIKVLGLMSHFACADEPDNPHNDAQEEAFRT 180

Query: 185 --LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              ++   G+E     LA+S  +L  P+ +F+  R G + YG      + H ++  +T  
Sbjct: 181 ALQLAREIGLECPVNHLANSPAVLTRPSSYFEQVRVGAACYGLEPIEGREHGLRPAMTWS 240

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +I  ++   AGE   YG   K  +   +A    GYADG P    G              
Sbjct: 241 GQIFNVKPIQAGEGTCYGLTWKADKPGFLATVDCGYADGLPRGYQGDL-----------H 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
             I G++ P +G+I MD  + D+ ++   ++ G    IFG   +   D+A A+GT NY++
Sbjct: 290 VGIGGHLYPQVGRICMDQIVVDLGENPHGVDTGQDAVIFGNGGVSATDLAAAAGTINYEV 349

Query: 358 LVRIGTRYAKFY 369
           +     R  + Y
Sbjct: 350 VCLPDGRTEREY 361


>gi|296332832|ref|ZP_06875292.1| alanine racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673178|ref|YP_003864850.1| alanine racemase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150112|gb|EFG91001.1| alanine racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305411422|gb|ADM36541.1| alanine racemase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 389

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +  F R    +IDL+A+K N  +M    G +    AVVK NAYG G  + A A  +AG
Sbjct: 1   MSTKPFYRDTWAEIDLSAIKENVSNMKKHIGEHVHLMAVVKANAYGHGDAETAKAALDAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR    +A I VL  + P   +I  + +L     SV  L   ++ M
Sbjct: 61  ASCLAVAILDEAISLRKKGLKAPILVLGAVPPEYAEIAAEYDLTLTGYSVEWLQEAARHM 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVN 175
             G S  + L+VDTG NRLG+  +E +       ++    +   + +H A AD+      
Sbjct: 121 KKG-SLHFHLKVDTGMNRLGVKTEEEVHHVMAILDRNPRLKCKGVFTHFATADEKERGYF 179

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK----INKS 229
            +Q ERF+ LI+     +  +   +S+  L      F   R GI +YG            
Sbjct: 180 LMQFERFKELIAPLPLKKMMVHCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADITDEIP 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++    GE VSYG +    +D+ I    +GYADG+   L      
Sbjct: 240 FELHPAFTLHSTLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLK----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  G +  +KG  + I G+I MD  M ++        G  + + G      I +D+
Sbjct: 295 -------GTEILVKGKRLKIAGRICMDQFMVELDQEYP--PGTKVTLIGRQGDEYISMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IAGRLETINYEVSCTISSRVPRMF 369


>gi|126728695|ref|ZP_01744510.1| alanine racemase [Sagittula stellata E-37]
 gi|126710625|gb|EBA09676.1| alanine racemase [Sagittula stellata E-37]
          Length = 345

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 132/366 (36%), Positives = 190/366 (51%), Gaps = 26/366 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             RL IDL AL+ NW ++ ALS    T AVVK +AYGLG EK AP L  AG + FFV   
Sbjct: 3   MARLTIDLGALRANWTALAALSEG-ETGAVVKADAYGLGAEKCAPVLAAAGARTFFVAIA 61

Query: 66  EEGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEG++LR    P   I V  G  PG    I D +L+P+I+S+ Q+  + + +     HP+
Sbjct: 62  EEGLRLRRILGPGPEICVFSGHMPGDRDAIRDADLVPMINSIDQMLMHVEGL---PGHPF 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +Q+D+G NRLG+   E       +  +      L++SHLACAD+P   +N+ QL  FR 
Sbjct: 119 GIQLDSGMNRLGMEPAEWSALRDIALAQ---NPRLVMSHLACADEPDHAMNARQLAAFRD 175

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +         SL ++ G LLGP YHF +TRPG+ LYGG   ++     Q VV+ +  +I 
Sbjct: 176 MTDGIDA-PRSLGATGGTLLGPEYHFDMTRPGVGLYGGLPFVDA----QPVVSLDIPVIQ 230

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R  L GE V YG     +  S +A  A GYADG    +                 +   
Sbjct: 231 TRDVLPGETVGYGNTWTASAPSRVATIAGGYADGIHRAMG-----------SAAYVWAGE 279

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ILG+I+MD+   D+T    +   D++++ G    +D +A  +GT  Y++L  +G R
Sbjct: 280 TRCKILGRISMDLIAVDVTGLPELP--DHVELIGLHQGVDTLADWAGTIGYEVLTSLGAR 337

Query: 365 YAKFYT 370
           Y + YT
Sbjct: 338 YDRSYT 343


>gi|229074289|ref|ZP_04207333.1| Alanine racemase [Bacillus cereus Rock4-18]
 gi|228708841|gb|EEL60970.1| Alanine racemase [Bacillus cereus Rock4-18]
          Length = 389

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEASFYRDTWVEVDLDAIYNNIKHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDINVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVDGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|315148009|gb|EFT92025.1| alanine racemase [Enterococcus faecalis TX4244]
          Length = 371

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQS 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYGLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|313201238|ref|YP_004039896.1| alanine racemase [Methylovorus sp. MP688]
 gi|312440554|gb|ADQ84660.1| alanine racemase [Methylovorus sp. MP688]
          Length = 356

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 101/365 (27%), Positives = 163/365 (44%), Gaps = 21/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L AL++N   +   + +ART AVVK N YG G   +A  L       F V  
Sbjct: 2   RPITATIHLAALQHNLRRVRDYAPHARTMAVVKANGYGHGLLNVARGLAE--ADGFAVLR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E ++LR    +  + +L G+    +     D  +  V+ +  Q+    +  S  V   
Sbjct: 60  LQEALELRAAGYRQTLLLLEGVFESAELNAAADAGVSIVVHAEHQIAMLEQ-ASLPVPIA 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++++TG NRLG   Q                   +++H A AD+      ++Q  RF 
Sbjct: 119 VFVKMNTGMNRLGFVPQAFASAVARLAACPQVSSITLMTHFATADEAPGIATALQ--RFE 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEA 240
              +  +    SLA+S+ IL  P  H    RPGI LYG T           +Q V+  ++
Sbjct: 177 AGAAGMQ-YPKSLANSAAILRHPESHADWVRPGIMLYGATPVQSVTAAHFGLQAVMHLQS 235

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    GE + YG      R++ + + A GYADGYP    G           G   
Sbjct: 236 ELIALQTLPPGESLGYGATFVAERETRVGIVACGYADGYPRHAPG-----------GTPI 284

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   LG+++MDM   DITD    ++G  ++++G  I +D VA A GT  Y+LL  
Sbjct: 285 AVAGQVSKTLGRVSMDMLFVDITDIPGADIGSPVELWGATIPVDAVAEACGTVGYELLCA 344

Query: 361 IGTRY 365
           + +R 
Sbjct: 345 VTSRV 349


>gi|289164180|ref|YP_003454318.1| alanine racemase 1, PLP-binding, biosynthetic [Legionella
           longbeachae NSW150]
 gi|288857353|emb|CBJ11181.1| alanine racemase 1, PLP-binding, biosynthetic [Legionella
           longbeachae NSW150]
          Length = 359

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 166/366 (45%), Gaps = 17/366 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   RL I+ +AL +N   +   +   +  A+VK NAYG G   +AP L    V  F V 
Sbjct: 2   SRPTRLVIEPSALLHNLEQIKRFAPGKKIIAMVKANAYGCGVHIVAPVL-EGHVDAFGVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + L     +    +  G+    E  I   +    +   P    +           
Sbjct: 61  CIEEALILHKIGSRTPCILFQGVFSPDEFKIVAQHQFGCVIHQPHQLQWLLNTPLNTPIK 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             ++V+TG +RLG   QE  +          + +   +++HLACAD+P    N  Q+  F
Sbjct: 121 LWVKVNTGMHRLGFKPQELHEVMSALQTCTWVDKDIGLMTHLACADEPERIENYQQISLF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAE 239
              IS     + S+A+S+ I+  P  H  + RPGI LYG +   N+      +  V+   
Sbjct: 181 EN-ISITGFSQRSIANSAAIISFPQTHADVVRPGIMLYGVSPFANQTSIELGLLPVMRFV 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  +        V Y G  K  + S+I + A GY DGYP  +                
Sbjct: 240 SAISAVHHNPPFAPVGYSGIWKSEKHSVIGIVAAGYGDGYPRHI-----------AENTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +++G  VPI+G+++MDM   D+T+   ++ G  ++++G +I ++ VA A+GT+ Y+LL 
Sbjct: 289 VWVQGKEVPIVGRVSMDMLAVDLTEHQEVKPGAPVELWGKNILVERVAKAAGTSGYELLC 348

Query: 360 RIGTRY 365
           +I  R 
Sbjct: 349 QISERV 354


>gi|229172800|ref|ZP_04300355.1| Alanine racemase [Bacillus cereus MM3]
 gi|228610688|gb|EEK67955.1| Alanine racemase [Bacillus cereus MM3]
          Length = 408

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 158/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A    G+    V  V+
Sbjct: 28  IEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEVGIDQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYA 125
           E ++LR       I +L        +     +++  +  S                    
Sbjct: 88  EAIELREAGINVPILILGYTSVAAAEEAIQYDVMMTVYRSEDLQGINEIANRLQKKAQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++  K +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNAAKELGIHIPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHAVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  I+ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHIKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D++ ++ ++VGD +  +G      I +++VA   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDVSKAMPVQVGDEVVFYGKQGEEEIAVEEVADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|30260428|ref|NP_842805.1| alanine racemase [Bacillus anthracis str. Ames]
 gi|47525509|ref|YP_016858.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183271|ref|YP_026523.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|65317680|ref|ZP_00390639.1| COG0787: Alanine racemase [Bacillus anthracis str. A2012]
 gi|165871589|ref|ZP_02216235.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167634186|ref|ZP_02392508.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|167640352|ref|ZP_02398617.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|170687737|ref|ZP_02878952.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|170707904|ref|ZP_02898354.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|177653374|ref|ZP_02935584.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190567419|ref|ZP_03020333.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227812920|ref|YP_002812929.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229599992|ref|YP_002864879.1| alanine racemase [Bacillus anthracis str. A0248]
 gi|254686594|ref|ZP_05150453.1| alanine racemase [Bacillus anthracis str. CNEVA-9066]
 gi|254723566|ref|ZP_05185353.1| alanine racemase [Bacillus anthracis str. A1055]
 gi|254734928|ref|ZP_05192640.1| alanine racemase [Bacillus anthracis str. Western North America
           USA6153]
 gi|254739713|ref|ZP_05197406.1| alanine racemase [Bacillus anthracis str. Kruger B]
 gi|254754916|ref|ZP_05206951.1| alanine racemase [Bacillus anthracis str. Vollum]
 gi|254756959|ref|ZP_05208987.1| alanine racemase [Bacillus anthracis str. Australia 94]
 gi|30253749|gb|AAP24291.1| alanine racemase, spore-specific [Bacillus anthracis str. Ames]
 gi|47500657|gb|AAT29333.1| alanine racemase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177198|gb|AAT52574.1| alanine racemase [Bacillus anthracis str. Sterne]
 gi|164712693|gb|EDR18224.1| alanine racemase [Bacillus anthracis str. A0488]
 gi|167511754|gb|EDR87135.1| alanine racemase [Bacillus anthracis str. A0193]
 gi|167530500|gb|EDR93215.1| alanine racemase [Bacillus anthracis str. A0442]
 gi|170127262|gb|EDS96139.1| alanine racemase [Bacillus anthracis str. A0389]
 gi|170668264|gb|EDT19012.1| alanine racemase [Bacillus anthracis str. A0465]
 gi|172081414|gb|EDT66487.1| alanine racemase [Bacillus anthracis str. A0174]
 gi|190561546|gb|EDV15517.1| alanine racemase [Bacillus anthracis Tsiankovskii-I]
 gi|227006546|gb|ACP16289.1| alanine racemase [Bacillus anthracis str. CDC 684]
 gi|229264400|gb|ACQ46037.1| alanine racemase [Bacillus anthracis str. A0248]
          Length = 389

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKIALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|150004319|ref|YP_001299063.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides vulgatus ATCC 8482]
 gi|149932743|gb|ABR39441.1| putative alanine racemase and
           UDP-N-acetylmuramoylalanyl-D-glutamyl,
           6-diaminopimelate-D-alanyl-D-alanyl ligase fusion
           protein [Bacteroides vulgatus ATCC 8482]
          Length = 821

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+   +  V T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQ--IIHNVSTLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKAPYVGNICMDVCMIDVTDI-DCKEGDKTIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|294506479|ref|YP_003570537.1| Alanine racemase [Salinibacter ruber M8]
 gi|294342806|emb|CBH23584.1| Alanine racemase [Salinibacter ruber M8]
          Length = 465

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/377 (28%), Positives = 163/377 (43%), Gaps = 25/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +   +DL A+++N   +   +G A   A++K +AYG G   +A A Y AG++ + V  +
Sbjct: 68  PVTATVDLAAIQHNAGVLQERAGGADVMAIIKADAYGHGVRPVARAAYEAGIRHYGVARL 127

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            EGV LR      RI VL    P Q     + +L   + S        +  S        
Sbjct: 128 PEGVHLREAGHGGRILVLGAPAPTQLPRYAEYDLDLTVPSADIAAAVVRHASPEAPLRVH 187

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + VDTG  RLGL+  +         +    +L+ + +H A AD P S     QL+RFR +
Sbjct: 188 VTVDTGMGRLGLAPDDVPAVMTRLADAPGVRLAGLWTHFATADAPGSSFAQTQLDRFRAV 247

Query: 186 ISHYKGIEASLASSSGILLG------PNYHFQLTRPGISLYG--GTDKINKSHPMQTVVT 237
           +         + +++   L         +   L R GI+LYG   T +++    ++  + 
Sbjct: 248 VDAVDVDVEHVHAANTGGLLTIGAPTHEFDASLVRSGIALYGLAATPELSARLDLRPAMR 307

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             AR+  ++   AG  +SYG Q +  R + IA   IGY DGYP   SG  S         
Sbjct: 308 LAARVTHLKTVPAGTPISYGAQWEAPRRTRIATLGIGYGDGYPRRCSGRAS--------- 358

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLS-----IEVGDYIQIFGP-DIKLDDVALASG 351
               I G   PI+G I MDM M D+          ++ GD   +FGP      DVA  S 
Sbjct: 359 --VRIGGASCPIVGTICMDMCMVDLGPPNEAPATRVDRGDEAVLFGPAGPTAYDVAQWSD 416

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++L  +  R  + 
Sbjct: 417 TIPYEILCGVSPRVPRR 433


>gi|256964328|ref|ZP_05568499.1| alanine racemase [Enterococcus faecalis HIP11704]
 gi|307271848|ref|ZP_07553116.1| alanine racemase [Enterococcus faecalis TX0855]
 gi|256954824|gb|EEU71456.1| alanine racemase [Enterococcus faecalis HIP11704]
 gi|306511354|gb|EFM80356.1| alanine racemase [Enterococcus faecalis TX0855]
          Length = 371

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    GV  F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGVTGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|16077531|ref|NP_388345.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308287|ref|ZP_03590134.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221312609|ref|ZP_03594414.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221317532|ref|ZP_03598826.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221321808|ref|ZP_03603102.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|321314138|ref|YP_004206425.1| alanine racemase [Bacillus subtilis BSn5]
 gi|3915604|sp|P10725|ALR1_BACSU RecName: Full=Alanine racemase 1
 gi|1881274|dbj|BAA19301.1| ALANINE RACEMASE [Bacillus subtilis]
 gi|2632764|emb|CAB12271.1| D-alanine racemase [Bacillus subtilis subsp. subtilis str. 168]
 gi|320020412|gb|ADV95398.1| alanine racemase [Bacillus subtilis BSn5]
          Length = 389

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 167/384 (43%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +  F R    +IDL+A+K N  +M    G +    AVVK NAYG G  + A A  +AG
Sbjct: 1   MSTKPFYRDTWAEIDLSAIKENVSNMKKHIGEHVHLMAVVKANAYGHGDAETAKAALDAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR    +A I VL  + P    I  + ++     SV  L   ++  
Sbjct: 61  ASCLAVAILDEAISLRKKGLKAPILVLGAVPPEYVAIAAEYDVTLTGYSVEWLQEAARHT 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVN 175
             G S  + L+VDTG NRLG+  +E +       ++    +   + +H A AD+      
Sbjct: 121 KKG-SLHFHLKVDTGMNRLGVKTEEEVQNVMAILDRNPRLKCKGVFTHFATADEKERGYF 179

Query: 176 SVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            +Q ERF+ LI+      +    A+S+  L      F   R GI +YG     + S  + 
Sbjct: 180 LMQFERFKELIAPLPLKNLMVHCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADMSDEIP 239

Query: 234 TVV----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++    GE VSYG +    +D+ I    +GYADG+   L G D  
Sbjct: 240 FQLRPAFTLHSTLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLKGTDI- 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       +KG  + I G+I MD  M ++        G  + + G      I +D+
Sbjct: 299 -----------LVKGKRLKIAGRICMDQFMVELDQEYP--PGTKVTLIGRQGDEYISMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IAGRLETINYEVACTISSRVPRMF 369


>gi|295113944|emb|CBL32581.1| alanine racemase [Enterococcus sp. 7L76]
          Length = 371

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  AILDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVQFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|309782168|ref|ZP_07676898.1| alanine racemase [Ralstonia sp. 5_7_47FAA]
 gi|308919234|gb|EFP64901.1| alanine racemase [Ralstonia sp. 5_7_47FAA]
          Length = 374

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 151/367 (41%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + N+R  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQVARRHAPNSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    I+    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLAIVEQYRLTTTVHCEEQLRMLELARPKG-PIS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGVGTIVHMTHFSDADGPRGI--EHQLVAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL +S+  L  P  H    RPG+ +YG +            +   +T +
Sbjct: 178 QATQGLPG-EASLCNSAATLWHPKAHRDWVRPGVIIYGASPTGVAADIDGTGLMPAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG +  +     I + A GYADGYP    G D  H         
Sbjct: 237 SELIAIQDLQPGATIGYGSRFTVEHPMRIGIVACGYADGYPRHAPGWDGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+       VG  + ++G  + +DDVA ASGT  Y+L+ 
Sbjct: 290 VLVDGVRTHIVGRVSMDMITVDLAGVPEARVGTPVTLWGEGLPIDDVAHASGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|156933648|ref|YP_001437564.1| alanine racemase [Cronobacter sakazakii ATCC BAA-894]
 gi|156531902|gb|ABU76728.1| hypothetical protein ESA_01470 [Cronobacter sakazakii ATCC BAA-894]
          Length = 356

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/368 (25%), Positives = 157/368 (42%), Gaps = 22/368 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFV 62
           +  ++  +DL AL++N   +   +  +R  +VVK NAYG G +++  AL   G    F +
Sbjct: 2   SRPIQASLDLQALRHNLEVVRRAAPRSRVWSVVKANAYGHGLDRVWSAL---GATDGFAM 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++EE + LR    +  I +L G     E  +FD   +                      
Sbjct: 59  LNLEEAILLRERGWKGPILMLEGFFHADELPLFDKYRLTTSVHSNWQLKALAEAKLNAPL 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++++G NRLG   +                   +++H A AD P     ++     
Sbjct: 119 DVYLKINSGMNRLGFVPERVHTIWQQLKTIANVGQITLMAHFADADRPDGIDAAMVRI-- 176

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTA 238
               +       SLA+S+  L  P  HF   RPGI LYG +         +  +Q V+T 
Sbjct: 177 -EQAAEGIDAPRSLANSAAALWHPQAHFDWVRPGIVLYGASPSGQWRDIATSGLQPVMTL 235

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++ II ++    G+ V YG + +  R+  I + A GYADGYP                G 
Sbjct: 236 KSEIIGVQTLKPGDTVGYGSRYRAAREQRIGIVAGGYADGYPRHA-----------PDGT 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G    I+G ++MDM   D+T      +G  ++++G + K+DDVA A GT  Y+L+
Sbjct: 285 PVLVDGVRTGIVGTVSMDMLAVDLTPCPQAGIGSPVELWGNETKIDDVAAACGTIGYELM 344

Query: 359 VRIGTRYA 366
             +  R  
Sbjct: 345 CALAPRVP 352


>gi|29375437|ref|NP_814591.1| alanine racemase [Enterococcus faecalis V583]
 gi|227554961|ref|ZP_03985008.1| alanine racemase [Enterococcus faecalis HH22]
 gi|229548787|ref|ZP_04437512.1| alanine racemase [Enterococcus faecalis ATCC 29200]
 gi|255971304|ref|ZP_05421890.1| alanine racemase [Enterococcus faecalis T1]
 gi|255973923|ref|ZP_05424509.1| alanine racemase [Enterococcus faecalis T2]
 gi|256854302|ref|ZP_05559666.1| alanine racemase [Enterococcus faecalis T8]
 gi|256957289|ref|ZP_05561460.1| alanine racemase [Enterococcus faecalis DS5]
 gi|257077737|ref|ZP_05572098.1| alanine racemase [Enterococcus faecalis JH1]
 gi|257081097|ref|ZP_05575458.1| alanine racemase [Enterococcus faecalis E1Sol]
 gi|257086191|ref|ZP_05580552.1| alanine racemase [Enterococcus faecalis D6]
 gi|257415416|ref|ZP_05592410.1| alanine racemase [Enterococcus faecalis AR01/DG]
 gi|257418447|ref|ZP_05595441.1| alanine racemase [Enterococcus faecalis T11]
 gi|257421098|ref|ZP_05598088.1| alanine racemase [Enterococcus faecalis X98]
 gi|294781263|ref|ZP_06746609.1| alanine racemase [Enterococcus faecalis PC1.1]
 gi|307267928|ref|ZP_07549316.1| alanine racemase [Enterococcus faecalis TX4248]
 gi|307277317|ref|ZP_07558419.1| alanine racemase [Enterococcus faecalis TX2134]
 gi|307278454|ref|ZP_07559529.1| alanine racemase [Enterococcus faecalis TX0860]
 gi|307286658|ref|ZP_07566744.1| alanine racemase [Enterococcus faecalis TX0109]
 gi|307291702|ref|ZP_07571576.1| alanine racemase [Enterococcus faecalis TX0411]
 gi|312901611|ref|ZP_07760882.1| alanine racemase [Enterococcus faecalis TX0470]
 gi|312952881|ref|ZP_07771742.1| alanine racemase [Enterococcus faecalis TX0102]
 gi|29342897|gb|AAO80661.1| alanine racemase [Enterococcus faecalis V583]
 gi|227175904|gb|EEI56876.1| alanine racemase [Enterococcus faecalis HH22]
 gi|229306016|gb|EEN72012.1| alanine racemase [Enterococcus faecalis ATCC 29200]
 gi|255962322|gb|EET94798.1| alanine racemase [Enterococcus faecalis T1]
 gi|255966795|gb|EET97417.1| alanine racemase [Enterococcus faecalis T2]
 gi|256709862|gb|EEU24906.1| alanine racemase [Enterococcus faecalis T8]
 gi|256947785|gb|EEU64417.1| alanine racemase [Enterococcus faecalis DS5]
 gi|256985767|gb|EEU73069.1| alanine racemase [Enterococcus faecalis JH1]
 gi|256989127|gb|EEU76429.1| alanine racemase [Enterococcus faecalis E1Sol]
 gi|256994221|gb|EEU81523.1| alanine racemase [Enterococcus faecalis D6]
 gi|257157244|gb|EEU87204.1| alanine racemase [Enterococcus faecalis ARO1/DG]
 gi|257160275|gb|EEU90235.1| alanine racemase [Enterococcus faecalis T11]
 gi|257162922|gb|EEU92882.1| alanine racemase [Enterococcus faecalis X98]
 gi|294451599|gb|EFG20055.1| alanine racemase [Enterococcus faecalis PC1.1]
 gi|306497250|gb|EFM66793.1| alanine racemase [Enterococcus faecalis TX0411]
 gi|306502136|gb|EFM71420.1| alanine racemase [Enterococcus faecalis TX0109]
 gi|306504960|gb|EFM74155.1| alanine racemase [Enterococcus faecalis TX0860]
 gi|306506024|gb|EFM75192.1| alanine racemase [Enterococcus faecalis TX2134]
 gi|306515569|gb|EFM84096.1| alanine racemase [Enterococcus faecalis TX4248]
 gi|310629184|gb|EFQ12467.1| alanine racemase [Enterococcus faecalis TX0102]
 gi|311291299|gb|EFQ69855.1| alanine racemase [Enterococcus faecalis TX0470]
 gi|315027037|gb|EFT38969.1| alanine racemase [Enterococcus faecalis TX2137]
 gi|315032367|gb|EFT44299.1| alanine racemase [Enterococcus faecalis TX0017]
 gi|315034374|gb|EFT46306.1| alanine racemase [Enterococcus faecalis TX0027]
 gi|315153136|gb|EFT97152.1| alanine racemase [Enterococcus faecalis TX0031]
 gi|315155155|gb|EFT99171.1| alanine racemase [Enterococcus faecalis TX0043]
 gi|315157689|gb|EFU01706.1| alanine racemase [Enterococcus faecalis TX0312]
 gi|315165076|gb|EFU09093.1| alanine racemase [Enterococcus faecalis TX1302]
 gi|315167887|gb|EFU11904.1| alanine racemase [Enterococcus faecalis TX1341]
 gi|315171754|gb|EFU15771.1| alanine racemase [Enterococcus faecalis TX1342]
 gi|315574112|gb|EFU86303.1| alanine racemase [Enterococcus faecalis TX0309B]
 gi|315581739|gb|EFU93930.1| alanine racemase [Enterococcus faecalis TX0309A]
 gi|323480028|gb|ADX79467.1| alanine racemase [Enterococcus faecalis 62]
 gi|327534432|gb|AEA93266.1| alanine racemase [Enterococcus faecalis OG1RF]
 gi|329575938|gb|EGG57459.1| alanine racemase [Enterococcus faecalis TX1467]
          Length = 371

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|312113724|ref|YP_004011320.1| alanine racemase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218853|gb|ADP70221.1| alanine racemase [Rhodomicrobium vannielii ATCC 17100]
          Length = 384

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 193/364 (53%), Gaps = 9/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L I L AL+ N+      S  A TAAVVK NAYGLG + +  AL     + FFV +++E 
Sbjct: 24  LVIRLPALRRNYRRAAEASLKAETAAVVKANAYGLGIQPVLTALQKETARTFFVATLDEA 83

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQ 127
           + LR +   A I+ L G+ PG   +  D  L PV++S+ ++  + +         P A+Q
Sbjct: 84  LALRTFANDATIYTLNGLMPGTSAVYRDARLRPVLNSLAEVEEWSAYCREHEARLPAAIQ 143

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            DTG  R+GL  + A          +  + ++++SHL  AD+P   +N VQ +RF  + S
Sbjct: 144 FDTGMCRVGLEPEAADALAEKPELLQPFRPAVLMSHLVRADEPMHPLNEVQFKRFEAVTS 203

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + GI  SL +S+G LL   YH  L RPGI++YGG  +  +    + VV    RI+ +R 
Sbjct: 204 LFPGIAKSLVNSAGCLLRRKYHLDLARPGIAIYGGNPQKVEPSQFEPVVWLFGRIVQVRH 263

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G  V YGG + L RDS IA   +GYADGY   +S  D++      +G          
Sbjct: 264 GEKGFTVGYGGTETLRRDSRIATVGVGYADGYFRGVSSSDAKPGAVGHIGEHAL------ 317

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P++G+++MD+T FD TD     +  G ++++ G    +DD+A  +GT  Y++L  +G RY
Sbjct: 318 PLIGRVSMDLTTFDATDVPEALVHRGGFVELLGEKTTVDDLARHAGTIGYEVLTSLGRRY 377

Query: 366 AKFY 369
            + Y
Sbjct: 378 HRVY 381


>gi|78066817|ref|YP_369586.1| alanine racemase [Burkholderia sp. 383]
 gi|77967562|gb|ABB08942.1| Alanine racemase region [Burkholderia sp. 383]
          Length = 356

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  +  P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYLPEKYRAAWERARACHGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D++      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLSPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|300723428|ref|YP_003712733.1| alanine racemase [Xenorhabdus nematophila ATCC 19061]
 gi|297629950|emb|CBJ90570.1| alanine racemase 2, PLP-binding, catabolic [Xenorhabdus nematophila
           ATCC 19061]
          Length = 355

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 150/366 (40%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L A ++N   +    G ++  +VVK NAYG G ++I  +L       F +  
Sbjct: 3   RPILATIHLNAFRHNLAVIRQRIGKSKIWSVVKANAYGHGLDRIWQSLMQ--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G     +  I +T  +             + ++       
Sbjct: 61  MNEAIYLREQGWQGPILLLEGFFKSTDLQIINTYSLTTAVHSYWQLEEIEKITLDKPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + +E       +   K      ++SH   +D+        QL     
Sbjct: 121 YLKLNSGMNRLGFTPKEYPQAASMAAGIKNINSVTLMSHFPNSDNEIG--VREQLSVIER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
           L      +   LA+S  +L  P  H    RPGI LYG +            ++  +T ++
Sbjct: 179 L--QMNSLPHCLANSGAVLWHPETHQDWVRPGIILYGASPSGKWCDIADVGLKATMTLQS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II +     GE + YG +    +   +   A GYADGYP                G   
Sbjct: 237 EIIAVHTLSKGEKIGYGSRYTTQKTMRVGTVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG ++MDM   D+T      +G  ++++G D+ +D+VA ++GT  Y+LL  
Sbjct: 286 MVDGVRTQLLGAVSMDMLTVDLTPCPQANIGSVVELWGEDLPVDEVAESAGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LTRRVP 351


>gi|226326592|ref|ZP_03802110.1| hypothetical protein PROPEN_00442 [Proteus penneri ATCC 35198]
 gi|225205017|gb|EEG87371.1| hypothetical protein PROPEN_00442 [Proteus penneri ATCC 35198]
          Length = 363

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/370 (29%), Positives = 176/370 (47%), Gaps = 21/370 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N+  +   + ++   AVVK NAYG G  + A  L +     F V  + 
Sbjct: 4   ATAVIDRRALRHNFQHVRDYAPHSHLIAVVKANAYGHGLLETAYTLMDN-ADCFGVARIG 62

Query: 67  EGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR       I +L G        I+   ++  V+ S  QL    +  +        
Sbjct: 63  EALTLRSGGIVKPILLLEGFFDIADLPILVVNHIETVVHSQEQLEALEQ-ANLDEPVKVW 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFR 183
           +++DTG +RLG+  ++A  F    S  K + Q   I+SH + AD+P        Q+  F+
Sbjct: 122 MKIDTGMHRLGIRPEDAQAFYLRLSACKNVQQPVNIVSHFSRADEPDVPEATQKQISLFQ 181

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAE 239
             I    G + S+++S+GIL  P  H+Q  RPGI  YG +     +  K   +   +T +
Sbjct: 182 DFIQDKAG-DKSISASAGILFWPQVHYQWVRPGIITYGISPTGDERTGKDFGLTPAMTLK 240

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             +I +RK  AGE V YGG     +D+ + V AIGY DGYP +              G  
Sbjct: 241 TSLIAVRKHKAGEPVGYGGTWVSEKDTYLGVIAIGYGDGYPRSA-----------PSGTP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +I G  VPI+G+++MDM   D+   L   VGD   ++G  + ++++A  SG + Y+L+ 
Sbjct: 290 VWINGRKVPIVGRVSMDMISVDLGTELIDSVGDEAILWGDVLPVEEIAKYSGISAYELIT 349

Query: 360 RIGTRYAKFY 369
           ++ +R    Y
Sbjct: 350 KLTSRVIMEY 359


>gi|302524053|ref|ZP_07276395.1| alanine racemase [Streptomyces sp. AA4]
 gi|302432948|gb|EFL04764.1| alanine racemase [Streptomyces sp. AA4]
          Length = 373

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 159/368 (43%), Gaps = 21/368 (5%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S+      IDL AL++N   + A +  A    VVK + YG G   +  A   AG      
Sbjct: 4   SSPHAETVIDLGALRHNVSLLAARAPGAAVMCVVKADGYGHGAVPVGRAAVEAGASWLGT 63

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVS 121
            S++E + LR      R+F    +         + ++   +SS+ +     +     G  
Sbjct: 64  CSLQEALDLRAAGLSGRLFSWLDVPELDFTPGIEADIDLGVSSLGELARVEAAAERAGKR 123

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG +R G       +    +   +  ++  I SHLACAD+        Q + 
Sbjct: 124 ARVHLKIDTGLSRNGCPPAAWPELVEAAAKARGVEVVAIWSHLACADELGHASIDAQAKL 183

Query: 182 FRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           F       +         LA+S+  L  P+ HF+L RPGI++YG          ++ V+T
Sbjct: 184 FAEAYDAARAAGLDPIRHLANSAATLTRPDLHFELVRPGIAMYGLNPVP-TDDDLRPVMT 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++L +   AGE VSYG       D+ +A+  +GYADG P TLSG            
Sbjct: 243 FRSTVVLTKPLAAGESVSYGHTWTAREDTTLALVPVGYADGVPRTLSGRMD--------- 293

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
              ++ G   P++G+I MD  + ++ +     VGD + +FG     +    + A   GT 
Sbjct: 294 --VWLGGKRRPVVGRICMDQLVVNVGNEDVPTVGDEVVLFGAGRSGEPTAREWADKLGTI 351

Query: 354 NYDLLVRI 361
           +Y+++  +
Sbjct: 352 DYEIVTSM 359


>gi|291003863|ref|ZP_06561836.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338]
          Length = 378

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/380 (26%), Positives = 164/380 (43%), Gaps = 27/380 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H++    L+ID+ A+++N   + A +  ART  +VK + YG G   +A A   AG     
Sbjct: 5   HAHR-ADLRIDVDAIRHNVGVLAARAAGARTMVIVKSDGYGHGAVTVARAALEAGAGQIG 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGV 120
           V ++ E V LR     A +                  +    SSV       +     G+
Sbjct: 64  VAALGEAVALREAGITAPLMCWLYSRGDDFAPALRHGVELSASSVRGLREIAATAAELGL 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSV 177
                L++DTG  R G    E  +    +   +         + SHLACAD+        
Sbjct: 124 VARLHLKIDTGLCRSGCPEAEWPNLVDEAAKAEADGHVEVVAVWSHLACADELGHPSIDN 183

Query: 178 QLERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI-NKSHPM 232
           Q  RFR      +    G    LA+S+ +L  P+ HF++ RPGI++YG      +  H +
Sbjct: 184 QALRFRRAYERARTAGLGPIRHLANSAAVLTRPDLHFEMVRPGIAVYGLDPVPQDGDHGL 243

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T  + + L ++  AGE VSYG      R   +A+  +GYADG P TLSG  S    
Sbjct: 244 RPAMTFRSSVSLTKRVAAGESVSYGHTWTADRPVNLALVPVGYADGVPRTLSGRMS---- 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                   ++ G   P++G++ MD  +  + D   +  GD + +FGP    +    + A 
Sbjct: 300 -------VWLAGRRRPVVGRVCMDQLVV-LCDDDVVREGDEVILFGPGDRGEPTAAEWAD 351

Query: 349 ASGTTNYDLLVRI-GTRYAK 367
             GT +Y+++  +   R  +
Sbjct: 352 ELGTIHYEIVTGMYRPRVTR 371


>gi|167578429|ref|ZP_02371303.1| alanine racemase [Burkholderia thailandensis TXDOH]
          Length = 374

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + N+R  +VVK NAYG G E++ PAL +       +  
Sbjct: 3   RPIVARIHPDAIAHNLAIVRKKAPNSRVWSVVKANAYGHGIERVYPALAD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFDAADIEIADRHRLTVAVHGDEQLKLLTSAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG       D    +          ++ H A ADD        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPSAFRDAWERAAAAPSIGRIALMMHFANADDGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGATRHVADVPLRAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG +    R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLSPGETVGYGRRFAAEREMRIGVVACGYADGYPRHA-----------PSGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T      VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVLTRVVGRVSMDMLTVDLTPCPHAGVGSTVELWGKQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|145294758|ref|YP_001137579.1| alanine racemase [Corynebacterium glutamicum R]
 gi|166967410|sp|A4QBT0|ALR_CORGB RecName: Full=Alanine racemase
 gi|140844678|dbj|BAF53677.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 361

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 162/372 (43%), Gaps = 20/372 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  KIDL A+ +N   +  ++G A+  AVVK NAY  G EK+AP +   G   F V +
Sbjct: 2   NLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E ++LR       +           +   D N+   + S           +       
Sbjct: 62  LAEAMQLRDIGISQEVLCWIWTPEQDFRAAIDRNIDLAVISPAHAKALID--TDAEHIRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           ++++D+G +R G+  QE              +++ + +HLACAD+P +     Q+  FR 
Sbjct: 120 SIKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTHLACADEPENPETDRQIIAFRR 179

Query: 185 --LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              ++   G+E     + +S   L   + H ++ RPG++ YG      + H ++  +T E
Sbjct: 180 ALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGREHGLKPAMTWE 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A++ ++++  AG+  SYG   +      +AV   GYADG P    G  S           
Sbjct: 240 AKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGMPRHAQGKFS----------- 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD-IKLDDVALASGTTNYDL 357
             I G   P +G++ MD  +  + D+   +E G    IFG +     D A    T NY++
Sbjct: 289 VTIDGVDYPQVGRVCMDQFVISLGDNPHGVEAGAKAVIFGENGHDATDFAERLDTINYEV 348

Query: 358 LVRIGTRYAKFY 369
           + R   R  + Y
Sbjct: 349 VCRPTGRTVRAY 360


>gi|300774542|ref|ZP_07084405.1| Mur ligase domain protein/alanine racemase [Chryseobacterium gleum
           ATCC 35910]
 gi|300506357|gb|EFK37492.1| Mur ligase domain protein/alanine racemase [Chryseobacterium gleum
           ATCC 35910]
          Length = 815

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 150/369 (40%), Gaps = 18/369 (4%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   +L     +  A+VK NAYGLG  +++  L +  +    V   +E
Sbjct: 454 LEVNLNAILHNINYHKSLLKPGTKMMAMVKANAYGLGSFEVSEFLQHHHIDYLGVAYADE 513

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV+LR       I V+       + II       + S      FY  +   G    +P  
Sbjct: 514 GVELRKKGITTPIIVMNPEQHSYQTIIEYNLEPEIYSFRVLELFYEAVQKSGYDKKYPIH 573

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++++TG +RLG    E    +    +K +   S+     +            QLE F   
Sbjct: 574 IKLETGMHRLGFKDFELDQLSETLSHKNVKVQSMFSHLSSSDMPEEKEFTLKQLEVFEKN 633

Query: 186 ISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            S+            + +S+GI    ++   + R GI + G +        +++VV+ + 
Sbjct: 634 SSYLIEKLGYTSIRHILNSAGITSYKDHQHDMVRIGIGMLGESADPEIQKQLRSVVSFKT 693

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  I     GE V Y  + K    + IA   +GYADG P  +              G  
Sbjct: 694 VISQISTVENGESVGYSRRYKTDHPTRIATIPVGYADGIPRLIGNQV----------GNV 743

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            +   + PI+G I MDM M ++    +++ GD + +F     L + A    T  Y++L  
Sbjct: 744 GVNKTLAPIVGNICMDMMMINVDHIPNVKEGDTVTVFNAHPSLKEFAGYCKTITYEVLTS 803

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 804 ISPRVKRIY 812


>gi|51594730|ref|YP_068921.1| alanine racemase [Yersinia pseudotuberculosis IP 32953]
 gi|186893733|ref|YP_001870845.1| alanine racemase [Yersinia pseudotuberculosis PB1/+]
 gi|51588012|emb|CAH19616.1| alanine racemase (biosynthetic) [Yersinia pseudotuberculosis IP
           32953]
 gi|186696759|gb|ACC87388.1| alanine racemase [Yersinia pseudotuberculosis PB1/+]
          Length = 359

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G    A  L +     + V  + 
Sbjct: 4   ATAVIDRHALRHNLQQIRRLAPQSRLVAVVKANAYGHGLLAAAHTLQD--ADCYGVARIS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +  +        +
Sbjct: 62  EALMLRAGGIVKPILLLEGFFDAEDLPVLVANHIETAVHSLEQLVALEAATLSAPINAWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   +A  F    S  + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPDQAEAFYQRLSACRNVIQPVNIMSHFSRADEPEVAATQQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARI 242
            +   G + S+A+S GIL  P  H    RPGI LYG +       +   +   +T ++ +
Sbjct: 182 AAGKPG-KQSIAASGGILRWPQAHRDWVRPGIVLYGVSPFDTPYGRDFGLLPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGESVGYGGTWVSERDTRLGVIAIGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD   ++G ++ ++ VA  +G + Y+L+  + 
Sbjct: 290 NGREVSIVGRVSMDMISIDLGPESTDKVGDEALMWGAELPVERVAACTGISAYELITNLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|33866630|ref|NP_898189.1| alanine racemase [Synechococcus sp. WH 8102]
 gi|33633408|emb|CAE08613.1| putative alanine racemase [Synechococcus sp. WH 8102]
          Length = 376

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 178/379 (46%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   +++  TA++ N   +   L    +  AVVK + YG G   +A A    G     V
Sbjct: 7   RQRAWVEVYPTAIEANCRLLCRQLVTGCQLMAVVKADGYGHGAVTVARASLRGGASSLGV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--G 119
            +++EG++LR    +A + +L  +  P   +   +  L+P +SS+ +    + + +    
Sbjct: 67  ATLQEGLELRDAGIEAPVLILSALPSPEDLRHCLEQRLMPTLSSLDEANTAAAVAAERGN 126

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              P  L++DTG  RLG   QE      +       +L  + SHLACAD+    +  +QL
Sbjct: 127 ERFPVQLKLDTGMARLGGEWQEGAQLVQSIRTLPQLELVGLYSHLACADELGDQLTHLQL 186

Query: 180 ERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
           +RFR++I        G+   LA+S+G L  P  H  + R G++LYG +    +     +Q
Sbjct: 187 QRFRSVIEALPDGGSGLCCHLANSAGTLQDPRLHLDMVRVGLALYGQSPADHLGLDLALQ 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  +AR+ LIR+  +G  VSYG +   +R S +AV AIGYADG    LSG        
Sbjct: 247 PALAVKARVSLIREVPSGSGVSYGHRFVTSRPSRLAVIAIGYADGVVRALSGRID----- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                    +G  VP +G ITMD  + D TD   + VGD + + G D    I+  D +  
Sbjct: 302 ------VLHRGRRVPQVGNITMDQIILDATDVEELTVGDNVTLLGQDGDDCIRPQDWSAR 355

Query: 350 SGTTNYDLLVRIGTRYAKF 368
            G+  +++L     R  + 
Sbjct: 356 CGSIPWEILCGFKHRLPRV 374


>gi|311744760|ref|ZP_07718556.1| alanine racemase [Aeromicrobium marinum DSM 15272]
 gi|311311877|gb|EFQ81798.1| alanine racemase [Aeromicrobium marinum DSM 15272]
          Length = 375

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 101/386 (26%), Positives = 158/386 (40%), Gaps = 32/386 (8%)

Query: 1   MHSN---EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M ++         +DL A + N   +  L+  +   AVVK +AYG G  +I  A   AG 
Sbjct: 1   MSAHGGPPQAEAHVDLDAYRENLRLLGDLAPASALMAVVKADAYGHGMTEIGRAARQAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
               V +VEE + LR       +                 ++    SSV Q     ++++
Sbjct: 61  DWLGVATVEEALALRSGGDDGPVLCWLASPGASYAAAVAADVEVTASSVGQ---LEEIVA 117

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHV 174
            G      L+VDTG +R G + +E  D    +   +           SHLACADDP    
Sbjct: 118 AGGRPRVQLKVDTGLSRNGAAPEEWPDLVEAAARARDAGRIEITGTWSHLACADDPEHPA 177

Query: 175 NSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK- 228
           N +Q   FR  +     +        LA+S+  L  P+ H  L R GI+ YG        
Sbjct: 178 NELQERAFRAALDVVTAAGVDPGLRHLANSAATLTRPSTHLDLVRVGIAAYGIPPDPRLS 237

Query: 229 -SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
              P++  +T  AR+  +R+  AG  VSYG +    R + + +  +GY +G     +G  
Sbjct: 238 IDLPLRPALTLRARLAAVRRVPAGTGVSYGHRYVTERPTTLGLVPVGYGEGVHRAATGRA 297

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKL 343
                           G  VP++G I MD  + D+ D    + GD + +FG     +   
Sbjct: 298 EAGFA-----------GRRVPVVGTICMDQLVVDLGDLP-ADRGDVVTLFGDGSDGEPSA 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
            D A A+GT  Y+++  +G R    Y
Sbjct: 346 TDWAEAAGTIGYEVVTGLGGRIRHTY 371


>gi|315174906|gb|EFU18923.1| alanine racemase [Enterococcus faecalis TX1346]
          Length = 371

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N  +    L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQNECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQE 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|126662547|ref|ZP_01733546.1| alanine racemase [Flavobacteria bacterium BAL38]
 gi|126625926|gb|EAZ96615.1| alanine racemase [Flavobacteria bacterium BAL38]
          Length = 780

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 19/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L A+ +N +     L  + +   +VK   YG G  +IA  L +  V    V   +E
Sbjct: 420 LEINLDAISHNLNFYKSKLKHDTKIMVMVKAFGYGNGGYEIAKLLEHHKVDYLGVAFADE 479

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
           G++LR       I VL   +     +I       + S      F        + ++P  +
Sbjct: 480 GIELRKAGITTPIMVLNPENSSFRAMIAYNLEPEIYSITGLQAFLKIAQEQNISNYPIHI 539

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
           ++DTG +RLG  + +  +      N    ++  + SHLA +DD   +    +Q +RF  +
Sbjct: 540 KLDTGMHRLGFEMPQMDELVSLLKNNNFIKIKSVFSHLAASDDKKLNEFTQLQFQRFDEM 599

Query: 186 ISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +    +        + ++SGI   P    ++ R GI LYG  +   +   ++ V T + 
Sbjct: 600 YNAIAAVLSYIPIRHILNTSGIFNYPEKQMEMARLGIGLYGIGNSEQELQTLENVSTLKT 659

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  IR+ L GE + Y  +  +T+   +A   IGYADG                   G  
Sbjct: 660 IISQIREVLPGESIGYSRKYSVTKKMKVATIPIGYADGIKRAWGN----------EKGYV 709

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I      ILG I MDM M D+T+  S   GD + +FG + K+ ++A   GT  Y++L  
Sbjct: 710 IINNEKATILGSICMDMMMVDVTNI-SCNTGDEVIVFGKNPKVTEMASVIGTIPYEILTG 768

Query: 361 IGTRYAKFY 369
           I  R  + +
Sbjct: 769 ISQRVKRIF 777


>gi|325954628|ref|YP_004238288.1| alanine racemase [Weeksella virosa DSM 16922]
 gi|323437246|gb|ADX67710.1| Alanine racemase [Weeksella virosa DSM 16922]
          Length = 824

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 103/371 (27%), Positives = 158/371 (42%), Gaps = 22/371 (5%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L  L++N  +  +L     +  A+VK N+YG+G  +IA  L    V    V   +E
Sbjct: 463 LEINLEHLEHNIQTYRSLLKPETKIMAMVKANSYGIGSFEIANVLQQMKVNFLGVAIADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV---SHPY 124
           G +LR       I V+          + D  L P I +   L  + + +         P 
Sbjct: 523 GKELRKAGISTPIIVMNPEQHS-YATVIDYQLEPEIYTARVLQLFLQKLQEKQISQPFPI 581

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFR 183
            ++++TG NRLG    +  +      +  L  +  I SHLA AD P        Q   F 
Sbjct: 582 HIKLETGMNRLGFKPNQLDELIEILRSTNLVYVRSIFSHLATADIPTEKDYAQQQFGVFN 641

Query: 184 ---TLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                I+   G      + +S GI+  P + + + R GI +YG  +  +    ++ VV  
Sbjct: 642 SSYHYITDKIGYYPIKHILNSPGIVAYPQHQYDMVRLGIGMYGYCEYSDFMQKLENVVQF 701

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I  I +   GE VSYG +    R S IA   +GYADG   +L           +   
Sbjct: 702 KTVISQINEIEKGETVSYGRRFTAERHSRIATLPVGYADGIRRSLG----------YGNA 751

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           K  I G +   +G I MDM M D+TD    + GD + IFG +  L   A    T  Y++L
Sbjct: 752 KVNINGQLAATVGTICMDMMMVDVTDI-DCKAGDEVIIFGENPSLSKFAEWMQTIPYEVL 810

Query: 359 VRIGTRYAKFY 369
             I +R  + Y
Sbjct: 811 TSISSRVQRVY 821


>gi|187928333|ref|YP_001898820.1| alanine racemase [Ralstonia pickettii 12J]
 gi|226711056|sp|B2UAX2|ALR_RALPJ RecName: Full=Alanine racemase
 gi|187725223|gb|ACD26388.1| alanine racemase [Ralstonia pickettii 12J]
          Length = 374

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 153/367 (41%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + N+R  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQIARRHAPNSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    I+    L   +    QL         G +  
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLAIVEQYRLTTTVHCEEQLRMLELARLKGPT-S 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGVGTIVHMTHFSDADGPRGI--EHQLAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL++S+  L  P  H    RPG+ +YG +            +   ++ +
Sbjct: 178 RATQGLPG-EASLSNSAATLWHPKAHRDWVRPGVIMYGASPTGVAADIDGTGLMPAMSLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG +  +     I V A GYADGYP    G D  H         
Sbjct: 237 SELIAIQDLQPGATIGYGSRFTVEHPMRIGVVACGYADGYPRHAPGWDGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+       VG  + ++G  + +DDVA ASGT  Y+L+ 
Sbjct: 290 VLVDGVRTHIVGRVSMDMITVDLAGVPEARVGTPVTLWGEGLPIDDVAQASGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|22124492|ref|NP_667915.1| alanine racemase [Yersinia pestis KIM 10]
 gi|45440330|ref|NP_991869.1| alanine racemase [Yersinia pestis biovar Microtus str. 91001]
 gi|108809954|ref|YP_653870.1| alanine racemase [Yersinia pestis Antiqua]
 gi|108813509|ref|YP_649276.1| alanine racemase [Yersinia pestis Nepal516]
 gi|145600898|ref|YP_001164974.1| alanine racemase [Yersinia pestis Pestoides F]
 gi|150260633|ref|ZP_01917361.1| alanine racemase (biosynthetic) [Yersinia pestis CA88-4125]
 gi|162420301|ref|YP_001605330.1| alanine racemase [Yersinia pestis Angola]
 gi|165926799|ref|ZP_02222631.1| alanine racemase [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165936464|ref|ZP_02225032.1| alanine racemase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166010502|ref|ZP_02231400.1| alanine racemase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213905|ref|ZP_02239940.1| alanine racemase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402467|ref|ZP_02307924.1| alanine racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167419354|ref|ZP_02311107.1| alanine racemase [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426158|ref|ZP_02317911.1| alanine racemase [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167470981|ref|ZP_02335685.1| alanine racemase [Yersinia pestis FV-1]
 gi|218927526|ref|YP_002345401.1| alanine racemase [Yersinia pestis CO92]
 gi|229836578|ref|ZP_04456744.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           Pestoides A]
 gi|229840186|ref|ZP_04460345.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842268|ref|ZP_04462423.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229903994|ref|ZP_04519107.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           Nepal516]
 gi|270489020|ref|ZP_06206094.1| alanine racemase [Yersinia pestis KIM D27]
 gi|294502386|ref|YP_003566448.1| alanine racemase [Yersinia pestis Z176003]
 gi|20137380|sp|Q8ZJ10|ALR1_YERPE RecName: Full=Alanine racemase 1
 gi|226711068|sp|A9QYT2|ALR_YERPG RecName: Full=Alanine racemase
 gi|21957285|gb|AAM84166.1|AE013660_1 alanine racemase 1 [Yersinia pestis KIM 10]
 gi|45435186|gb|AAS60746.1| alanine racemase (biosynthetic) [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108777157|gb|ABG19676.1| alanine racemase (biosynthetic) [Yersinia pestis Nepal516]
 gi|108781867|gb|ABG15925.1| alanine racemase (biosynthetic) [Yersinia pestis Antiqua]
 gi|115346137|emb|CAL19005.1| alanine racemase (biosynthetic) [Yersinia pestis CO92]
 gi|145212594|gb|ABP42001.1| alanine racemase (biosynthetic) [Yersinia pestis Pestoides F]
 gi|149290041|gb|EDM40118.1| alanine racemase (biosynthetic) [Yersinia pestis CA88-4125]
 gi|162353116|gb|ABX87064.1| alanine racemase [Yersinia pestis Angola]
 gi|165915580|gb|EDR34189.1| alanine racemase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165921422|gb|EDR38646.1| alanine racemase [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165990592|gb|EDR42893.1| alanine racemase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204880|gb|EDR49360.1| alanine racemase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166963348|gb|EDR59369.1| alanine racemase [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167048155|gb|EDR59563.1| alanine racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054869|gb|EDR64671.1| alanine racemase [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229679764|gb|EEO75867.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           Nepal516]
 gi|229690578|gb|EEO82632.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229696552|gb|EEO86599.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229706262|gb|EEO92270.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           Pestoides A]
 gi|262360469|gb|ACY57190.1| alanine racemase [Yersinia pestis D106004]
 gi|262364415|gb|ACY60972.1| alanine racemase [Yersinia pestis D182038]
 gi|270337524|gb|EFA48301.1| alanine racemase [Yersinia pestis KIM D27]
 gi|294352845|gb|ADE63186.1| alanine racemase [Yersinia pestis Z176003]
 gi|320013815|gb|ADV97386.1| alanine racemase 1, PLP-binding, biosynthetic [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 359

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G    A  L +     + V  + 
Sbjct: 4   ATAVIDRHALRHNLQQIRRLAPQSRLVAVVKANAYGHGLLAAAHTLQD--ADCYGVARIS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +  +        +
Sbjct: 62  EALMLRAGGIVKPILLLEGFFDAEDLPVLVANHIETAVHSLEQLVALEAATLSAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   +A  F    S  + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPDQAEAFYQRLSACRNVIQPVNIMSHFSRADEPEVAATQQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARI 242
            +   G + S+A+S GIL  P  H    RPGI LYG +       +   +   +T ++ +
Sbjct: 182 AAGKPG-KQSIAASGGILRWPQAHRDWVRPGIVLYGVSPFDAPYGRDFGLLPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGESVGYGGTWVSERDTRLGVIAIGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD   ++G ++ ++ VA  +G + Y+L+  + 
Sbjct: 290 NGREVSIVGRVSMDMISIDLGPESTDKVGDEALMWGAELPVERVAACTGISAYELITNLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|229017415|ref|ZP_04174318.1| Alanine racemase [Bacillus cereus AH1273]
 gi|228743978|gb|EEL94077.1| Alanine racemase [Bacillus cereus AH1273]
          Length = 408

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 162/376 (43%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AG+    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKRVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGINQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        +     +++  +  +  L   +++ +         
Sbjct: 88  EAIELREAGITVPILILGYTSVAAVEDAIQYDVMMTVYRIEDLQSINEIANRLQKKVQIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADETDKAYTNMQTSLFEKA 207

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++              ++S+G +   N    + R GI +YG        H    ++  ++
Sbjct: 208 VNTAKELGIHFPYIHSSNSAGSMELSNTFQNMVRVGIGIYGMYPSKEVDHTVVALKPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHAKKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M DIT ++ ++VGD +  +G      I +++VA   GT 
Sbjct: 317 GHALINGVRVPVIGRVCMDQLMLDITKAMPVQVGDEVVFYGKQGEEEIAVEEVADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|297624657|ref|YP_003706091.1| alanine racemase [Truepera radiovictrix DSM 17093]
 gi|297165837|gb|ADI15548.1| alanine racemase [Truepera radiovictrix DSM 17093]
          Length = 374

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 108/372 (29%), Positives = 168/372 (45%), Gaps = 21/372 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
              +I L AL  N  S+ A +  A+    VK NAYG G  ++A  L   GV  F V + +
Sbjct: 8   PHAEISLRALARNLASLRART-RAQLLVPVKANAYGHGAPEVARQLERLGVPWFGVATAD 66

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR     A I +   ++ G  + +    +   +          +           L
Sbjct: 67  EALELRGAGISADILIFGPVYEG-LEALIAQGVALSVVDARSAEAVVRAAGSVPGARVHL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG  RLG  L   L         +   L  + +HLA AD+P S    VQL RF   +
Sbjct: 126 KTDTGMGRLGEPLAATLKTAERLSRARGVTLEGLWTHLAAADEPDSSFTQVQLARFSDTL 185

Query: 187 S--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTA 238
           +     GI   L  ++        P  HF L RPGI++YG          +  +  V+T 
Sbjct: 186 AALGRAGITVPLKHAANSAALFAHPASHFDLVRPGIAVYGYHASPFIAALAPELTPVMTL 245

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A +  +++  AG  +SYGG  +  RD+ +A    GYADGYP  LS              
Sbjct: 246 SAPVTFVKRVAAGTPISYGGLWRAPRDTTVATVRFGYADGYPRGLS---------ATPHA 296

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDL 357
           +  ++G + PI+G++ MD  M D+ D  ++ VG+   +FGP+    +D+A   GT +Y+L
Sbjct: 297 RVRLQGRLCPIVGRVCMDQLMVDVGDL-TVTVGERAVLFGPEGPTAEDLAGGVGTISYEL 355

Query: 358 LVRIGTRYAKFY 369
           L ++G R A+ Y
Sbjct: 356 LTQLGRRVARSY 367


>gi|300859953|ref|ZP_07106041.1| alanine racemase [Enterococcus faecalis TUSoD Ef11]
 gi|300850771|gb|EFK78520.1| alanine racemase [Enterococcus faecalis TUSoD Ef11]
 gi|315145182|gb|EFT89198.1| alanine racemase [Enterococcus faecalis TX2141]
 gi|315163090|gb|EFU07107.1| alanine racemase [Enterococcus faecalis TX0645]
          Length = 371

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 146/379 (38%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF--YSKLMSCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L             
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEATLQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|238794660|ref|ZP_04638266.1| Alanine racemase 1 [Yersinia intermedia ATCC 29909]
 gi|238726049|gb|EEQ17597.1| Alanine racemase 1 [Yersinia intermedia ATCC 29909]
          Length = 359

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPILVANRIETAVHSIEQLEALEAADLPAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F       + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPEQADAFYQRLCACRNVIQPVNIMSHFSRADEPEVETTHQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
                G + S+A+S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 AIGKPG-KQSIAASGGILLWPQAHRDWVRPGIILYGVSPMDEPYASHFDLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG      D+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWVSEHDTRLGVVAIGYGDGYPRSA-----------PSGTPMWV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+  + S +VGD + ++G D+ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVCIVGRVSMDMISVDLGPNSSDKVGDEVLLWGADLPVEKIAAYTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|238782924|ref|ZP_04626952.1| Alanine racemase 1 [Yersinia bercovieri ATCC 43970]
 gi|238716127|gb|EEQ08111.1| Alanine racemase 1 [Yersinia bercovieri ATCC 43970]
          Length = 359

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 167/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     +           +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPILVANRIETAIHSIEQLEALEAADLPAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  + A       S  + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPEHAPALYQRLSTCRNVIQPVNIMSHFSRADEPQVETTRQQLSCFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G + S+A+S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 AADKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPLDEPYASHFNLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWISERDTRLGVVAIGYGDGYPRSA-----------PSGTPMWV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+      +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVCIVGRVSMDMISVDLGPDAHDKVGDEVLLWGAELPVERIAACTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|241662911|ref|YP_002981271.1| alanine racemase [Ralstonia pickettii 12D]
 gi|240864938|gb|ACS62599.1| alanine racemase [Ralstonia pickettii 12D]
          Length = 374

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 98/367 (26%), Positives = 151/367 (41%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + N+R  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQVARRHAPNSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    I+    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLAIVEQFRLTTTVHCEEQLRMLELARPKG-PIS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGVGTIVHMTHFSDADGPRGI--EHQLVAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL +S+  L  P  H    RPG+ +YG +            +   +T +
Sbjct: 178 QATQGLPG-EASLCNSAATLWHPKAHRDWVRPGVIMYGASPTGVAADIDGTGLMPAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG +  +     I + A GYADGYP    G D  H         
Sbjct: 237 SELIAIQDLQPGATIGYGSRFTVEHPMRIGIVACGYADGYPRHAPGWDGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+       VG  + ++G  + +DDVA ASGT  Y+L+ 
Sbjct: 290 VLVDGVRTHIVGRVSMDMITVDLAGVPEARVGTPVTLWGEGLPIDDVAHASGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|124004631|ref|ZP_01689475.1| Mur ligase domain protein/alanine racemase [Microscilla marina ATCC
           23134]
 gi|123989754|gb|EAY29283.1| Mur ligase domain protein/alanine racemase [Microscilla marina ATCC
           23134]
          Length = 833

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/376 (25%), Positives = 150/376 (39%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L  + +   +VK  AYG G  +IA  L    V    V   +E
Sbjct: 466 LEINLGALVHNLNFYREQLPSHTKMMVMVKAFAYGSGSAEIAHLLQFHRVDYLGVAYADE 525

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV LR       I V+       +K++       + S      F   L     +    L+
Sbjct: 526 GVFLRESGIDLPIMVMNPSEDTFDKLLQYDLEPEMYSFKVLDEFIHFLKEQQTTAKVHLK 585

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--------IISHLACADD-PSSHVNSVQ 178
           +DTG +RLG  ++E              Q +         + SHLA +D+   +  +  Q
Sbjct: 586 IDTGMHRLGFVVEEVPRLLQVLQQPDTQQKAPLDYLSIASVFSHLAGSDEATHNAYSQQQ 645

Query: 179 LERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
           +  F              +   + +S GI+  P   F + R GI LYG          +Q
Sbjct: 646 ITLFEAATKQIETALGYEVIKHILNSPGIVRFPEASFDMVRLGIGLYGIEANQIAQSQLQ 705

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
           ++      I  I+    GE V Y  +   +  +  A  AIGYADG+    S         
Sbjct: 706 SISRLTTTISQIKYLQPGETVGYSRKGVASHTTKTATVAIGYADGFSRAFSNGV------ 759

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
               GK  + G  VP++G + MDM M D+T       GD + IF  ++ + D+A +  T 
Sbjct: 760 ----GKVMVNGAKVPVIGNVCMDMCMIDVTGV-EATEGDEVIIFNEELSILDLAQSIDTI 814

Query: 354 NYDLLVRIGTRYAKFY 369
            Y++L  I  R  + +
Sbjct: 815 PYEILTNISQRVKRVF 830


>gi|260061407|ref|YP_003194487.1| Mur ligase domain-containing protein/alanine racemase
           [Robiginitalea biformata HTCC2501]
 gi|88785539|gb|EAR16708.1| Mur ligase domain protein/alanine racemase [Robiginitalea biformata
           HTCC2501]
          Length = 370

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 150/375 (40%), Gaps = 19/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +    L+IDL AL +N+  +   L    R   VVK   YG     IA  L   G   
Sbjct: 1   MPQSRDTVLEIDLGALAHNYRFLRDRLRPETRFLGVVKAYGYGSDSLAIALKLEALGADY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSC 118
             V   +EG  LR    +  I VL+    G + +I       + S      F        
Sbjct: 61  LAVAFTDEGTFLREGGVRLPILVLHPQPSGLDDLITHRLEPALYSLRILKMFLETARRRE 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSV 177
               P  L+ +TG NRLG    +          +    +    SHLA +DDP S+     
Sbjct: 121 ARGFPVHLKFNTGLNRLGFWENDVEWIAGQLEGESSLTIRSAFSHLAASDDPGSNTFTQR 180

Query: 178 QLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q++ F  +++  +          L ++SGIL  P+  + + R GI LYG  +       +
Sbjct: 181 QIKSFAAIVADIREQLPGTPFFHLLNTSGILNFPDAQWDMVRSGIGLYGYGNDPEVDPLL 240

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V     RI  + K   GE V Y    +       A   IG+ADG              
Sbjct: 241 RPVARLRTRISQLHKIEPGEWVGYNKGYRAADFRTTATLPIGHADGIGRIYG-------- 292

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                G   ++G   PI+G + MDMTM D+T     + GD + +FG     +D+A  +GT
Sbjct: 293 --KEHGAFHVRGKRAPIIGNVCMDMTMIDVTGIP-CKEGDEVVVFGNGHSAEDLARGAGT 349

Query: 353 TNYDLLVRIGTRYAK 367
            +Y+LL  I  R A+
Sbjct: 350 ISYELLTGISRRVAR 364


>gi|170026067|ref|YP_001722572.1| alanine racemase [Yersinia pseudotuberculosis YPIII]
 gi|169752601|gb|ACA70119.1| alanine racemase [Yersinia pseudotuberculosis YPIII]
          Length = 359

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G    A  L +     + V  + 
Sbjct: 4   ATAVIDRHALRHNLQQIRRLAPQSRLVAVVKANAYGHGLLAAAHTLQD--ADCYGVARIS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +  +        +
Sbjct: 62  EALMLRAGGIVKPILLLEGFFDAEDLPVLVANHIETAVHSLEQLVALEAATLSAPINAWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   +A  F    S  + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPDQAEAFYQRLSACRNVIQPVNIMSHFSRADEPEVAATQQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARI 242
            +   G + S+A+S GIL  P  H    RPGI LYG +       +   +   +T ++ +
Sbjct: 182 AAGKPG-KQSIAASGGILRWPQAHRDWVRPGIVLYGVSPFDAPYGRDFGLLPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGESVGYGGTWVSERDTRLGVIAIGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD   ++G ++ ++ VA  +G + Y+L+  + 
Sbjct: 290 NGREVSIVGRVSMDMISIDLGPESTDKVGDEALMWGAELPVERVAACTGISAYELITNLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|167839235|ref|ZP_02465962.1| alanine racemase [Burkholderia thailandensis MSMB43]
          Length = 374

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + ++R  +VVK NAYG G E+I PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPSSRVWSVVKANAYGHGIERIYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +    D   + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFDAADVETADRYRLTVAVHGDEPLKLLTSSKTARPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A ADD        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPDAFRAAWERAATAPSIGRIALMMHFANADDGE---IDWQMSMFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGATRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG +    R   I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLSPGETVGYGRRFAAGRAMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSTVELWGEQVRVDDVAQAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|290475457|ref|YP_003468345.1| alanine racemase 2, PLP-binding, catabolic [Xenorhabdus bovienii
           SS-2004]
 gi|289174778|emb|CBJ81579.1| alanine racemase 2, PLP-binding, catabolic [Xenorhabdus bovienii
           SS-2004]
          Length = 355

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L A ++N   +    G+++  +VVK NAYG G ++I  +L       F +  
Sbjct: 3   RPILATIHLDAFRHNLAVIRQKVGDSKIWSVVKANAYGHGLDRIWQSLMQ--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR +  Q  I +L G     +  + D   +             +          
Sbjct: 61  MNEAIYLREHGWQGPILLLEGFFKLSDLQLIDQYGLTTTVHSYWQLKAIEEARLNNPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + +E       +   K  +   +++H A +D+        Q      
Sbjct: 121 YLKINSGMNRLGFTPEEYSQVVSMANCIKNIKSVTLMTHFANSDNEIGI--DEQFAVVEC 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
           L      +   LA+S  +L  P  H    RPGI LYG +            ++  ++  +
Sbjct: 179 L--KMDLLPRCLANSGAVLWHPKTHGDWVRPGIILYGASPSGKWRDIADVGLKPAMSLHS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II +     G  + YG +      + I   A GYADGYP   S            G   
Sbjct: 237 EIIAVHDLPKGAKIGYGSRYTTQYPTRIGTVACGYADGYPRHAS-----------TGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG I+MDM   D+T     E+G  ++++G ++ +D+VA ++GT  Y+LL  
Sbjct: 286 LVGGVRTQLLGAISMDMMTVDLTPCPQTEIGSTVELWGENLPVDEVAESAGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LAIRVP 351


>gi|229015244|ref|ZP_04172279.1| Alanine racemase [Bacillus mycoides DSM 2048]
 gi|228746046|gb|EEL96014.1| Alanine racemase [Bacillus mycoides DSM 2048]
          Length = 340

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 102/350 (29%), Positives = 154/350 (44%), Gaps = 24/350 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            A VK N YG G  +++    N+GV    V S+EE +KLR    QA I +L    P    
Sbjct: 1   MATVKANGYGHGAVEVSKKAINSGVDYLAVASLEEAIKLRKSDIQAPILILGYTPPSAAN 60

Query: 93  IIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +   +L   I  +      S      G      ++VDTG  RLGL  +EA DF H    
Sbjct: 61  HVVYWDLTQSIFDIEHAEALSTSGQILGKKAKVHVKVDTGMGRLGLQAEEASDFIHIVSR 120

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIE-----ASLASSSGILLGP 206
                L  + SH A AD+        Q  R++ L+   +  +       +A+S+  +  P
Sbjct: 121 MDGLYLEGVYSHFATADEADKRYAEKQKNRWKRLLEELEKRKVSIPLFHIANSAATIEMP 180

Query: 207 NYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
           +  + + R GIS+YG       +     ++  +  + ++I I+    G  VSYG      
Sbjct: 181 DMTYDMVRIGISMYGLYPSKEVNKTKVNLRQAIQLKTKVIYIQTLEKGYGVSYGATNIER 240

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
             ++IA   IGYADGY   LSG                I G + P+ GKI MD  M D+T
Sbjct: 241 DKAIIATIPIGYADGYSRRLSGT-----------AYVLIHGQLAPVFGKICMDFCMIDVT 289

Query: 324 DSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D   + +GD + ++G      I LD+VA   GT +Y++   +G R  + Y
Sbjct: 290 DIKGVNIGDEVVVYGGQGDYFISLDEVASMLGTISYEVACNLGQRVPRIY 339


>gi|228919176|ref|ZP_04082550.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228840487|gb|EEM85754.1| Alanine racemase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 389

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    +L 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIELW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A +D+  +   
Sbjct: 121 DGSPVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATSDEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++  L  ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKLVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|152970855|ref|YP_001335964.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238895366|ref|YP_002920101.1| alanine racemase [Klebsiella pneumoniae NTUH-K2044]
 gi|150955704|gb|ABR77734.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|238547683|dbj|BAH64034.1| alanine racemase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 356

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AVVK NAYG G  ++  AL       F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSALSA--ADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +             +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    GE + YGG  + T++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQNLRPGEAIGYGGLYRTTQEQRIGIVACGYADGYPR-----------VAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|19551822|ref|NP_599824.1| alanine racemase [Corynebacterium glutamicum ATCC 13032]
 gi|62389477|ref|YP_224879.1| alanine racemase [Corynebacterium glutamicum ATCC 13032]
 gi|23813648|sp|Q8RSU9|ALR_CORGL RecName: Full=Alanine racemase
 gi|158428171|pdb|2DY3|A Chain A, Crystal Structure Of Alanine Racemase From Corynebacterium
           Glutamicum
 gi|158428172|pdb|2DY3|B Chain B, Crystal Structure Of Alanine Racemase From Corynebacterium
           Glutamicum
 gi|158428173|pdb|2DY3|C Chain C, Crystal Structure Of Alanine Racemase From Corynebacterium
           Glutamicum
 gi|158428174|pdb|2DY3|D Chain D, Crystal Structure Of Alanine Racemase From Corynebacterium
           Glutamicum
 gi|18699004|gb|AAL77207.1| alanine racemase [Corynebacterium glutamicum]
 gi|21323353|dbj|BAB97981.1| Alanine racemase [Corynebacterium glutamicum ATCC 13032]
 gi|41324811|emb|CAF19293.1| ALANINE RACEMASE [Corynebacterium glutamicum ATCC 13032]
          Length = 361

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 162/372 (43%), Gaps = 20/372 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  KIDL A+ +N   +  ++G A+  AVVK NAY  G EK+AP +   G   F V +
Sbjct: 2   NLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNHGVEKVAPVIAAHGADAFGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E ++LR       +           +   D N+   + S         + +       
Sbjct: 62  LAEAMQLRDIGISQEVLCWIWTPEQDFRAAIDRNIDLAVISPAHAKAL--IETDAEHIRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           ++++D+G +R G+  QE              +++ + +HLACAD+P +     Q+  FR 
Sbjct: 120 SIKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTHLACADEPENPETDRQIIAFRR 179

Query: 185 --LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              ++   G+E     + +S   L   + H ++ RPG++ YG        H ++  +T E
Sbjct: 180 ALALARKHGLECPVNHVCNSPAFLTRSDLHMEMVRPGLAFYGLEPVAGLEHGLKPAMTWE 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A++ ++++  AG+  SYG   +      +AV   GYADG P    G  S           
Sbjct: 240 AKVSVVKQIEAGQGTSYGLTWRAEDRGFVAVVPAGYADGMPRHAQGKFS----------- 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD-IKLDDVALASGTTNYDL 357
             I G   P +G++ MD  +  + D+   +E G    IFG +     D A    T NY++
Sbjct: 289 VTIDGLDYPQVGRVCMDQFVISLGDNPHGVEAGAKAVIFGENGHDATDFAERLDTINYEV 348

Query: 358 LVRIGTRYAKFY 369
           + R   R  + Y
Sbjct: 349 VCRPTGRTVRAY 360


>gi|265755008|ref|ZP_06089922.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263234619|gb|EEZ20198.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 821

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+     +  T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQIINNVS--TLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKASYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|227528902|ref|ZP_03958951.1| alanine racemase [Lactobacillus vaginalis ATCC 49540]
 gi|227351176|gb|EEJ41467.1| alanine racemase [Lactobacillus vaginalis ATCC 49540]
          Length = 374

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/387 (23%), Positives = 154/387 (39%), Gaps = 31/387 (8%)

Query: 1   MHSNEF--LRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S      +L +DL A+K+N H    +L+ N++  AVVK NAYG G   +A     AG 
Sbjct: 1   MISGRLRDTKLIVDLGAIKHNIHEQQKSLAPNSKILAVVKANAYGNGLVPVAQTAIKAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSK 114
               V  ++E ++LR     + I VL         I  +  +   + S+         + 
Sbjct: 61  TGTCVAILDEALELRDSGITSLILVLGITPVENAHIAAEAGVSLTVGSLDWLEDYHQLAI 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                      L +D+G  R+G +  E   +           +   + +H A AD     
Sbjct: 121 ANHWTKPLKVHLGIDSGMGRIGFTTVESFNEAVKFVREHHEFEFEGMFTHFATADSADDS 180

Query: 174 VNSVQLERFRTLISHYKGIEASLA--SSSGILLGPN-YHFQLTRPGISLYGGTD---KIN 227
             + Q+ ++   +S    +   +   +S+  +           R GIS+YG      ++ 
Sbjct: 181 YFNKQVNKWEQFVSSLTELPPFVHMANSATGMWHREKITANTVRMGISMYGQNPSGRELA 240

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            +  +Q V      I  ++K  AGE VSYG       D  +A   IGYADGYP  ++G  
Sbjct: 241 ATLDLQPVEQLVTSISFVKKLKAGESVSYGATYTAQEDEWLATLPIGYADGYPRCMTGY- 299

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKL 343
                      K  + G    I G++ MD  M  +     +  G  + + G     +I  
Sbjct: 300 -----------KVLVDGQFCDIAGRVCMDQMMIRLPKPYPV--GTQVVLMGRSGNKEITA 346

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFYT 370
           +D+A  + T NY+++  I  R  + YT
Sbjct: 347 NDLADRADTINYEIMTNISNRVHRVYT 373


>gi|212693805|ref|ZP_03301933.1| hypothetical protein BACDOR_03326 [Bacteroides dorei DSM 17855]
 gi|212663694|gb|EEB24268.1| hypothetical protein BACDOR_03326 [Bacteroides dorei DSM 17855]
          Length = 821

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+     +  T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQIINNVS--TLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKASYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|327193285|gb|EGE60191.1| alanine racemase protein [Rhizobium etli CNPAF512]
          Length = 377

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 195/365 (53%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E 
Sbjct: 23  LTIDLAALGRNYLKLASMLAPVRAGAVVKADAYGLGAERVAQTLYDQGCRHFFVAQFVEA 82

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V+LR      A+IFVL G+ PG E    ++ +IPV++S+ Q   +S        S P  L
Sbjct: 83  VRLRPALAEDAQIFVLNGLQPGNEVACAESGIIPVLNSLAQWRQWSATARLLTRSLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +      +    ++  I+SHLACAD+  S  N  QL     + 
Sbjct: 143 QFDTGMSRLGFPWEERAELAAVIGDGANVEILFIMSHLACADELDSGQNGDQLAEMARIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG      ++PM+ VV  +  ++  R
Sbjct: 203 DEFPGFDISFANSGGLFLGDAYHGVLARPGIALYGGAPNAGGTNPMEPVVRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              +G  + YGG     R++ +A  A GYADG P +L              G  + KG  
Sbjct: 263 TVPSGARIGYGGAHVTRRETRLATIAAGYADGLPRSLGDC-----------GAVYHKGIR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DIT      + +G  +++ GP+  L+DVA A+GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDITALPEGALRLGSLVEVLGPNQTLEDVAGAAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YDRQY 376


>gi|228907651|ref|ZP_04071508.1| Alanine racemase [Bacillus thuringiensis IBL 200]
 gi|228852143|gb|EEM96940.1| Alanine racemase [Bacillus thuringiensis IBL 200]
          Length = 340

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 155/350 (44%), Gaps = 24/350 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            A VK N YG G  +++    N+GV    V S+EE +KLR    QA I +L    P    
Sbjct: 1   MATVKANGYGHGAVEVSKKAINSGVDYLAVASLEEAIKLRKSDIQAPILMLGYTPPSAAN 60

Query: 93  IIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +   +L   I  +      SK     G      ++VDTG  RLGL  +EA DF H    
Sbjct: 61  HVVYWDLTQSIFDIEHAEALSKSGQILGKKAKVHVKVDTGMGRLGLQAEEANDFIHIVSR 120

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIE-----ASLASSSGILLGP 206
                L  + SH A AD+        Q  R++ L+   +  +       +A+S+  +  P
Sbjct: 121 MDGLYLEGVYSHFATADEADKRYAEKQKNRWKRLLEELEKRKVSIPLFHIANSAATIEMP 180

Query: 207 NYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
           +  + + R GIS+YG       +     ++  +  + ++I I+    G  VSYG      
Sbjct: 181 DMTYDMVRIGISMYGLYPSKEVNKTKVNLKQAIQLKTKVIYIQTLEKGYGVSYGATNIER 240

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
             ++IA   IGYADGY   LSG                I G + PI GKI MD  M D+T
Sbjct: 241 DKAIIATIPIGYADGYSRRLSGT-----------AYVLIHGQLAPIFGKICMDFCMIDVT 289

Query: 324 DSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D   + +GD + ++G      I LD+VA   GT +Y++   +G R  + Y
Sbjct: 290 DIKGVNIGDEVVVYGGQGDYFISLDEVASMLGTISYEVACNLGQRVPRIY 339


>gi|291482873|dbj|BAI83948.1| D-alanine racemase [Bacillus subtilis subsp. natto BEST195]
          Length = 389

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 103/384 (26%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +  F R    +IDL+A+K N  +M    G +    AVVK NAYG G  + A A  +AG
Sbjct: 1   MSTKPFYRDTWAEIDLSAIKENVSNMKKHIGEHVHLMAVVKANAYGHGDAETAKAALDAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR    +A I VL  + P    I  + ++     SV  L   ++  
Sbjct: 61  ASCLAVAILDEAISLRKKGLKAPILVLGAVPPEYVAIAAEYDVTLTGYSVEWLQEAARHT 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVN 175
             G    + L+VDTG NRLG+  +E +       ++    +   + +H A AD+      
Sbjct: 121 KKGY-LHFHLKVDTGMNRLGVKTEEEVQNVMAILDRNPRLKCKGVFTHFATADEKERGYF 179

Query: 176 SVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            +Q ERF+ LI+      +    A+S+  L      F   R GI +YG     + S  + 
Sbjct: 180 LMQFERFKELIAPLPLKNLMVHCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADISDEIP 239

Query: 234 TVV----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++    GE VSYG +    +D+ I    +GYADG+   L G D  
Sbjct: 240 FQLRPAFTLHSTLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLKGTDI- 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       +KG  + I G+I MD  M ++        G  + + G      I +D+
Sbjct: 299 -----------LVKGKRLKIAGRICMDQFMVELDQEYP--PGTKVTLIGRQGDEYISMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IAGRLETINYEVACTISSRVPRMF 369


>gi|153948196|ref|YP_001402718.1| alanine racemase [Yersinia pseudotuberculosis IP 31758]
 gi|152959691|gb|ABS47152.1| alanine racemase [Yersinia pseudotuberculosis IP 31758]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 167/367 (45%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  L+  +R  AVVK NAYG G    A  L +     + V  + 
Sbjct: 4   ATAVIDRHALRHNLQQIRRLAPQSRLVAVVKANAYGHGLLAAAHTLQD--ADCYGVARIS 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +           +
Sbjct: 62  EALMLRAGGIVKPILLLEGFFDAEDLPVLVANHIETAVHSLEQLVALEAARLSAPINAWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+   +A  F    S  + + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPDQAEAFYQRLSACRNVIQPVNIMSHFSRADEPEVAATQQQLACFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARI 242
            +   G + S+A+S GIL  P  H    RPGI LYG +       +   +   +T ++ +
Sbjct: 182 AAGKPG-KQSIAASGGILRWPQAHRDWVRPGIVLYGVSPFDAPYGRDFGLLPAMTLKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGESVGYGGTWVSERDTRLGVIAIGYGDGYPRSA-----------PSGTPVWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+    + +VGD   ++G ++ ++ VA  +G + Y+L+  + 
Sbjct: 290 NGREVSIVGRVSMDMISIDLGPESTDKVGDEALMWGAELPVERVAACTGISAYELITNLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|313634120|gb|EFS00784.1| alanine racemase [Listeria seeligeri FSL N1-067]
          Length = 371

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 148/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID +A++ N       L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 9   HRPTWIEIDRSAIRENIKNEQKKLPKNVAVWAVVKANAYGHGIIEVAKTAKEAGAKGFCV 68

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       +   +      
Sbjct: 69  AILDEALALREAGFQDDFILVLGATRKEDANLAAHNNI---SLTIFREDWLDGVHLETPL 125

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++D+G  RLG+   +EA           +  L    +H A AD   +     QL +
Sbjct: 126 KVHLKIDSGMGRLGIRSAEEAEQIEAKIVQTDMFFLEGAYTHFATADQLETSYFEQQLAK 185

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F  ++   K     +   +S+  LL     F   R GIS+YG    I    N    ++  
Sbjct: 186 FDAILKGLKSRPRFVHAANSAAALLQSQIGFDAVRFGISMYGLAPSIEIKSNLPFKLKPA 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ ++K   G+ VSYG     T    IA   IGYADG     SG          
Sbjct: 246 LALYTEMVHVKKLAPGDSVSYGATYTATEREWIATLPIGYADGLIRHYSGF--------- 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASG 351
              +  + G   PI+G++ MD T+  +      + G  + I     G  +  DD A    
Sbjct: 297 ---QVLVDGKKAPIIGRVCMDQTIIKLP--YEFQTGTKVTIIGMDHGNSVTADDAAKYLD 351

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 352 TINYEVTCLLTERIPRKY 369


>gi|284037156|ref|YP_003387086.1| alanine racemase [Spirosoma linguale DSM 74]
 gi|283816449|gb|ADB38287.1| alanine racemase [Spirosoma linguale DSM 74]
          Length = 835

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 165/382 (43%), Gaps = 33/382 (8%)

Query: 9   LKIDLTALKNNWHSMNAL------SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           L+I+L AL +N +               +   +VK  AYG G  ++A  L    V    V
Sbjct: 461 LEINLDALTHNLNYYRERISRNDGPSETKIMVMVKAFAYGSGSAEVAQLLQFHRVDYLAV 520

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--- 119
              +EGV LR       I V+    P     + +  L P I S+  L  + + +      
Sbjct: 521 AYADEGVSLRQNGVDLPIMVMNPA-PETFSTLLEYKLEPEIYSLRLLREWEEFLRSREHA 579

Query: 120 ------VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSS 172
                  ++P  L++DTG +RLG   +E    T     +    ++ + SHL  ADD   +
Sbjct: 580 FANTQSTTYPIHLKIDTGMHRLGFLERELTVVTDFLKRQPNLHVATVFSHLVGADDAQFN 639

Query: 173 HVNSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
             +  Q E F                  L +S+GI+  P+Y   + R GI LYG      
Sbjct: 640 PFSRQQYETFLRCTEFLGAELGYMPTRHLLNSAGIVRFPDYKLDMVRLGIGLYGVEATGT 699

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   +QTV T    +  I+   AGE V Y  +  L  D+ IA  AIGYADGY   L    
Sbjct: 700 EQSALQTVGTLRTIVSQIKTVGAGESVGYSRRGVLDHDARIATLAIGYADGYDRRLGNGV 759

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVA 347
                     G  ++ G   P +G + MDMTM D+T++ S+  GD + IFGP++ + ++A
Sbjct: 760 ----------GNVWVNGSYCPTVGSVCMDMTMIDVTNA-SVSEGDEVLIFGPELPITELA 808

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT  Y++L  +  R  + +
Sbjct: 809 RRIGTIPYEILTGVSERVKRVF 830


>gi|182414552|ref|YP_001819618.1| alanine racemase [Opitutus terrae PB90-1]
 gi|177841766|gb|ACB76018.1| alanine racemase [Opitutus terrae PB90-1]
          Length = 382

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 164/377 (43%), Gaps = 28/377 (7%)

Query: 8   RLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +IDL AL+ N   +  +L  + R  AVVK +AYG G  + A  L +AG   F V ++ 
Sbjct: 13  WAEIDLAALERNLRLIRASLPAHMRYVAVVKADAYGHGLPQTAARLMHAGADLFAVATLA 72

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYA 125
           E   +R   P   + +L  + P +++ + + +L   +SS+ ++  +       G      
Sbjct: 73  EAATVRELGPGWPVLLLSPLLPEEDRYLAEYDLTATVSSIEEVDRFEAAGRVAGRVISVH 132

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L++DTG  RLG+  ++      +       +L+ + +H A  ++  +   S Q  RF   
Sbjct: 133 LKIDTGMGRLGVWHEQTASVYEHLARAPHLRLAGVFTHFAAPEE--AAFTSEQRRRFLAA 190

Query: 186 ISHYKGIEASL------ASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVV 236
           ++  +GI           S+    +     F   R G+  +G     N        + V 
Sbjct: 191 LAACQGIPLDSIFVHADNSAGIETMSSATPFNAVRIGLLQFGILPHPNSLLSEVHTEPVF 250

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +   R+ L++   AG  +SYG    L R + IA+   GY DG P  +S            
Sbjct: 251 SFLTRVGLVKSLPAGYTISYGRTYTLGRPTRIAILCAGYGDGIPRAVSNR---------- 300

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGT 352
             +  I+G   P+LG++TMD T+ DITD+  +  GD   I G     +I + + +  + T
Sbjct: 301 -AQVLIRGTRCPVLGRVTMDQTIVDITDAGDVRCGDEAVIVGRQDQAEISIAEFSTWADT 359

Query: 353 TNYDLLVRIGTRYAKFY 369
             ++ L  I  R  + Y
Sbjct: 360 IPWETLCSITKRVPRVY 376


>gi|332163185|ref|YP_004299762.1| alanine racemase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318603930|emb|CBY25428.1| alanine racemase, biosynthetic [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667415|gb|ADZ44059.1| alanine racemase [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330861935|emb|CBX72104.1| alanine racemase [Yersinia enterocolitica W22703]
          Length = 359

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 104/367 (28%), Positives = 174/367 (47%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRIAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     ++          +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPILAANCIETAVHSIEQLEALEVAELSAPIHVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  K + Q   I+SH + AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACKNVIQPVNIMSHFSRADEPQVDTTRQQLDCFDTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G + S+A+S GILL P  H    RPGI LYG +           ++  +  ++ +
Sbjct: 182 AADKPG-KQSIAASGGILLWPEAHRDWVRPGIILYGVSPMDEPYASHFELKPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWVSERDTRLGVVAIGYGDGYPRSA-----------PSGTPMWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
               V I+G+++MDM   D+  + + +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NDREVGIVGRVSMDMISVDLGPNATDKVGDEVLLWGAELPVEKIAACTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|260598252|ref|YP_003210823.1| alanine racemase [Cronobacter turicensis z3032]
 gi|260217429|emb|CBA31526.1| Alanine racemase, catabolic [Cronobacter turicensis z3032]
          Length = 356

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 158/368 (42%), Gaps = 22/368 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFV 62
           +  ++  +DL AL++N   +   +  +R  +VVK NAYG G +++  AL   G    F +
Sbjct: 2   SRPIQASLDLQALRHNLEVVRRAAPRSRVWSVVKANAYGHGLDRVWSAL---GATDGFAM 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++EE + LR    +  I +L G     E  +FD   +                      
Sbjct: 59  LNLEEAILLRERGWKGPILMLEGFFHADELPLFDKYRLTTSVHSNWQLKALAGAKLNAPL 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++++G NRLG + +                   +++H A AD P     ++     
Sbjct: 119 DVYLKINSGMNRLGFTPERVHSIWQQLKAIANVGQITLMAHFADADRPDGIDAAMVRI-- 176

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTA 238
               +       SL++S+  L  P  HF   RPGI LYG +         +  +Q V+T 
Sbjct: 177 -EQAAEGIDAPRSLSNSAAALWHPQAHFDWVRPGIVLYGASPSGQWRDIATSGLQPVMTL 235

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++ II ++    G+ V YG + +   +  I + A GYADGYP                G 
Sbjct: 236 KSEIIGVQTLKPGDTVGYGSRYRAMGEQRIGIVACGYADGYPRHA-----------PDGA 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G    I+G ++MDM   D+T      +G  ++++G +IK+DDVA A GT  Y+L+
Sbjct: 285 PVLVDGVRTGIIGTVSMDMLTVDLTPCPQAGIGSPVELWGNEIKIDDVAAACGTVGYELM 344

Query: 359 VRIGTRYA 366
             +  R  
Sbjct: 345 CALAPRVP 352


>gi|229546693|ref|ZP_04435418.1| alanine racemase [Enterococcus faecalis TX1322]
 gi|229308178|gb|EEN74165.1| alanine racemase [Enterococcus faecalis TX1322]
          Length = 371

 Score =  273 bits (698), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSIVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|256959977|ref|ZP_05564148.1| alanine racemase [Enterococcus faecalis Merz96]
 gi|293383728|ref|ZP_06629635.1| alanine racemase [Enterococcus faecalis R712]
 gi|293388796|ref|ZP_06633289.1| alanine racemase [Enterococcus faecalis S613]
 gi|312907057|ref|ZP_07766053.1| alanine racemase [Enterococcus faecalis DAPTO 512]
 gi|312978687|ref|ZP_07790414.1| alanine racemase [Enterococcus faecalis DAPTO 516]
 gi|256950473|gb|EEU67105.1| alanine racemase [Enterococcus faecalis Merz96]
 gi|291078804|gb|EFE16168.1| alanine racemase [Enterococcus faecalis R712]
 gi|291081953|gb|EFE18916.1| alanine racemase [Enterococcus faecalis S613]
 gi|310627042|gb|EFQ10325.1| alanine racemase [Enterococcus faecalis DAPTO 512]
 gi|311288394|gb|EFQ66950.1| alanine racemase [Enterococcus faecalis DAPTO 516]
          Length = 371

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N  +    L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQNECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPKSNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E           K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLNPEETKQAVRFVQFHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|190894994|ref|YP_001985287.1| alanine racemase [Rhizobium etli CIAT 652]
 gi|190700655|gb|ACE94737.1| alanine racemase protein [Rhizobium etli CIAT 652]
          Length = 377

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 195/365 (53%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E 
Sbjct: 23  LTIDLAALGRNYLKLASMLAPVRAGAVVKADAYGLGAERVAQTLYDQGCRHFFVAQFVEA 82

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V+LR      A+IFVL G+ PG E    ++ +IPV++S+ Q   +S        S P  L
Sbjct: 83  VRLRPALAEDAQIFVLNGLQPGNEVACAESGIIPVLNSLAQWRQWSATARLLTRSLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +      +    ++  I+SHLACAD+  S  N  QL     + 
Sbjct: 143 QFDTGMSRLGFPWEERAELAAVIGDGANVEILFIMSHLACADELDSGQNGDQLAEMARIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG      ++PM+ VV  +  ++  R
Sbjct: 203 DEFPGFDISFANSGGVFLGDAYHGVLARPGIALYGGAPNAGGTNPMEPVVRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              +G  + YGG     R++ +A  A GYADG P +L              G  + KG  
Sbjct: 263 TVPSGARIGYGGAHVTRRETRLATIAAGYADGLPRSLGDC-----------GAVYHKGIR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DIT      + +G  +++ GP+  L+DVA A+GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDITALPEGALRLGSLVEVLGPNQTLEDVAGAAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YDRQY 376


>gi|300870894|ref|YP_003785765.1| alanine racemase [Brachyspira pilosicoli 95/1000]
 gi|300688593|gb|ADK31264.1| alanine racemase [Brachyspira pilosicoli 95/1000]
          Length = 368

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 111/372 (29%), Positives = 183/372 (49%), Gaps = 23/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL AL+NN   + +++GN +   +VK NAYG G   ++  L N  V    V +VEEG
Sbjct: 7   AEIDLKALQNNIKIIRSMTGNTKLLTIVKANAYGHGIVDMSKQLENLNVDALGVATVEEG 66

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQ 127
           VK+R    +  I VL+     + + +   +L P+IS+      +   L +        ++
Sbjct: 67  VKIREAGVKIPIIVLFQHFKNEAEDVCRYDLTPIISNAECLDDYDRFLKNHNKKLKLHIK 126

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA---DDPSSHVNSVQLERFRT 184
           VDTG NR+G   ++ L   +   +    ++  I +H A +   DD S      Q++ F  
Sbjct: 127 VDTGLNRMGAKPKDVLSLANKILSYGTLEIEGINTHYAASDGFDDISKEFTENQIKIFTD 186

Query: 185 LISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +++  K     +      +S+ +L   N +F + R GI +YG T+K+      + ++  +
Sbjct: 187 VLNELKTNGIKINNAHTANSAALLYYKNAYFDMVRAGIVVYGYTEKL-YDFGFKPILNLK 245

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +++IL RK    E VSYG   K  +D+ IAV  IGYADG    LS              +
Sbjct: 246 SKVILTRKIKKNETVSYGMTWKADKDTNIAVIPIGYADGLSRKLSN-----------NWE 294

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVALASGTTNYDL 357
             I G   PI+GKI MD+ M DI +  +I+  D + IFG D  +  + +A    + ++++
Sbjct: 295 VKINGKYYPIIGKICMDIIMADIGNEDNIKEEDEVLIFGDDERLNANTMAKKIESISHEV 354

Query: 358 LVRIGTRYAKFY 369
           LVRIG R  + Y
Sbjct: 355 LVRIGERVKRVY 366


>gi|237724567|ref|ZP_04555048.1| alanine racemase [Bacteroides sp. D4]
 gi|229437126|gb|EEO47203.1| alanine racemase [Bacteroides dorei 5_1_36/D4]
          Length = 821

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKAMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P   F + R GI LYG     N+     +  T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQIINNVS--TLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKASYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|323526510|ref|YP_004228663.1| alanine racemase [Burkholderia sp. CCGE1001]
 gi|323383512|gb|ADX55603.1| alanine racemase [Burkholderia sp. CCGE1001]
          Length = 356

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 154/367 (41%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I  +AL NN       +  ++  AVVK NAYG G  +  P L       F +  
Sbjct: 3   RPLSATIHTSALANNLAVARRYAPRSKIWAVVKANAYGHGLARAFPGLRA--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE VKLR       I +L G   P    +I   +L   + S  QL              
Sbjct: 61  LEEAVKLRELGWAGPILLLEGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + ++       +   +      +++H + AD       + Q+E F 
Sbjct: 120 IQLKMNSGMNRLGYTPEKFRAAWERARACQGVGQITLMTHFSDADGERGI--AHQMEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G   SLA+S+  L  P  HF   RPGI LYG +        +   +Q  +T  
Sbjct: 178 RGAHGIAGAR-SLANSAATLWHPESHFDWVRPGIILYGASPSGVSAAIEGTGLQPAMTLA 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G+ V YG   K      I V A GYADGYP                G  
Sbjct: 237 SELIAVQSVAEGDTVGYGSLFKARAPMRIGVVACGYADGYPR-----------VAPEGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+T   +  VG  ++++G  + +DDVA A GT  Y+L+ 
Sbjct: 286 VIVDGVRTRIVGRVSMDMLTVDLTPIPTASVGSRVELWGTSLPIDDVARACGTIGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|5805088|emb|CAB53547.1| alanine racemase [Rhizobium leguminosarum bv. viciae]
          Length = 354

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 126/363 (34%), Positives = 187/363 (51%), Gaps = 15/363 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E V+
Sbjct: 2   IDLAALGRNYRKLVSMLAPVRAGAVVKADAYGLGAERVARTLYSEGCRHFFVAQFVEAVR 61

Query: 71  LRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQV 128
           LR      A+IFVL G+ PG E    +  ++PV++S+ Q   + +         P  LQ 
Sbjct: 62  LRPALAHDAQIFVLNGLQPGNEIACAEMGIVPVLNSLAQWRQWSAAARILKRCLPAVLQF 121

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG +RLG   +E  +      +    ++  I+SHLA ADD  S  N  Q      +   
Sbjct: 122 DTGMSRLGFPREERRELAAALRDGSNVEILFIMSHLASADDMGSEQNGEQFAEMSRIADE 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           + G + S A+S G+ LG  Y+  L RPGI+LYGG     + +PM+ VV+    ++  R  
Sbjct: 182 FPGFDISFANSGGVFLGEAYYGVLARPGIALYGGAPNAGEKNPMEPVVSLNVAVVQTRTV 241

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG  V YGG     R++ +A  A GYADG P  LS             G  + KG  +P
Sbjct: 242 PAGAKVGYGGAHVTQRETRLATIAAGYADGLPRCLSDR-----------GAVYFKGVRLP 290

Query: 309 ILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           I+G+++MD T  DIT      +  G  +++ G    L+D+A  +GT +Y++L  +G RY 
Sbjct: 291 IVGRVSMDSTTVDITALPEGALTFGSLVEVLGRHQTLEDIARDAGTISYEILTGLGDRYD 350

Query: 367 KFY 369
           + Y
Sbjct: 351 RQY 353


>gi|116493287|ref|YP_805022.1| alanine racemase [Pediococcus pentosaceus ATCC 25745]
 gi|122265249|sp|Q03DZ2|ALR_PEDPA RecName: Full=Alanine racemase
 gi|116103437|gb|ABJ68580.1| alanine racemase [Pediococcus pentosaceus ATCC 25745]
          Length = 374

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 89/378 (23%), Positives = 145/378 (38%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +L I+  A++NN    ++ L G++   AVVK N YG G  + A     AG   F V
Sbjct: 6   HRPSKLVINAEAIRNNVKNEISRLDGHSELFAVVKANGYGHGIVETAQFTKQAGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR       I VL GI   +   +   N I +          +  +      
Sbjct: 66  AILDEALALRDAGLTETILVL-GITDVKYAKLAAENDISLTVGDQAWLDEATQILNQKPL 124

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +DTG  R+G                 +      + +H A AD+  +   ++Q+ER
Sbjct: 125 KVHLGIDTGMGRIGFQDGASFKKAADYLEQSQQFNFEGVFTHFATADEKDTTYFNLQVER 184

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F   IS        +   +++  L     +  + R G+ +YG       +     +Q  +
Sbjct: 185 FNHFISQLTRRPRYVHVSNTATSLWHAACNGNMIRFGVGIYGMNPSGKTLESPFDLQPAM 244

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + E+ +   +    G  +SYG       D  I    IGYADGY   L G           
Sbjct: 245 SLESELSFSKLVQKGRSISYGATYTAEEDEWIGTIPIGYADGYERRLQGF---------- 294

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                I G    I+G+I MD  M  +  S  +  G  + + G      I + D+A  +GT
Sbjct: 295 --HVLIDGQFCEIVGRICMDQMMVRLPKSYPV--GTKVILAGKSGEKSITMTDIAEYAGT 350

Query: 353 TNYDLLVRIGTRYAKFYT 370
            NY++      R  + YT
Sbjct: 351 INYEITCGFTQRLPRIYT 368


>gi|206977042|ref|ZP_03237942.1| alanine racemase [Bacillus cereus H3081.97]
 gi|206744691|gb|EDZ56098.1| alanine racemase [Bacillus cereus H3081.97]
          Length = 389

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKGNAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AI YADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIAYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CKVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|116249082|ref|YP_764923.1| putative alanine racemase [Rhizobium leguminosarum bv. viciae 3841]
 gi|109940037|sp|Q9RAE7|ALR2_RHIL3 RecName: Full=Alanine racemase, catabolic
 gi|115253732|emb|CAK12125.1| putative alanine racemase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 377

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 126/363 (34%), Positives = 187/363 (51%), Gaps = 15/363 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E V+
Sbjct: 25  IDLAALGRNYRKLVSMLAPVRAGAVVKADAYGLGAERVARTLYSEGCRHFFVAQFVEAVR 84

Query: 71  LRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQV 128
           LR      A+IFVL G+ PG E    +  ++PV++S+ Q   + +         P  LQ 
Sbjct: 85  LRPALAHDAQIFVLNGLQPGNEIACAEMGIVPVLNSLAQWRQWSAAARILKRCLPAVLQF 144

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG +RLG   +E  +      +    ++  I+SHLA ADD  S  N  Q      +   
Sbjct: 145 DTGMSRLGFPREERRELAAALRDGSNVEILFIMSHLASADDMGSEQNGEQFAEMSRIADE 204

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           + G + S A+S G+ LG  Y+  L RPGI+LYGG     + +PM+ VV+    ++  R  
Sbjct: 205 FPGFDISFANSGGVFLGEAYYGVLARPGIALYGGAPNAGEKNPMEPVVSLNVAVVQTRTV 264

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG  V YGG     R++ +A  A GYADG P  LS             G  + KG  +P
Sbjct: 265 PAGAKVGYGGAHVTQRETRLATIAAGYADGLPRCLSDR-----------GAVYFKGVRLP 313

Query: 309 ILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           I+G+++MD T  DIT      +  G  +++ G    L+D+A  +GT +Y++L  +G RY 
Sbjct: 314 IVGRVSMDSTTVDITALPEGALTFGSLVEVLGRHQTLEDIARDAGTISYEILTGLGDRYD 373

Query: 367 KFY 369
           + Y
Sbjct: 374 RQY 376


>gi|253999137|ref|YP_003051200.1| alanine racemase [Methylovorus sp. SIP3-4]
 gi|253985816|gb|ACT50673.1| alanine racemase [Methylovorus sp. SIP3-4]
          Length = 356

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 161/364 (44%), Gaps = 19/364 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L AL++N   +   + +ART AVVK N YG G   +A  L       F V  
Sbjct: 2   RPITATIHLAALQHNLRRVRDYAPHARTMAVVKANGYGHGLLNVARGLAE--ADGFAVLR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E ++LR    Q  + +L G+    E        + ++          +  S  V    
Sbjct: 60  LQEALELRAAGYQQTLLLLEGVFESTELNAAADAGVSIVVHAEHQIAMLEQASLPVPIAV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++++TG NRLG   Q                   +++H A AD+     +++Q  RF  
Sbjct: 120 FVKMNTGMNRLGFVPQAFASAVARLAACPQVSSITLMTHFATADEAPGIASALQ--RFEA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
             +  +    SLA+S+ IL  P  H    RPGI LYG T           +Q V+  ++ 
Sbjct: 178 GAAGMQ-YPKSLANSAAILRHPESHADWVRPGIMLYGATPVQSVTAAHFGLQAVMHLQSE 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I ++    GE + YG      R++ + + A GYADGYP    G           G    
Sbjct: 237 LIAVQTLPPGESLGYGATFVAERETRVGIVACGYADGYPRHAPG-----------GTPIA 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +   LG+++MDM   DITD  + ++G  ++++G  I +D VA A GT  Y+LL  +
Sbjct: 286 VAGQVSKTLGRVSMDMLFVDITDIPAADIGSPVELWGATIPVDAVAEACGTVGYELLCAV 345

Query: 362 GTRY 365
            +R 
Sbjct: 346 TSRV 349


>gi|330721327|gb|EGG99406.1| Alanine racemase2C catabolic [gamma proteobacterium IMCC2047]
          Length = 334

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 15/340 (4%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            A++K +AYG G E+ A AL N+      V  ++E + LR       I +L G    +E 
Sbjct: 1   MAMLKADAYGHGAEQAALAL-NSYTDAIAVAFIDEAIALREAGINKPITLLQGTFDEREI 59

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
            +     + ++    +     +    G      L+ D+G +RLG S  E   +       
Sbjct: 60  ELACQYTLDLVVLHGEQAEMLEAADPGCQLTVWLKFDSGMHRLGFSADEYAYWYERLSKH 119

Query: 153 KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL 212
                  +++H +CAD+P + V   Q   F            SLA+S+ I+  P+     
Sbjct: 120 PNVAEVRLMTHFSCADEPENPVTKEQEALFDKKTKGLSCTTYSLANSAAIMAWPSTLRDW 179

Query: 213 TRPGISLYGGTDKINK---SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
            RPG+ LYG     +       ++ V+T +  II  R   AGE V YG     +    I 
Sbjct: 180 VRPGVMLYGVCPFADWRENHRDLRPVMTLKTVIISTRTLEAGEAVGYGRSWVASEKCRIG 239

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE 329
           VA+IGYADGYP  L             G    + G  V ++G++TMDM   D+T    ++
Sbjct: 240 VASIGYADGYPRCLPN-----------GTPVLVNGQRVSMVGRVTMDMITLDLTGVADVK 288

Query: 330 VGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           VGD + ++G  + ++++A  +GT  Y+LL  +  R  + Y
Sbjct: 289 VGDEVTLWGEGLAVEEIAEYAGTIAYELLTGVSKRVPRIY 328


>gi|315029851|gb|EFT41783.1| alanine racemase [Enterococcus faecalis TX4000]
          Length = 371

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I   +IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVSIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|325845425|ref|ZP_08168718.1| alanine racemase [Turicibacter sp. HGF1]
 gi|325488531|gb|EGC90947.1| alanine racemase [Turicibacter sp. HGF1]
          Length = 380

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 148/375 (39%), Gaps = 21/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M        ++DL A+  N   +  L  N +  AVVK N YG G  +++     AGV + 
Sbjct: 1   MSFYRDTWAEVDLDAIVYNVQQIKKLHPNKKIFAVVKANGYGHGDVEVSRVALLAGVTNL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ ++E + LR    +A I VL         I    N+         ++     +    
Sbjct: 61  AVSGLDEALGLRKAGIEAPILVLGMTRLKDVSIAAQYNIALTAHDECWISKL-VELPLET 119

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++D+G +RLGL+ +E +  T              +       D  +     Q++
Sbjct: 120 PVKVHLKIDSGMHRLGLTTKEKVKETFELLKAAPKVELEGVFTHMATADCDADYLEYQIK 179

Query: 181 RFRTLISHYK--GIEASLASSSGILLGPNYHFQL-TRPGISLYGGTD---KINKSHPMQT 234
            F +LI       I+     ++  LL   + F    R G+ LYG       I     ++ 
Sbjct: 180 TFESLIEDLDLSSIKYVHIENTATLLQREFEFDHAIRLGLGLYGINPDAKFIPLEFDLKP 239

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ++I  +++   G+ V YG       D  I V  IGYADG+     G +       
Sbjct: 240 ALKLYSKITQVKRINKGDKVGYGATYTAENDEWIGVVPIGYADGWIRAHQGRN------- 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  ++G    I+G++ MD  M  +     +E+G  + + G  + ++ VA   GT +
Sbjct: 293 -----VIVEGKECEIIGRVCMDQLMIRLPH--EVEMGTMVTLIGDGMPVERVADEIGTIS 345

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  +  R  + Y
Sbjct: 346 YEILCMLSDRVPRVY 360


>gi|206972274|ref|ZP_03233221.1| alanine racemase [Bacillus cereus AH1134]
 gi|229067995|ref|ZP_04201308.1| Alanine racemase [Bacillus cereus F65185]
 gi|229077594|ref|ZP_04210234.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|229176832|ref|ZP_04304233.1| Alanine racemase [Bacillus cereus 172560W]
 gi|206732848|gb|EDZ50023.1| alanine racemase [Bacillus cereus AH1134]
 gi|228606640|gb|EEK64060.1| Alanine racemase [Bacillus cereus 172560W]
 gi|228705713|gb|EEL58059.1| Alanine racemase [Bacillus cereus Rock4-2]
 gi|228715133|gb|EEL66996.1| Alanine racemase [Bacillus cereus F65185]
          Length = 389

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|269214143|ref|ZP_05983692.2| alanine racemase [Neisseria cinerea ATCC 14685]
 gi|269144442|gb|EEZ70860.1| alanine racemase [Neisseria cinerea ATCC 14685]
          Length = 422

 Score =  273 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            NEF+R   ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     
Sbjct: 67  RNEFMRPLNVQIRLGNLRHNYQILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADG 124

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +++EG+KLR       I +L G+    E    +   +                   
Sbjct: 125 FAVATIDEGIKLRESGITNPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWK 184

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+
Sbjct: 185 KPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQM 244

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E F       +G E SLA+S+ IL  P       R G++LYG +        ++ V+   
Sbjct: 245 EAFDLGTKGLEGEE-SLANSAAILNIPEARRNWGRAGLALYGISPFGGSDDRLKPVMRLS 303

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            RI   R       + YG     ++ + + + A GYADGYP                   
Sbjct: 304 TRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PTNTP 352

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+ 
Sbjct: 353 VAVDGKLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMC 411

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 412 NI-KRAKFTY 420


>gi|237709333|ref|ZP_04539814.1| alanine racemase [Bacteroides sp. 9_1_42FAA]
 gi|229456718|gb|EEO62439.1| alanine racemase [Bacteroides sp. 9_1_42FAA]
          Length = 821

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 149/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL +N +     L    +   +VK +AYG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLNALVDNLNYYRSKLKSETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR       I ++        K +FD  L P + S   L    K        + P  
Sbjct: 523 GSDLRKAGITCSIMIMNPELTA-FKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + +E  +       +       + SHL  +D          Q+E F  
Sbjct: 582 IKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEA 641

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +++GI   P+  F + R GI LYG     N+     +  T +
Sbjct: 642 ASECLQEAFQHKILRHICNTAGIERYPDAQFDMVRLGIGLYGIDPFTNQIINNVS--TLK 699

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I +    E V Y  +  L RDS IA   IGYADG    L                
Sbjct: 700 TTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGH----------AY 749

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD   IFG D+ +  ++    T  Y++L 
Sbjct: 750 CLVNGQKASYVGNICMDVCMIDVTDI-DCKEGDKAIIFGDDLPVTVLSEILETIPYEILT 808

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 809 SVSNRVKRVY 818


>gi|309790096|ref|ZP_07684669.1| alanine racemase [Oscillochloris trichoides DG6]
 gi|308227821|gb|EFO81476.1| alanine racemase [Oscillochloris trichoides DG6]
          Length = 845

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/376 (28%), Positives = 159/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    L+IDL AL  N   + AL+G     AV+K +AYG G  + A A   AG +   V 
Sbjct: 480 DRPTWLRIDLDALAANVRHLRALAG-VPLMAVLKADAYGHGAIRAARAALGAGAEALAVA 538

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
           ++ E   LR +   ARI +L    P Q        L   +         S+     G   
Sbjct: 539 TLGEARTLRAHGIAARILLLGYTPPWQADETVRLGLDCTLFDHDSALALSRAAQSAGRPV 598

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VDTG  RLGL   E   F          ++  + +H A AD+        QLERF
Sbjct: 599 RVHIKVDTGMARLGLVHSEVGPFLTVLHQLPGLEIHGLYTHFASADEADLRAAQAQLERF 658

Query: 183 RTLISH--YKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQTV 235
             L++     G+   L    +S+  L  P   F + RPGI+ YG     +   P   + V
Sbjct: 659 NHLLADLVAAGLRPPLVHAANSAATLRLPAARFDMVRPGIACYGLNPSPHTPLPPGFRPV 718

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  + +  +R+  AG  VSYGG    T+ + IA    GYADG                 
Sbjct: 719 LSFHSEVAQVRELPAGTPVSYGGTYVTTQPTRIATIPAGYADGIRRA------------P 766

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
                 I G   P++G+I MD TM D++    +  GD + + G     +I  D+VA   G
Sbjct: 767 PWQSVLIAGQRAPVVGRICMDYTMVDVSHIPGVRRGDAVVLIGRQGADEISADEVAEWLG 826

Query: 352 TTNYDLLVRIGTRYAK 367
           T +Y++L  I  R  +
Sbjct: 827 TISYEVLTSILPRVPR 842


>gi|315149610|gb|EFT93626.1| alanine racemase [Enterococcus faecalis TX0012]
          Length = 371

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVETAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
           T ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  TLLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGSVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|229101047|ref|ZP_04231827.1| Alanine racemase [Bacillus cereus Rock3-28]
 gi|228682367|gb|EEL36464.1| Alanine racemase [Bacillus cereus Rock3-28]
          Length = 389

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEASFYRDTWVEVDLDAIYNNITHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDINVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           +      + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 NGSSIMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVDGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|302553591|ref|ZP_07305933.1| alanine racemase [Streptomyces viridochromogenes DSM 40736]
 gi|302471209|gb|EFL34302.1| alanine racemase [Streptomyces viridochromogenes DSM 40736]
          Length = 390

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 105/382 (27%), Positives = 163/382 (42%), Gaps = 30/382 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N  ++ A +  A   AVVK  AYG G  + A A   AG       + 
Sbjct: 16  RARAEIDLAALRANVRALRAHAPGAALMAVVKSEAYGHGAVQCARAAVAAGADWLGTATP 75

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           EE + LR      RI        G  +   + +L   +S +       +     G     
Sbjct: 76  EEALALRAAGLPGRIMCWLWTPGGPWREAIEADLDVSVSGMWALDEVTAAARLAGRPARV 135

Query: 125 ALQVDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            L+ DTG  R G        E +     +  + L +++ + SH ACAD+P     + Q+ 
Sbjct: 136 QLKADTGLGRNGCQPGDDWAELVREALRAEAEGLLRVTGLWSHFACADEPGHPSIAAQIG 195

Query: 181 RFRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHP 231
            FR ++  +  +GI      +A+S   L  P  HF L R GI+LYG +            
Sbjct: 196 LFREMVGHAEQQGIRPEVRHIANSPATLTVPESHFDLVRTGIALYGISPSPELGTPADFG 255

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V+T  A + L++    G  VSYG Q     ++ + +  +GYADG P   S       
Sbjct: 256 LRPVMTLSASLALVKHVPGGHGVSYGHQYVTPGETTLGLVPLGYADGIPRHAS------- 308

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                 G   ++G    I G++ MD  + D+      E G    +FGP    +   +D A
Sbjct: 309 ----SAGPVLVEGKWRTIAGRVAMDQFVVDLGGDEP-EAGAEAVLFGPGDRGEPTAEDWA 363

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
            A+GT  Y+++ RIGTR  + Y
Sbjct: 364 QAAGTIAYEVVTRIGTRVPRVY 385


>gi|161723116|ref|YP_439909.2| alanine racemase [Burkholderia thailandensis E264]
 gi|167616568|ref|ZP_02385199.1| alanine racemase [Burkholderia thailandensis Bt4]
 gi|257143071|ref|ZP_05591333.1| alanine racemase [Burkholderia thailandensis E264]
          Length = 374

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + N+R  +VVK NAYG G E++ PAL +       +  
Sbjct: 3   RPIVARIHPDAIAHNLAIVRQKAPNSRVWSVVKANAYGHGIERVYPALAD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRALGWTKPVLLLEGIFDAADIEIADRHRLTVAVHGDEQLKLLTSAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG       D    +          ++ H A ADD        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPSAFRDAWERAAAAPSIGRIALMMHFANADDGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGATRHVADVPLRAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG +    R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLSPGETVGYGRRFAAEREMRIGVVACGYADGYPRHA-----------PSGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T      VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVLTRVVGRVSMDMLTVDLTPCPHAGVGSTVELWGKQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|229094951|ref|ZP_04225953.1| Alanine racemase [Bacillus cereus Rock3-29]
 gi|229113905|ref|ZP_04243337.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228669546|gb|EEL24956.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228688464|gb|EEL42340.1| Alanine racemase [Bacillus cereus Rock3-29]
          Length = 389

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEASFYRDTWVEVDLDAIYNNITHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDINVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVDGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|266620460|ref|ZP_06113395.1| alanine racemase [Clostridium hathewayi DSM 13479]
 gi|288867938|gb|EFD00237.1| alanine racemase [Clostridium hathewayi DSM 13479]
          Length = 394

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 158/382 (41%), Gaps = 29/382 (7%)

Query: 5   EFLRL--KIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            + R+   ++L A++ N  +M A L        VVK + YG G   +A    +  V  + 
Sbjct: 3   RYSRVYETVNLDAIRQNMEAMRANLKEGTGMIGVVKADGYGHGSVPVA-CAIDPYVSGYA 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGV 120
             + EE V LR +     I +L        + +    L P +             +  G 
Sbjct: 62  TATPEEAVILRRHGITKPILILGVSPESSFEDLIRYELRPAVFRYESAARLSELSVKAGK 121

Query: 121 SHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
             P  + +DTG +R+G  +   A + T         ++  + +H A AD+      + Q+
Sbjct: 122 ISPIHIALDTGMSRIGYPVTAAAAEETVRISRLPGIRIEGLFTHFARADERDKGATARQM 181

Query: 180 ERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHP 231
           E F   IS              ++S+GIL  P  +F   R GIS+YG         +   
Sbjct: 182 ELFTEFISMLTERGITIPVLHCSNSAGILELPQANFNAVRAGISIYGLYPSDEVEKEPVH 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   +  ++ I  ++    G  VSYGG     R + IA   +GY DGYP +LSG      
Sbjct: 242 LTPAMELKSTISYLKTIAPGTPVSYGGTFTAERKTAIATIPVGYGDGYPRSLSGR----- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                 G   I+G    ILG++ MD  M D T+    E GD + + G     +I ++++A
Sbjct: 297 ------GDVLIRGRRARILGRVCMDQLMVDTTEIPEAEEGDEVTLIGKDGDEEITVEELA 350

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              G  +Y++L  IG R  + Y
Sbjct: 351 RIGGGFHYEILCDIGKRVPRVY 372


>gi|290892923|ref|ZP_06555913.1| alanine racemase [Listeria monocytogenes FSL J2-071]
 gi|290557499|gb|EFD91023.1| alanine racemase [Listeria monocytogenes FSL J2-071]
          Length = 368

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++     
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+  ++EA        +    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTVEEARQIETTIASDNQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGEDNGNTITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|253576997|ref|ZP_04854320.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843607|gb|EES71632.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 392

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 89/384 (23%), Positives = 159/384 (41%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +IDL AL++N+  +     + +  A VK NAYG G   +A  L   G     V  
Sbjct: 6   RPTHAEIDLDALRSNFEELRRRQQDMKMLACVKANAYGHGAVPVAKELEQIGADYLSVAF 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS--KLMSCGVSH 122
           ++E ++LR    Q  I VL    P   +  ++ ++   + S   L               
Sbjct: 66  LDEALELRKAGIQLPILVLGYTPPHGVRTAWEHDVTLNVFSNEVLEAIEALNPAEFPHKL 125

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++D+G  R+GL    EA+ F   +      ++  + +H A AD+        Q  R
Sbjct: 126 KVHIKIDSGMGRVGLLPGDEAVAFVRKAMQVPHVEVEGLFTHYATADEEDKSYTLEQYRR 185

Query: 182 FRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           F+ ++   +     +      +S+  +  P    Q+ R GI+LYG             + 
Sbjct: 186 FQGVVEALREHNIRIPIIHTGNSAIAIDMPELSVQMVRIGIALYGLYPSDEVRRDQVKLT 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ +   + ++   A   +SYG +    ++  IA   IGYADGY   L+G        
Sbjct: 246 PVLSLKTETVRVKTLPAHSAISYGARYITEQEERIATLPIGYADGYSRMLNG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIF----GPDIKLDD 345
                +  I+G  VP+ G I MD  M  +     ++  I+ G+ + +     G +I   +
Sbjct: 298 ---KAQVLIRGRRVPVTGVICMDQCMVSLQALAEEAEEIQAGEEVVLIGRQAGEEITAGE 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A A GT +Y+L+  +  R  + Y
Sbjct: 355 LASAMGTIHYELICMLAHRVPRVY 378


>gi|91775684|ref|YP_545440.1| alanine racemase [Methylobacillus flagellatus KT]
 gi|122985541|sp|Q1H1N8|ALR_METFK RecName: Full=Alanine racemase
 gi|91709671|gb|ABE49599.1| alanine racemase [Methylobacillus flagellatus KT]
          Length = 357

 Score =  272 bits (696), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 IDL AL++N + +   +  +R  AVVK +AYG G  ++AP L       F V  
Sbjct: 2   RATTATIDLGALRHNLNLVRQRAPGSRVLAVVKADAYGHGLLRVAPGLAE--ADGFGVLR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI-PVISSVPQLTFYSKLMSCG-VSH 122
           +EE + LR    + R+ +L GI    E      + I  V+ +  QL  +  + +      
Sbjct: 60  LEEALALREAGYRQRLLLLEGIFSMDELGAAAQHGISVVVHNAQQLAMFEAMAAASVKPI 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++++G NRLG   Q             +     +++H A AD+      + QL+ F
Sbjct: 120 SVFLKMNSGMNRLGFKSQAYKQALQRLEACPVVADVSLMTHFATADEERGI--ADQLKEF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAE 239
             + + +     SLA+S+ IL  P  H    RPGI LYG +        S  ++  +   
Sbjct: 178 DAVTAGWHH-PVSLANSAAILRFPEAHRDWVRPGIILYGASPVSGVSAASFGLRPAMRFT 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++   AG+++ YG +   T+ + +A+ A GYADGYP                G  
Sbjct: 237 SEVIAVQTLEAGDILGYGARFTATQATRVAIVACGYADGYPRHAPN-----------GTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G+    LG+++MDM   DI+     +VG  ++++G  + +D VA A+GT  Y+LL 
Sbjct: 286 IAIDGHRTQTLGRVSMDMLFADISQLPDADVGSQVELWGEVVPVDAVAEAAGTVGYELLC 345

Query: 360 RIGTRY 365
            +  R 
Sbjct: 346 AVAPRV 351


>gi|210621786|ref|ZP_03292815.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275]
 gi|210154550|gb|EEA85556.1| hypothetical protein CLOHIR_00760 [Clostridium hiranonis DSM 13275]
          Length = 388

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 166/375 (44%), Gaps = 24/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +IDL A K N  S+   L+   +   +VK +AYG G  +IA  L    V+   V+  
Sbjct: 11  AWAEIDLDAFKRNLKSIRKVLNNGEKICGIVKADAYGHGSVEIAKTLEENDVEYLAVSRA 70

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
           EE ++LR    +  I +L      + + I   +++  I S+      ++      +    
Sbjct: 71  EEAMELRRKGLELPILILGYTPEQRYRDIIRNDVMFTIYSMEDAVKLNEAAEELEMDAKV 130

Query: 125 ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            +++DTG NRLG  + +E++             +  I +H A AD+       +Q E+F+
Sbjct: 131 HIKIDTGMNRLGFKVTEESICEIKKISEMDRISIKGIFTHFAAADEVDKSFTEMQGEKFK 190

Query: 184 TLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTV 235
            +++    +G+E  L    +S+ I+   +  F + R GI +YG     +   +  P++ V
Sbjct: 191 YMLNRLKEEGVEVPLVHAANSAAIVDCDDLKFDMVRAGIIMYGCYPSDDIMKERVPVEPV 250

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T + R+  I+    GE +SYG   +      IA  AIGYADG+                
Sbjct: 251 MTIKTRVSHIKTIEPGEKISYGCTYEAKEKERIATLAIGYADGFVRGRKNP--------- 301

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTN 354
              K  I G    ++G+I MD  M  I     I+VGD   +FG   + + + A   GT +
Sbjct: 302 ---KVCINGKDYEVVGRICMDQCMIKIGMDDDIKVGDEAVVFGKGGVSISEFAEDCGTIS 358

Query: 355 YDLLVRIGTRYAKFY 369
           ++++  I  R  + +
Sbjct: 359 HEIMCNISRRIPRVF 373


>gi|319405446|emb|CBI79065.1| Alanine racemase [Bartonella sp. AR 15-3]
          Length = 373

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 118/354 (33%), Positives = 188/354 (53%), Gaps = 15/354 (4%)

Query: 20  WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR 79
           + ++         +AVVK +AYGLG EK+APALY AG + FF+  ++E ++L+   PQ  
Sbjct: 30  YKTLVQRVAPIECSAVVKADAYGLGAEKVAPALYQAGCRTFFIAHLKEALQLKAILPQNI 89

Query: 80  IFV-LYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQVDTGFNRLGL 137
             V L G+ P  E++I    ++PV++S  ++  +       G   P  +Q+DT  NRLGL
Sbjct: 90  TLVLLNGLPPNAEELITKAGIVPVLNSRHEIENWQMHCQKNGKKFPAIIQIDTNMNRLGL 149

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
             +E      N    +   +  IISHLA  DD +   N  Q    +T ++     +ASLA
Sbjct: 150 DQEELKWLIQNPTLFERIDIKYIISHLANGDDVTHASNCAQKNAMKTALAQLPACKASLA 209

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +S GI LGP+++F L RPGI+LYG          +++V+  +A++I  R   AG  V YG
Sbjct: 210 NSGGIFLGPDFYFDLVRPGIALYGIDPHKKHPTSLKSVLKLKAQVIQSRYTEAGSPVGYG 269

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
           G     + S++   AIGYADG+   LS             G  + K + +PI+G+I+MD 
Sbjct: 270 GSFITQKPSILTTIAIGYADGWLRNLSN-----------KGFVYFKKHKLPIIGQISMDS 318

Query: 318 TMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              D T+      + GD++++ G    +++VA  +GT  Y++L  +G+RY + Y
Sbjct: 319 ITVDATNLKHEKPKRGDWVELIGRHQTIENVAADAGTIPYEILTSLGSRYKRIY 372


>gi|229159406|ref|ZP_04287426.1| Alanine racemase [Bacillus cereus R309803]
 gi|228624073|gb|EEK80879.1| Alanine racemase [Bacillus cereus R309803]
          Length = 389

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNITHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRVGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   R+  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTRVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTRVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|37526452|ref|NP_929796.1| alanine racemase, catabolic [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785883|emb|CAE14934.1| Alanine racemase, catabolic [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 362

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 156/367 (42%), Gaps = 19/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L AL+NN   +    GN++  AVVK NAYG G   I  +L       F +  
Sbjct: 3   RPISATIHLDALENNLAIIRNKVGNSKIWAVVKANAYGHGLHCIWRSLDQ--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             E + LR    Q  I +L G   P    II +  L  V+ S  QL       +      
Sbjct: 61  FHEAILLREQGWQGAILLLEGFFKPEDLPIIDEYQLTTVVHSHWQLEAIEA-ANLSKPIN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG    +       +   +      ++SH A AD  +  ++  +     
Sbjct: 120 IYLKLNSGMNRLGFPADQYSAVLSLARGIRQIGQITLMSHFANADKDNKEISVTEQLNVI 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
             +S    I   LA+S+  L  P  H    RPGI LYG +            ++ V++ +
Sbjct: 180 HSVSQGLDISQCLANSAASLWYPQTHRDWVRPGIVLYGASPSGKWKDIADIGLKAVMSLQ 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+   AG+ + YG +        +   A GYADGYP                G  
Sbjct: 240 SEIIAIQNLKAGDKIGYGSEYTAPGPMRVGTVACGYADGYPR-----------CAMTGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    +LG ++MDM   D+T     ++G  ++++G ++ +DDVA +SGT  Y+LL 
Sbjct: 289 IIVDGVRTQVLGTVSMDMLSVDLTPCPQAQIGSPVELWGQNLPVDDVAESSGTIGYELLC 348

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 349 ALANRVP 355


>gi|228950772|ref|ZP_04112901.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|89475552|gb|ABD73308.1| alanine racemase [Bacillus thuringiensis serovar kurstaki]
 gi|228808912|gb|EEM55402.1| Alanine racemase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 389

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKAEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|83651967|gb|ABC36031.1| alanine racemase [Burkholderia thailandensis E264]
          Length = 386

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + N+R  +VVK NAYG G E++ PAL +       +  
Sbjct: 15  RPIVARIHPDAIAHNLAIVRQKAPNSRVWSVVKANAYGHGIERVYPALAD--ADGIALLD 72

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 73  LDEAVRVRALGWTKPVLLLEGIFDAADIEIADRHRLTVAVHGDEQLKLLTSAKTTRPIDI 132

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG       D    +          ++ H A ADD        Q+  F  
Sbjct: 133 QLKMNSGMNRLGYRPSAFRDAWERAAAAPSIGRIALMMHFANADDGE---IDWQMSVFDA 189

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 190 ATDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGATRHVADVPLRAAMTLTS 248

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG +    R+  I V A GYADGYP                G   
Sbjct: 249 RIIGVQTLSPGETVGYGRRFAAEREMRIGVVACGYADGYPRHA-----------PSGTPI 297

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T      VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 298 AVDGVLTRVVGRVSMDMLTVDLTPCPHAGVGSTVELWGKQVRVDDVAEAAGTIGYELMCA 357

Query: 361 IGTRYA 366
           +  R  
Sbjct: 358 LARRVP 363


>gi|229028090|ref|ZP_04184240.1| Alanine racemase [Bacillus cereus AH1271]
 gi|228733224|gb|EEL84056.1| Alanine racemase [Bacillus cereus AH1271]
          Length = 389

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 90/387 (23%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNITHIKNFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|238764111|ref|ZP_04625065.1| Alanine racemase 1 [Yersinia kristensenii ATCC 33638]
 gi|238697648|gb|EEP90411.1| Alanine racemase 1 [Yersinia kristensenii ATCC 33638]
          Length = 359

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 172/367 (46%), Gaps = 18/367 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  + A  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQVRRMAPQSRLIAVVKANAYGHGLLETAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I       +     +  +        +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPVLVANRIETAVHSIEQLEALEAANLSAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S  + + Q   I+SH + AD+P       QL+ F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACRNIIQPVNIMSHFSRADEPLVDTTRQQLDCFDTF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARI 242
            +   G + S+++S GILL P  H    RPGI LYG +           +   +  ++ +
Sbjct: 182 AADKPG-KQSISASGGILLWPEAHRDWVRPGIILYGVSPMDEPYASHFDLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G   ++
Sbjct: 241 IAVREHKAGEPVGYGGTWISERDTRLGVVAIGYGDGYPRSA-----------PSGTPMWL 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V I+G+++MDM   D+      +VGD + ++G ++ ++ +A  +G + Y+L+ ++ 
Sbjct: 290 NGREVGIVGRVSMDMISVDLGPEAIDKVGDEVLLWGAELPVEKIAARTGISAYELITKLT 349

Query: 363 TRYAKFY 369
           +R A  Y
Sbjct: 350 SRVAMEY 356


>gi|299538299|ref|ZP_07051584.1| alanine racemase [Lysinibacillus fusiformis ZC1]
 gi|298726501|gb|EFI67091.1| alanine racemase [Lysinibacillus fusiformis ZC1]
          Length = 373

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 31/386 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M + +F R     IDL A++ N  ++   L  N +  AVVK NAYG G   +A A   AG
Sbjct: 1   MKTQQFFRPTKAIIDLQAIQQNVKNLKEFLRPNVQIIAVVKANAYGHGDVAVARAALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V + +E + +R +  +  I +L               +I    +   +   + L+
Sbjct: 61  ATVLAVATPDEALHIRAHFEEPDILILGASPVSFAPYAAQQRIILTAFADDWMQQAASLL 120

Query: 117 -SCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
               +     +++D+G  R+G+   QE L+      + +  +L  I +H A AD+  +  
Sbjct: 121 VDEALPLRLHIKIDSGMGRIGIRSEQELLELYQTIQSTENMELDGIFTHFATADEEDTLH 180

Query: 175 NSVQLERFRTLISHYKGIEASLASS---SGILLGPNYHFQLTRPGISLYGGTDKI----N 227
              Q++ F   ++        + +S   + ++  P+  +   R GIS+YG +        
Sbjct: 181 FDQQVQFFEKCLAVIPNKPRLVHASNTAASLVKDPHLQYDAVRFGISMYGLSPSAYVTSI 240

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
              P+    + E+ ++ +++  +G+ V YG       D  I    IGYADG    L G  
Sbjct: 241 LPFPLLPAFSLESELVHVKQIKSGDSVGYGAIYVAPTDMWIGTIPIGYADGVIRKLGGQ- 299

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      +  I G  +PI+G+I MD  M  +  +    +G+ + + G      + +
Sbjct: 300 -----------EVLIDGQRMPIVGRICMDQCMVALPKAYD--IGEKVTLIGRQGNTGVSI 346

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           D+ A    T NY++   I TR  + Y
Sbjct: 347 DEWATKLETINYEIPCIITTRVPRIY 372


>gi|227112420|ref|ZP_03826076.1| alanine racemase [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 360

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 105/374 (28%), Positives = 173/374 (46%), Gaps = 23/374 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       I+  AL++N   +  L+  ++  A+VK NAYG G    A    +     +
Sbjct: 1   MKT---ATAVINRRALRHNLQRIRQLAPGSQVVAIVKANAYGHGMIDAAHTFSD--ADCY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  + E + LR       I +L G     +  ++ +  L   + S  QL    + ++  
Sbjct: 56  GVARLSEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSPEQLAALEQ-VTLP 114

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
              P  +++D+G +RLG+  + A  F    +  + + Q   I+SH   AD+P +     Q
Sbjct: 115 QPIPVWMKLDSGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQ 174

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
           L  F        G + S+A+S GILL P  H    RPGI LYG +   N+       Q  
Sbjct: 175 LACFDAFTQGKPGAQ-SIAASGGILLWPQSHRDRVRPGIILYGVSPLDNEDAAHFGFQPA 233

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  + +I +R+  AGE V YGG     R++ + V A+GY DGYP               
Sbjct: 234 MTFTSHLIAVREHNAGEAVGYGGTWTSPRNTRLGVVAVGYGDGYPR-----------CAP 282

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G    I G  VP+ G+++MDM   D+  +   +VGD + ++GP + ++ +A  +G + Y
Sbjct: 283 AGTPVLINGREVPLSGRVSMDMITVDLGPNAQDKVGDEVILWGPTLPVERIAAHTGASAY 342

Query: 356 DLLVRIGTRYAKFY 369
           +L+ R+  R A  Y
Sbjct: 343 ELITRLTQRTALEY 356


>gi|222153645|ref|YP_002562822.1| alanine racemase [Streptococcus uberis 0140J]
 gi|254802390|sp|B9DVI3|ALR_STRU0 RecName: Full=Alanine racemase
 gi|222114458|emb|CAR43287.1| alanine racemase [Streptococcus uberis 0140J]
          Length = 368

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 165/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +      +DL A+++N  ++   +S   +T AVVK NAYG G  ++A A+    V
Sbjct: 1   MISSLHRPTVATVDLQAIRDNIKAVQEHISSTTKTFAVVKANAYGHGAIQVAKAVDEE-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  I   +  +  + ++   ++S   L        
Sbjct: 60  DAFCVSNLDEALELRQAGIEKDILILGVILANEIPLAIEHSITITVASNEWLESAKACQK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   E  +       K    +  I +H A AD+ ++     
Sbjct: 120 DLAQLHVHVKVDSGMGRIGVRSLEEANQLIAGLTKSGAHVDGIFTHFATADEENTDKFHQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L++           ++S+  L   +  F   R GI +YG       +N  +P+
Sbjct: 180 QLAFFTDLVNALAIKPELVHASNSATSLWHSDTIFNAVRLGIVIYGLNPSGKTLNLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  +R++ I+K  AG  V YG       +  +    IGYADG+   + G       
Sbjct: 240 KPALSLSSRLVHIKKIKAGNTVGYGATYTAKTEEYVGTLPIGYADGWTRDMQGYS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    I G++  I+G+++MD     +  +    +G  + + G +    I   D+A 
Sbjct: 295 -------VIIDGHLCEIIGRVSMDQLTVRLPKAFD--IGQEVTLIGQEGHQMISATDIAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRIPRHY 366


>gi|30018501|ref|NP_830132.1| alanine racemase [Bacillus cereus ATCC 14579]
 gi|218233448|ref|YP_002365079.1| alanine racemase [Bacillus cereus B4264]
 gi|228956674|ref|ZP_04118465.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229041138|ref|ZP_04189897.1| Alanine racemase [Bacillus cereus AH676]
 gi|229107913|ref|ZP_04237544.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|229125746|ref|ZP_04254775.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|229143037|ref|ZP_04271474.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|229148639|ref|ZP_04276893.1| Alanine racemase [Bacillus cereus m1550]
 gi|29894041|gb|AAP07333.1| Alanine racemase [Bacillus cereus ATCC 14579]
 gi|218161405|gb|ACK61397.1| alanine racemase [Bacillus cereus B4264]
 gi|228634897|gb|EEK91472.1| Alanine racemase [Bacillus cereus m1550]
 gi|228640426|gb|EEK96819.1| Alanine racemase [Bacillus cereus BDRD-ST24]
 gi|228657719|gb|EEL13528.1| Alanine racemase [Bacillus cereus BDRD-Cer4]
 gi|228675536|gb|EEL30749.1| Alanine racemase [Bacillus cereus Rock1-15]
 gi|228727200|gb|EEL78398.1| Alanine racemase [Bacillus cereus AH676]
 gi|228803012|gb|EEM49839.1| Alanine racemase [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 389

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|83311194|ref|YP_421458.1| alanine racemase [Magnetospirillum magneticum AMB-1]
 gi|82946035|dbj|BAE50899.1| Alanine racemase [Magnetospirillum magneticum AMB-1]
          Length = 409

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 135/359 (37%), Positives = 194/359 (54%), Gaps = 14/359 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L ID+ A+  NW  ++AL   A  +AVVK + YGLG ++IAPAL+ AG + FFV  V EG
Sbjct: 49  LTIDVAAIVANWKRLSALVAPAEASAVVKADCYGLGMDRIAPALFAAGCRSFFVACVNEG 108

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA-LQ 127
           + LR   P A I VL G   G E       LIPV++S+ Q+T ++     G   P   + 
Sbjct: 109 IALRRLLPGAMIHVLSGPMGGDEAEFAAHGLIPVLNSLSQMTGWASFAKKGSGAPAVAIH 168

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +RLGLS  E              +  L++SHLACADD  S +N+ QL   R L S
Sbjct: 169 IDTGMSRLGLSEPELERLAAKPEILAAMRPILVMSHLACADDSDSPMNARQLTTLRRLAS 228

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           H   +  S+A+SSGI LG  +H  + RPG +LYG      + +PM  V+  E +I+ +R 
Sbjct: 229 HLPALPQSIAASSGIFLGRGFHLGMVRPGAALYGLNPMPGRPNPMSQVIKLEGKIVQVRD 288

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             + + V YG   ++     +A+ A+GYADG+  +LS             G G I G  V
Sbjct: 289 VDSPQTVGYGATHRVEGKRRLAIVAVGYADGWFRSLSNR-----------GHGMIGGVKV 337

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           P++G+++MD+T FD+TD    S   G  IQ+ GP    D +A  + T  Y++L  +G R
Sbjct: 338 PVVGRVSMDLTTFDVTDVPVESAHPGGLIQLIGPGYGPDHLAAEADTIGYEVLTALGRR 396


>gi|238022968|ref|ZP_04603394.1| hypothetical protein GCWU000324_02890 [Kingella oralis ATCC 51147]
 gi|237865776|gb|EEP66914.1| hypothetical protein GCWU000324_02890 [Kingella oralis ATCC 51147]
          Length = 351

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L++N+  + AL GN +  AV+K NAYG G  + A AL++A    F V  
Sbjct: 2   RPLTCEIRLDYLRDNYQYLKALHGN-KLLAVMKANAYGHGAVQCARALHDA-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE V+LR       I VL G+    +        +  +                     
Sbjct: 60  LEEAVELREAGITKPIVVLEGVFQAADYAAVAEYRLWPVVHCQAQLEGLLAFDWREPATV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                      + +SH ACAD+    +  +QLE F  
Sbjct: 120 WLKMDSGMHRTGFFPHNYAAAFAALRQSGKVGEIVKMSHFACADETERGMTQMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             +   G E SLA+S+ I+  P       R G++LYG       S  ++ V+  ++ +  
Sbjct: 180 ACAGLDGAE-SLANSAAIMAYPEARRDWGRAGLALYGVDPFGAFSGSLKPVMRLKSEVFA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R     E + YG      R + +   A GYADGYP                     I G
Sbjct: 239 ERVLQPHEPIGYGASFYTKRSTRVGAVAGGYADGYPRRA-----------ASDTPVAIDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ++G+I+MDM   D+     + VG  +++FG  I +++VA A+GT  Y++L  +  R
Sbjct: 288 VRSRLIGRISMDMLTVDL-QQADMGVGSEVELFGDIISVNEVAAAAGTIAYEVLCNV-KR 345

Query: 365 YAKFYT 370
             + Y+
Sbjct: 346 AKRVYS 351


>gi|221212666|ref|ZP_03585643.1| alanine racemase [Burkholderia multivorans CGD1]
 gi|221167765|gb|EEE00235.1| alanine racemase [Burkholderia multivorans CGD1]
          Length = 373

 Score =  272 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 159/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AVVK NAYG G E+I PAL         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPALAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + + + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELVERHRLTVAVHCDEQLDLLIAAKPQQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QL +F  
Sbjct: 121 QLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADEGE---VDWQLAQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E +L++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++   AGE V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|184158698|ref|YP_001847037.1| alanine racemase [Acinetobacter baumannii ACICU]
 gi|183210292|gb|ACC57690.1| Alanine racemase [Acinetobacter baumannii ACICU]
 gi|322507492|gb|ADX02946.1| Alanine racemase 1, biosynthetic [Acinetobacter baumannii 1656-2]
 gi|323518612|gb|ADX92993.1| alanine racemase [Acinetobacter baumannii TCDC-AB0715]
          Length = 356

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 170/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKDPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 183 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 243 LNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|161870495|ref|YP_001599667.1| alanine racemase [Neisseria meningitidis 053442]
 gi|161596048|gb|ABX73708.1| alanine racemase [Neisseria meningitidis 053442]
          Length = 422

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            NEF+R   ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     
Sbjct: 67  RNEFMRPLNVQIRLGNLRHNYQILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADG 124

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +++EG++LR       I +L G+    E    +   +                   
Sbjct: 125 FAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWK 184

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+
Sbjct: 185 KPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQM 244

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E F       +G E SLA+S+ IL  P       R G++LYG +        ++ V+   
Sbjct: 245 EAFDLGTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLS 303

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            RI   R       + YG     ++ + + + A GYADGYP                   
Sbjct: 304 TRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSP 352

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +  ++G+++MDM   ++ D+    +G  ++++G  I ++ VA A+GT  Y+L+ 
Sbjct: 353 VAVDGKLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTININTVAEAAGTIPYELMC 411

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 412 NI-KRAKFTY 420


>gi|313905464|ref|ZP_07838828.1| alanine racemase [Eubacterium cellulosolvens 6]
 gi|313469648|gb|EFR64986.1| alanine racemase [Eubacterium cellulosolvens 6]
          Length = 380

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 98/388 (25%), Positives = 169/388 (43%), Gaps = 31/388 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M        ++ L A+++N        G   +  AVVK NAYG G  ++A  L    V  
Sbjct: 1   MEEYLRTYAEVSLAAIEHNIDEARKRIGSGTKLLAVVKANAYGHGAVRVARHLQEK-VDF 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V ++EEG++LR       I  L  I P + + +   ++ P I  +      S+  +  
Sbjct: 60  FAVATLEEGLELREAGIHKPILDLGYISPAEYEDMILADIRPSIYHLEDAEILSRKAASL 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSV 177
           G S    + +DTG  R+G  + E         +     ++  + +HL+CAD         
Sbjct: 120 GRSAKLHIALDTGMTRIGFQVTEGDADQIREISLMPNLEIEGMFTHLSCADMVDKTYCDG 179

Query: 178 QLERFRTLIS----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKIN-- 227
           Q E++ T+++        I      +S  ++  +    + + + R GI+ YG        
Sbjct: 180 QFEKYDTMLAMLEERNVRIPIRHVCNSAAVMEFDIDEKHRYDMVRTGITNYGIYPSEEVK 239

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD-SLIAVAAIGYADGYPLTLSG 285
            ++  +   +  +A +I +++   G  VSYG      +  + IA  +IGYADGYP  LS 
Sbjct: 240 KENMNLIPALAWKAHVIHVKEVAPGIGVSYGATFVTQKPVTKIATVSIGYADGYPRALS- 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----I 341
                       G+  I G   PILG++ MD  M D+++   + V D + + G D    I
Sbjct: 299 ----------SKGRVLIHGKTAPILGRVCMDQMMVDVSEIPDVAVEDVVTLVGRDGEECI 348

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++++A  SG  NY++L  I  R  + Y
Sbjct: 349 SIEEIADPSGRFNYEMLCDISPRVRRVY 376


>gi|229188510|ref|ZP_04315554.1| Alanine racemase [Bacillus cereus ATCC 10876]
 gi|228594973|gb|EEK52748.1| Alanine racemase [Bacillus cereus ATCC 10876]
          Length = 389

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|296445363|ref|ZP_06887321.1| alanine racemase [Methylosinus trichosporium OB3b]
 gi|296257124|gb|EFH04193.1| alanine racemase [Methylosinus trichosporium OB3b]
          Length = 380

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 133/362 (36%), Positives = 193/362 (53%), Gaps = 12/362 (3%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL AL  NW  + A +  A  AAVVK +AYG+G E    AL  AG + FFV +  EG +
Sbjct: 25  VDLAALVANWRLLAARAPGADCAAVVKADAYGIGLEPATRALAAAGCRTFFVATAGEGER 84

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQL-TFYSKLMSCGVSHPYALQVD 129
           LR   P+A ++VL G+  G    +    L PV++S+ ++  + +   S G   P ALQ+D
Sbjct: 85  LRAVAPRAIVYVLEGLPQGGAFTLAAARLRPVLASLEEIGEWGAFGRSIGRRLPAALQLD 144

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           TG NRLGLS +EA      + + +L   +L++SH  CA  P    N+ Q+  F   +  +
Sbjct: 145 TGMNRLGLSPREAPAAAAAAQDIEL---TLVMSHFICAQWPDDPRNARQIAAFEAALGCF 201

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKAL 249
            G  ASL +SSG+ L    H  L RPG +LYGG       +PM+ VV  EA ++ +R+  
Sbjct: 202 PGAPASLCNSSGVFLSEKPHHDLLRPGYALYGGNPTPLCPNPMRPVVRLEASVLAVREIA 261

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
           AGE V Y G     R + +A   +GY DG P   S      S     G +  I GY  P+
Sbjct: 262 AGETVGYDGVWTAARPTRLATLGLGYGDGLPAGAS------SGPGRAGAEAVIGGYRCPL 315

Query: 310 LGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           +G+++MD  M D+TD     +  G   +I G  I +D++A  SGT  Y++L R+G RY +
Sbjct: 316 VGRVSMDFVMLDVTDIPEAIVHRGASAEILGETIGVDELAARSGTIGYEILTRLGRRYER 375

Query: 368 FY 369
            Y
Sbjct: 376 RY 377


>gi|294668465|ref|ZP_06733565.1| hypothetical protein NEIELOOT_00380 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309618|gb|EFE50861.1| hypothetical protein NEIELOOT_00380 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 352

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             LR  I L  L+ N+ ++  L G  +  AV+K +AYG G  + A AL +     F V  
Sbjct: 2   RPLRADIRLDRLRENYQTLKRLHGG-KMLAVLKADAYGHGAVRCAHALADL-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE V+LR       I +L G+    E    D   +  + +                   
Sbjct: 60  LEEAVELRTQGITQPIVLLEGVFDAAEYAAVDEYGLWPVVADQWQLETLLKHEWKTPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                      + ISH ACAD+    +  +Q+E F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYASAYTALAQSGKVSDIVKISHFACADEEERGMTEMQIEAFDM 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             +   G E SLA+S+ +L  P       R G++LYG    +     ++ V+   +R+  
Sbjct: 180 GCAGLAGEE-SLANSAAMLAYPQARRDWGRAGLALYGIDPFLENDPSIKPVMRLVSRVFA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R     E + YG      R + + +AA GYADGYP                G    + G
Sbjct: 239 ERVLQPHEPIGYGASFYTKRSTRVGLAACGYADGYPRRA-----------ATGTPVAVNG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ILG+++MDM   ++ D+    VG  ++++G  + +++VA A+GT  Y+LL  +  R
Sbjct: 288 RRSRILGRVSMDMLTVELADTHE-GVGSEVELWGDTVSINEVAAAAGTIAYELLCNV-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFVY 350


>gi|332873690|ref|ZP_08441633.1| alanine racemase [Acinetobacter baumannii 6014059]
 gi|332738078|gb|EGJ68962.1| alanine racemase [Acinetobacter baumannii 6014059]
          Length = 358

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 170/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 10  IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 67

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 68  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 128 LNSGMNRLGFKDPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 184

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 185 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 245 LNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDG 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 294 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 352

Query: 365 YAK 367
             +
Sbjct: 353 PVR 355


>gi|331002036|ref|ZP_08325556.1| alanine racemase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330411832|gb|EGG91237.1| alanine racemase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 392

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 166/384 (43%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S      K+DL A+K+N       L  N + AAVVK + YG G   ++  + +  V  
Sbjct: 1   MDSYRRAYAKVDLDAIKHNLMITKQALKENMKLAAVVKADGYGHGSVPVSLHIKDI-VDF 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
           F V ++EEG+ LR +     I +L  I     K     ++   + ++ Q    +      
Sbjct: 60  FCVATLEEGINLRYHGITKPILILACIPRSSYKESIVFDIRESVFTLEQAKKINDEAKEM 119

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      + +DTG NR+G    +E+ D           ++  I +H   AD+        
Sbjct: 120 GKKMSIHIAIDTGMNRIGFKPTKESADIIKTINEMNNIEIEGIFTHFHSADEIDLTSAKR 179

Query: 178 QLERFRTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KS 229
           Q E F   +      GIE  +    +S+ I+        + R GI++YG +       KS
Sbjct: 180 QEELFLEFLDMLRNMGIEPKITHASNSAAIVNNIGTQLDMVRCGITMYGVSPSNEVNLKS 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              +  ++  + I  I++  AGE VSYG   K  +D  IA  + GYADGYP  LS     
Sbjct: 240 FDYRPALSIYSTITYIKEIKAGECVSYGAIFKAEKDMNIATISFGYADGYPRDLSN---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G   I G    ILG+I MD T+ D+++   +E+GD + I G      I +++
Sbjct: 296 -------KGYVLIHGVKCRILGRICMDQTIVDVSNIPKVEIGDTVVILGESEDSKITVEE 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +   S T +Y+ +  I  R  + Y
Sbjct: 349 LTKDSNTFSYEFICGINKRVPRLY 372


>gi|289641127|ref|ZP_06473295.1| alanine racemase [Frankia symbiont of Datisca glomerata]
 gi|289509068|gb|EFD29999.1| alanine racemase [Frankia symbiont of Datisca glomerata]
          Length = 442

 Score =  272 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 99/388 (25%), Positives = 159/388 (40%), Gaps = 32/388 (8%)

Query: 1   MHSNE---FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +          +DL A++ +  ++ A +GNA T AVVK + YG G    A A   AG 
Sbjct: 1   MTTQSEGLRACAIVDLDAVRASVATLVARAGNAATMAVVKSDGYGHGMSACARAAVEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
               V  +EEG+ LR       +F                ++    S+   L   +    
Sbjct: 61  SWLGVAVIEEGLALRAAGFTVPVFAWLTAPGEPLADALAADIDLSASAPWMLAEIAAAAR 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTH---NSFNKKLGQLSLIISHLACADDPSSH 173
             G      L+ DTG  R G +  +             + L +++ + SHLA AD P   
Sbjct: 121 HTGRRARVHLKADTGLGRGGATEADWPSLCDAAAALAAEDLIEVTGVWSHLAFADSPGHP 180

Query: 174 VNSVQLERFRT--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKI-- 226
               Q+ RF     I+   G+      LA+S+  L+ P+  F + RPGIS+YG +     
Sbjct: 181 TVRGQIGRFADAVTIAEKTGLRPQVRHLANSAATLVSPDARFDMVRPGISVYGLSPGPQV 240

Query: 227 --NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
               +  ++  +T  AR+ L ++  AG  VSY  +      S + +  +GYADG P    
Sbjct: 241 GSPAALGLRPAMTLTARLALAKRVPAGSGVSYAHRYTTAVASTLGLVPLGYADGVPRAAG 300

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----D 340
                         +  + G    I G + MD  + D+ D   ++ GD + +FG     +
Sbjct: 301 NT-----------AEVLLAGRRRRIAGTVCMDQFVVDVGDDP-VQAGDQVILFGSGEHGE 348

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKF 368
               D A A GT NY+++ R+G R  + 
Sbjct: 349 PTAQDWADALGTINYEIVTRVGVRVPRV 376


>gi|258543551|ref|YP_003188984.1| alanine racemase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634629|dbj|BAI00605.1| alanine racemase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637685|dbj|BAI03654.1| alanine racemase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640739|dbj|BAI06701.1| alanine racemase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643794|dbj|BAI09749.1| alanine racemase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646849|dbj|BAI12797.1| alanine racemase [Acetobacter pasteurianus IFO 3283-26]
 gi|256649902|dbj|BAI15843.1| alanine racemase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652892|dbj|BAI18826.1| alanine racemase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655946|dbj|BAI21873.1| alanine racemase [Acetobacter pasteurianus IFO 3283-12]
          Length = 381

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 122/365 (33%), Positives = 185/365 (50%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L ++L+A+  N+  + +  G    AAVVK +AYGLG  ++AP L  AG + FFV  V+EG
Sbjct: 24  LTVNLSAIAENYRYLKSRLGKTACAAVVKADAYGLGVAQVAPVLEKAGAEHFFVAHVDEG 83

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           + LR   +P   + VL+G  P   ++    NL PV++S+ Q+                A+
Sbjct: 84  LALRPFLSPHTSVTVLHGPRPDAAEVCVRNNLRPVLNSLEQVAVLRDLAAKMDKPLDVAI 143

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +R GLS  +      +    K   +SL++SHLACAD P +  N++Q ERF    
Sbjct: 144 QLDTGMSRFGLSEADIHKLVASPELLKGLFVSLVMSHLACADTPQNPANTMQRERFEAYA 203

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                   SL++SSGI LGP +HF L RPG +LYG   +    +P++ VV  +A I+ IR
Sbjct: 204 RILPQAALSLSASSGIFLGPQFHFDLVRPGAALYGVAPQNEGDNPLKPVVGLQAHILQIR 263

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V YG   +      +A  A GY               + +    G  + KGY 
Sbjct: 264 HLSKGDRVGYGLTWQAHGPCRVATIATGY-----------ADGFARAGAAAGCAWYKGYR 312

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PILG+I+MD    D++      +E    +++      +D VA A GT  Y++L  +G R
Sbjct: 313 LPILGRISMDSMTVDLSAVPEGLLEEDSMVELLNESYGVDAVAKAEGTIGYEVLTSLGRR 372

Query: 365 YAKFY 369
           Y + Y
Sbjct: 373 YHRVY 377


>gi|217965017|ref|YP_002350695.1| alanine racemase [Listeria monocytogenes HCC23]
 gi|254802368|sp|B8DG73|ALR_LISMH RecName: Full=Alanine racemase
 gi|217334287|gb|ACK40081.1| alanine racemase [Listeria monocytogenes HCC23]
 gi|307570423|emb|CAR83602.1| alr [Listeria monocytogenes L99]
          Length = 368

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 157/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++     
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+  ++EA        +    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTVEEARQIETTIASDNQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVGGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGEDNGNAITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|160939251|ref|ZP_02086602.1| hypothetical protein CLOBOL_04145 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438214|gb|EDP15974.1| hypothetical protein CLOBOL_04145 [Clostridium bolteae ATCC
           BAA-613]
          Length = 396

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 99/385 (25%), Positives = 165/385 (42%), Gaps = 28/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+S   +   IDL A+++N  +M  +L  +A    VVK + YG G   +A A  +  V+ 
Sbjct: 1   MNSYSRVYASIDLDAVESNMRAMKDSLPPSASMIGVVKTDGYGHGAVPVARA-IDPYVKG 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           + V +++E + LR +  Q  I VL   H  + + +   ++ P +    +    S+     
Sbjct: 60  YAVATIDEAIILRRHGIQKMILVLGVTHESRFEDLVRYDIRPAMFRYEEAGKLSETAVKN 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      L VDTG +R+G++  EA  D            +  + +H A AD+        
Sbjct: 120 GARANIHLAVDTGMSRIGMTPDEASADEAARISRLPGICIEGMFTHFARADEADKAFYEA 179

Query: 178 QLERFRTLISHYK------GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
           Q +++R              I     S+  +    +    + R GIS+YG       +  
Sbjct: 180 QYKKYREFCEMLCSRGVDIPIRHCSNSAGIVEGLDSNGLDMVRAGISIYGLYPSDEVARD 239

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +   +  ++ I  I+    G  VSYGG     R   +A   +GY DGY  +LS    
Sbjct: 240 RVKLVPAMELKSFITYIKTIGPGTAVSYGGTFVADRPMRVATIPVGYGDGYLRSLSN--- 296

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G    ILG+I MD  M D+TD    E GD + + G D    I ++
Sbjct: 297 --------KGAVLIRGKRAEILGRICMDQFMADVTDIPEAEEGDQVTLIGRDGEECITVE 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A  SG  +Y+++ +IG R  + Y
Sbjct: 349 ELAALSGGFHYEIICQIGKRVPRVY 373


>gi|229055082|ref|ZP_04195513.1| Alanine racemase [Bacillus cereus AH603]
 gi|228721266|gb|EEL72791.1| Alanine racemase [Bacillus cereus AH603]
          Length = 389

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVEDAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A +D+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATSDEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTRTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       K  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------KVLVNGERVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|254776802|ref|ZP_05218318.1| alanine racemase [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 391

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +  A+  AVVK + YG G  + A A   AG  +  V +V
Sbjct: 16  LAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAALAAGAAELGVATV 75

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +           +      +   +SS  Q     + +   G +   
Sbjct: 76  DEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDELLAAVRDTGRTATV 135

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +          +  ++      ++SH+  AD P++ VN VQ +R
Sbjct: 136 TVKVDTGLNRNGVPPAQYPSMLTALRRAVAEEAIVPRGLMSHMVYADQPANPVNDVQAQR 195

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++  +        A L++SS  +  P+  F + RPGI++YG +         +   
Sbjct: 196 FTDMLAQARAQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLSPVPELGDMGLVPA 255

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L G          
Sbjct: 256 MTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRSLGGRL-------- 307

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 308 ---QVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWADLL 364

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 365 GTIHYEVVTSPRGRITRTY 383


>gi|115352122|ref|YP_773961.1| alanine racemase [Burkholderia ambifaria AMMD]
 gi|115282110|gb|ABI87627.1| alanine racemase [Burkholderia ambifaria AMMD]
          Length = 356

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++   VVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWTVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIILYGASPSGLSADIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAPAQMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNTLPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|293374646|ref|ZP_06620961.1| alanine racemase [Turicibacter sanguinis PC909]
 gi|292646736|gb|EFF64731.1| alanine racemase [Turicibacter sanguinis PC909]
          Length = 377

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 148/375 (39%), Gaps = 21/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M        ++DL A+  N   +  L  N +  AVVK N YG G  +++     AGV + 
Sbjct: 1   MSFYRDTWAEVDLDAIVYNVQQIKKLHPNKKIFAVVKANGYGHGDVEVSRVALLAGVTNL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ ++E + LR    +A I VL         I    N+         ++     +    
Sbjct: 61  AVSGLDEALGLRKAGIEAPILVLGMTRLKDVSIAAQYNIALTAHDECWISKL-VELPLET 119

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L++D+G +RLGL+ +E +  T              +       D  +     Q++
Sbjct: 120 PVKVHLKIDSGMHRLGLTTKEKVKETFELLKAAPNVELEGVFTHMATADCDADYLEYQIK 179

Query: 181 RFRTLISHYK--GIEASLASSSGILLGPNYHFQL-TRPGISLYGGTD---KINKSHPMQT 234
            F +LI       I+     ++  LL   + F    R G+ LYG       I     ++ 
Sbjct: 180 TFESLIEDLDLSSIKYVHIENTATLLQREFEFDHAIRLGLGLYGINPDATFIPLEFDLKP 239

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   ++I  +++   G+ V YG       D  I V  IGYADG+     G +       
Sbjct: 240 ALKLYSKITQVKRINKGDKVGYGATYTAENDEWIGVVPIGYADGWIRAHQGRN------- 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  ++G    I+G++ MD  M  +     +E+G  + + G  + ++ VA   GT +
Sbjct: 293 -----VIVEGKECEIIGRVCMDQLMIRLPH--EVEMGTMVTLIGDGMPVERVADEIGTIS 345

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  +  R  + Y
Sbjct: 346 YEILCMLSDRVPRVY 360


>gi|21223124|ref|NP_628903.1| alanine racemase [Streptomyces coelicolor A3(2)]
 gi|6647408|sp|O86786|ALR_STRCO RecName: Full=Alanine racemase
 gi|3449257|emb|CAA20401.1| putative alanine racemase [Streptomyces coelicolor A3(2)]
          Length = 391

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 103/386 (26%), Positives = 166/386 (43%), Gaps = 34/386 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N  ++   +  A   AVVK +AYG G    A A   AG       + 
Sbjct: 15  RARAEIDLAALRANVRALRERAPGAALMAVVKADAYGHGAIPCARAAVAAGATWLGTATP 74

Query: 66  EEGVKLRLYTP----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           +E + LR   P      RI        G  +   +  L   +S++  +   +      GV
Sbjct: 75  QEALALRAAEPGLPDDVRIMCWLWTPGGPWREAVEARLDVSVSAMWAMEEVTGAARAAGV 134

Query: 121 SHPYALQVDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                L+ DTG  R G       +  +     +  + L +++ + SH ACAD+P     +
Sbjct: 135 PARVQLKADTGLGRGGCQPGADWERLVGAALRAEEEGLLRVTGLWSHFACADEPGHPSIA 194

Query: 177 VQLERFRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
            QL RFR +   +  +G+      +A+S   L  P+ HF L RPGI++YG +        
Sbjct: 195 AQLTRFREMTAYAEQRGLRPEVRHIANSPATLTLPDAHFDLVRPGIAMYGVSPSPEIGTP 254

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++ V+T  A + L+++   G  VSYG       ++ + +  +GYADG P   S   
Sbjct: 255 ADFGLRPVMTLAASLALVKQVPGGHGVSYGHHYTTPGETTLGLVPLGYADGIPRHASSS- 313

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKL 343
                     G   + G    + G+I MD  + D+      E G    +FGP    +   
Sbjct: 314 ----------GPVLVDGKWRTVAGRIAMDQFVVDLGGDRP-EPGAEAVLFGPGDRGEPTA 362

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +D A A+GT  Y+++ RIG+R  + Y
Sbjct: 363 EDWAQAAGTIAYEIVTRIGSRVPRVY 388


>gi|163938242|ref|YP_001643126.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|229165223|ref|ZP_04293015.1| Alanine racemase [Bacillus cereus AH621]
 gi|163860439|gb|ABY41498.1| alanine racemase [Bacillus weihenstephanensis KBAB4]
 gi|228618255|gb|EEK75288.1| Alanine racemase [Bacillus cereus AH621]
          Length = 389

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVEDAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A +D+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATSDEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTRTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       K  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------KVLVNGERVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|218895364|ref|YP_002443775.1| alanine racemase [Bacillus cereus G9842]
 gi|228963335|ref|ZP_04124500.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
 gi|218545448|gb|ACK97842.1| alanine racemase [Bacillus cereus G9842]
 gi|228796363|gb|EEM43806.1| Alanine racemase [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 389

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLRSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|113868091|ref|YP_726580.1| alanine racemase [Ralstonia eutropha H16]
 gi|123032940|sp|Q0K9V9|ALR_RALEH RecName: Full=Alanine racemase
 gi|113526867|emb|CAJ93212.1| alanine racemase [Ralstonia eutropha H16]
          Length = 373

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +  +R  AVVK NAYG G  ++  AL   G   F +  
Sbjct: 3   RPIHAVIHQPALANNLDIIRGKAPESRIWAVVKANAYGHGIRRVFAALR--GADGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR    Q  I +L G    Q+  + +   +       +     +          
Sbjct: 61  LNEAVLLRDLGWQGPILLLEGFFQPQDVAVIEQYRLTTAIHCDEQLRMLESARAKGPLAI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG NRLG            +         + ++H + AD       + Q+E F  
Sbjct: 121 QLKLNTGMNRLGFHPAAYRTAWERARAMPCVGSIVHMTHFSDADSARG--VAHQIEAFDA 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
             ++  G EASL++S+ +L  P  H    RPGI LYG +            +Q  ++  +
Sbjct: 179 ATANLPG-EASLSNSAAVLWHPQAHRAWVRPGIILYGASPTGRDADIAGTGLQPAMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG      R   I V A GYADGYP   SG   + +P        
Sbjct: 238 ELISVQDLQPGDTVGYGSLFTAERPMRIGVVACGYADGYPRHASGWGEQRAP-------V 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T      VG  + ++G  + +D+VA ASGT  Y+L+  
Sbjct: 291 LVDGVRTELVGRVSMDMLCVDLTPCPKARVGSPVTLWGQGLPIDEVAQASGTVGYELMCA 350

Query: 361 IGTRYA 366
           +  R  
Sbjct: 351 LAPRVP 356


>gi|254422201|ref|ZP_05035919.1| alanine racemase [Synechococcus sp. PCC 7335]
 gi|196189690|gb|EDX84654.1| alanine racemase [Synechococcus sp. PCC 7335]
          Length = 399

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 164/379 (43%), Gaps = 27/379 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              ++I+LTAL +N   + A+        +VVK +AYG G   +A     AG     V +
Sbjct: 17  RAWVEINLTALAHNVKVLKAMLPKGTDLLSVVKADAYGHGAVMVADVAIAAGTTWLGVAT 76

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV--ISSVPQLTFYSKLMSCGVSH 122
           V EG++LR       I V+  ++   E        +    ++    L F   L       
Sbjct: 77  VPEGIELRQAGIDVPILVMGAVNDSAEVRAIAHWNLQPVIVNPKQALVFSETLKDQRTPV 136

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +Q+DTG +RLG S Q A++F          +   + SH A AD     V  +Q +RF
Sbjct: 137 QVHIQLDTGMSRLGFSWQRAVEFVRFVRQLPYLETVGLCSHFATADSLDQTVMRLQHDRF 196

Query: 183 RTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           +  I+  K      +   +A+S+  L+ P +H+ + R G++ YG     +    ++  + 
Sbjct: 197 KQAIARLKQESLLPVRLHIANSAAALIAPTFHYDMVRMGLATYGLYPAPHLRDKLKVELQ 256

Query: 238 A----EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
                +ARI  I++  A   VSY  Q    +   IA+  IGYADG P  LS         
Sbjct: 257 PVLELKARITHIKEIDAHTGVSYSYQFIAPKSMKIAIVGIGYADGVPRILSN-------- 308

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                +  +    V  +G ITMD  + D++D  S++ GD + + G      +  D+ A  
Sbjct: 309 ---KMQVVVNEQRVNQIGAITMDQLIIDVSDLESVQEGDIVTLLGRTQYHCLHADEWAEL 365

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           +GT ++++L     R  + 
Sbjct: 366 AGTISWEILCGFKHRLPRV 384


>gi|302334971|ref|YP_003800178.1| alanine racemase [Olsenella uli DSM 7084]
 gi|301318811|gb|ADK67298.1| alanine racemase [Olsenella uli DSM 7084]
          Length = 386

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 95/390 (24%), Positives = 167/390 (42%), Gaps = 33/390 (8%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            N +  +++DL A++ N  +  AL     +    VK +AYG G  + A A+ ++G   F 
Sbjct: 8   KNRWAWVEVDLNAIRKNTRAFKALLEPRTQMMCAVKADAYGHGAVECAKAMASSGASQFA 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGV 120
           V +V+EGV+LR       I +L          +   +++P +  S   L +  + +S G 
Sbjct: 68  VATVDEGVELRRGGVAQPILMLNECPLEGIDDLLAFDVMPSVYTSGFALAYGERAVSLGK 127

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
              Y L +DTG +R+G+  ++ ++F       +  + +   +H A AD         Q  
Sbjct: 128 VGRYHLAIDTGMSRIGVLPEDVVEFRRMIDFHRGLECAGSFTHFATADAIGDWDFRQQSL 187

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQ 233
           RF   +S  +G           ++ G +L P  HF + R GI LYG            ++
Sbjct: 188 RFSDAVSALEGAGLEVGLVHCDNTPGTVLHPENHFDMCRVGIGLYGLQPSETTAPRIALE 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSP 292
             ++  AR+  +     GE V YG   ++ + +  IA   +GYADG   +LS        
Sbjct: 248 PAMSVRARVTRVVNPAVGEGVGYGFTYRVPKPNIQIATVPVGYADGLSRSLSN------- 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTM--FDITDS------LSIEVGDYIQIFG----PD 340
                    ++G     +G+I MD  M   D+ D        ++E GD + + G     +
Sbjct: 301 ----NMDVLVRGMRARQVGRICMDQFMFAVDVNDIRAYHPATAVERGDVVTLIGRDGDDE 356

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
           I  D++A    T NY+++     R  + +T
Sbjct: 357 ISADEMADRRDTINYEVVCNFSQRLDRIFT 386


>gi|262369752|ref|ZP_06063080.1| alanine racemase [Acinetobacter johnsonii SH046]
 gi|262315820|gb|EEY96859.1| alanine racemase [Acinetobacter johnsonii SH046]
          Length = 356

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 100/363 (27%), Positives = 167/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ NA+  ++VK NAYG G +    AL       F V  +EE ++
Sbjct: 8   IDSQALQYNLNRVKQLAPNAKIVSMVKANAYGHGVKDCLAALSE--TDAFGVACLEEALE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEK-IIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYALQ 127
           +R    +  I ++ G+    E   + +  L  VI    Q+ +    K           ++
Sbjct: 66  IRALGFEQPITLIEGVFSADEMSSVIEQKLECVIHHPQQVDWLLAHKTAYIAQKLKLWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E ++  +    +    +  +    A AD     +N  Q  +F  +  
Sbjct: 126 LNSGMNRLGFKVAEIINVINTLKAEGFTCVLAMHFANADAD---HPLNEQQRAQFLHIKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   NK      ++ V+T  A II 
Sbjct: 183 ACSPILASCCNSAAIFKWPELNFDFVRPGIMLYGASPFANKNAHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +++ +A+ +IGY DGYP                     I G
Sbjct: 243 LNTIQAGEGVGYGSHFVANQETELAIVSIGYGDGYPRAF-----------PKQNYVAING 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             V ++G++ MDM   D+T   + ++G  ++++G +  +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QAVAVVGRVAMDMIAIDVTGL-NAKLGTKVELWGENRLVDDVAEANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PIR 353


>gi|239637370|ref|ZP_04678352.1| alanine racemase [Staphylococcus warneri L37603]
 gi|239596970|gb|EEQ79485.1| alanine racemase [Staphylococcus warneri L37603]
          Length = 382

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 167/382 (43%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R   L IDL A+ +N+ + + L  N    +V+K N YGLG  +IA  L   G   
Sbjct: 2   SEKFYRSTYLNIDLNAILSNYQTFDKLHANKTVISVIKANGYGLGSVRIAQHLMENGASF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMS 117
           F V +++E ++LR++  +A+I +L  I P          +       S  + +  +    
Sbjct: 62  FAVATLDEAIELRMHGIKAKILILGVIPPKDINKAIQHRVALTVPSKSWLKESIKNISDE 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    L++DTG  RLG+  ++E  +               + +H ACAD+P   + +
Sbjct: 122 NEKALWLHLKLDTGMGRLGMKDVEEYKEVVDIISKYDQLVFEGVYTHFACADEPGDDM-A 180

Query: 177 VQLERFRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
            Q ++F+ L+   +        +S+G LL         R GISLYG         N    
Sbjct: 181 TQYQKFKELVEQVEKPHYIHTQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKENVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      + I+  +    G+ VSYG     T  + IAV  IGYADGY  ++ G      
Sbjct: 241 LKPSAQLVSEIVQTKTLNVGDSVSYGSTYTATEPTRIAVLPIGYADGYLRSMQGS----- 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                     + G    ++G++ MD TM  I D  +++VGD + +       +  ++ +A
Sbjct: 296 -------YVNVNGQQCEVIGRVCMDQTMVKIPD--TVKVGDKVILLDNHVDTEQSVEALA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +  R  + Y
Sbjct: 347 KQQNTINYEVLCNLSRRLPRIY 368


>gi|172060986|ref|YP_001808638.1| alanine racemase [Burkholderia ambifaria MC40-6]
 gi|171993503|gb|ACB64422.1| alanine racemase [Burkholderia ambifaria MC40-6]
          Length = 356

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++   VVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWTVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIMLYGASPSGLSADIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAPAQMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|289434154|ref|YP_003464026.1| hypothetical protein lse_0787 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289170398|emb|CBH26938.1| alr [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 368

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 150/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID +A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRSAIRENIKNEQNKLPKNVVVWAVVKANAYGHGIIEVAKTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       +   +      
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAHNNI---SLTIFREDWLDGVHLETPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++D+G  RLG+   +EA           +  L    +H A AD   +     QL +
Sbjct: 123 KVHLKIDSGMGRLGIRSAEEAEQIEAKIVQTDMFFLEGAYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F  ++   K     +   +S+  LL     F   R GIS+YG T  I    N    ++  
Sbjct: 183 FDAILKGLKSRPRFVHTANSAAALLQSQIGFDAVRFGISMYGLTPSIEIKSNLPFKLKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASG 351
              +  + G   PI+G++ MD T+  +      + G  + I     G  +  DD A    
Sbjct: 294 ---QVLVDGKKAPIIGRVCMDQTIIKLP--YEFQTGSKVTIIGMDHGNSVTADDAAKYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLTERIPRKY 366


>gi|227544692|ref|ZP_03974741.1| alanine racemase [Lactobacillus reuteri CF48-3A]
 gi|300909066|ref|ZP_07126529.1| alanine racemase [Lactobacillus reuteri SD2112]
 gi|227185338|gb|EEI65409.1| alanine racemase [Lactobacillus reuteri CF48-3A]
 gi|300894473|gb|EFK87831.1| alanine racemase [Lactobacillus reuteri SD2112]
          Length = 375

 Score =  271 bits (694), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 87/375 (23%), Positives = 150/375 (40%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +DL AL++N      +   N+R  AVVK NAYG G   +A     +G     V  ++E
Sbjct: 11  LIVDLDALRHNIQEQRKVLPENSRILAVVKANAYGNGLIPVAQTAMTSGASGLCVAILDE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCGVSHPY 124
            ++L     +A   VL         I         +  +  + Q    +++         
Sbjct: 71  ALELWDNGIEAMTLVLGITPVEDALIAAQAGVSLTVGSLDWLEQYHQLAQVAKPKKPLKV 130

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +D+G  R+G +            +    +   + +H A AD P  +  + Q++R+  
Sbjct: 131 HLGIDSGMGRIGFTEVATFKQAVKLLDSPEFEFEGMFTHFATADSPDENYFNQQVQRWHQ 190

Query: 185 LISHYKGIEASLA--SSSGILLGPN-YHFQLTRPGISLYGGTDK---INKSHPMQTVVTA 238
            ++    +   +   +S+  L           R GIS+YG       +  +  +Q V + 
Sbjct: 191 FVASLDELPPYVHMANSATGLWHREKITANTVRMGISMYGQNPSGRDLKLTLDLQPVSSL 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  +++  AG  VSYG      +D  +A   IGYADGYP  ++G             
Sbjct: 251 VSSISFVKQLKAGRSVSYGATYTAEQDEWLATLPIGYADGYPRCMTGY------------ 298

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
           K  + G    I G++ MD  M  +     +  G  + + G     +I   D+A  +GT N
Sbjct: 299 KVLVDGQFCDIAGRVCMDQMMIQLPKYYPV--GTPVVLMGKSGDQEITATDLAEQAGTIN 356

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  I  R  + Y
Sbjct: 357 YEILTNISNRVHRIY 371


>gi|153812757|ref|ZP_01965425.1| hypothetical protein RUMOBE_03164 [Ruminococcus obeum ATCC 29174]
 gi|149831117|gb|EDM86206.1| hypothetical protein RUMOBE_03164 [Ruminococcus obeum ATCC 29174]
          Length = 380

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/385 (22%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M   E ++  + L A+ +N+  M   ++   R  AV+K + YG G E I+  + +   + 
Sbjct: 1   MKKFERVKAVVSLDAIAHNFEEMKKNIADGTRIVAVIKADGYGHGAEAISRLIEDYEYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F   + EE ++L+    +  + +L  +     + +   ++   +         S     
Sbjct: 61  GFATATAEEAIQLKDAGIEKPVLILGLVFEEYFQELIRKDVRLTVCEYDVAKILSDEAVR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      + +DTG +R+G + + E+++           ++  + +H A AD+       
Sbjct: 121 QGRQVHIHIALDTGMSRIGFADKPESVEEIKKIAALPNVEIEGMFTHFARADETDKAPAV 180

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            QL+R+ T       +  +      ++S+GI+  P  +  L R GI++YG          
Sbjct: 181 EQLKRYLTFADLLEKAGVQIPLKHCSNSAGIIRMPEANLNLVRAGITIYGIYPSDEVERD 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +  ++ +  ++   AG  +SYGG      D  +A   +GYADGYP TLS    
Sbjct: 241 IVKLKPAMELKSHVAYVKDLPAGTAISYGGTFASENDLRVATIPVGYADGYPRTLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D+T    ++ GD + + G D    I ++
Sbjct: 298 --------KGWVLIHGQKAPILGRVCMDQFMVDVTHIPDVKHGDEVTLIGRDGDEFISIE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
                SG  +Y+    I  R  + Y
Sbjct: 350 TFGDMSGRFSYEFACDISKRVPRVY 374


>gi|332967677|gb|EGK06788.1| alanine racemase [Kingella kingae ATCC 23330]
          Length = 399

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 162/372 (43%), Gaps = 20/372 (5%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   L  +I L  L++N+  +    G  +  AVVK NAYG G  + A AL++     F 
Sbjct: 43  TTMRPLVCEIRLEHLRHNYRILKEKHGG-KLLAVVKANAYGHGAVRCALALHDI-ADGFA 100

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V  +EE ++LR       I +L G    QE  + +   +  +                 S
Sbjct: 101 VAFLEEAIELRENGITKPIVLLEGAFDAQEYHLIEQWNLWTVVHNQVQLEDLLAHDWKQS 160

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++D+G +R G                      + +SH ACADD    +  +Q+E 
Sbjct: 161 ATVWLKMDSGMHRAGFFPHHYAAAYTALSQSNKVGKIVKMSHFACADDAERGMTEIQIEA 220

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVT 237
           F    +   G E+SLA+S+ IL  P  H    R GI+LYG +   ++       ++ V+ 
Sbjct: 221 FDLACADLAG-ESSLANSAAILAYPEAHRDWGRAGIALYGISPFTDRAGCFDADLKPVMR 279

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +++   R     E + YG      R + + V A GYADGYP   +             
Sbjct: 280 LVSKVFAERVLQPHEPIGYGATFYTKRSTRVGVVACGYADGYPRATAN-----------D 328

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               I G    ++G+++MDM   ++TDS    +G  +++FG  + +++VA A+GT +Y++
Sbjct: 329 TPVAINGIRSRLIGRVSMDMITVELTDSH-AGLGSEVELFGDVVNVNEVARAAGTISYEI 387

Query: 358 LVRIGTRYAKFY 369
              I  R  + Y
Sbjct: 388 TCNI-KRATRVY 398


>gi|228906022|ref|ZP_04069914.1| Alanine racemase [Bacillus thuringiensis IBL 200]
 gi|228937533|ref|ZP_04100175.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970420|ref|ZP_04131075.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228976990|ref|ZP_04137398.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228782737|gb|EEM30907.1| Alanine racemase [Bacillus thuringiensis Bt407]
 gi|228789306|gb|EEM37230.1| Alanine racemase [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228822144|gb|EEM68130.1| Alanine racemase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228853625|gb|EEM98390.1| Alanine racemase [Bacillus thuringiensis IBL 200]
 gi|326938023|gb|AEA13919.1| alanine racemase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 389

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKAFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|119713697|gb|ABL97747.1| alanine racemase [uncultured marine bacterium EB0_41B09]
          Length = 360

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 21/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L+  IDL+AL +N   +  ++ N++  AV+K NAYG G  +   A+ +   +   + +
Sbjct: 2   RPLKAYIDLSALTSNLKLVKKIAKNSKVMAVLKANAYGHGLIESVKAIKS--AEGIAILT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE VK+R    +  I +L G+   ++    +   + ++        Y   ++       
Sbjct: 60  IEEAVKIRKAGFKNTILLLEGLFAAEDIHQAEKLNLNIVVHNDLQMDYLSDVTLKKPINV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG NRLG    +      N           +++H A AD+      + QL+ F  
Sbjct: 120 HLKINTGMNRLGFPPDQVDYLIENLNANPNVSEITLMTHFATADE--KEGITKQLDCFNR 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
            +++     +S+A+S+ +   P       RPGI LYG +   +   K   ++ V++  ++
Sbjct: 178 -VTNNYNFSSSVANSAALYKFPEARLDWVRPGIMLYGASPFEDISAKKIEVKPVMSLVSK 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II I+    G+ V YG       D  I + A GY DGYP                G   F
Sbjct: 237 IIAIQDIKKGQAVGYGNNFIAKDDMRIGIVACGYGDGYPRHAK-----------TGTPIF 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           +       +G+++MDM   D++      +G  ++++G  I +D+VA  SGT  Y+LL  I
Sbjct: 286 VHNKTTKTVGRVSMDMLYVDLSKIEKAVIGSKVEMWGNHISVDEVAKNSGTVGYELLCNI 345

Query: 362 --GTRYAKFY 369
              +R    Y
Sbjct: 346 SASSRVPLEY 355


>gi|170702444|ref|ZP_02893329.1| alanine racemase [Burkholderia ambifaria IOP40-10]
 gi|170132647|gb|EDT01090.1| alanine racemase [Burkholderia ambifaria IOP40-10]
          Length = 356

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++   VVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWTVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIILYGASPSGLSADIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAPAQMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|72163005|ref|YP_290662.1| alanine racemase [Thermobifida fusca YX]
 gi|123628791|sp|Q47LN3|ALR_THEFY RecName: Full=Alanine racemase
 gi|71916737|gb|AAZ56639.1| alanine racemase [Thermobifida fusca YX]
          Length = 374

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 152/381 (39%), Gaps = 26/381 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + F   +IDL A+  N   +   +  A+   VVK + YG G    A A    G       
Sbjct: 2   SSFAEARIDLDAISGNIALLAERAAGAQVMGVVKADGYGHGMVPAARAALAGGATWLGTA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
            + E ++LR     A I               D  +   I S+                 
Sbjct: 62  FIAEALQLRAAGIDAPILAWLVPPGEPLTEAIDAGIDLGIGSMWVINEVIDAARQARRQA 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQL 179
              L+VDTG NR G+   +           +      ++ + SHLACAD+P +   + QL
Sbjct: 122 RIHLKVDTGLNRGGIGPADWSAAAAALARAEAAGLLTVTGVFSHLACADEPDNPATTAQL 181

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-Q 233
           E F   +     +        +A+S+ +L  P+  F L RPGI+ YG +       P  +
Sbjct: 182 EAFHQALSVVDKAGLHPQVRHIANSAALLTRPDARFDLVRPGIATYGLSPIPGLDVPGLR 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A ++  ++   G  VSYG +    R++ +A+  +GY DG P   +         
Sbjct: 242 PAMTLSATLVGCKRVRPGSGVSYGYRYVTDRETNLALVPLGYGDGVPRAATNR------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                  F+ G    I G + MD  + DI D  ++  GD   +FGP    +    D A A
Sbjct: 295 ----APVFVAGRRRTIAGTVCMDQFVVDIGDD-TVTPGDRAILFGPGDHGEPTAQDWADA 349

Query: 350 SGTTNYDLLVRIGTRYAKFYT 370
             T +Y+++ RIG R  + YT
Sbjct: 350 LDTISYEIVTRIGRRVPRVYT 370


>gi|73541623|ref|YP_296143.1| alanine racemase [Ralstonia eutropha JMP134]
 gi|72119036|gb|AAZ61299.1| Alanine racemase region [Ralstonia eutropha JMP134]
          Length = 373

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 157/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+ NN   +   +  +R  AV+K NAYG G  ++   L   G   F +  
Sbjct: 3   RPIHAVIHQPAIANNLEVVRRHAPGSRVWAVIKANAYGHGIRRVFAGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V+LR    Q  I +L G    Q+  + +   +       +     +          
Sbjct: 61  LNEAVQLRDLGWQGPILLLEGFFQPQDVPLLEQYRLTTAVHCDEQLRMLESARPKGPLAI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG NRLG    +       +         + ++H + AD P     + Q+E F  
Sbjct: 121 QLKLNTGMNRLGFHPSQYRTAWERARAMPCVGSIVHMTHFSDADTPRGI--AHQIEAFDK 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             ++  G EASL++S+ +L  P  H    RPG+ LYG +    ++      +Q  ++  +
Sbjct: 179 ATANLPG-EASLSNSAAVLWHPEAHRAWVRPGVILYGASPTGREADIAGVGLQPAMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG      R   I V A GYADGYP   +G     +P        
Sbjct: 238 ELIAVQDLQPGDTVGYGSMFTADRPMRIGVVACGYADGYPRHATGWGEHRAP-------V 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+       +G  + ++G  + +DDVA ASGT  Y+L+  
Sbjct: 291 LVDGVRTQLVGRVSMDMLCVDLGPCPKARIGSPVTLWGQGLPIDDVAQASGTVGYELMCA 350

Query: 361 IGTRYA 366
           +  R  
Sbjct: 351 LAPRVP 356


>gi|75760683|ref|ZP_00740709.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228898981|ref|ZP_04063258.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
 gi|74491833|gb|EAO55023.1| Alanine racemase [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|228860655|gb|EEN05038.1| Alanine racemase [Bacillus thuringiensis IBL 4222]
          Length = 389

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLRSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|289450381|ref|YP_003475805.1| alanine racemase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184928|gb|ADC91353.1| alanine racemase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 386

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/383 (25%), Positives = 167/383 (43%), Gaps = 26/383 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           +  +    +I L  L NN  ++ A ++   +   V+K +AYG G    A  + + GV+  
Sbjct: 11  NKRDRCWAEISLANLANNIANIRAAIAPQVKIMGVIKGDAYGHGAVMTARTMIDCGVEYL 70

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-G 119
            V +V+E ++LR    +  I VL      +   I   +L   +  +      S       
Sbjct: 71  AVATVDEALELRGNDIKTPILVLGYTDVSRAMDIVANDLTQTVYELTLPEAMSLAAIKLN 130

Query: 120 VSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +    L+++TG  R+G+   E  ++F    +      +  I +H A AD+  S    +Q
Sbjct: 131 KTAKIHLKIETGMERIGIPADEHLIEFAKKLYALPNVDVEGIFTHFATADEAKSDFVKLQ 190

Query: 179 LERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            ERF+        + Y        +S+ IL  P YH  + R G  +YG         P Q
Sbjct: 191 FERFKKATEVLATAGYYPRYRHCCNSAAILRYPEYHLDMVRAGGLVYGFVPDFCHVQPGQ 250

Query: 234 TV--VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               ++  A+++LI+K   G  + Y  +   +RD  +A  ++GY DG    LS       
Sbjct: 251 YKPLMSLYAKVVLIKKVAKGTSIGYNRRFTASRDMWVATISVGYGDGIARALS------- 303

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFG----PDIKLDDV 346
                  +  + G+ V  +G I MD+ M DITD +  +++GD + +FG      +  D++
Sbjct: 304 ----EKLQVLLAGHRVRQVGNICMDLCMIDITDIVDQVKLGDQVTVFGAAATNSMTADEL 359

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT NY++ + I  R  +FY
Sbjct: 360 AALQGTINYEITININKRVPRFY 382


>gi|296501064|ref|YP_003662764.1| alanine racemase [Bacillus thuringiensis BMB171]
 gi|296322116|gb|ADH05044.1| alanine racemase [Bacillus thuringiensis BMB171]
          Length = 389

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      N    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSNVEIFAVVKANAYGHDYIPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITEPILVLGPSPPRDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSVMKFHINFDSGMGRIGIRERKELKEFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFELEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|118465728|ref|YP_883507.1| alanine racemase [Mycobacterium avium 104]
 gi|20141183|sp|Q9L888|ALR_MYCAV RecName: Full=Alanine racemase
 gi|166969418|sp|A0QKR9|ALR_MYCA1 RecName: Full=Alanine racemase
 gi|118167015|gb|ABK67912.1| alanine racemase [Mycobacterium avium 104]
          Length = 388

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +  A+  AVVK + YG G  + A A   AG  +  V +V
Sbjct: 13  LAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAALAAGAAELGVATV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +           +      +   +SS  Q     + +   G +   
Sbjct: 73  DEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDELLTAVRDTGRTATV 132

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +          +  ++      ++SH+  AD P++ VN VQ +R
Sbjct: 133 TVKVDTGLNRNGVPPAQYPSMLTALRRAVAEQAIVPRGLMSHMVYADQPANPVNDVQAQR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++  +        A L++SS  +  P+  F + RPGI++YG +         +   
Sbjct: 193 FTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLSPVPELGDMGLVPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L G          
Sbjct: 253 MTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRSLGGRL-------- 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 305 ---QVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWADLL 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 362 GTIHYEVVTSPRGRITRTY 380


>gi|20137236|sp|Q9FCV2|ALR_LACRE RecName: Full=Alanine racemase
 gi|9798537|emb|CAC03497.1| alanine racemase [Lactobacillus reuteri]
          Length = 375

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 149/377 (39%), Gaps = 25/377 (6%)

Query: 4   NEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL +D  A++ N    +  L   +   AVVK N YG G   +A     AG   F V
Sbjct: 6   HRASRLVVDAAAIRQNVKKEIERLDPQSELFAVVKANGYGHGLIPVARYTEQAGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR       I VL   +     +  + N+   +  V  LT  +  ++     
Sbjct: 66  AILDEALTLREAGFAEPILVLGITNVKWAALAAEKNVSLTVGDVEWLTKAAPQLTAEHPL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +DTG  R+G    + L+       N        + +H A AD+      ++Q++R
Sbjct: 126 KVHLALDTGMGRIGFQESDGLNQAAELLTNDPRFVFEGVFTHFATADEKDPTYFNLQVDR 185

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F  L+         +   +++  L     +  L R G+ +YG       +   + +Q  +
Sbjct: 186 FHKLVDTLPEKPRYVHVSNTATSLWHAACNGNLIRFGVGIYGMNPSGTVLEPPYDLQPAM 245

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+++   +    G  VSYG    + +D  I    IGYADGYP  L G           
Sbjct: 246 TLESQLSFSKLLKKGRSVSYGATYTVEQDEWIGTVPIGYADGYPRCLQGF---------- 295

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
                + G+   I+G++ MD  M  +        G  + +     G  I + D+A  +GT
Sbjct: 296 --HVLVDGHFCEIVGRVCMDQLMIRLPHEYPA--GTSVILAGKSQGKSISMTDIADYAGT 351

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++      R  + Y
Sbjct: 352 INYEITCGFTERIPRVY 368


>gi|332519358|ref|ZP_08395825.1| alanine racemase [Lacinutrix algicola 5H-3-7-4]
 gi|332045206|gb|EGI81399.1| alanine racemase [Lacinutrix algicola 5H-3-7-4]
          Length = 368

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/376 (27%), Positives = 159/376 (42%), Gaps = 21/376 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       L+IDL ALK+N   +   LS + +  AV+K  AYG    +IA  L N  V  
Sbjct: 1   MPKAHETTLEIDLKALKHNVGYIKSKLSKDTKFLAVIKAFAYGSDALEIAKYLENLNVDY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V    EGV LR    +  I VL+   P   K I +  L P I S   L  +  +    
Sbjct: 61  FAVAYTNEGVALRDAGIETPILVLHP-QPENFKTIIERCLEPNIYSQRVLKSFIAVAENL 119

Query: 120 V--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
              ++P  ++ ++G NRLG ++ +              ++  + SHLA ++D        
Sbjct: 120 KQNNYPIHIKYNSGLNRLGFNVNDIEAINKTLKQTAAIKVKSLFSHLAASEDLNEREFTL 179

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+  F+T  +         +    +++SGIL  P  HF + R GI LYG  +    +  
Sbjct: 180 NQIHNFKTFANTLTKALNYKVLLHQSNTSGILNYPEAHFSMVRCGIGLYGFANDNAYNKN 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +  + T +  I  I     GE + Y    K ++ +  A   IG+ADG             
Sbjct: 240 LIPIATLKTIISQIHTLNVGESLGYNRAFKASKITKTATLPIGHADGIGRQYGNG----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G  ++      I+G + MDM M D+TD    + GD + IFGP  K++ +     
Sbjct: 295 -----KGFVYVNEQKAYIVGNVCMDMIMVDVTDI-DCKEGDEVIIFGPKHKINSLTKTVD 348

Query: 352 TTNYDLLVRIGTRYAK 367
           T  Y+LL  +  R  +
Sbjct: 349 TIPYELLTAVSQRIKR 364


>gi|134103194|ref|YP_001108855.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915817|emb|CAM05930.1| alanine racemase [Saccharopolyspora erythraea NRRL 2338]
          Length = 378

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/380 (26%), Positives = 164/380 (43%), Gaps = 27/380 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H++    L+ID+ A+++N   + A +  ART  +VK + YG G   +A A   AG     
Sbjct: 5   HAHR-ADLRIDVDAIRHNVGVLAARAAGARTMVIVKSDGYGHGTVTVARAALEAGAGQIG 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGV 120
           V ++ E V LR     A +                  +    SSV       +     G+
Sbjct: 64  VAALGEAVALREAGITAPLMCWLYSRGDDFAPALRHGVELSASSVRGLREIAATAAELGL 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSV 177
                L++DTG  R G    E  +    +   +         + SHLACAD+        
Sbjct: 124 VARLHLKIDTGLCRSGCPEAEWPNLVDEAAKAEADGHVEVVAVWSHLACADELGHPSIDN 183

Query: 178 QLERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI-NKSHPM 232
           Q  RFR      +    G    LA+S+ +L  P+ HF++ RPGI++YG      +  H +
Sbjct: 184 QALRFRRAYERARTAGLGPIRHLANSAAVLTRPDLHFEMVRPGIAVYGLDPVPQDGDHGL 243

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T  + + L ++  AGE VSYG      R   +A+  +GYADG P TLSG  S    
Sbjct: 244 RPAMTFRSSVSLTKRVAAGESVSYGHTWTADRPVNLALVPVGYADGVPRTLSGRMS---- 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                   ++ G   P++G++ MD  +  + D   +  GD + +FGP    +    + A 
Sbjct: 300 -------VWLAGRRRPVVGRVCMDQLVV-LCDDDVVREGDEVILFGPGDRGEPTAAEWAD 351

Query: 349 ASGTTNYDLLVRI-GTRYAK 367
             GT +Y+++  +   R  +
Sbjct: 352 ELGTIHYEIVTGMYRPRVTR 371


>gi|328948124|ref|YP_004365461.1| Alanine racemase [Treponema succinifaciens DSM 2489]
 gi|328448448|gb|AEB14164.1| Alanine racemase [Treponema succinifaciens DSM 2489]
          Length = 383

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 100/390 (25%), Positives = 152/390 (38%), Gaps = 35/390 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R  I L  LKNN   +   L    +    VK +AYG G    A A   AG     V 
Sbjct: 2   RATRALIHLGNLKNNIIEIKKCLKPETKMCVAVKADAYGHGAVPCARAALEAGADYLSVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVS 121
           + EEGV LR     + I +L    P + + +    + P +     +  +  +        
Sbjct: 62  TYEEGVVLRNAGIASPILMLSLCSPDEVEEVVSAGITPFVFDEEYIELFSSACKKLGIKK 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQ 178
               L VDTG  R+G    EA +      N     L    +H A +D   +        Q
Sbjct: 122 FEVHLAVDTGMGRIGCLPSEAGNIALKIKNCGNLVLGGTATHFALSDCVSEKGKSYTKFQ 181

Query: 179 LERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTD--------- 224
            E F   I++ K +         A+S+  L  P+ H  + RPGI +YG            
Sbjct: 182 FENFLEAINNIKSVGINPGICHCANSATTLDSPDMHLDMVRPGIIVYGYYADEVSKEYLV 241

Query: 225 KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
              K+  ++ V+T E+ +  IRK   G+   YG + +   D+ + V  IGYADG+    S
Sbjct: 242 SKGKNVELKPVMTLESCVSSIRKFEKGKFAGYGCRWEAKSDTNVGVVPIGYADGWFRRFS 301

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD---- 340
                       G K  + G   PI G+I MD  M D+    + +  D   +FG      
Sbjct: 302 ----------ECGVKVAVNGKNYPICGRICMDQCMIDLGADCTAKRWDKAVLFGDSSDGA 351

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
               DD+A  +GT +Y++   I  R  + +
Sbjct: 352 LQTADDIAHLTGTISYEITCGISKRVPRVF 381


>gi|257456069|ref|ZP_05621272.1| alanine racemase [Treponema vincentii ATCC 35580]
 gi|257446527|gb|EEV21567.1| alanine racemase [Treponema vincentii ATCC 35580]
          Length = 375

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 104/380 (27%), Positives = 158/380 (41%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +  I L  LK N   +   L    +    VK +AYG G  + A A   AGV    V 
Sbjct: 2   RATKAIIHLDNLKYNITQIKQTLVPETKICLPVKADAYGHGAVRTAIAAIRAGVSYLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           SV+EG++LR     A I  L      +   I D  L P++     +   ++       + 
Sbjct: 62  SVQEGIELREAGIVAPIISLSLPILEEIDSIIDYKLEPLVIDEEFINELNRAADAQKKTV 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQL 179
              L++DTG +R+G    EA+         K  +L  + +H A AD   +        QL
Sbjct: 122 AVHLKIDTGMSRIGCKPSEAVKLATQIVRAKHLRLQGVATHFAVADSDSESDRAFTKNQL 181

Query: 180 ERFRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSH--PM 232
           ERF   +      GI   L  ++      L P   F + RPG+  YG     N ++   +
Sbjct: 182 ERFTDAVEAIRQTGIHIPLVHAANSGAVQLLPEARFDMVRPGLLAYGYLPIRNAAYTIDV 241

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+    +++LI++  AG  VSYG      +D+ IA   IGYADG    LS        
Sbjct: 242 KPVMELVTQVVLIKQIRAGTCVSYGRNWTAPQDTYIATLPIGYADGLRRALS-------- 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI---KLDDVALA 349
               G K  I     PI+G+I MD  M D+     ++  D + IFGP+        +A  
Sbjct: 294 ---PGLKVRIGSEFFPIVGRICMDQCMIDLGAHPWVQRWDEVCIFGPNPQDNSAQTLADI 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           +GT  Y++   I  R  + +
Sbjct: 351 AGTIPYEITCGIHKRVPRVF 370


>gi|163868814|ref|YP_001610040.1| hypothetical protein Btr_1758 [Bartonella tribocorum CIP 105476]
 gi|161018487|emb|CAK02045.1| Alanine racemase [Bartonella tribocorum CIP 105476]
          Length = 371

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 115/365 (31%), Positives = 176/365 (48%), Gaps = 14/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID++A+  N+ ++         +AVVK NAYGLG  KIAPALY AG + FFV  + E 
Sbjct: 18  ATIDVSAIVANYITLAKRVAPTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIREA 77

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV--ISSVPQLTFYSKLMSCGVSHPYAL 126
           + L+   P   +  L    P   +     + I     S      +           P  +
Sbjct: 78  LHLKSILPSNVMIALLNGLPHLAEEFVAQSGIVPVLNSWNAIENWQKICQKKDKKFPAIV 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E           +   +  I+SHLA  +D +   N  QL  F+T++
Sbjct: 138 QIDTHMNRLGLDQKELQKLIKRPTIFENANIKYILSHLANGEDNTHPSNDAQLTSFKTIL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +      AS A+S GI LG +++F L RPGI+LYG       +  ++ V+  EA+++  R
Sbjct: 198 AQLPPCRASFANSGGIFLGSDFYFDLVRPGIALYGSDPSGKHASLLKPVLRLEAQVLQNR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG     +R S +A  +IGYADG+   LS             G  +  GY 
Sbjct: 258 VVDIGTPVGYGETFITSRPSTLATISIGYADGWLRALSN-----------KGTVYFNGYK 306

Query: 307 VPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +P++G+++MD  + D TD     + GD+I++ GP   L+ VA  + T   ++L  +G+RY
Sbjct: 307 LPMVGRVSMDSIIVDTTDLDQKPQTGDWIELIGPHQTLEKVATDANTLPNEILTSLGSRY 366

Query: 366 AKFYT 370
              YT
Sbjct: 367 RYIYT 371


>gi|154246344|ref|YP_001417302.1| alanine racemase [Xanthobacter autotrophicus Py2]
 gi|154160429|gb|ABS67645.1| alanine racemase [Xanthobacter autotrophicus Py2]
          Length = 357

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 145/361 (40%), Positives = 208/361 (57%), Gaps = 11/361 (3%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL A+ +NW ++ AL+  A  AAVVK NAYGLG +++AP L+ AG ++FFV   +E V L
Sbjct: 2   DLGAIADNWRTIAALAAPAECAAVVKANAYGLGIDRVAPVLWRAGARNFFVAHFKEAVAL 61

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQVDT 130
           R   P+A I+VL G+ P         NL PV+ S P+++ +S      GV  P A+ VDT
Sbjct: 62  RALLPEAIIYVLNGLLPDCAADYAAANLRPVLGSTPEISDWSDYCRDAGVKLPAAIHVDT 121

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
           G +RLGLSL+EA+     +F       SLI+SHLACAD P   + + Q   F  ++  + 
Sbjct: 122 GMHRLGLSLEEAVQL-SGTFRLLGFTPSLIMSHLACADTPGHVLTARQRMVFADVVRRFP 180

Query: 191 GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALA 250
           GI  SLA+S+G LLG ++ F+L RPGI LYGG   IN   P++ VV  E +++ +  A A
Sbjct: 181 GIPGSLANSAGTLLGRDFRFELVRPGIFLYGGI-AINGVPPLRPVVRLEVKVVQVSTAPA 239

Query: 251 GELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL 310
           GE V YG  ++L R S +A  +IGYADG        D+        G +  + G    ++
Sbjct: 240 GETVGYGAAQRLKRPSRLATVSIGYADGLFRAGGSTDA------IKGVEAIVHGQRCHLV 293

Query: 311 GKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           G+++MD+   DITD     ++ GD     G  I +DD+A  SGT  Y++L  +G RYA+ 
Sbjct: 294 GRVSMDLATLDITDLPDGVVQRGDTAVFLGDGISVDDLAARSGTIGYEVLTSLGARYARH 353

Query: 369 Y 369
           Y
Sbjct: 354 Y 354


>gi|229009742|ref|ZP_04166965.1| Alanine racemase [Bacillus mycoides DSM 2048]
 gi|228751537|gb|EEM01340.1| Alanine racemase [Bacillus mycoides DSM 2048]
          Length = 389

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEYIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +               A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLRWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGY DG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTRTEEWIATVAIGYGDGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       K  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------KVLVNGERVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|160915859|ref|ZP_02078067.1| hypothetical protein EUBDOL_01881 [Eubacterium dolichum DSM 3991]
 gi|158432335|gb|EDP10624.1| hypothetical protein EUBDOL_01881 [Eubacterium dolichum DSM 3991]
          Length = 382

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 101/390 (25%), Positives = 160/390 (41%), Gaps = 31/390 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + SN    L+I ++ +++N   +  L     +   +VK NAYG G    A  L   G+  
Sbjct: 2   LTSNTRSWLEIHVSRIEHNVAEIQKLLLGTNKIMGIVKANAYGHGDVVCAKELERIGIDF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V+SV+E + LR     + I +L    P    ++    L   I S+      +      
Sbjct: 62  FGVSSVDEALSLREGGISSPILILGYTPPVHFPLLKKYRLTQTILSLEYAKKLNAYALAH 121

Query: 120 -VSHPYALQVDTGFNRLGLSLQEALDFTHNSF---NKKLGQLSLIISHLACADDPSSH-- 173
                  +++DTG +R+G+  Q               K      I SH   +DD      
Sbjct: 122 DECIDVHVKLDTGMSRIGIVTQSHAYHIEEVKAVYALKGLHACGIFSHFPVSDDLGEDAQ 181

Query: 174 -VNSVQLERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDK-- 225
                Q+E F  +++     GIE     + +S GIL  P+  +   RPG+   G T    
Sbjct: 182 AFTKHQIELFEQVLADLKQAGIEVGLRHIQNSYGILNYPDLDYDYARPGLLWMGITSDDE 241

Query: 226 --INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
             I  +     V+  +A + L++    G  VSYG   K +    IA  ++GYADGYP +L
Sbjct: 242 IAIKTNPDFLPVMEWKANVSLVKTIEKGVTVSYGRHYKASETRRIATLSVGYADGYPRSL 301

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S                 I G    I+G I MD  M D++D   ++ GD   +FG D   
Sbjct: 302 SNTH----------AYVLIHGKRAEIIGNICMDQMMVDVSDIEDVKEGDVATLFGCDGEE 351

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + +D ++  + T N + L RI  R  + Y
Sbjct: 352 CLSIDTLSRNAHTINNETLCRISARVPRIY 381


>gi|166999264|ref|ZP_02265105.1| alanine racemase [Burkholderia mallei PRL-20]
 gi|254179158|ref|ZP_04885810.1| alanine racemase [Burkholderia mallei ATCC 10399]
 gi|160694485|gb|EDP84495.1| alanine racemase [Burkholderia mallei ATCC 10399]
 gi|243064575|gb|EES46761.1| alanine racemase [Burkholderia mallei PRL-20]
          Length = 374

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQFKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+ +  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYEPMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|40063239|gb|AAR38066.1| alanine racemase [uncultured marine bacterium 577]
          Length = 357

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 164/367 (44%), Gaps = 18/367 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   IDL+AL++N   +   S  +R  AV+K +AYG G  + A A  +     F + 
Sbjct: 2   SRPIHALIDLSALEHNLSVVRRHSSRSRVMAVIKADAYGHGLLRAAEAFKS--ADGFAIL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +E  ++LR    +  I ++ G     E  +F+   +  +                    
Sbjct: 60  ELEAAIRLREAGYEHTILLIEGFFSRSELELFERYHLSTVIHNSWQLDMLSAYKQPRGLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERF 182
             L+++TG NRLG + ++ L       +  +     +++H ACAD          QL+ F
Sbjct: 120 VFLKLNTGMNRLGFTPEQFLRALEILKSNPVIGQITLMTHFACADAYKDRSGVIEQLKCF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAE 239
            ++ S       SLA+S+ IL  P  H    RPGI LYG +   + S     ++  +T  
Sbjct: 180 NSITSDL-DFPCSLANSAAILSYPETHADWVRPGIMLYGSSPFSDISASELDLRPAMTLT 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +RII ++    G+ V YG    + R   + + A GYADGYP                G  
Sbjct: 239 SRIIAVQDLHTGDKVGYGQTYCVKRPMRVGIVAGGYADGYPRHA-----------PTGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G+++MDM   D+T+  +  VG  +  +G  + +D+VA ++GT +Y+LL 
Sbjct: 288 ISVDGIRTRIIGRVSMDMLHVDLTNIENGGVGSLVIFWGKGMPVDEVAESAGTISYELLC 347

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 348 SLAQRIK 354


>gi|229015642|ref|ZP_04172632.1| Alanine racemase [Bacillus cereus AH1273]
 gi|229021834|ref|ZP_04178410.1| Alanine racemase [Bacillus cereus AH1272]
 gi|228739474|gb|EEL89894.1| Alanine racemase [Bacillus cereus AH1272]
 gi|228745662|gb|EEL95674.1| Alanine racemase [Bacillus cereus AH1273]
          Length = 389

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVEDAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKESGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTRTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGERVPIVGRVTMDQLMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|256032536|pdb|3E5P|A Chain A, Crystal Structure Of Alanine Racemase From E.Faecalis
 gi|256032537|pdb|3E5P|B Chain B, Crystal Structure Of Alanine Racemase From E.Faecalis
 gi|256032538|pdb|3E5P|C Chain C, Crystal Structure Of Alanine Racemase From E.Faecalis
 gi|256032547|pdb|3E6E|A Chain A, Crystal Structure Of Alanine Racemase From E.Faecalis
           Complex With Cycloserine
 gi|256032548|pdb|3E6E|B Chain B, Crystal Structure Of Alanine Racemase From E.Faecalis
           Complex With Cycloserine
 gi|256032549|pdb|3E6E|C Chain C, Crystal Structure Of Alanine Racemase From E.Faecalis
           Complex With Cycloserine
          Length = 371

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL ID  A+  N       L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
             ++E ++LR    Q  I +L  +      ++   +L   +++   L    + +      
Sbjct: 66  ALLDEAIELREAGVQDPILILSVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNT 125

Query: 121 SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VDTG  R+G  + +E         + K      I +H + AD+  +     Q 
Sbjct: 126 PLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQA 185

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---T 234
            RF+ +++  + +   +   +S+  L  P+    + R G+++YG     NK  P      
Sbjct: 186 GRFKAVLAVLEELPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSGNKLAPSYALKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +I +++  AGE + YG       +  I    IGYADG+   L G         
Sbjct: 246 ALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGFT------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
                  + G    I+G++ MD  M  +  +  + VG  + + G     +  L  VA   
Sbjct: 299 -----VLVNGKRCEIVGRVCMDQCMIRL--AEEVPVGPVVTLVGKDGNEENTLQMVAEKL 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++      R  + Y
Sbjct: 352 ETIHYEVACTFSQRIPREY 370


>gi|86739335|ref|YP_479735.1| alanine racemase [Frankia sp. CcI3]
 gi|123724238|sp|Q2JFD6|ALR_FRASC RecName: Full=Alanine racemase
 gi|86566197|gb|ABD10006.1| alanine racemase [Frankia sp. CcI3]
          Length = 384

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 153/378 (40%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A++ +  ++ A +G+A T AVVK + YG G    A A    G        +EE 
Sbjct: 18  AVIDLDAVRTSVTALVARAGDAATMAVVKADGYGHGMIPCARAALEGGATWLGTAFLEEA 77

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY-ALQ 127
           + LR       +                 ++    S+   L   +             L+
Sbjct: 78  LALRAAGFTVPVLSWLAAPGESFAAAIAADVDLSASAGWALEEAAAAARRTGRTARVHLK 137

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            DTG  R G +  +           +   + ++  + SH A AD P       Q+ RFR 
Sbjct: 138 ADTGLGRAGATEADWPALCDAGAALEAEGVIEVIGVWSHFAFADAPGHPTVQGQIGRFRD 197

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
            I     +        LA+S+  L+ P  HF L RPG+S+YG +         +  ++  
Sbjct: 198 AIDIATKAGLHPSVRHLANSAATLVSPEAHFDLVRPGVSVYGLSPGPEIGPPAAFGLRPA 257

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T      L ++  AG  VSY  +   TR++ +AV  +GYADG P + +           
Sbjct: 258 MTLTTHAALTKRVPAGTGVSYAHRYTTTRETTLAVVPLGYADGIPRSATNT--------- 308

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
              +    G    I G + MD  + D+ D   +  GD + +FGP    +   DD A A G
Sbjct: 309 --AEVLFGGRRRRIAGTVCMDQFVLDVGDD-QVAAGDEVLLFGPGDRGEPTADDWAAALG 365

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+++ R+G R  + Y
Sbjct: 366 TINYEIVSRVGARVPRRY 383


>gi|289423534|ref|ZP_06425335.1| alanine racemase [Peptostreptococcus anaerobius 653-L]
 gi|289156036|gb|EFD04700.1| alanine racemase [Peptostreptococcus anaerobius 653-L]
          Length = 387

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 171/376 (45%), Gaps = 25/376 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++++L  L+ N++ +     + A+   V+K + YG G  ++A    + G   F V+  
Sbjct: 9   AWVEVNLDNLEFNYNELRKRVPDSAKMCMVIKADGYGHGAVELAKFYESIGADFFAVSRA 68

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E  +LR    ++ I  L      + + + + +L   I      +  +++    G     
Sbjct: 69  KEAKELRDAGVKSPILNLGVTLEDEYEYMVERDLSMTIFDYNVASKINEIAKSMGKVARL 128

Query: 125 ALQVDTGFNRLGLSLQEALDF----THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            +++DTG +R+G  ++  LD+           +  +L  + +H A AD+ +    ++QL 
Sbjct: 129 HIKLDTGMSRIGYVVEGRLDYVVGEIKKISQLENIRLEGMFTHFANADEANPEFKNIQLA 188

Query: 181 RFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQT 234
           RF++++         IE    S+S  +L  +  F + RPG+  YG     ++ K+  ++ 
Sbjct: 189 RFKSVVDSLEEEGIKIELIHCSNSAAILNDDDDFNMVRPGVIQYGVYPSDEVEKNVAIKP 248

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++ + R+  I++  +G  V YG     ++   IA   IGYADG+               
Sbjct: 249 VMSFKCRVANIKELGSGVSVGYGRNYFTSKTERIATITIGYADGFLRG------------ 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-KLDDVALASGTT 353
             G   +I G   P+ G I MD TM  + D L +++GD + +FG +   ++DVA    T 
Sbjct: 297 RKGAYVYINGQKCPVTGNICMDQTMVRLPDGLDVKIGDEVLLFGEEYVTVEDVARECSTI 356

Query: 354 NYDLLVRIGTRYAKFY 369
            +++   I  R  + Y
Sbjct: 357 VHEVWCNINRRVDRIY 372


>gi|242238192|ref|YP_002986373.1| alanine racemase [Dickeya dadantii Ech703]
 gi|242130249|gb|ACS84551.1| alanine racemase [Dickeya dadantii Ech703]
          Length = 358

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 97/372 (26%), Positives = 165/372 (44%), Gaps = 22/372 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +       +D +AL++N   +  ++  +R  A+VK NAYG G  + A    +     +
Sbjct: 1   MKT---ATAVVDRSALRHNLQLIRQMAPQSRLIAIVKANAYGHGALEAARVFSD--ADGY 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ + E + LR       I +L G     E  +   + +       +     +  +   
Sbjct: 56  GVSRLSEALALRAGGITKPILLLEGFFCADELPLLAEHQLETAVHCVEQLAALEQATLPH 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                +++DTG +RLG+    A  F    S    + Q   ++SH   AD+P       QL
Sbjct: 116 PLKVWMKLDTGMHRLGVLPAHAEAFYARLSSCANVVQPVNVMSHFCRADEPEFDTTRRQL 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VV 236
           + F        G + S+A+S GILL P  H    RPGI LYG +   +           +
Sbjct: 176 DCFDAFTRGKPGAQ-SIAASGGILLWPEAHRDQIRPGIILYGVSPLGHGDAGQWQLKPAM 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + +I +R+  AGE V YG     TRD+ + V A+GY DGYP                
Sbjct: 235 TLTSHLIAVREHHAGEPVGYGSTWSSTRDTRLGVVAMGYGDGYPRGA-----------RS 283

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   +I G  VP++G+++MDM   D+      +VG+ + ++G  + +++VA  +  + Y+
Sbjct: 284 GTPVWINGREVPLVGRVSMDMLTVDLGPDADDQVGNEVILWGGPLPVENVAAHNDISAYE 343

Query: 357 LLVRIGTRYAKF 368
           L+ R+  R  + 
Sbjct: 344 LITRLTAR-TRV 354


>gi|6708455|gb|AAF25943.1|AF214487_1 alanine racemase [Mycobacterium avium]
          Length = 391

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +  A+  AVVK + YG G  + A A   AG  +  V +V
Sbjct: 16  LAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAALAAGAAELGVATV 75

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +           +      +   +SS  Q     + +   G +   
Sbjct: 76  DEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDELLTAVRDTGRTATV 135

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+   +          +  ++      ++SH+  AD P++ VN VQ +R
Sbjct: 136 TVKVDTGLNRNGVPPAQYPSMLTALRRAVAEQAIVPRGLMSHMVYADQPANPVNDVQAQR 195

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++  +        A L++SS  +  P+  F + RPGI++YG +         +   
Sbjct: 196 FTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLSPVPELGDMGLVPA 255

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L G          
Sbjct: 256 MTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRSLGGRL-------- 307

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 308 ---QVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWADLL 364

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 365 GTIHYEVVTSPRGRITRTY 383


>gi|206900696|ref|YP_002251207.1| alanine racemase [Dictyoglomus thermophilum H-6-12]
 gi|206739799|gb|ACI18857.1| alanine racemase [Dictyoglomus thermophilum H-6-12]
          Length = 378

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 111/375 (29%), Positives = 160/375 (42%), Gaps = 28/375 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVT 63
               +IDL+AL NN   +    G      AVVK +AYG G + ++  L   A V  F V 
Sbjct: 5   LAWREIDLSALLNNIKVIREKIGKKVDIIAVVKADAYGHGAKIVSLFLQKYANVNSFAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            ++EG+ LR      +I VL            +  L PVIS +  L        S G   
Sbjct: 65  HIDEGIFLRKIGITKKILVLSPQLKSSIPYYLEYQLTPVISDIEFLEDLGKFSHSKGKEL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L  DTG  R GL   E     +         L  I SHL+ +++     N  Q + F
Sbjct: 125 KIHLMFDTGMGREGLLPSEVDKVLNVMEKYPGLILEGISSHLSNSENKKDPYNIFQKKLF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             +   +K  E     +++ GI   P +HF   RPGISLYG  DK  K      V+  +A
Sbjct: 185 YEIYDKFKDEELVFHFSNTGGIFNFPEFHFNAVRPGISLYGYGDKALKP-----VMEVKA 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I LI+    G  + YG      +++ IA+  +GYADGY   LS             G+ 
Sbjct: 240 KITLIKDLPEGWGIGYGHTFMTEKNTKIALVPLGYADGYRRDLSN-----------KGRV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            + G    I+G+I+MD    D+TD    + GD + I G +    I   ++A+ S T  Y+
Sbjct: 289 ILNGEYCKIVGRISMDQFTIDVTD-KEAKKGDVVTILGMEKDKIIDAQELAIISNTIPYE 347

Query: 357 LLVRIG--TRYAKFY 369
           +L   G   R    Y
Sbjct: 348 ILTGFGSAKRLKSVY 362


>gi|119503311|ref|ZP_01625395.1| alanine racemase [marine gamma proteobacterium HTCC2080]
 gi|119460957|gb|EAW42048.1| alanine racemase [marine gamma proteobacterium HTCC2080]
          Length = 355

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/365 (27%), Positives = 171/365 (46%), Gaps = 14/365 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L IDL AL NN  +   L GN++  A VK NAYG G  + + AL    V  F V  
Sbjct: 3   RPTSLSIDLNALSNNAATTRRLVGNSKILASVKANAYGHGLTRCSEALNQK-VDGFAVAF 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            EE V LR       + +L G    ++        + ++          +  +C ++ P 
Sbjct: 62  CEEAVLLRQQGITLPLLLLEGPFDREDVDAIKEYDLMMVVHSHHQIELLQKSACPLTSPV 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +++DTG +RLG S  EA        ++     +++++H    ++P+S +   Q   ++T
Sbjct: 122 WIKIDTGMHRLGFSPAEAPSVAQR-LHEMGASSTILMTHYGEGEEPASALTQEQQRAWQT 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
              H      S A+S+ I+     +    RPGI LYG          ++ V++  + ++ 
Sbjct: 181 ST-HSITSATSAANSAAIINTLAPNTDWMRPGIMLYGAAHSDPIGASLEAVMSFRSEVMA 239

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R  LAG+ V YGG+ +  RDS IA   +GY DGYP                G   +++ 
Sbjct: 240 MRHILAGDTVGYGGRWRAQRDSTIATIPVGYGDGYPRGA-----------EDGTPVWLQH 288

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             VP++G+++MDM   D+TD     +G  ++++G  + +++VA  SGT  Y+LL R+  R
Sbjct: 289 QCVPLVGRVSMDMITVDVTDFAGCHIGTSVELWGKHLSVNEVAKHSGTIGYELLTRLTGR 348

Query: 365 YAKFY 369
               Y
Sbjct: 349 VPVNY 353


>gi|189468067|ref|ZP_03016852.1| hypothetical protein BACINT_04461 [Bacteroides intestinalis DSM
           17393]
 gi|189436331|gb|EDV05316.1| hypothetical protein BACINT_04461 [Bacteroides intestinalis DSM
           17393]
          Length = 842

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 152/370 (41%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 484 LEVNLGAMIANLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQEHHVDYLAVAVADE 543

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 544 GSELRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 602

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + ++         ++       + SHL  +D          Q+E F  
Sbjct: 603 IKLDTGMHRLGFAPEDMPRLIERLKSQNAVIARSVFSHLVGSDASQFDAFTRGQIEMFEA 662

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +S+GI   P   F + R GI LYG +   N      +  T +
Sbjct: 663 ASMQLQAAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGISPIDNTIINNVS--TLK 720

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR+    + V Y  +  L RDS IA   IGYADG    L                
Sbjct: 721 TTILQIREVPEEDTVGYSRKGHLKRDSRIAALPIGYADGLNRHLGNGH----------AY 770

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 771 CLVNGQRAPYVGNICMDVCMIDVTDI-ECKEGDIVEIFGDHLPITVLSDVLETIPYEVLT 829

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 830 SVSTRVKRVY 839


>gi|229096607|ref|ZP_04227578.1| Alanine racemase [Bacillus cereus Rock3-29]
 gi|229115582|ref|ZP_04244988.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228667995|gb|EEL23431.1| Alanine racemase [Bacillus cereus Rock1-3]
 gi|228686813|gb|EEL40720.1| Alanine racemase [Bacillus cereus Rock3-29]
          Length = 408

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 161/376 (42%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AGV    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKHVNDENIAMMAAVKANGYGHGAVEVAKAAIEAGVNQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        +     +++  +  +  L   +++           
Sbjct: 88  EAIELREAGITVPILILGYTSVAAAESAIQYDVMMTVYRIEDLQGINEIAQRLQNKARIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++    +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTANELGMQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHATKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T ++ ++VGD +  +G      I +++VA    T 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVTKAMPVQVGDDVVFYGKQGEEEIAVEEVADMLSTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|82919488|gb|ABB95691.1| D-alanine racemase [Bacillus subtilis]
          Length = 370

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 101/374 (27%), Positives = 163/374 (43%), Gaps = 27/374 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +IDL+A+K N  +M    G +    AVVK NAYG G  + A A  +AG     V  ++
Sbjct: 1   WAEIDLSAIKENVSNMKKHIGEHVHLMAVVKANAYGHGDAETAKAALDAGASCLAVAILD 60

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR    +A I VL  + P    I  + ++     SV  L   ++    G S  + L
Sbjct: 61  EAISLRKKGLKAPILVLGAVPPEYVAIAAEYDVTLTGYSVEWLQEAARHTKKG-SLHFHL 119

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VDTG NRLG+  +E +       ++    +   + +H A AD+       +Q ERF+ L
Sbjct: 120 KVDTGMNRLGVKTEEEVQNVMAILDRNPRLKCKGVFTHFATADEKERGYFLMQFERFKEL 179

Query: 186 ISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV----TAE 239
           I+      +    A+S+  L      F   R GI +YG     + S  +   +    T  
Sbjct: 180 IAPLPLKNLMVHCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADMSDEIPFQLRPAFTLH 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    GE VSYG +    +D+ I    +GYADG+   L G D            
Sbjct: 240 STLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLKGTDI----------- 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             +KG  + I G+I MD  M ++        G  + + G      I +D++A    T NY
Sbjct: 289 -LVKGKRLKIAGRICMDQFMVELDQEYP--PGTKVTLIGRQGDEYISMDEIAGRLETINY 345

Query: 356 DLLVRIGTRYAKFY 369
           ++   I +R  + +
Sbjct: 346 EVACTISSRVPRMF 359


>gi|269128462|ref|YP_003301832.1| alanine racemase [Thermomonospora curvata DSM 43183]
 gi|268313420|gb|ACY99794.1| alanine racemase [Thermomonospora curvata DSM 43183]
          Length = 375

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/381 (24%), Positives = 159/381 (41%), Gaps = 26/381 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            E ++ ++DL A++ N   +   +G A T A+VK   YG G  + A A    G     V 
Sbjct: 2   REPVQARVDLDAIRANVALLRERAGGAETMAMVKAEGYGHGLVEAARAALEGGAGWLGVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            V E ++LR       + V+        +      +     S  Q    ++     G   
Sbjct: 62  RVAEALRLRAAGITVPVLVVMATRGEPFEEAVAAGVDLTAGSGWQARRLAEAAERAGRPA 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNSVQL 179
              L+ DTG +R G ++ +       +   +         ++SHLACAD+P     + QL
Sbjct: 122 RVHLKADTGMSRGGATMADWPATVEAALAAQAAGHLRVVGVMSHLACADEPGHPSIARQL 181

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQ 233
             F+  +     +  +     L++S+  L  P   + L RPGI++YG T      +  ++
Sbjct: 182 AVFKEAVEYAEKAGVRPQVRHLSNSAATLTLPEARYDLVRPGIAIYGLTPVPQMGTFGLR 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A +  +++  AG  VSYG      R++ + + A GY DG P   S L    +  
Sbjct: 242 PAMTLVAELAAVKRVPAGSGVSYGHTYVTERETTLGLVAAGYGDGVPRHGSSLLEVLAGG 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                 G            + MD  + D+ D  +   G+ + +FGP    +    + A A
Sbjct: 302 RRRRIAGR-----------VCMDQFVIDLGDD-TASPGEEVLLFGPGDHGEPTAQEWAQA 349

Query: 350 SGTTNYDLLVRIGTRYAKFYT 370
            GT +Y+++ RIGTR  + Y+
Sbjct: 350 LGTISYEIVTRIGTRVPRVYS 370


>gi|240851017|ref|YP_002972417.1| alanine racemase [Bartonella grahamii as4aup]
 gi|240268140|gb|ACS51728.1| alanine racemase [Bartonella grahamii as4aup]
          Length = 371

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 117/365 (32%), Positives = 191/365 (52%), Gaps = 14/365 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             ID++A+  N+ ++       + +AVVK NAYGLG  KIAPALY AG + FFV  + E 
Sbjct: 18  ATIDVSAIVANYITLAKRVAPTQCSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIIEA 77

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           ++L+   P    I VL G+    E+ +  + ++PV++S   +  +           P  +
Sbjct: 78  LQLKSILPSHVTIAVLNGLPHLAEEFVAQSGIVPVLNSWSAIENWQKICQKKDKKFPAIV 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DT  NRLGL  +E      +    +  ++  I+SHL+  +D +   N  QL  F+T++
Sbjct: 138 QIDTHMNRLGLDQKELQKLIKHPTIFEKAEIKYILSHLSNGEDDTHPSNYAQLATFKTVL 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     + S A+S GI LG +++F L RPGI+LYG   +     P++ V+  EA++I  R
Sbjct: 198 AQLPACKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPRGKHPSPLKPVLKLEAQVIQNR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG      R S +A  +IGYADG+   LS             G  +  GY 
Sbjct: 258 VVDIGTPVGYGESFITNRPSTLATISIGYADGWLRALSN-----------KGTVYFNGYK 306

Query: 307 VPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           +P++G+++MD  + D TD     + GD++++ GP   L+ V++ + T   ++L  +G+RY
Sbjct: 307 LPMVGRVSMDSIIVDTTDLDQKPQTGDWVELIGPHQTLERVSIDADTLPNEILTSLGSRY 366

Query: 366 AKFYT 370
              YT
Sbjct: 367 KYIYT 371


>gi|226313784|ref|YP_002773678.1| alanine racemase [Brevibacillus brevis NBRC 100599]
 gi|226096732|dbj|BAH45174.1| alanine racemase [Brevibacillus brevis NBRC 100599]
          Length = 393

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 89/384 (23%), Positives = 151/384 (39%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++++L A+K N  S+        +  AVVK NAYG G   +A      G     V 
Sbjct: 6   RETWIEVNLDAIKKNIQSIRRHIPKQTKIMAVVKANAYGHGSVGVARHALEYGATSLAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC---GV 120
            +EEG+ LR     A I VL      + K     N+         +    K++       
Sbjct: 66  ILEEGIVLRKAGIVAPILVLGFTPLSRVKEAIAWNIELSAFQADWIKKADKIIKSTAFTN 125

Query: 121 SHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + +DTG  RLG+  + A L       +      + I +H + AD+P   +   Q 
Sbjct: 126 RLNIHINIDTGMGRLGVRTKSALLSVVTALTSSSSLAWTGIFTHFSTADEPDHTLTKAQH 185

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSH 230
           E F   + + K          + +++  +  P Y   + R GI +YG             
Sbjct: 186 ELFVQYLRYLKERGFELPTVHMCNTAATIAFPEYSADMIRLGIGMYGLYPSAYIRQLNRV 245

Query: 231 PMQTVVTAEARIILIRKA-LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            +   ++ ++R   ++        +SYG      R  +I    IGYADGY   LS     
Sbjct: 246 KLVPALSLKSRFSYVKTMLTPPFTISYGATYIAKRGEVIGTVPIGYADGYSRALSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  +PI G++TMD  M  + +    + GD + I+G     +I +D+
Sbjct: 303 --------GFVLYQGRRLPIAGRVTMDQMMVSLGEGSG-KQGDEVVIYGKQGNREIPVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY+++  +  R  + +
Sbjct: 354 IAEMLGTINYEVVATLSNRIPRLF 377


>gi|125717409|ref|YP_001034542.1| alanine racemase [Streptococcus sanguinis SK36]
 gi|125497326|gb|ABN43992.1| Alanine racemase, putative [Streptococcus sanguinis SK36]
          Length = 369

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 146/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++    +  V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQKTEKWAVVKANAYGHGAIEVSKH-IDPLVDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   +    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEVDHYKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGTVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSKSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I + DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQAYPL--GTPVVLIGNSGAETITVTDVAEKLGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|310640776|ref|YP_003945534.1| alanine racemase [Paenibacillus polymyxa SC2]
 gi|309245726|gb|ADO55293.1| Alanine racemase [Paenibacillus polymyxa SC2]
          Length = 398

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/390 (24%), Positives = 166/390 (42%), Gaps = 32/390 (8%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSGNARTAAV-VKDNAYGLGCEKIAPALYNAGVQ 58
           M +     R +I+L  L  N+ +   +    +   V VK NAYG G  +I+  +   G  
Sbjct: 1   MQAQYRSTRAEINLDHLGANYEAFRKVLPADKLILVCVKANAYGHGAVEISKEMERLGAD 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
              V  ++E ++LR    +  I VL    P   +  ++ ++   + S   L    +L   
Sbjct: 61  YLSVAFLDEALELRHAGIELPILVLGYTSPEAVQTAWEHDISLTVFSEEVLEGIRRLDRQ 120

Query: 119 G--VSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           G        +++D+G  RLGL   E AL F   +   +   L  + +H A AD+      
Sbjct: 121 GSERKLKVHIKIDSGMGRLGLLPGEAALAFVRQAHELEQVLLEGMYTHFARADEEDKSYT 180

Query: 176 SVQLERFRTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
            +Q +RFR +      +GI   +    +S+  +  P+    + R GIS+YG       + 
Sbjct: 181 LLQYDRFRGVADALREQGITIPIIHTGNSAATIDTPSLSPNMVRIGISIYGLYPSDEVNR 240

Query: 231 PMQ---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            +     V++ +  ++  +    G  VSYG +   + +  I    IGYADGY   LSG  
Sbjct: 241 QVIELLPVLSLKTAVVYTKTLPPGWGVSYGTRYVTSSEERIGTLPIGYADGYSRMLSGKV 300

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGPD--- 340
                      +  I+G  VP+LG I MD  M  +     D+  I+ G+ + + G     
Sbjct: 301 -----------EVLIRGRRVPVLGTICMDQCMVSLQSFAEDAEEIQTGEEVVLIGQQSGE 349

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            I  D++A   GT +Y+++  I  R  + Y
Sbjct: 350 IIAADELASKLGTIHYEVICMIADRVPRVY 379


>gi|262041903|ref|ZP_06015086.1| alanine racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259040709|gb|EEW41797.1| alanine racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 356

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AVVK NAYG G  ++  AL       F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVVKANAYGHGVARVWSALSA--ADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +             +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    GE + YGG  + T++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQNLRPGEAIGYGGLYRTTQEQRIGIVACGYADGYP-----------QVAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|313638720|gb|EFS03820.1| alanine racemase [Listeria seeligeri FSL S4-171]
          Length = 368

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 149/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N       L  N    +VVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRCAIRENIKNEQKKLPKNVAVWSVVKANAYGHGIIEVAKTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       +   +      
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAHNNI---SLTIFREDWLDGVHLETPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++D+G  RLG+   +EA           +  L    +H A AD   +     QL +
Sbjct: 123 KVHLKIDSGMGRLGIRSAEEAEQIEAKIVQTDMFFLEGAYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
           F  ++   K     +   +S+  LL     F   R GIS+YG T  I    N    ++  
Sbjct: 183 FDAILKGLKSRPRFVHAANSAAALLQSQIGFDAVRFGISMYGLTPSIEIKSNLPFKLKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ ++K   G+ VSYG     T    IA   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKKLAPGDSVSYGATYTATEREWIATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  + G   PI+G++ MD T+  +      + G  + I G D    +  DD A    
Sbjct: 294 ---QVLVDGKKAPIIGRVCMDQTIIKLP--YEFQTGTKVTIIGTDHGNSVTADDAAKYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLTERIPRKY 366


>gi|260549412|ref|ZP_05823631.1| alanine racemase 1 [Acinetobacter sp. RUH2624]
 gi|260407521|gb|EEX00995.1| alanine racemase 1 [Acinetobacter sp. RUH2624]
          Length = 356

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 171/363 (47%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKNPEVIEIIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
             + + AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A +I 
Sbjct: 183 ACEPVLASCCNSAAIFKWPEMNFDYVRPGIMLYGASPFADKTVHELDLKPVMTFTAEVIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 243 LNHIQAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ TR
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSTR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|224826682|ref|ZP_03699783.1| alanine racemase [Lutiella nitroferrum 2002]
 gi|224601283|gb|EEG07465.1| alanine racemase [Lutiella nitroferrum 2002]
          Length = 355

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I L   ++N+       G  R  AVVK NAYG G  + A A+ +     + V  
Sbjct: 2   RPLIASIRLEHFRHNYELARRQHGG-RALAVVKANAYGHGAVRCAQAVADI-ADGYAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR       I +L G+    E    + + + ++    Q             +  
Sbjct: 60  LEEALQLREAGLTLPILLLEGVFEAAELREVEQHGLWLVVQSQQQLDMLLASQPAKPYRV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G   Q+                 + ++H A AD+P+    + Q+E F  
Sbjct: 120 WLKMDSGMHRAGFFPQDYAAAYQRLAESGKVDGIVKMTHFARADEPALSATAQQMETFDA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
             +   G E S+A+S+ I++         RPGI LYG T       +   ++ V+   +R
Sbjct: 180 ACAGLPG-EVSVANSAAIMVHERTRRDWGRPGIMLYGATPLPAGYAQDAALKPVMRLTSR 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  +R+  AGE V YG      R + + + A GYADGYP   S            G    
Sbjct: 239 VFGVRELAAGEPVGYGATFVTERPTRVGLIACGYADGYPRLAS-----------TGSPVA 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G  + I+G+++MDM   D+TD  +  +G  ++++G  + +++VA  +GT  Y+LL  +
Sbjct: 288 IDGVRLRIIGRVSMDMITVDLTDLPAAGIGSEVELWGDSVNVNEVAAQAGTIAYELLCNV 347

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 348 -KRAHFVY 354


>gi|239501434|ref|ZP_04660744.1| alanine racemase [Acinetobacter baumannii AB900]
          Length = 356

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  A + N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQAFQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKDPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 183 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 243 LNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|47094893|ref|ZP_00232507.1| alanine racemase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898941|ref|ZP_05258865.1| hypothetical protein LmonJ_03970 [Listeria monocytogenes J0161]
 gi|254911571|ref|ZP_05261583.1| alanine racemase [Listeria monocytogenes J2818]
 gi|254935897|ref|ZP_05267594.1| alanine racemase [Listeria monocytogenes F6900]
 gi|47016775|gb|EAL07694.1| alanine racemase [Listeria monocytogenes str. 1/2a F6854]
 gi|258608485|gb|EEW21093.1| alanine racemase [Listeria monocytogenes F6900]
 gi|293589517|gb|EFF97851.1| alanine racemase [Listeria monocytogenes J2818]
          Length = 368

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 157/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +       +    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGEDNGNVITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|229102703|ref|ZP_04233403.1| Alanine racemase [Bacillus cereus Rock3-28]
 gi|228680711|gb|EEL34888.1| Alanine racemase [Bacillus cereus Rock3-28]
          Length = 408

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 162/376 (43%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++DL A+K+N         +      A VK N YG G  ++A A   AGV    V  V+
Sbjct: 28  VEVDLNAVKHNVKEFKKHVNDENIAMMAAVKANGYGHGAVEVAKAGIEAGVNQLAVAFVD 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E ++LR       I +L        +     +++  +  +  L   +++           
Sbjct: 88  EAIELREAGITVPILILGYTSVAAAESAIQYDVMMTVYRIEDLQGINEIAQRLQNKARIQ 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++DTG +R+GL  +E   F       +  ++  + +H + AD+      ++Q   F   
Sbjct: 148 VKIDTGMSRIGLQEEEVKPFLEELNRMEYVEVVGMFTHYSTADEIDKSYTNMQTSLFEKA 207

Query: 186 ISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVT 237
           ++    +   +      +S+G +   N    + R GI +YG        H    +Q  ++
Sbjct: 208 VNTANELGMQIPYIHSSNSAGSMELSNTFQNMVRVGIGVYGMYPSKEVDHTVVSLQPALS 267

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++++  ++ A     VSYG     T +  IA   IGYADGY   LS             
Sbjct: 268 LKSKVAHVKHATKNRGVSYGNTYVTTGEEWIATVPIGYADGYNRQLSN-----------K 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G  VP++G++ MD  M D+T ++ ++VGD +  +G      I +++VA   GT 
Sbjct: 317 GYALINGVRVPVIGRVCMDQLMLDVTKAMPVQVGDDVVFYGKQGEEEIAVEEVADMLGTI 376

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++   +  R  + Y
Sbjct: 377 NYEVTCMLDRRIPRVY 392


>gi|170733394|ref|YP_001765341.1| alanine racemase [Burkholderia cenocepacia MC0-3]
 gi|169816636|gb|ACA91219.1| alanine racemase [Burkholderia cenocepacia MC0-3]
          Length = 356

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 148/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  +  P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYVPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAESIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      V   ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVSARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAARVP 352


>gi|325696971|gb|EGD38858.1| alanine racemase [Streptococcus sanguinis SK160]
          Length = 369

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 146/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEKDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGTVLKLPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSESQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  S  +  G  + + G      I + DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITVTDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|254442146|ref|ZP_05055622.1| alanine racemase [Verrucomicrobiae bacterium DG1235]
 gi|198256454|gb|EDY80762.1| alanine racemase [Verrucomicrobiae bacterium DG1235]
          Length = 385

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDL AL+ N +++  AL    R  AVVK +AYG G  +    L  AG+  + V 
Sbjct: 9   RRCWAEIDLAALERNLNAIKNALPPRIRYIAVVKADAYGHGMHQTVARLMQAGIDMYGVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VS 121
           +V E   +R         ++ G     + + +F+ +LIP +SSV ++ F   L      +
Sbjct: 69  NVAEAATIREIGGSGWSILILGATLREEAQFLFEYDLIPTLSSVEEVRFLDDLAEKRDAN 128

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++VDTG  RLG+  ++A +        K  +L  I +H + A+         Q  R
Sbjct: 129 LRVHIKVDTGMGRLGIWHEDADELFEAMRTAKRLKLDGIYTHFSHAETDV-EFTERQRRR 187

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGP-NYHFQLTRPGISLYGGTD---KINKSHPM 232
           F T I+    I          +S+G+        +   R G+  +G T     +    P 
Sbjct: 188 FMTAITRVNWINPAELLIHADNSAGLTSFSRESAYNAVRIGLLQFGITPYAQSLFAKVPT 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             + + + RI L+++  AG  VSYG   +L R+S +A+   GY DG P +LS        
Sbjct: 248 NPIFSFKTRISLVKRLPAGTEVSYGRTCRLKRESRVAILCAGYGDGIPRSLSN------- 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIF----GPDIKLDDVA 347
                G   I+G   P LG++TMD T+ D+TD   S + GD   +     G +IK++  A
Sbjct: 301 ----KGFALIQGKRCPYLGRVTMDQTIIDVTDLEVSPQAGDEACLIGFQDGGEIKVEQFA 356

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             +GT ++++L  I  R  + Y
Sbjct: 357 RWAGTISWEILCSITKRVPRIY 378


>gi|261363843|ref|ZP_05976726.1| alanine racemase [Neisseria mucosa ATCC 25996]
 gi|288568436|gb|EFC89996.1| alanine racemase [Neisseria mucosa ATCC 25996]
          Length = 352

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 156/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L++N+ ++  + G  +  AV+K +AYG G  + A AL       F V +
Sbjct: 2   RPLNARIRLDNLRHNYQTLKQIHGG-KMLAVIKADAYGHGAVRCAHALSEI-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+E V+LR       I +L G+    E    D   +                        
Sbjct: 60  VDEAVELRESGITNPIVLLEGVFEAAEYATVDKYNLWPGVGSQWQLEALIAHHWQNPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                K     +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYTSAYTALKQCKHVDSIVKFSHFACADEPDNGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       V YG     ++ + + + A GYADGYP   S                 ++G
Sbjct: 239 ERVLQPHSPVGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAVEG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++ D+    +G  ++++G  + +++VA A+G   Y++L  +  R
Sbjct: 288 KRSRIIGRVSMDMITVEL-DASQEGLGAEVELWGDVVNINEVAEAAGMIPYEILCNV-KR 345

Query: 365 YAKFYT 370
               Y+
Sbjct: 346 AKFTYS 351


>gi|34499248|ref|NP_903463.1| alanine racemase [Chromobacterium violaceum ATCC 12472]
 gi|34105099|gb|AAQ61455.1| alanine racemase [Chromobacterium violaceum ATCC 12472]
          Length = 357

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 165/367 (44%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +RL+I L A+++N+      S      AV+K NAYG G    A AL +     F + +
Sbjct: 3   RPIRLEISLPAIRHNFLFTRQHSQARSLFAVIKANAYGHGLLDTAKALADQ-ADGFALLN 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +E+ V+LR       I +L G     E        +       Q   +    S       
Sbjct: 62  IEDAVRLREAGFDHPISLLEGPFDAAEAAAMADYRLGGAVHSQQQMDWLAKGSADRPIDV 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   QEA             +L+ +++H A AD+      + Q  RF  
Sbjct: 122 WLKINSGMNRLGFRPQEAAAAQARLQALPGARLTAVMTHFATADEDYG--VAEQWARFEP 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
            ++   G++   A+S+ +L  P+ H  + RPGI LYG +   N++     +   +T  A 
Sbjct: 180 -VAVASGLKVCAANSAALLRHPHTHGDIGRPGIVLYGASPFENETGAGLGLMPAMTLSAD 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +++   G+ V YG +    R   I V A GYADGYP   +            G    
Sbjct: 239 IIAVQQLQPGDAVGYGRRFIADRAMRIGVVACGYADGYPRVAAN-----------GAPAA 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    + G+++MDM   DI+      VG  ++++GP+  ++ VA A+GT +Y+L+  +
Sbjct: 288 VDGQPCRLAGRVSMDMLTVDISHLPQAGVGSRVELWGPNAPIEKVAAAAGTISYELMSAV 347

Query: 362 GTRYAKF 368
             R  + 
Sbjct: 348 MPRVPRV 354


>gi|150017611|ref|YP_001309865.1| alanine racemase [Clostridium beijerinckii NCIMB 8052]
 gi|149904076|gb|ABR34909.1| alanine racemase [Clostridium beijerinckii NCIMB 8052]
          Length = 376

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 161/376 (42%), Gaps = 27/376 (7%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            KIDL A+ +N +        N +  A++K + YG G  ++   L +  V  + V ++EE
Sbjct: 9   AKIDLEAILHNINEAKKRIERNVKIMAIIKADGYGHGAAELGDFLKSE-VDYYGVATLEE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
            ++LR    +  I +L    P Q  +++ +     V ++            C       +
Sbjct: 68  ALELRKSGIELPILILGYTSPSQYIEVVKNNITQTVYNTEMAKEMSKAGAICKKEAKVHI 127

Query: 127 QVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG  R+G    E  +             +  + +H A AD+     + +Q+ ++   
Sbjct: 128 ALDTGMTRIGFDANEDGIAEVQEILTFSNLVVEGLFTHFATADEADKSYSKLQISKYDKF 187

Query: 186 IS----HYKGIEA-SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVT 237
           ++        I    + +S+GI+   ++ F + R GI  YG       +         + 
Sbjct: 188 VALLEERDINIPIKHMCNSAGIMEFDHHRFDMVRCGIITYGLYPSEEVNKNAITLKPALQ 247

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +  +I +    AG  VSYG       ++ IA  ++GYADGYP  LS             
Sbjct: 248 WKTHVINVNIVDAGHGVSYGKTYITKNETKIATLSVGYADGYPRALS-----------SK 296

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G+  I G   PI+G+I MD  M D+T   ++++ D + + G D    I ++++A  +G+ 
Sbjct: 297 GRVLIHGKYAPIIGRICMDQMMVDVTHIDNVKIEDEVTLVGKDGENIIYVEELANMAGSF 356

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+ +  IG R  + Y
Sbjct: 357 NYEFVCGIGKRVQRLY 372


>gi|119945753|ref|YP_943433.1| alanine racemase [Psychromonas ingrahamii 37]
 gi|119864357|gb|ABM03834.1| alanine racemase [Psychromonas ingrahamii 37]
          Length = 375

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 90/380 (23%), Positives = 149/380 (39%), Gaps = 24/380 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +    R  I L  L +N   +   +G       +K NAYG   E IA  L + G     
Sbjct: 4   KNTHLTRAIIHLDHLTHNMKVLQKKAGKRPLFPAIKANAYGHDAEIIAKHLISLGYTTLC 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-V 120
              + E  +L      A   +L          + D +  P++SS  QL   ++       
Sbjct: 64  TAHLSEAAELVEKGVNATFIILSPTLAENSDYLLDYDFQPIVSSQVQLQALAQAARRRDK 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                ++VDTG  R+G+   + L F      +    +  + SH   AD+ +   +  Q+ 
Sbjct: 124 QITIHVKVDTGMGRMGVRPDQLLMFLDECKAQPEIIIGGVCSHFPRADENNLSFSKTQIN 183

Query: 181 RF---RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----Q 233
            F   +     Y      +A+S+ +      H    RPGIS+YG    ++   P     +
Sbjct: 184 TFTALKKETKAYNIPLYHIANSAALFALEEAHLDAIRPGISIYGLKPSVSMVVPELNDLK 243

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            +++  +RI L+++ +    +SYG      + SLIA   IGY DG   +LS         
Sbjct: 244 PIMSLVSRITLLKEVVQDTGISYGHLHYTDKPSLIATIPIGYGDGLSRSLSNRI------ 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDDVAL 348
                +  I       +G I MD  M D+T     + +GD + I G      I  DD+A 
Sbjct: 298 -----EVLIGNERCRQIGNICMDQCMIDVTQLRGKVSIGDEVVIIGTQGSETITADDLAK 352

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
              T NY+++  I +R  + 
Sbjct: 353 KQHTVNYEIVTAISSRVPRI 372


>gi|229131246|ref|ZP_04260152.1| Alanine racemase [Bacillus cereus BDRD-ST196]
 gi|228652237|gb|EEL08168.1| Alanine racemase [Bacillus cereus BDRD-ST196]
          Length = 389

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 87/387 (22%), Positives = 152/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEYIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDVNVAAENDVALTVFQKEWVEEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSIMKFHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +               A+S+  L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLRWLKEFGVNPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGY DG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTRTEEWIATVAIGYGDGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGERVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|254501958|ref|ZP_05114109.1| alanine racemase [Labrenzia alexandrii DFL-11]
 gi|222438029|gb|EEE44708.1| alanine racemase [Labrenzia alexandrii DFL-11]
          Length = 380

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 135/366 (36%), Positives = 196/366 (53%), Gaps = 10/366 (2%)

Query: 8   RLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           RL +DL A+  NW  +   L+  +  AA +K NAYG G  + A  L+  G + FFV    
Sbjct: 17  RLTVDLDAIAANWSLLRSRLAPGSECAATIKANAYGTGQAETAKRLFEEGCRTFFVAVPT 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR   P A I+ L G+ P    ++   ++ PV+ S+ +   + +   +   S P A
Sbjct: 77  EAMALRQTLPSATIYALDGLFPDTADLLLQHDVRPVLGSLDELKEWAALCRTARKSFPAA 136

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + VDTG +RLGLS  E      +       + SL +SHLAC  DP   +N  QL RF  L
Sbjct: 137 VHVDTGIHRLGLSGDEFGTALADLELMGPFKPSLFMSHLACGSDPDHPMNQEQLARFTEL 196

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            S +KG+  SLA+S+G+L+GP+YHF L RPGISLYGG    +  +PMQ V   EARI+++
Sbjct: 197 TSPFKGVPRSLANSAGVLMGPDYHFDLVRPGISLYGGRAFDHGDNPMQPVAKVEARIMIV 256

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G+ + YG  +   R    AV A GYADG     S  D         GG G I G+
Sbjct: 257 RNVPKGDAIGYGATQTAKRALRNAVVAAGYADGLLRRASSSDDR------PGGFGMIGGH 310

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
              ILG+I+MDM   D+TD     ++ G  +++ GP++   D+A  + T +Y+ L  +G 
Sbjct: 311 KASILGRISMDMITLDVTDIPEHLVQRGGLVEMLGPNVAAADMAAYAETIDYEYLTSLGR 370

Query: 364 RYAKFY 369
           R+ + Y
Sbjct: 371 RFERIY 376


>gi|167764920|ref|ZP_02437041.1| hypothetical protein BACSTE_03312 [Bacteroides stercoris ATCC
           43183]
 gi|167697589|gb|EDS14168.1| hypothetical protein BACSTE_03312 [Bacteroides stercoris ATCC
           43183]
          Length = 843

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 485 LEVNLGAMIANLNHYRGKLKPETKMVCMVKASAYGAGSYEIARTLQEHHVDYLAVAVADE 544

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 545 GSDLRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 603

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + ++          +       + SH   +D          Q+E F  
Sbjct: 604 VKLDTGMHRLGFAPEDMPRLIERLKGQNAVIPRSVFSHFVGSDAQQFDAFTRKQIETFEK 663

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +S+GI   P   F + R GI LYG +   N    M  V T +
Sbjct: 664 ASMLLQEAFPYKILRHICNSAGIERFPGAQFDMVRLGIGLYGISPIDN--SIMHNVSTLK 721

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  LTR S IA   IGYADG    L                
Sbjct: 722 TTILQIRDVPEEDTVGYSRKGHLTRPSRIAAIPIGYADGLNRHLGNGH----------AY 771

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++   GT  Y++L 
Sbjct: 772 CLVNGQRAPYVGNICMDVCMIDVTDI-DCKEGDSVEIFGDHLPITVLSDVLGTIPYEVLT 830

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 831 NVSTRVKRVY 840


>gi|302536293|ref|ZP_07288635.1| alanine racemase [Streptomyces sp. C]
 gi|302445188|gb|EFL17004.1| alanine racemase [Streptomyces sp. C]
          Length = 378

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 161/378 (42%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL A+++N  ++ A +  A   A+VK NAYG G  + A A   AG       + EE 
Sbjct: 10  AEIDLDAVRDNVRALRARAPRAELMAIVKSNAYGHGAVQCARAAQEAGAGWLGTATPEEA 69

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           + LR    + RI        G  +   + +L   +S +       +   + G      L+
Sbjct: 70  LALRDAGIRGRIMCWLWTPGGPWREAVEADLDVSVSGMWALDEVRAAARAAGRPARIQLK 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRT 184
            DTG  R G    +  +    +   +         + SH ACAD+P      +QL+ FR 
Sbjct: 130 ADTGLGRNGCQPADWAELVGAAVAAQAEGTVRVTGVWSHFACADEPGHPSIRLQLDAFRD 189

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ----TV 235
           +++             +A+S   L  P  HF L R GI++YG +       P Q      
Sbjct: 190 MLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGIAVYGVSPSPELGTPAQLGLRPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +A + L++   AG  VSYG       ++ +A+   GYADG P   SG          
Sbjct: 250 MTLKASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGR--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             G   + G +    G+I MD  + D+ + L  E GD   IFG     +   +D A A+G
Sbjct: 301 --GPVLVAGKVRRAAGRIAMDQFVVDLGEDL-AEAGDEAVIFGDAERGEPTAEDWAQAAG 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 358 TIAYEIVTRIGGRVPRVY 375


>gi|224499424|ref|ZP_03667773.1| hypothetical protein LmonF1_06877 [Listeria monocytogenes Finland
           1988]
          Length = 368

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +       +    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELTPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|325981463|ref|YP_004293865.1| alanine racemase [Nitrosomonas sp. AL212]
 gi|325530982|gb|ADZ25703.1| alanine racemase [Nitrosomonas sp. AL212]
          Length = 360

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 21/371 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  ++  ID +AL +N   +   + +AR  AV+K NAYG G    A AL N  V  F + 
Sbjct: 2   SRPIQAIIDHSALTHNLTIVRQYAPSARILAVLKANAYGHGLLHTANALKN--VDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + LR    +  I +L G     +  +I    L  VI    Q++  S         
Sbjct: 60  ELDAAITLRTAGYKQPILLLEGFFSTKEIALIEQYQLSAVIHHTEQVSMLSDFK--NHKM 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN-SVQLER 181
              ++V+TG NRLGLS ++         N +  +   +++H A ADDPS   +   QL+ 
Sbjct: 118 DIFIKVNTGMNRLGLSPKQLPQVIKELTNDQHVKNITLMTHFASADDPSEKASVLRQLQC 177

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTA 238
           F T I+       SLA+S+ I+  P  H    RPGI LYG +   +K      +  V+T 
Sbjct: 178 FET-ITETYNYPCSLANSAAIVNYPETHSDWVRPGIMLYGASPFPDKTAADLNLLPVMTL 236

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            ++II +     G+ V Y G         I + A GYADGYP                G 
Sbjct: 237 SSKIIAMHDLEPGDKVGYHGLFTADDRIRIGIVACGYADGYPRHA-----------PTGT 285

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              I      +LG+I+MDM   D+T+  + ++GD + ++G  + ++++A  +GT++Y LL
Sbjct: 286 PILINNQRSRLLGRISMDMLAIDLTEVENTKLGDPVVLWGKGMPVEEIAGYAGTSSYQLL 345

Query: 359 VRIGTRYAKFY 369
             +  R  + +
Sbjct: 346 CGLSARVDRKF 356


>gi|237746074|ref|ZP_04576554.1| alanine racemase [Oxalobacter formigenes HOxBLS]
 gi|229377425|gb|EEO27516.1| alanine racemase [Oxalobacter formigenes HOxBLS]
          Length = 359

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 21/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   ID+ A+++N   + +    A+  AVVK NAYG G E+   A  +     F +  
Sbjct: 3   RPLVASIDIAAMQHNLSLVRSTVPRAKIWAVVKANAYGHGLERSVRAFSD--ADGFALIE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +E  + LR    +  I +L G   P +   +   N+   +    Q+    K     +   
Sbjct: 61  IEAAIHLREIGWKKPILLLEGFFYPHELPTLARYNIAFAVHCDEQIDMLEKSR-LDMPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--VNSVQLER 181
             L+++TG NRLG    E              +    ++H A ++           QL R
Sbjct: 120 VHLKMNTGMNRLGFLPSEYGKALERLKKIPNVRDISYMTHFANSEAKKHPLLSVKEQLRR 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAE 239
           F +     KG + +L++S  ILL P       RPGI LYGGT   K    + ++  +T  
Sbjct: 180 FDSATQGLKG-DRNLSNSGAILLHPEIRTDWVRPGIMLYGGTPGGKTAAEYGLEPAMTLS 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+    G+ + YG            V A GYADGYP                G  
Sbjct: 239 SEIIQIQHIREGDSIGYGSIFTAKGPMKTGVVACGYADGYPRMA-----------PEGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+T      VG  + ++G ++ +D+VA A+GT  Y+L+ 
Sbjct: 288 IMVDGVKTRLVGRVSMDMITVDLTPVPDAHVGSKVTLWGKELPIDEVAEAAGTVGYELMC 347

Query: 360 RIGTRYAKF 368
            +  R  + 
Sbjct: 348 ALSLR-PRI 355


>gi|148261853|ref|YP_001235980.1| alanine racemase [Acidiphilium cryptum JF-5]
 gi|226711024|sp|A5G2H9|ALR_ACICJ RecName: Full=Alanine racemase
 gi|146403534|gb|ABQ32061.1| alanine racemase [Acidiphilium cryptum JF-5]
          Length = 357

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 189/364 (51%), Gaps = 12/364 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L ID  A+  NW ++ A       A VVK +AYGLG   IAPAL  AG + FFV +
Sbjct: 2   NHPTLTIDPGAVAANWQALAARHTG-EVAGVVKADAYGLGAALIAPALAAAGCRSFFVAT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR   P ARI VL G  PG+E  +    L PV+ S+     +        + P 
Sbjct: 61  LDEALSLRALLPAARIGVLNGCPPGEEGTMRARELRPVLGSLAACARWRGAAGDDKAPPS 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DTG NRLGL   EA     +        L+ +++HL  A++P +  N+ Q ERF  
Sbjct: 121 FLHLDTGMNRLGLDRDEAAHLIAHPTLLDGLGLTHVMTHLVAAEEPDASANAAQRERFAA 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             + +  +  SLA+SSG+ LGP +   L RPG +LYGG      ++PM+  +   A I+ 
Sbjct: 181 FAARFPWLRTSLANSSGLFLGPGFGSDLARPGYALYGGNPTPTAANPMRPAIALAAPILQ 240

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           IR   +GE V Y G  +  R S IA   +GYADG P +LS   +              +G
Sbjct: 241 IRAIASGETVGYNGTWRAARPSRIATIGVGYADGLPRSLSNRLTARW-----------QG 289

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            ++P+ G+++MD+T FD+TD   I  GD I++ GP   +D  A  +GT  Y++L  +G R
Sbjct: 290 KIIPVAGRLSMDLTTFDVTDHPDIAPGDVIELIGPGHDIDAFAAEAGTIGYEILTSLGPR 349

Query: 365 YAKF 368
           Y + 
Sbjct: 350 YRRV 353


>gi|329962467|ref|ZP_08300467.1| alanine racemase [Bacteroides fluxus YIT 12057]
 gi|328530023|gb|EGF56911.1| alanine racemase [Bacteroides fluxus YIT 12057]
          Length = 834

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 149/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +S    L   A+T  +VK +AYG G  +IA  L    V    V   +E
Sbjct: 476 LEVNLGAMIANLNSYRSRLKPEAKTVCMVKASAYGAGSYEIAKTLQEHHVDYLAVAVADE 535

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 536 GSELRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLEALIKEAEKEGITNFPIH 594

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           ++VDTG +RLG + ++          +       + SH   +D          Q+  F  
Sbjct: 595 VKVDTGMHRLGFAPEDMPRLIERLKGQNAVIPRSVFSHFVGSDAPQFDAFTRQQIVNFEK 654

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P   F + R GI LYG     N    M  V T  
Sbjct: 655 ASMELQNAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGVNPVDN--SIMNNVSTLR 712

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L+R S IA   IGYADG    L                
Sbjct: 713 TTILQIRDVPGEDTVGYSRKGHLSRPSRIAAIPIGYADGLNRHLGNGH----------AY 762

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 763 CLVNGQKAPYVGNICMDVCMIDVTDI-DCKEGDMVEIFGDHLPITVLSDILETIPYEILT 821

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 822 SVSTRVKRVY 831


>gi|126651486|ref|ZP_01723690.1| D-alanine racemase [Bacillus sp. B14905]
 gi|126591739|gb|EAZ85835.1| D-alanine racemase [Bacillus sp. B14905]
          Length = 389

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/387 (22%), Positives = 157/387 (40%), Gaps = 33/387 (8%)

Query: 1   MHSN---EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +       +  I+L A++ N  ++   +  N +  AVVK NAYG G   +A A   AG
Sbjct: 17  MKTQQYFRPTKAMINLQAIQQNVKNLKKFIRPNVQIIAVVKANAYGHGDVAVAQAALEAG 76

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V + +E + +R    +    ++ G  P           I +     +    +  +
Sbjct: 77  ATILAVATPDEALHIR-AHFEDPDILILGASPVSFAPFAAQQRIMLTVYGSEWVQQAAPL 135

Query: 117 SCGVSHP--YALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               + P    ++VD+G  R+G+   Q+ L       +    +L+ I +H A AD+  + 
Sbjct: 136 IANEALPLLLHMKVDSGMGRIGIRSEQDLLALYQTIESTDNVELNGIFTHFATADEKDTT 195

Query: 174 VNSVQLERFRTLISHYKGIEASLASS---SGILLGPNYHFQLTRPGISLYGGTD----KI 226
               Q++ F + ++        + +S   + ++   N  +   R GIS+YG +     + 
Sbjct: 196 YFDQQVQFFESCLAVLPIKPPLVHASNTAASLVKDSNLQYDAVRYGISMYGLSPSSYVES 255

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                +Q   + E+ ++ +++   GE V YG       D  I    IGYADG    L G 
Sbjct: 256 ILPFALQPAFSLESELVHVKEIKKGESVGYGATYVAPTDMWIGTLPIGYADGVIRKLGGQ 315

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  +PI+G+I MD  M  +  +    +G+ + + G      I 
Sbjct: 316 ------------EVLIDGQRMPIVGRICMDQCMVALPKAY--AIGEKVTLIGQQGQNRIS 361

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           +D+ A    T NY++   I  R  + Y
Sbjct: 362 IDEWATKLETINYEIPCMITARVPRIY 388


>gi|270290192|ref|ZP_06196418.1| alanine racemase [Pediococcus acidilactici 7_4]
 gi|270281729|gb|EFA27561.1| alanine racemase [Pediococcus acidilactici 7_4]
          Length = 375

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 148/377 (39%), Gaps = 25/377 (6%)

Query: 4   NEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL +D  A++ N    +  L   +   AV+K +AYG G   +A     AG   F V
Sbjct: 6   HRASRLVVDAAAIRQNVKKEIERLDPQSELFAVIKADAYGHGLIPVARYTEQAGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR       I VL   +     +  + N+   +  V  LT  +  ++     
Sbjct: 66  AILDEALTLREAGFAEPILVLGITNVKWAALAAEKNVSLTVGDVEWLTKAAPQLTAEHPL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ-LSLIISHLACADDPSSHVNSVQLER 181
              L +DTG  R+G    + L+       K        + +H A AD+      ++Q++R
Sbjct: 126 KVHLALDTGMGRIGFQESDGLNQAAELLIKDPRFVFEGVFTHFATADEKDPTYFNLQVDR 185

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F  L+         +   +++  L     +  L R G+ +YG       +   + +Q  +
Sbjct: 186 FHKLVDTLPEKPRYVHVSNTATSLWHAACNGNLIRFGVGIYGMNPSGTVLEPPYDLQPAM 245

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+R+   +    G  VSYG      +D  I    IGYADGYP  L G           
Sbjct: 246 TLESRLSFSKLLKKGRSVSYGATYTAEQDEWIGTIPIGYADGYPRCLQGF---------- 295

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
                + G+   I+G++ MD  M  +        G  + +     G  I + D+A   GT
Sbjct: 296 --HVLVDGHFCEIVGRVCMDQLMIRLPHEYPA--GTPVILAGQSQGKSISMTDIADYVGT 351

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++      R  + Y
Sbjct: 352 INYEITCGFTERLPRVY 368


>gi|262279566|ref|ZP_06057351.1| alanine racemase [Acinetobacter calcoaceticus RUH2202]
 gi|262259917|gb|EEY78650.1| alanine racemase [Acinetobacter calcoaceticus RUH2202]
          Length = 356

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRHALQYNLNRVKQLAANSKIVSMVKANAYGHGIKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQ 127
           +R    Q  + ++ G     E  I  +     VI    Q  +  K             ++
Sbjct: 66  IRELGFQQPVTLIEGAFYEDEMPIAIEQKFECVIHHQQQFEWLIKHKQEYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKVPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               + AS  +S+ I   P  HF   RPGI LYG +   +K      ++ V++  A +I 
Sbjct: 183 ACDPVLASCCNSAAIYKWPELHFDYVRPGIMLYGASPFADKTVHDLDLKPVMSFTAEVIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 243 LNHIQAGEHVGYGSTFCAQQKMDIAIVSIGYGDGYPRAY-----------IKQNYVAIDG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T    +++G  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLCPVVGRVSMDMLAIDVTAI-QVKLGSQVELWGTHRLVDDVADANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PIR 353


>gi|171319307|ref|ZP_02908420.1| alanine racemase [Burkholderia ambifaria MEX-5]
 gi|171095489|gb|EDT40456.1| alanine racemase [Burkholderia ambifaria MEX-5]
          Length = 356

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++   VVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRFAGPSKVWTVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQVRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
              +  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAENIAGAR-SLANSAAVLWHPDTHFDWVRPGIMLYGASPSGLSADIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIAKGQAIGYGSTFSAPAQMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 IVDGIRTHIVGRVSMDMITVDLTPCPQAGVGARVELWGNALPIDDVARHCGTIGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAGRVP 352


>gi|298369328|ref|ZP_06980646.1| alanine racemase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283331|gb|EFI24818.1| alanine racemase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 352

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 157/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L++N+ ++  + G  +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNARIRLDNLRHNYQTLKQIHGG-KMLAVIKADAYGHGAVRCAHALSDL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+E V+LR       I +L G+    E    D   +                +       
Sbjct: 60  VDEAVELRESGITNPIVLLEGVFEASEYATVDKYNLWPGVGSQWQLEALIAHNWQTPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                K     +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYTSAYTALKQCKHVDGIVKFSHFACADEPDNGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       V YG     ++ + + + A GYADGYP   S                 ++G
Sbjct: 239 ERVLQPHSPVGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAVEG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++ D+    +G  ++++G  + +++VA A+G   Y++   +  R
Sbjct: 288 KRSRIIGRVSMDMITVEL-DASQEGLGAEVELWGDVVNINEVAEAAGMIPYEIFCNV-KR 345

Query: 365 YAKFYT 370
               Y+
Sbjct: 346 AKFTYS 351


>gi|326790617|ref|YP_004308438.1| alanine racemase [Clostridium lentocellum DSM 5427]
 gi|326541381|gb|ADZ83240.1| alanine racemase [Clostridium lentocellum DSM 5427]
          Length = 379

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 111/384 (28%), Positives = 181/384 (47%), Gaps = 33/384 (8%)

Query: 5   EFLRL--KIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           E LR   +I+L+ L++N   +   L    +  AVVK +AYG G  +++  L   G++ F 
Sbjct: 9   ELLRAYSEINLSNLEHNLGQLQEQLPAMCKVIAVVKADAYGHGAVQVSRHLQRLGIEHFA 68

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V S++E ++LR+   +  I VL     G+ + +   ++   +         SK       
Sbjct: 69  VASIDEAIELRINQIEGEILVLGYTPIGRREDLIYYHITQALIDESYAEKISKGKG---R 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQ 178
               +++DTG NRLGL              + L +++   SHL+ AD   D        Q
Sbjct: 126 LRVHIKLDTGMNRLGLRATNLDALMAIYRKENL-EITGTFSHLSRADSLCDEDKSFTEYQ 184

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---- 229
           ++ F  +I     +H +  +  L SS GI+  P     L RPGI LYG +    ++    
Sbjct: 185 IKTFYEIIGSLKKNHIEVGKTHLQSSYGIINYPQIKCDLARPGILLYGVSSNPEENIAER 244

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V++  A++  I+    GE V YG   K+ ++S+IA+  IGYADGYP  LS     
Sbjct: 245 LDVRPVLSLRAKVGSIKHVDKGETVGYGNHFKVEKESVIAIVTIGYADGYPRYLSKR--- 301

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                  G K  I+G  VPI+G + MD  + D+T    I+VG  + + G D    + ++ 
Sbjct: 302 -------GCKVLIRGREVPIIGNVCMDQMIVDVTSLNDIKVGSQVTLIGKDEEAYLSVNQ 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           ++L + T N + L  IG R  K Y
Sbjct: 355 ISLLTNTINNETLTGIGQRVKKVY 378


>gi|322392695|ref|ZP_08066155.1| alanine racemase [Streptococcus peroris ATCC 700780]
 gi|321144687|gb|EFX40088.1| alanine racemase [Streptococcus peroris ATCC 700780]
          Length = 367

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 153/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  IDL A++ N   M A         AVVK NAYG G   +A       V
Sbjct: 1   MKTSPHRPTKAFIDLGAIRYNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVA-TAIQNDV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR      RI +L         +    N+   ++ +  +        
Sbjct: 60  DGFCVSNIDEALELRQAGIDQRILILGVTEVASIDLAKKYNITLAVAGLEWIQQLLAEEP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L++D+G  R+G       +       +    +  I +H A AD+ S      
Sbjct: 120 DLSGLNVHLKIDSGMGRIGFRESRDAEQAQALLKEHGASVEGIFTHFATADEESDIYFYK 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL RF+ ++S  K        ++S+  L   +  F   R G ++YG       +   + +
Sbjct: 180 QLNRFKEILSELKDRPDLVHASNSATTLWHTDTIFNAVRMGDAMYGLNPSGQVLTLPYEL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ ++K   G  + YG   +   + +IA   IGYADG+   +         
Sbjct: 240 KPALSLESALVHVKKVPTGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G   PI+G+++MD     +       +G  + + G     +I   DVA+
Sbjct: 295 -------VLVDGQACPIVGRVSMDQITIRLPKVYP--IGTKVTLIGSNGDQEITATDVAV 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  +  R  + Y
Sbjct: 346 YRGTINYEVVCLLSDRIPREY 366


>gi|229171087|ref|ZP_04298685.1| Alanine racemase [Bacillus cereus MM3]
 gi|228612417|gb|EEK69641.1| Alanine racemase [Bacillus cereus MM3]
          Length = 389

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNITHIKDFIPSDVEIFAVVKANAYGHDYVPVAKTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR       I VL         +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITVPILVLGPSPARDVNVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKAFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLQQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLINGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGKQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIIATISFRVPRIF 373


>gi|240126095|ref|ZP_04738981.1| Alr [Neisseria gonorrhoeae SK-92-679]
 gi|268684684|ref|ZP_06151546.1| alanine racemase [Neisseria gonorrhoeae SK-92-679]
 gi|268624968|gb|EEZ57368.1| alanine racemase [Neisseria gonorrhoeae SK-92-679]
          Length = 352

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESSMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +   +    ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGDSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|149278412|ref|ZP_01884549.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Pedobacter sp. BAL39]
 gi|149230782|gb|EDM36164.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Pedobacter sp. BAL39]
          Length = 824

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 100/368 (27%), Positives = 151/368 (41%), Gaps = 18/368 (4%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL AL  N       L    +  A+VK  +YG G  +IA  L    V    V   +E
Sbjct: 465 LEIDLNALSGNLQFYRSKLKPGVKIMAMVKAFSYGSGSFEIANVLQYHKVDYLAVAFTDE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV LR       I V+       E I+       + ++     F + L      +P  ++
Sbjct: 525 GVALRKGGITMPIMVMSPEPSAFEAIVRYKLEPEIYNTDILNKFLNFLSDTEQQYPVHIK 584

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRTLI 186
           +DTG +RLG    +  D      + +  ++    SHL  ++D         QL RF  + 
Sbjct: 585 IDTGMHRLGFEEIDIPDLLMALNSNQKIRVQSSFSHLVGSEDIMHDEFTRHQLSRFTAMA 644

Query: 187 SHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                         ++++SGI   P+    + R GI +YG    I +S  +Q V   +  
Sbjct: 645 DTIREGLGYDFIRHISNTSGISRHPDAQLDMVRIGIGMYGYDGGIAQSKGLQPVAILKTT 704

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  I+     E + YG +  L      A   IGYADGY                  GK  
Sbjct: 705 ITQIKHIKPNETIGYGRKGILPEGGTTATVKIGYADGYDRRFG----------HGVGKML 754

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           IKG +VP +G I MDM M D+T    ++ GD + +F   + + D+A   GT  Y++L  I
Sbjct: 755 IKGALVPTVGVICMDMCMLDVTGL-DVQNGDEVIVFNGQLSIADLAQQIGTIPYEILTNI 813

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 814 SQRVKRVY 821


>gi|284801216|ref|YP_003413081.1| hypothetical protein LM5578_0966 [Listeria monocytogenes 08-5578]
 gi|284994358|ref|YP_003416126.1| hypothetical protein LM5923_0920 [Listeria monocytogenes 08-5923]
 gi|284056778|gb|ADB67719.1| hypothetical protein LM5578_0966 [Listeria monocytogenes 08-5578]
 gi|284059825|gb|ADB70764.1| hypothetical protein LM5923_0920 [Listeria monocytogenes 08-5923]
          Length = 368

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +       +    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|163754461|ref|ZP_02161583.1| alanine racemase [Kordia algicida OT-1]
 gi|161325402|gb|EDP96729.1| alanine racemase [Kordia algicida OT-1]
          Length = 369

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 91/370 (24%), Positives = 149/370 (40%), Gaps = 20/370 (5%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVE 66
           L+I+  AL+ N+  + + +  + +  AVVK   YG    ++A  L +   V  F V  + 
Sbjct: 9   LEINFKALQQNFEFLKSKTKADTKFLAVVKAFGYGSDAIEVAKFLQDELNVDYFAVAYIR 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYA 125
           EG  LR       I VL+      +  I       + +      F  +    G   +P  
Sbjct: 69  EGAYLRAAGITTPILVLHPQIVNLKHAIAYNLEPSLYNDRIFNAFAKEAAKQGKKDYPVH 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRT 184
           L+ +TG NRLG    +              +   + SHLA ++D +       Q+  F  
Sbjct: 129 LKFNTGLNRLGFFHTDTDYIFKKLKTLSQIKAVSLFSHLAASEDKNEIDFTKNQIRLFND 188

Query: 185 LISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +++++           + ++SGIL  P  HF + R GI LYG  +       +Q V + +
Sbjct: 189 VVANFEQTFNYKPILHMTNTSGILNYPEAHFDMVRTGIGLYGFGNDPKYDKHLQPVASLK 248

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  I +   GE V Y         + IA   IG+ADG                   G 
Sbjct: 249 SVISQIHRIEKGESVGYNRAFVANDYTTIATIPIGHADGISRQFGNGV----------GS 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G   PI+G + MDM M +IT       GD + IFG     +++A    T +Y++L 
Sbjct: 299 VVINGKKAPIIGNVCMDMLMVNITGIR-CNEGDEVIIFGEGQTAEELASKINTISYEILT 357

Query: 360 RIGTRYAKFY 369
            +  R  + +
Sbjct: 358 AVSQRIKRVF 367


>gi|240167811|ref|ZP_04746470.1| alanine racemase [Mycobacterium kansasii ATCC 12478]
          Length = 392

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 101/379 (26%), Positives = 169/379 (44%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +G+A+  AVVK + YG G  ++A A   AG  +  V +V
Sbjct: 13  LAEAVVDLGAVEHNVRVLREHAGSAQVMAVVKADGYGHGATRVAQAALAAGAAELGVATV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   +SS  Q       +   G +   
Sbjct: 73  DEALALRADGITAPVLAWLHPPGIDFGPALVADVEIAVSSTRQLDELLDAVARTGRTATV 132

Query: 125 ALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
           +++VDTG NR G+      E L     +  +   +L  ++SHL  AD P   +N +Q +R
Sbjct: 133 SVKVDTGLNRNGVPPALYPEMLARLRQAAAEHAIRLRGLMSHLVYADAPQQPINDIQAQR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           FR ++S+ +        A L++SS  +  P+    L RPGI++YG +    +    +   
Sbjct: 193 FRDMLSYAREEGVTFEVAHLSNSSATMARPDLTLDLVRPGIAVYGLSPVPERGEMGLVPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + LI+   AGE VSYG       D+ +A+  IGYADG   +L G          
Sbjct: 253 MTVKCAVALIKSVPAGEGVSYGHTWIAPHDTTVALLPIGYADGVFRSLGGRL-------- 304

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 305 ---EVLINGRRRPGVGRICMDQFVVDLGPGPVDVAEGDEAILFGPGARGEPTAQDWADLV 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R ++ Y
Sbjct: 362 GTIHYEVVTSPRGRISRTY 380


>gi|291550435|emb|CBL26697.1| alanine racemase [Ruminococcus torques L2-14]
          Length = 388

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 156/385 (40%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M     +  +I+L A+  N   M    G   R  AV+K +AYG G   +A        + 
Sbjct: 1   MKQYNRVCARINLDAIAYNMEQMKNRIGQEGRLIAVIKTDAYGHGAVPLAEMFEETPYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
            + V  + E   LR +  +  I +L  + P + + + +  +   + +           + 
Sbjct: 61  GYAVACMGEARTLRAHGIKKPILILGCVFPDEYEEMVEKEIRAAVYTEEMAKGMAEAAVR 120

Query: 118 CGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G +    +++DTG  R+G  + +E+++           ++  + +H A AD+       
Sbjct: 121 SGKTAFLHIKIDTGMGRIGFKVSKESVETISRISKLPNIKMEGMFTHFAKADEFDKSYTF 180

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q E+F  +    +            +S+GI+  P+    L R GIS+YG          
Sbjct: 181 AQHEKFLWMKEQLEKNGVQISYYDCDNSAGIIDFPDMKHDLARAGISIYGMYPSDEVKKD 240

Query: 232 M---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
               +  +   + I  ++    G  +SYGG     +   IA   +GY DGYP +LS    
Sbjct: 241 AVDLKPALELISHISFVKDVEKGTSISYGGTFVAPKKMRIATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G    I+G++ MD  M D+T+    +  D + + G D    I+++
Sbjct: 298 --------KGYVLIHGKRADIVGRVCMDQFMVDVTEIPEAKFMDPVTLVGKDKDAVIRVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D++  SG  NY+ +  +  R  + Y
Sbjct: 350 DLSDLSGRFNYEFVCDLSKRVPREY 374


>gi|260554562|ref|ZP_05826783.1| alanine racemase [Acinetobacter baumannii ATCC 19606]
 gi|260411104|gb|EEX04401.1| alanine racemase [Acinetobacter baumannii ATCC 19606]
          Length = 356

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 98/363 (26%), Positives = 169/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  I  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPIAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 183 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I G
Sbjct: 243 LNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDG 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  +++ G    +DDVA A+GT  Y+LL R+ TR
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELLGNHRLVDDVAEANGTIGYELLCRLSTR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|209548649|ref|YP_002280566.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209534405|gb|ACI54340.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 388

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 186/365 (50%), Positives = 245/365 (67%), Gaps = 2/365 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR AAVVK +AYG+G E    ALY AG +DFFV +V+
Sbjct: 19  LRLTVDLTALTENWRDMAQRSGAARAAAVVKADAYGMGIEDAGEALYMAGARDFFVATVD 78

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P ARIFVL GI PG E+  F+ +L+PVISS  QL F+  +++    +P AL
Sbjct: 79  EGVTLRLYAPDARIFVLSGIWPGTERRFFENDLVPVISSDEQLAFWMAVLADYGDYPCAL 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTGFNRLGL + +A+    +          L++SHLAC D+PS  +N  QLE FR + 
Sbjct: 139 HVDTGFNRLGLHMDDAIALADDVSRPASFAPVLVMSHLACGDEPSHAMNRQQLESFRRVS 198

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG      ++PM+ V TAEARII +R
Sbjct: 199 AAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVCGLANPMRPVATAEARIIQVR 258

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE VSYG   +L R S +A+A+ GYADGY   LS        +V  GG+GFI G+ 
Sbjct: 259 SVEAGETVSYGRALQLRRKSRLAIASAGYADGYMRGLSSGGVPLRQAVPQGGQGFIAGHK 318

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+ITMD+T+FDITD     +  GDY+++FG ++ LDDVA A+GT  Y++L  +G R
Sbjct: 319 VPVAGRITMDLTIFDITDLPDNAVRAGDYVELFGKNMPLDDVARAAGTIGYEILTSMGLR 378

Query: 365 YAKFY 369
           + + Y
Sbjct: 379 HERRY 383


>gi|325688113|gb|EGD30132.1| alanine racemase [Streptococcus sanguinis SK72]
          Length = 369

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 146/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQMTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAREAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLTRF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LISELVHVKEVEAGADVGYGATYTSESQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  S  +  G  + + G      I + DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITVTDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|323340097|ref|ZP_08080362.1| alanine racemase [Lactobacillus ruminis ATCC 25644]
 gi|323092474|gb|EFZ35081.1| alanine racemase [Lactobacillus ruminis ATCC 25644]
          Length = 380

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 27/379 (7%)

Query: 4   NEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+K+N       +  + +  AVVK NAYG G  ++A     AG   F V
Sbjct: 12  HRNAKAVIDLDAIKHNIEIEKKRMRDDQKLFAVVKANAYGHGMIEVARTAKEAGANGFCV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++EG++LR       + +L      Q  +I   +L   +  +  L     L+   G+ 
Sbjct: 72  AIIDEGIELRNAGFDDLVLILGVCPAEQSNVIAANDLSVAVGDLDFLENAKPLLKAQGLK 131

Query: 122 HPYALQVDTGFNRLGLSLQEALD--FTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
               L  DTG  R+G    E +         N    +   I +H ACAD         QL
Sbjct: 132 LKVHLAFDTGMGRIGFVNGEKVHEAEAFMKENSDQFEFEGIFTHFACADTKDDSYYKKQL 191

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQT 234
           E+F  L      +   +   +S+  +   +      R GI++YG      ++     ++ 
Sbjct: 192 EKFNELKDALDDLPPYVHVANSAASMWHDDCGGNAVRYGITMYGLNPSGRELELPCEIKP 251

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
             T E+ ++ +R    G  + YG    +     I    +GYADG+   + G         
Sbjct: 252 AFTLESELVSVRLLEPGTGIGYGKTYTVDEPQWIGTVPLGYADGWLRRMQGF-------- 303

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               K  + G     +G++ MD  M  +     +E G  + + G +    I   DVA  +
Sbjct: 304 ----KVLLNGEYCQSVGRVCMDQFMVRLP--YEMEKGTKVTLIGENGGKRITAQDVADYA 357

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y++L  +  R  + +
Sbjct: 358 DTIHYEILCSVSERVPREF 376


>gi|254827830|ref|ZP_05232517.1| alanine racemase [Listeria monocytogenes FSL N3-165]
 gi|258600211|gb|EEW13536.1| alanine racemase [Listeria monocytogenes FSL N3-165]
          Length = 368

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 158/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A    +AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKDAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKKRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|193077741|gb|ABO12603.2| alanine racemase 1 [Acinetobacter baumannii ATCC 17978]
          Length = 356

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 169/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  I  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPIAIEQKFECVIHHQQQFEWLIKHKQAYITQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHVKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 183 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I  
Sbjct: 243 LNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDS 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|16802927|ref|NP_464412.1| hypothetical protein lmo0886 [Listeria monocytogenes EGD-e]
 gi|224503145|ref|ZP_03671452.1| hypothetical protein LmonFR_11593 [Listeria monocytogenes FSL
           R2-561]
 gi|17433700|sp|O85045|ALR_LISMO RecName: Full=Alanine racemase
 gi|16410289|emb|CAC98964.1| dal [Listeria monocytogenes EGD-e]
          Length = 368

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/378 (25%), Positives = 157/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +       +    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVGGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTITADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|115525335|ref|YP_782246.1| alanine racemase [Rhodopseudomonas palustris BisA53]
 gi|115519282|gb|ABJ07266.1| alanine racemase [Rhodopseudomonas palustris BisA53]
          Length = 404

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 133/364 (36%), Positives = 186/364 (51%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  +   +  A  A VVK + YG G   +  AL  AG + FFV ++EE 
Sbjct: 31  LTIDLDALIANWRRLEKTAVPAECAGVVKADGYGCGAGPVTKALAAAGCKTFFVATLEEA 90

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R   P+A ++VL G+ P        T   PVI S+ +L  +       G     A+ 
Sbjct: 91  RAVRAAAPEAALYVLNGLFPNCGDGFAATGAQPVIGSLDELAEWDVFCRRTGWKGGAAIH 150

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGLS+ EA        N     ++L++SHLACAD  +  +N+ Q+  FR +  
Sbjct: 151 IDTGMNRLGLSIAEAQGIV-PRINAGDHGITLVMSHLACADMLNHPLNAKQVGAFREIAG 209

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASLA+SSGI LG ++ F + RPG +LYG        +PMQ VVT +ARI+ +R+
Sbjct: 210 LFSGVPASLAASSGIYLGSHFGFDMVRPGAALYGINPTPEADNPMQPVVTLQARILQVRE 269

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R S +AV + GYADGY     G D         G    I G   
Sbjct: 270 VERGETVGYGATWTARRASKLAVISAGYADGYFRAAGGSDGTR------GADVIIAGQRC 323

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI G+I+MD+   D+TD        G    + G  I +D++    GT  Y++L  +G RY
Sbjct: 324 PIAGRISMDLLAVDVTDLAPNAARRGQMATLLGDGISVDELGHHFGTIGYEVLTSLGARY 383

Query: 366 AKFY 369
            + Y
Sbjct: 384 QRTY 387


>gi|328945680|gb|EGG39831.1| alanine racemase [Streptococcus sanguinis SK1087]
          Length = 369

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGISKKILVLGVSDLAALPLSRKGKVSLTVASLEWLDLALDAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDNVPPLVHASNSATSLWHSEIVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSKSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPRAYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|260587632|ref|ZP_05853545.1| alanine racemase [Blautia hansenii DSM 20583]
 gi|260541897|gb|EEX22466.1| alanine racemase [Blautia hansenii DSM 20583]
          Length = 382

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 93/385 (24%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M     ++  I+L A+  N  +M + +  N +  AV+K + YG G   IA  +   + + 
Sbjct: 1   MRIQSRIQAHINLDAIDYNLKNMYDYMGKNTQIIAVLKADGYGHGAVPIAKEIEAYSYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
              V +VEEG +LR    +  I +L   +      I   +  P +  +      SK    
Sbjct: 61  GIAVATVEEGRELRKAGIKKPILILGYTYEEDYDRIVKEDFQPTVFKLSMAEQLSKAAVK 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G   +++A+            +L  I +H A AD+       
Sbjct: 121 ANKTLKIHIKLDTGMTRIGYRHIEDAIPEIVEISKLPNIELEGIFTHFARADETDLAPAY 180

Query: 177 VQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            QLE+++  +     +GI       ++S+ I+   + +F   R GI LYG          
Sbjct: 181 QQLEKYQEFLDALKRQGISIPVKHCSNSAAIIRMQDAYFDAVRAGIILYGMYPSNEVEKD 240

Query: 232 ---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +  ++ I  I++   G  +SYGG     + + +A   +GYADGY   LS    
Sbjct: 241 KILLKPAMELKSHIAYIKEVEPGVEISYGGTFTTEKVTRVATIPVGYADGYSRGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G    ILGK+ MD  M D+T+    +  D + + G D    I ++
Sbjct: 298 --------KGSVLIRGKRAKILGKVCMDQFMVDVTEIPEAKELDEVTLLGKDGTDCITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++   SG  NY+    I  R  + Y
Sbjct: 350 ELGELSGRFNYEFACCISKRVPRVY 374


>gi|189347602|ref|YP_001944131.1| alanine racemase [Chlorobium limicola DSM 245]
 gi|189341749|gb|ACD91152.1| alanine racemase [Chlorobium limicola DSM 245]
          Length = 374

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 110/378 (29%), Positives = 160/378 (42%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I L+ L+ N   +   +G   R   +VK NAYG G  ++A  L + GV DF V 
Sbjct: 8   PMAEARIKLSHLEENIRHIRQWTGKKLRIMGIVKANAYGHGVHRVAETLESVGVSDFGVA 67

Query: 64  SVEEGVKLRLYT----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           +++E V LR       P A +     + P  +  +     + V S         K  + G
Sbjct: 68  NIQEAVALRTGGALKKPAAILAFSSPLEPQIDGYLQHDIEMTVCSFDILRAAGEKAAAYG 127

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 ++VDTG  RLGL   E ++   N       +L  I +H A            QL
Sbjct: 128 KKLAVQVKVDTGMGRLGLQPAETMELLRNINRSPDIELKGIYTHFAEGS-KPGGYTGRQL 186

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-- 232
           E FR L++ Y+      I    ASS  IL   +  F + RPGI LYG         P+  
Sbjct: 187 EEFRNLVTQYESESGTTICKHAASSGAILCRKDAWFDMVRPGILLYGYLPDPCMPAPIAV 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             V+  EAR+I I+    G  VSY    +      IA  A GYADGYP  LS        
Sbjct: 247 TPVMQMEARVIFIKTVAPGTSVSYNRTWRAAESRSIATVAAGYADGYPRALSN------- 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASG 351
                G+  I G   P +G +TMD  M D+     ++ GD   +FG      DD+A + G
Sbjct: 300 ----KGRVVINGKSCPQVGTVTMDQIMIDLGKEHDVKTGDKAILFGWEGPTADDIAGSIG 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           + +Y++L  +  R  + +
Sbjct: 356 SISYEVLCSVSNRVVRIF 373


>gi|332669569|ref|YP_004452577.1| alanine racemase [Cellulomonas fimi ATCC 484]
 gi|332338607|gb|AEE45190.1| alanine racemase [Cellulomonas fimi ATCC 484]
          Length = 421

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 158/381 (41%), Gaps = 24/381 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R  +DL A++ N  S+ A + +A+  AVVK +AYG G    A A    G        V
Sbjct: 28  PARAVVDLAAIRGNVRSLAAHAPSAQVMAVVKADAYGHGLVPSARAAVEGGATWLGAAQV 87

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQ--EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            E ++LR         + +   PG      +     + V ++       +       +  
Sbjct: 88  AEALELRRAGVVGPRVLTWLYAPGAPLADAVAAVVDVSVAAAWALDEVVAAARVAHRTAR 147

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLE 180
             L+VDTG  R GL+  +           +     ++  + SHLA AD+P+      Q  
Sbjct: 148 VHLKVDTGLGRNGLTPGDLAALLPAVLRAQAEGAVEVVGVWSHLAFADEPAHPTVRAQAG 207

Query: 181 RFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            F   +     +  +     LA+S+  L  P+ H  L RPGI++YG +            
Sbjct: 208 VFADAVRTVEQAGLRPEVRHLANSAATLTDPSVHHDLVRPGIAVYGLSPVPQVGGPADFG 267

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   +T EA +  ++   AG+ +SY  +    +++++ +  +GYADG P   SG      
Sbjct: 268 LVPAMTFEAELATVKTVPAGQGLSYAHRYVTPQETVVGIVPVGYADGVPRHASGGQDG-- 325

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                GG   + G  + + G++ MD  + D+        GD +++FG          D A
Sbjct: 326 ----PGGPLRVGGRTLAVAGRVCMDQVVVDLGPGACEVAGDRVELFGTGADGGPTAQDWA 381

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
            A+GT  Y+++ R+G R  + 
Sbjct: 382 DAAGTIAYEIVTRVGARVPRV 402


>gi|326405358|ref|YP_004285440.1| alanine racemase [Acidiphilium multivorum AIU301]
 gi|325052220|dbj|BAJ82558.1| alanine racemase [Acidiphilium multivorum AIU301]
          Length = 357

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 129/364 (35%), Positives = 191/364 (52%), Gaps = 12/364 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L ID  A+  NW ++ A       A VVK +AYGLG   IAPAL  AG + FFV +
Sbjct: 2   NHPTLTIDPGAVAANWQALAARHAG-EVAGVVKADAYGLGAALIAPALAAAGCRSFFVAT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR   P ARI VL G  PG+E+ +    L PV+ S+     +        + P 
Sbjct: 61  LDEALSLRALLPAARIGVLNGCPPGEEETMRARELRPVLGSLAACARWRGAAGDDEAPPS 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DTG NRLGL   EA     +        L+ +++HL  A++P +  N+ Q ERF  
Sbjct: 121 FLHLDTGMNRLGLDRDEAAHLIAHPTLLDGLGLTHVMTHLVAAEEPDASANAAQRERFAA 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             + +  +  SLA+SSG+ LGP +   L RPG +LYGG      ++PM+  +   A I+ 
Sbjct: 181 FAARFPWLRTSLANSSGLFLGPGFGSDLARPGYALYGGNPTPTAANPMRPAIALAAPILQ 240

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           IR   +GE V Y G  +  R S IA   +GYADG P +LS   +              +G
Sbjct: 241 IRAIASGETVGYNGTWRAARPSRIATIGVGYADGLPRSLSNRLTARW-----------QG 289

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            ++P+ G+++MD+T FD+T+   I  GD I++ GP   +D +A  +GT  Y++L  +G R
Sbjct: 290 KIIPVAGRLSMDLTTFDVTEHPDIAPGDVIELIGPGHDIDAIAAEAGTIGYEILTSLGPR 349

Query: 365 YAKF 368
           Y + 
Sbjct: 350 YRRV 353


>gi|313892618|ref|ZP_07826205.1| alanine racemase [Dialister microaerophilus UPII 345-E]
 gi|313119015|gb|EFR42220.1| alanine racemase [Dialister microaerophilus UPII 345-E]
          Length = 365

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 154/370 (41%), Gaps = 25/370 (6%)

Query: 11  IDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L AL++N   + +    N    A++K + YG G           G     V  V+EG+
Sbjct: 8   ISLKALRHNLRLIRSTVPENVELMAILKSDGYGHGSIATLNIALEEGYSSAAVARVDEGI 67

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQV 128
           KLR +     I+ L    P    +    ++I  I   V   T  +            L V
Sbjct: 68  KLRQHGFNCPIYTLGLPLPYDMPVGVANDMIMPIDDTVDLKTMEAVAAVSNKEVKVMLTV 127

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           DTG NRLG+ L +  +F          +L    +H+A AD+        QL+ F   +  
Sbjct: 128 DTGMNRLGIHLDKIPEFLKKLKRYPHLKLHGTFTHMATADEKDKTFAIAQLKEFEKALEL 187

Query: 188 --HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARII 243
               K    S A+S+GIL  P   + L RPGI +YG      + K+  +Q V++  +  I
Sbjct: 188 LPKTKDFRISAANSAGILELPQSLYNLARPGIIMYGIYPSGDMKKNLDLQPVMSLISHCI 247

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            ++    GE V YG   K       A   IGYADGYP +LS             G   I 
Sbjct: 248 HVQTLKKGETVGYGATYKAEHMMKTATIPIGYADGYPRSLSN-----------KGYVLIG 296

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLV 359
           G   PI+G+I MD  M  + D  ++  GD + + G      I +++VA  + T  Y+L+ 
Sbjct: 297 GKKRPIVGRICMDQLMVAVDD--TVRTGDQVVLIGEQGNEKITIEEVAELAETIPYELMC 354

Query: 360 RIGTRYAKFY 369
               R  + Y
Sbjct: 355 IF-KRIIRVY 363


>gi|55670437|pdb|1VFH|A Chain A, Crystal Structure Of Alanine Racemase From D-Cycloserine
           Producing Streptomyces Lavendulae
 gi|55670438|pdb|1VFS|A Chain A, Crystal Structure Of D-Cycloserine-Bound Form Of Alanine
           Racemase From D-Cycloserine-Producing Streptomyces
           Lavendulae
 gi|55670439|pdb|1VFS|B Chain B, Crystal Structure Of D-Cycloserine-Bound Form Of Alanine
           Racemase From D-Cycloserine-Producing Streptomyces
           Lavendulae
 gi|55670440|pdb|1VFT|A Chain A, Crystal Structure Of L-Cycloserine-Bound Form Of Alanine
           Racemase From D-Cycloserine-Producing Streptomyces
           Lavendulae
 gi|55670441|pdb|1VFT|B Chain B, Crystal Structure Of L-Cycloserine-Bound Form Of Alanine
           Racemase From D-Cycloserine-Producing Streptomyces
           Lavendulae
          Length = 386

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 158/378 (41%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL A++ N  ++ A +  +   AVVK NAYG G    A A   AG       + EE 
Sbjct: 10  AEIDLDAVRANVRALRARAPRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEA 69

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           ++LR    Q RI        G  +   +T++   +S +       +   + G +    L 
Sbjct: 70  LELRAAGIQGRIMCWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLX 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRT 184
            DTG  R G    +  +    +   +         + SH ACAD+P      +QL+ FR 
Sbjct: 130 ADTGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRD 189

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ----TV 235
           +++             +A+S   L  P  HF L R G+++YG +       P Q      
Sbjct: 190 MLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSPELGTPAQLGLRPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A + L++   AG  VSYG       ++ +A+   GYADG P   SG          
Sbjct: 250 MTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGR--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             G   + G +    G+I MD  + D+ + L  E GD   I G     +   +D A A+ 
Sbjct: 301 --GPVLVAGKIRRAAGRIAMDQFVVDLGEDL-AEAGDEAVILGDAERGEPTAEDWAQAAH 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 358 TIAYEIVTRIGGRVPRVY 375


>gi|41410356|ref|NP_963192.1| alanine racemase [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41399190|gb|AAS06808.1| Alr [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 391

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 163/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +  A+  AVVK + YG G  + A A   AG  +  V +V
Sbjct: 16  LAEALVDLGAIEHNVRLLCEQARGAQVMAVVKADGYGHGAVQTARAALAAGAAELGVATV 75

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +           +      +   +SS  Q     + +   G +   
Sbjct: 76  DEALALRAAGISAPVLAWLHPPGIDFRPALLAGVQIGLSSQRQLDELLTAVRDTGRTATV 135

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDT  NR G+   +          +  ++      ++SH+  AD P++ VN VQ +R
Sbjct: 136 TVKVDTRLNRNGVPPAQYPSMLTALRRAVAEEAIVPRGLMSHMVYADQPANPVNDVQAQR 195

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++  +        A L++SS  +  P+  F + RPGI++YG +         +   
Sbjct: 196 FTDMLAQAREQGVRFEVAHLSNSSATMSRPDLAFDMVRPGIAVYGLSPVPELGDMGLVPA 255

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L G          
Sbjct: 256 MTVKCTVALVKSIRAGESVSYGHTWTAQRDTNLALLPVGYADGIFRSLGGRL-------- 307

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 308 ---QVSINGRRRPGVGRICMDQFVVDLGPGRPDVAEGDEAILFGPGSNGEPTAQDWADLL 364

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 365 GTIHYEVVTSPRGRITRTY 383


>gi|38233177|ref|NP_938944.1| alanine racemase [Corynebacterium diphtheriae NCTC 13129]
 gi|38199436|emb|CAE49080.1| Putative alanine racemase [Corynebacterium diphtheriae]
          Length = 382

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 152/379 (40%), Gaps = 24/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I   A+  N   +  +   A+   VVK + Y  G  ++A  +   G   F V +
Sbjct: 2   NLLETRISCDAIAANTRRLKDMVAPAQLMCVVKADGYNHGAPEVATVMARNGADQFGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY---SKLMSCGVS 121
           + E  +LR       I               D ++     S+  +      +     G  
Sbjct: 62  LAEAHQLRDAGITLPILCWIWSPEQDFSAAIDRDIDLAAVSMDHVRALIAEAMRRPAGTR 121

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++DT  +R G+      +            ++ + SHLACADD  S     Q E 
Sbjct: 122 VRVTVKIDTELHRSGIDEANWTEAFELLHACPQVNVTGVFSHLACADDLESDYTDHQAEV 181

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           FR  IS  + +        LA+S   L  P+ HF + RPG++LYG        H ++  +
Sbjct: 182 FRRAISAGRNVGLDLPVNHLAASPATLTRPDLHFDMVRPGLALYGHEPIAGLDHGLREAM 241

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T    + +++   AG+  SY        D  + V  +GYADG P  + G           
Sbjct: 242 TWIGSVTVVKPIAAGQGTSYNMTWHAPADGYLCVVPVGYADGLPRNVQGHL--------- 292

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALASG 351
             +  I G   P +G++ MD  +  + D+   +  GD   IFGP     + + ++A A+G
Sbjct: 293 --EVTIAGTRYPQVGRVCMDQIVVFLGDNSRGVAPGDEAIIFGPRDTQAMTVTELACATG 350

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T NY++L R   R  + Y+
Sbjct: 351 TINYEILCRPTGRSHRTYS 369


>gi|329957604|ref|ZP_08298079.1| alanine racemase [Bacteroides clarus YIT 12056]
 gi|328522481|gb|EGF49590.1| alanine racemase [Bacteroides clarus YIT 12056]
          Length = 828

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 146/370 (39%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 470 LEVNLGAMIANLNYYRGKLRPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 529

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 530 GSDLRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLEALIKEAEKEGITNFPIH 588

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG +  +          +       + SH   +D          Q+E F  
Sbjct: 589 VKLDTGMHRLGFAPDDMPLLIERLKGQNAVIPRSVFSHFVGSDAPQFDAFTRRQIEIFEK 648

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P   F + R GI LYG +   N    M  V T +
Sbjct: 649 ASMQLQEAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGVSPIDN--SIMNNVSTLK 706

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L                
Sbjct: 707 TTILQIRDVPEEDTVGYSRKGHLVRPSRIAAIPIGYADGLNRHLGNGH----------AY 756

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++   GT  Y++L 
Sbjct: 757 CLVNGQRAPYVGNICMDVCMIDVTDI-DCKEGDSVEIFGDHLPITVLSDVLGTIPYEVLT 815

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 816 SVSTRVKRVY 825


>gi|154483679|ref|ZP_02026127.1| hypothetical protein EUBVEN_01383 [Eubacterium ventriosum ATCC
           27560]
 gi|149735589|gb|EDM51475.1| hypothetical protein EUBVEN_01383 [Eubacterium ventriosum ATCC
           27560]
          Length = 395

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 85/376 (22%), Positives = 154/376 (40%), Gaps = 28/376 (7%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +++L A+  N   M   +        V+K + YG G   IA AL N     + V +  E
Sbjct: 12  AEVNLDAIIKNIEMMREKIKPETGIVGVIKTDGYGHGAVPIAKALENE-CVGYAVATAWE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G  LR +     +++L  +      ++ +  ++P I +      +S        +  + +
Sbjct: 71  GHNLRRHGIDKPLYILGVVPENLCDLVINEEMLPPIFTYKMAKAFSDHAVKLNKTVKFNI 130

Query: 127 QVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            VDTG +R+G    +EA++           ++    +H A AD         Q + +   
Sbjct: 131 AVDTGMSRIGYIPSEEAVNEVVEISKLPNVEIESAFTHFAKADYVDKSFAEKQFKEYNDF 190

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVT 237
           I+  +           A+S+ ++  P     ++R GIS+YG                 ++
Sbjct: 191 IAKVESKGVKIPIHQCANSAAMMEMPETSLTISRAGISMYGLYPSEEMDKDNMKLIPAMS 250

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ ++    G  VSYG      +   IA   +GY DGYP  LS             
Sbjct: 251 IYSHVVYVKNIEKGRGVSYGQTFVADKPMTIATIPVGYGDGYPRNLSN-----------K 299

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           G   I G    ILG++ MD  M D+T  + ++ GD + + G     +I +DD+A  +GT 
Sbjct: 300 GYVLINGKKCNILGRVCMDQFMVDVTG-MDVKEGDKVTLAGKDGSEEILIDDLAALAGTF 358

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+ +  +G R  + +
Sbjct: 359 NYEFVCDLGKRVPRVF 374


>gi|152974082|ref|YP_001373599.1| alanine racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152022834|gb|ABS20604.1| alanine racemase [Bacillus cytotoxicus NVH 391-98]
          Length = 389

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             +++DL A+ NN   +  L   +    AVVK NAYG G   +A     AG     V  +
Sbjct: 10  TWVEVDLDAIYNNVTRIKELIRDDVEIFAVVKGNAYGHGYVPVAKTALEAGATRLAVAFL 69

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I VL    P    +  + ++   +     +    KL +  VS  + 
Sbjct: 70  DEALILRRAGITAPILVLGPSAPRDVNVAAEHDVTLTVFQKEWVEEAIKLWNSPVSMKFH 129

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L  D+G  R+G+  + E   F  +  N    +   + +H A AD+  +     Q   F  
Sbjct: 130 LNFDSGMGRIGIRERGELEGFLRSLENAPFLEFEGVYTHFATADEVETSYFDKQYNTFLE 189

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV---- 235
            +S  + +         A+S+  L      F   R GI++YG T  I  S  +       
Sbjct: 190 QLSWLEKLGVSPRLVHAANSAATLRFHGITFNAVRIGIAMYGVTPSIEISPFLPIQLEAA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  + +  I++ + G+ VSYG   +   +  IA   IGYADG+   L G          
Sbjct: 250 LSLHSTVAHIKQVMKGDGVSYGVTYQTRTEEWIATIPIGYADGWLRRLQGF--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              K  + G  VPI+G++TMD  M  +     + +G  + + G      I   +VA  + 
Sbjct: 301 ---KVLVNGKRVPIVGRVTMDQLMLRLP--YKVSLGTKVTLIGKQGSEYIHAAEVAEYTS 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+++     R  + +
Sbjct: 356 TINYEIITTTSFRVPRIF 373


>gi|294649985|ref|ZP_06727373.1| alanine racemase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824078|gb|EFF82893.1| alanine racemase [Acinetobacter haemolyticus ATCC 19194]
          Length = 356

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 23/364 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID TAL+ N + +  L+ N++  ++VK NAYG G +    AL       F V  +EE ++
Sbjct: 8   IDSTALQYNLNRVKQLAPNSKIVSMVKANAYGHGIKDCLTALAA--TDAFGVACLEEALE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFY--SKLMSCGVSHPYALQ 127
           +R       I ++ G+    E I   +  L  V+    Q+ +    K     +     ++
Sbjct: 66  IRRLGYLQPITLIEGVFSADEMIHVIEQKLECVVHHAQQVEWLLAHKDQYQALDLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E +        +    +  +    A  D     +N  Q  +F  +  
Sbjct: 126 LNSGMNRLGFKVSEIITVIQRLKAEGFNCVLTMHFANADTD---HPLNEQQKMQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIIL 244
             + I AS  +S+ I   P  HF   RPGI LYG +   +K+     ++ V+T  A II 
Sbjct: 183 ACEPILASCCNSAAIYRYPELHFDFVRPGIMLYGASPFADKNVEALDLKPVMTFSAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           + +   GE V YG     T+D  IA+ +IGY DGYP                     I  
Sbjct: 243 LNQIQQGEYVGYGSTYVATQDMTIAIVSIGYGDGYPRAY-----------IKPNFVAIHD 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            ++P++G+++MDM   DI++  + E+G  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLIPVIGRVSMDMIAIDISNL-NAEIGTKVELWGNTRLVDDVAEANGTIGYELLCRLSQR 350

Query: 365 YAKF 368
             + 
Sbjct: 351 PQRR 354


>gi|257870946|ref|ZP_05650599.1| alanine racemase [Enterococcus gallinarum EG2]
 gi|257805110|gb|EEV33932.1| alanine racemase [Enterococcus gallinarum EG2]
          Length = 373

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+K N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAIIDLKAIKENVENEVARLPKATDLFAVVKANGYGHGAIETATAALEGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
            +V+EG++LR       I VL  +      ++   NL   +S+   L   +  +      
Sbjct: 66  ATVDEGIELREAGFSEPILVLGIVSVADIGLLSYYNLSFPVSTNEWLQEAAAFLQKNPVT 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VDTG  R+G    +E L        + L     + +H A AD         Q
Sbjct: 126 NPLKVHLKVDTGMGRIGFISNEELLSAVKWLQEQSLFTWEGVFTHFATADQADDTYWQEQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            +RF+T ++    +   +   +S+  L        + R GI++YG       + +++P++
Sbjct: 186 NQRFQTALACLPELPRYVHAGNSATALWHAEAVGNMVRYGIAMYGLNPSGTALPETYPLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + ++ ++    G  + YG      +   I    IGYADG+   + G        
Sbjct: 246 PALSLVSELVQVKLLEKGAGIGYGETYITPQAEWIGTVPIGYADGWLRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                   + G    I+G++ MD  M  +  S     G  + + G D    I +  VA  
Sbjct: 301 -------LVAGEYCEIVGRVCMDQLMIRLPRSFPA--GTKVTLIGEDNGQCITMQKVAEQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y++   +  R  + Y
Sbjct: 352 LETIHYEVACTLSARVPREY 371


>gi|189485368|ref|YP_001956309.1| alanine racemase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
 gi|170287327|dbj|BAG13848.1| alanine racemase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
          Length = 385

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 100/375 (26%), Positives = 170/375 (45%), Gaps = 26/375 (6%)

Query: 8   RLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++ID +    N   +   ++ + +   V+K NAYG G   +A     AGV    ++S+E
Sbjct: 21  WVEIDRSDFHFNLKKIKEYIAKDTKIMVVIKANAYGHGGVALAKETQRAGVAWIGISSLE 80

Query: 67  EGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
           EG++ R    ++ I +L  I P    ++    +L P IS++  L               +
Sbjct: 81  EGIQFREAGIKSNILILGNIFPFENFQVAVAHSLTPTISTMSGLAALEYWAVRLNKKINF 140

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G  R+G+  + +              ++ + +H A AD         QL+ F  
Sbjct: 141 HLKIDSGMGRIGVVPEASYPILQKIVQMPKTNMTGMYTHFAVADTDPV-FTQQQLDIFTN 199

Query: 185 LISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVT 237
           ++   +        A  A+S+ +      H  + RPGIS+YG T   +      +++V++
Sbjct: 200 IVKFARINLGLKFIAHAANSAALFRNKRTHLDMVRPGISIYGLTPFKHAERFLKLKSVLS 259

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + +II ++K  AG  VSYG      R S+IA   +GYADGY   LS             
Sbjct: 260 WKTKIIFLKKVPAGFCVSYGRTFVTNRASVIATIPVGYADGYNRLLSNKCD--------- 310

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               ++G   PI G+ITMDMTM D+TD   + +GD + + G      IK+D++A    T 
Sbjct: 311 --VLVRGKRCPIAGRITMDMTMIDVTDVKGVTLGDEVVLIGVQGKEHIKVDELAKIQNTI 368

Query: 354 NYDLLVRIGTRYAKF 368
           NY++   I  R  + 
Sbjct: 369 NYEVTSSISVRVPRI 383


>gi|288799885|ref|ZP_06405344.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 299 str. F0039]
 gi|288333133|gb|EFC71612.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 299 str. F0039]
          Length = 825

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 93/374 (24%), Positives = 155/374 (41%), Gaps = 25/374 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L+AL  N +   + L  + +   ++K N YGLG  ++A  L +  V    V   
Sbjct: 463 TTLEVNLSALVQNLNFYRSYLKQDTKLVCMIKANGYGLGAVEVAKTLQDHRVDYLAVAVA 522

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR +   A I ++        K IFD  L P + S   L    +         +P
Sbjct: 523 DEGVALRKHGVTANIMIMNPEMSS-FKTIFDYELEPEVYSFRLLEALIEEAEKEGITQYP 581

Query: 124 YALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             +++DTG +RLG       E L          +   S+    +    D     ++ Q  
Sbjct: 582 IHIKLDTGMHRLGFDPINDIERLISILKKHQNTIIPRSVFSHFVGSDSDHFDDFSAQQFS 641

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F T            I   + +S+GIL  P+    + R G+ LYG   + N+       
Sbjct: 642 LFDTASKQLQSAFTHHILRHINNSAGILHFPDRQLDMCRLGLGLYGINSRDNQIINNVC- 700

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    I+ + K  + E V Y  +  + R++++A   IGYADG    L            
Sbjct: 701 -SLRTTILQMHKIGSNETVGYSRKGTVERETIVAAIPIGYADGLDRRLGNR--------- 750

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
                 + G+  P LG I MD+ M D+TD    + GD ++IFG ++ +  ++    T  Y
Sbjct: 751 -NCYCLVNGHKAPYLGNICMDVAMIDVTDIP-CKEGDSVEIFGDNLPVTVLSDTLDTIPY 808

Query: 356 DLLVRIGTRYAKFY 369
           ++L  I  R  + Y
Sbjct: 809 EVLTSISERVKRVY 822


>gi|218768673|ref|YP_002343185.1| alanine racemase [Neisseria meningitidis Z2491]
 gi|20137238|sp|Q9JTA6|ALR_NEIMA RecName: Full=Alanine racemase
 gi|121052681|emb|CAM09022.1| alanine racemase [Neisseria meningitidis Z2491]
 gi|319410904|emb|CBY91298.1| alanine racemase [Neisseria meningitidis WUE 2594]
          Length = 352

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASVYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|329121169|ref|ZP_08249797.1| alanine racemase [Dialister micraerophilus DSM 19965]
 gi|327470251|gb|EGF15712.1| alanine racemase [Dialister micraerophilus DSM 19965]
          Length = 365

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 153/370 (41%), Gaps = 25/370 (6%)

Query: 11  IDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L AL++N   + +    N    A++K + YG G           G     V  V+EG+
Sbjct: 8   ISLKALRHNLRLIRSTVPENVELMAILKSDGYGHGSIATLNIALEEGYSSAAVARVDEGI 67

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQV 128
           KLR +     I+ L    P         ++I  I   V   T  +            L V
Sbjct: 68  KLRQHGFNCPIYTLGLPLPYDMPAGVANDMIMPIDDTVDLKTMEAVAAVSNKEVKVMLTV 127

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           DTG NRLG+ L +  +F          +L    +H+A AD+        QL+ F   +  
Sbjct: 128 DTGMNRLGIHLDKIPEFLKKLKRYPHLKLHGTFTHMATADEKDKTFAIAQLKEFEKALEL 187

Query: 188 --HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARII 243
               K    S A+S+GIL  P   + L RPGI +YG      + K+  +Q V++  +  I
Sbjct: 188 LPKTKDFRISAANSAGILELPQSLYNLARPGIIMYGIYPSGDMKKNLDLQPVMSLISHCI 247

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            ++    GE V YG   K       A   IGYADGYP +LS             G   I 
Sbjct: 248 HVQTLKKGETVGYGATYKAEHMMKTATIPIGYADGYPRSLSN-----------KGYVLIG 296

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLV 359
           G   PI+G+I MD  M  + D  ++  GD + + G      I +++VA  + T  Y+L+ 
Sbjct: 297 GKKRPIVGRICMDQLMVAVDD--TVRTGDQVVLIGEQGNEKITIEEVAELAETIPYELMC 354

Query: 360 RIGTRYAKFY 369
               R  + Y
Sbjct: 355 IF-KRIIRVY 363


>gi|116872288|ref|YP_849069.1| alanine racemase [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|123460815|sp|A0AH04|ALR_LISW6 RecName: Full=Alanine racemase
 gi|116741166|emb|CAK20286.1| alanine racemase [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 368

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 155/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +    L  N    AVVK NAYG G  + A     AG + F V
Sbjct: 6   HRPTWIEIDREAIRANIKNEQHRLPENVALWAVVKANAYGHGIIETAKTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +    ++ G    ++  +   N I   S       +   ++     
Sbjct: 66  AILDEALALREAGFRNDFILVLGATRQEDANLAAKNNI---SLTVFREDWLHNLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA              L  I +H A AD   +     QL++
Sbjct: 123 RIHLKVDSGMGRLGIRSTEEAKQIEARIALDHQLILEGIYTHFATADQLETSYFEQQLDK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA- 238
           F T+++ ++     +   +S+  LL P   F   R GIS+YG T  +   + +   +   
Sbjct: 183 FTTILTSFESRPTFVHTANSAASLLQPQMDFDAVRFGISMYGLTPSLEIKNSLPFELKPA 242

Query: 239 ---EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                 ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEKEWVATLPIGYADGLIRHYSGY--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A   G
Sbjct: 294 ---HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGTDHGNTITADDAADYLG 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLSDRIPRKY 366


>gi|159901277|ref|YP_001547524.1| alanine racemase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894316|gb|ABX07396.1| alanine racemase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 851

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 22/374 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++IDL AL +N  ++    G     AV+K +AYG G  + A  +   G     V 
Sbjct: 481 DRPTTVRIDLDALASNVQAIRQAVG-VPVMAVLKADAYGHGAVRSARTVLLNGASSLAVA 539

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++ E + LR     A I +L      Q +      +   +          +     G+  
Sbjct: 540 TLGEALHLRQADIAAPILILGYTPTWQMREALLNRISVALFDRHVAQSLHEQALALGLKA 599

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++DTG  RLGL++++A+DF          ++  I +H A AD+  +    +QL+RF
Sbjct: 600 QVHIKIDTGMARLGLAVEQAVDFIEWLQGLAGIEVVGIFTHFANADEADASFFGLQLQRF 659

Query: 183 RTLISH--YKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           +TL+     +G+   +    +S+  ++ P+  + + R GI+LYG     +    +Q V+ 
Sbjct: 660 QTLLDQLTQRGLRPPVVHAANSAAAMVHPSARYDMVRAGIALYGIDPSSDVHLNLQPVLE 719

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +  +  +R+  AG  +SYG     +R S IA   +GYADG+                  
Sbjct: 720 FQTEVAQVRELPAGSPISYGCTFVTSRISRIATIPVGYADGFRRAPQPWR---------- 769

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G  VP++G++ MD  M D+T+  S++ GD + + G      I+ ++VA   GT 
Sbjct: 770 -EVLIHGQRVPVVGRVCMDYAMIDVTELDSVQRGDQVVLIGQQGTDRIRAEEVAEWLGTN 828

Query: 354 NYDLLVRIGTRYAK 367
            Y+++  I  R  +
Sbjct: 829 AYEVVSAILPRVPR 842


>gi|52000508|dbj|BAD44772.1| alanine racemase [Streptomyces lavendulae subsp. lavendulae]
          Length = 378

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 159/378 (42%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL A++ N  ++ A +  +   AVVK NAYG G    A A   AG       + EE 
Sbjct: 10  AEIDLDAVRANVRALRARAPRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEA 69

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           ++LR    Q RI        G  +   +T++   +S +       +   + G +    L+
Sbjct: 70  LELRAAGIQGRIMCWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLK 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRT 184
            DTG  R G    +  +    +   +         + SH ACAD+P      +QL+ FR 
Sbjct: 130 ADTGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRD 189

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ----TV 235
           +++             +A+S   L  P  HF L R G+++YG +       P Q      
Sbjct: 190 MLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSPELGTPAQLGLRPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  A + L++   AG  VSYG       ++ +A+   GYADG P   SG          
Sbjct: 250 MTLRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASGR--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             G   + G +    G+I MD  + D+ + L  E GD   I G     +   +D A A+ 
Sbjct: 301 --GPVLVAGKIRRAAGRIAMDQFVVDLGEDL-AEAGDEAVILGDAERGEPTAEDWAQAAH 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 358 TIAYEIVTRIGGRVPRVY 375


>gi|229821553|ref|YP_002883079.1| alanine racemase [Beutenbergia cavernae DSM 12333]
 gi|259710063|sp|C5BZY7|ALR_BEUC1 RecName: Full=Alanine racemase
 gi|229567466|gb|ACQ81317.1| alanine racemase [Beutenbergia cavernae DSM 12333]
          Length = 378

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 153/379 (40%), Gaps = 27/379 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R  +DL A+  N   +  ++G A   AVVK +AYG G   +A A   AG     V  +
Sbjct: 4   PARAVVDLGAIAGNVARLREVAGPAEVMAVVKGDAYGHGLVPVARAALGAGATWLGVAQL 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E + LR     AR                  +L   +++              GV    
Sbjct: 64  GEALTLRAAGVDARTLTWLYAPGAPLAEALRADLDLSVAAPWALDEVVGAARESGVVARV 123

Query: 125 ALQVDTGFNRLGLSLQEA---LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L+VDTG  R GL L E    LD    +       +  + SHLA ADD  S + + Q   
Sbjct: 124 HLKVDTGMGRSGLFLDEWGGLLDAAVRAQAAGEIDVVGVWSHLASADDAESGLTAEQTRV 183

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQ 233
           F   +   +          LA+S+G L     HF L RPGI++ G +   ++      + 
Sbjct: 184 FAEAVRRAEDAGAHLEVRHLANSAGTLAHAATHFDLVRPGIAVVGLSPFGDRTADELGLT 243

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  EA + +++ A AG+ VSYG +   +  + +AV  +GYADG P    G        
Sbjct: 244 PAMRLEAELTIVKHAPAGQGVSYGHEYTTSEATSLAVVPLGYADGIPRHAGG-------- 295

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   +      I G++ MD  + D+    +   GD   +FG     +    D A A
Sbjct: 296 ---AGPVQVGDTWSRIAGRVCMDQFVLDLGAGANAHAGDVAVLFGSGADGEPTAADWARA 352

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           + T  Y+++ R+G R  + 
Sbjct: 353 ADTITYEIVTRLGPRVPRV 371


>gi|91215530|ref|ZP_01252501.1| alanine racemase [Psychroflexus torquis ATCC 700755]
 gi|91186482|gb|EAS72854.1| alanine racemase [Psychroflexus torquis ATCC 700755]
          Length = 367

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            RL+IDL AL+ N+  + + LS   +   VVK  AYG     I   L   GVQ   V  +
Sbjct: 7   TRLEIDLQALEYNYKLLKSYLSTKTKIMGVVKAFAYGTDSIIIGKHLVKIGVQHLAVAYI 66

Query: 66  EEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEGV+LR    +A I V Y      Q+ I F            +       +    S   
Sbjct: 67  EEGVRLRKAGVEAPILVFYPQLEEIQKLIDFQLTPSVYNHRFLEGLCEELALHEIDSFGI 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFR 183
            L+++TG NRLG  + +      +   ++  ++  + +HLA + +         Q+ +F 
Sbjct: 127 HLKINTGLNRLGFEIDDLNTILQHLKAERKIKMVGLFTHLAASGNKDEVEFTKGQISKFE 186

Query: 184 TLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                ++       E+ + +SSGIL  P+  + + R GI+LYG  +   +   ++ V + 
Sbjct: 187 QARQFFENHLPYIFESHICNSSGILNYPDAEYDMVRAGIALYGYGNNPKEHKMLKAVASL 246

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I  +R    G+ V Y  + K  R++ IA   +GYADG   +                
Sbjct: 247 KTVIAQLRMIQKGDSVGYERKFKAERETKIATLPLGYADGISRSFGNG----------KA 296

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           +  I     PI+G + MD  M D+T     E GD ++IFG +  + D  +   T  Y+++
Sbjct: 297 QVLINHQKAPIIGNVCMDTLMLDVTGI-DCEEGDEVEIFGKNHTVLDFDIEQQTIPYEVI 355

Query: 359 VRIGTRYAKF 368
            RI  R  + 
Sbjct: 356 TRISQRVTRV 365


>gi|296115772|ref|ZP_06834398.1| alanine racemase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977749|gb|EFG84501.1| alanine racemase [Gluconacetobacter hansenii ATCC 23769]
          Length = 390

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 128/368 (34%), Positives = 189/368 (51%), Gaps = 16/368 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAA-VVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL A+  N+  +          A VVK +AYGLG  ++APAL  AG   F+V  +
Sbjct: 30  ATLRIDLDAIAANYRLVRDRVSPTTICAAVVKADAYGLGLTQVAPALQRAGADHFYVAHL 89

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           EEG+ LR + TP  RIFVL+G  P  E+     +L PV++S  Q+  + +         P
Sbjct: 90  EEGIALRRHVTPATRIFVLHGPLPDTEEEFTAHDLTPVLNSAGQVAGWRALARRLDRVLP 149

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             +Q+DTG +R GLS+ +      ++      +  L+ISHLACAD P +  N+ Q  R  
Sbjct: 150 AVIQLDTGMSRFGLSMADVRAIADDAGLLAGIRPDLVISHLACADTPQNPANAQQRARLL 209

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            + +       +L++SSGI LGP+YHF + RPG +LYG       ++P++ VV   ARI+
Sbjct: 210 EMAAMLPAAPLALSASSGIFLGPDYHFDMVRPGAALYGIAPNEATANPLRPVVRLSARIL 269

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R  +AG+ V YG   + +    IA    GYADG                   G  +  
Sbjct: 270 QVRDIVAGDGVGYGLTYRASGPRRIATIGAGYADGCLRQ-----------GAHHGAAWFG 318

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVG-DYIQ-IFGPDIKLDDVALASGTTNYDLLVRI 361
              +PILG+I+MD    DITD    ++G D    + GP   +D  A A+GT  Y++L  +
Sbjct: 319 ATRLPILGRISMDSITIDITDVPVGQLGPDMAVDLLGPHYDVDAAARAAGTIGYEILTSL 378

Query: 362 GTRYAKFY 369
           G RY + Y
Sbjct: 379 GHRYHRAY 386


>gi|94310342|ref|YP_583552.1| alanine racemase [Cupriavidus metallidurans CH34]
 gi|166969425|sp|Q1LNJ3|ALR_RALME RecName: Full=Alanine racemase
 gi|93354194|gb|ABF08283.1| alanine racemase 2, PLP-binding protein [Cupriavidus metallidurans
           CH34]
          Length = 368

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 156/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN   +   +  +R  AVVK NAYG G  ++   L       F +  
Sbjct: 3   RPIQAVIHQPALANNLEVVRRQAPASRIWAVVKANAYGHGIRRVFAGLKA--ADGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR    Q  I +L GI   Q+  + +   +       +     +L         
Sbjct: 61  LSEAVLLRDLGWQGPILLLEGIFQAQDVPLLEQYRLTTAVHCEEQLRMLELARPKGPLAI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG NRLG    +       +         + ++H + AD       + Q+E F  
Sbjct: 121 QLKLNTGMNRLGFRPAQYRAAWERARTMSCIGSIVHMTHFSDADSKRGI--AHQVEAFEA 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
             ++  G E S+A+S+ +L  P  H    RPGI LYGG+            +Q  ++  +
Sbjct: 179 ATANLPG-EVSMANSAAVLWHPQAHRNWVRPGIILYGGSPTGVSSDIAETGLQPAMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I I+    G+ V YG      R   + V A GYADGYP    G     +P        
Sbjct: 238 ELIGIQDLQPGDTVGYGSMFTADRAMRVGVVACGYADGYPRHAVGWGERRAP-------V 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T     +VG  + ++G  + +DDVA ASGT  Y+L+  
Sbjct: 291 LVDGVRTQLVGRVSMDMICVDLTPCPKAKVGTPVTLWGHGLPIDDVAAASGTVGYELMCA 350

Query: 361 IGTRYA 366
           +  R  
Sbjct: 351 LAPRVP 356


>gi|299141374|ref|ZP_07034511.1| Mur ligase domain protein/alanine racemase [Prevotella oris C735]
 gi|298577334|gb|EFI49203.1| Mur ligase domain protein/alanine racemase [Prevotella oris C735]
          Length = 825

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 99/373 (26%), Positives = 158/373 (42%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+  N +   + +  + +   ++K +AYG G  +IA  L +  V    V   
Sbjct: 464 TTLEVNLNAVVKNLNHYRSFMKPHTKLVCMIKADAYGAGSVEIAKTLQDHRVDYLAVAVA 523

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 524 DEGVTLRKNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLDALVKEAEKEGITGFP 582

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG     +  +       +       + SH   AD D     ++ Q E 
Sbjct: 583 VHIKLDTGMHRLGFDPHKDMDELIRRLKRQNAIIPRSVFSHFVGADSDDFDTFSAQQFEL 642

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F+             I   + +S+GI   P+    + R G+ LYG   + NK     +  
Sbjct: 643 FKLGADKLQAAFDHKILFHMDNSAGIEHFPDRQMDMCRLGLGLYGINSRNNKIINNVS-- 700

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ I +  AGE + Y  +  L RDSLIA   IGYADG    LS            
Sbjct: 701 TLKTTILQIHQLPAGESIGYSRKTYLERDSLIAAIPIGYADGLDRRLSNRR--------- 751

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++ A  T  Y+
Sbjct: 752 -GYCLVNGQKAEYVGNICMDVAMIDVTDI-DCKEGDSVEIFGDHLPVTVLSDAIDTIPYE 809

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 810 VLTGISNRVKRVY 822


>gi|268597531|ref|ZP_06131698.1| alanine racemase [Neisseria gonorrhoeae FA19]
 gi|291043413|ref|ZP_06569134.1| alanine racemase [Neisseria gonorrhoeae DGI2]
 gi|268551319|gb|EEZ46338.1| alanine racemase [Neisseria gonorrhoeae FA19]
 gi|291012649|gb|EFE04634.1| alanine racemase [Neisseria gonorrhoeae DGI2]
          Length = 375

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            NEF+R   ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     
Sbjct: 20  RNEFMRPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADG 77

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +++EG++LR       I +L G+    E    +   +                   
Sbjct: 78  FAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWK 137

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+
Sbjct: 138 KPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQM 197

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E F       +G E SLA+S+ IL  P       R G++LYG +        ++ V+   
Sbjct: 198 EAFDLGTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLS 256

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            RI   R       + YG     ++ + + + A GYADGYP                   
Sbjct: 257 TRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSP 305

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+ 
Sbjct: 306 VAVDGKLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMC 364

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 365 NI-KRAKFTY 373


>gi|322386107|ref|ZP_08059744.1| alanine racemase [Streptococcus cristatus ATCC 51100]
 gi|321269876|gb|EFX52799.1| alanine racemase [Streptococcus cristatus ATCC 51100]
          Length = 368

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 150/376 (39%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL+A+  N   + A    + +  AVVK NAYG G   ++  +    V  F V
Sbjct: 6   HRPTKAVIDLSAIAFNIEQIAAHIPQSVQKWAVVKANAYGHGAVPVSQHIQPL-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +     +   ++S+  L       +     
Sbjct: 65  SNIDEALELREAGIAKSILILGVSSLEAVPLAIQQQITLTVASLAWLEELLNQQADLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++D+G  R+G    +      +        +  I +H A AD+  +     QL RF
Sbjct: 125 TVHIKIDSGMGRIGFRDSQEAQQAISRLQAAGAVVEGIFTHFATADELDTSHFVAQLNRF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + ++S    +   +   +S+  L          R G  +YG       ++  + ++  ++
Sbjct: 185 KEILSELAFLPPVVHASNSATTLWHSETIMNAVRLGDIIYGLNPSGRVLDLPYEVKPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ +++  AG  V YG         +I    +GYADG+   + G D          
Sbjct: 245 LESALVHVKEIQAGAHVGYGATYTSDSQQIIGTIPLGYADGWTRDMQGFD---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               I G   PI+G+++MD     +     +  G  + + G      I   DVA   GT 
Sbjct: 295 --VLIDGQRCPIVGRVSMDQITVRLPRVYPL--GTQVVLIGQSGAELITATDVAEKRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 351 NYEVVCLISDRVPREY 366


>gi|221196747|ref|ZP_03569794.1| alanine racemase [Burkholderia multivorans CGD2M]
 gi|221203416|ref|ZP_03576435.1| alanine racemase [Burkholderia multivorans CGD2]
 gi|221177350|gb|EEE09778.1| alanine racemase [Burkholderia multivorans CGD2]
 gi|221183301|gb|EEE15701.1| alanine racemase [Burkholderia multivorans CGD2M]
          Length = 373

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + + + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELVERHRLTVAVHCDEQLDLLIAARPQQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QL +F  
Sbjct: 121 QLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADEGE---IDWQLAQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             +   G E +L++S+  L  P  H    RPG  LYG +           P+   +T  +
Sbjct: 178 ATAGIPG-ERTLSNSAAALWHPRAHRDWVRPGTILYGASPTGASRHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++   AGE V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQSLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|167563210|ref|ZP_02356126.1| alanine racemase [Burkholderia oklahomensis EO147]
 gi|167570394|ref|ZP_02363268.1| alanine racemase [Burkholderia oklahomensis C6786]
          Length = 356

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   + +++  A+VK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLTVVRRHAAHSKVWAIVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTAVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + Q+  F  
Sbjct: 121 QLKMNSGMNRLGYTPEKFRAAWERARACPGIGQITLMTHFSDADSERG--VADQIATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAEGIAGAR-SLANSAAVLWHPSTHFDWVRPGIMLYGASPSGRSADIADKGLKPTMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTLAKGQTVGYGSMFAAQDTMRIGVVACGYADGYPRIA-----------PEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+  
Sbjct: 287 VVDGVRTRIVGRVSMDMITVDLTPVPQAGVGSRVELWGETLPIDDVAAQCGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|86361167|ref|YP_473054.1| alanine racemase protein [Rhizobium etli CFN 42]
 gi|86285269|gb|ABC94327.1| alanine racemase protein [Rhizobium etli CFN 42]
          Length = 377

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E 
Sbjct: 23  LTIDLAALGRNYSKLASMLAPVRAGAVVKADAYGLGAERVAQTLYDQGCRHFFVAQFVEA 82

Query: 69  VKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           V+LR    + A+IFVL G+ PG E    ++ ++PV++S+ Q   +         S P  L
Sbjct: 83  VRLRPALAKAAQIFVLNGLQPGSELACAESGIVPVLNSLAQWRQWSETARRLKRSLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +      +    ++  I+SHLACADD  S  N  Q+     + 
Sbjct: 143 QFDTGMSRLGFPEEERAELAAAIRDGANVEILFIMSHLACADDLESSQNGEQIAEMARIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG       +PM+ V+  +  ++  R
Sbjct: 203 DEFPGFDISFANSGGVFLGDAYHGVLARPGIALYGGAPNAGGKNPMEPVLRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              +G  + YGG       + +A  A GYADG P +L              G  + KG  
Sbjct: 263 TVPSGTKIGYGGAYVTRSQTRLATIAAGYADGLPRSLGDR-----------GAVYHKGTR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DIT      + +G  +++ GP+  L+DVA  +GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDITALPEGALSLGSLVEVLGPNQTLEDVAGDAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YDRHY 376


>gi|293398716|ref|ZP_06642892.1| alanine racemase [Neisseria gonorrhoeae F62]
 gi|291610856|gb|EFF39955.1| alanine racemase [Neisseria gonorrhoeae F62]
          Length = 375

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            NEF+R   ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     
Sbjct: 20  RNEFMRPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADG 77

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +++EG++LR       I +L G+    E    +   +                   
Sbjct: 78  FAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWK 137

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+
Sbjct: 138 KPVKVWLKMDSGMHRTGFFPHDYTSAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQM 197

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E F       +G E SLA+S+ IL  P       R G++LYG +        ++ V+   
Sbjct: 198 EAFDLGTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLS 256

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            RI   R       + YG     ++ + + + A GYADGYP                   
Sbjct: 257 TRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSP 305

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+ 
Sbjct: 306 VAVDGKLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMC 364

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 365 NI-KRAKFTY 373


>gi|325693570|gb|EGD35489.1| alanine racemase [Streptococcus sanguinis SK150]
          Length = 369

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 144/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   +   L       AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAQLPQTTEKWAVVKANAYGHGAIEVSRYIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALSLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSKSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPRAYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|320536161|ref|ZP_08036211.1| alanine racemase [Treponema phagedenis F0421]
 gi|320146997|gb|EFW38563.1| alanine racemase [Treponema phagedenis F0421]
          Length = 379

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 100/383 (26%), Positives = 156/383 (40%), Gaps = 29/383 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +  I L  L+ N   +   L    +    VK +AYG G  ++A A   AGV    V 
Sbjct: 2   RATKAIIHLDNLQYNIAEIKKRLKPGVKICLPVKADAYGHGAFRVAVAAIRAGVSSLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVSH 122
           S++EG+ LR     A I  L      +   I + N+ P VI S        +        
Sbjct: 62  SIQEGIDLRNAGIVAPIISLSLPILEEIHSIIEYNIHPLVIDSEFIHALNEEAARMKTVQ 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQL 179
              L++DTG NR+G   ++A+            +L  + +H + AD  S         QL
Sbjct: 122 AVHLKIDTGMNRIGCKPEDAITLAAEIVQLPNLKLEGVCTHFSVADSVSPENIAYTKKQL 181

Query: 180 ERFRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDK--INKSHPM 232
             F   +     KGI+  +  ++     L  P   F + RPGI +YG      +    P+
Sbjct: 182 ALFTQTLDALRAKGIDPGIVHAANSGAVLQYPEAQFDMVRPGIIVYGYPPSDCLADKIPL 241

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+   ++++LI+    G  +SY  +    +D+ IA   IGYADG    LS        
Sbjct: 242 KPVMELVSQVVLIKCTPQGSDISYDRKWHADKDTFIATLPIGYADGLMRALS-------- 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP------DIKLDDV 346
               G K  I     PI+G+I MD  M D+    ++   D   IFGP      +    ++
Sbjct: 294 ---PGLKVRIGDTFYPIVGRICMDQCMVDLGSEPTVTRWDTAVIFGPSENSVKNNSAKEL 350

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  +GT  Y++   I  R  + Y
Sbjct: 351 ATIAGTIPYEITCDINKRVPRVY 373


>gi|187250740|ref|YP_001875222.1| alanine racemase [Elusimicrobium minutum Pei191]
 gi|186970900|gb|ACC97885.1| Alanine racemase [Elusimicrobium minutum Pei191]
          Length = 369

 Score =  269 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 88/378 (23%), Positives = 145/378 (38%), Gaps = 28/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFV 62
                 IDL  LK+N + + +L +   +   V+K NAYG G  K+A              
Sbjct: 6   RPTAAVIDLENLKHNINYVRSLLNPKTKMLFVLKANAYGHGAVKLAKYAQENNLCDMLGT 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMSCGV 120
            SVEEGV+LR    +  + VL  ++P +           I + S                
Sbjct: 66  ASVEEGVELRENGIKLPVLVLGSVYPFEAFETAAAYDLAITIASLSAAKAVCEIASKINK 125

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    ++ DTG  R+G                K   +  + +HL+  D       S QL 
Sbjct: 126 TVYCHVKQDTGMGRIGTRRTGVAKILQELKQNKNIIIEGLYTHLSSTDS-DEVFTSCQLG 184

Query: 181 RFRTLI----SHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F        +    +E     ++ G L  P   F + R G+  YG    + +    + V
Sbjct: 185 YFEEAALAAKADNIDVEIFHACATMGTLFAPRGRFDMVRLGLGAYGM---VKEDKNFKPV 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ +++I+ ++       +SY       +   IA   +GY DGY   +SG          
Sbjct: 242 LSLKSKIVFVKDVKKDFAISYNQSFIAPKQMHIATVPVGYGDGYMRAMSG---------- 291

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              +  I G    ++G ITMDM M D+TD     VGD + + G     +I   ++A  + 
Sbjct: 292 -KAEVLIAGKRCKVIGNITMDMIMVDVTDVQEATVGDEVVLIGKQGDEEITAWELASWAN 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++   I  R  +FY
Sbjct: 351 TIAYEITTLITARVPRFY 368


>gi|253996549|ref|YP_003048613.1| alanine racemase [Methylotenera mobilis JLW8]
 gi|253983228|gb|ACT48086.1| alanine racemase [Methylotenera mobilis JLW8]
          Length = 361

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 156/365 (42%), Gaps = 13/365 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L AL++N   ++  + +++  AVVK N YG G   +A  L       F V  
Sbjct: 2   RPILTTVSLNALRHNLSVVHKFAPHSKIMAVVKANGYGHGLINVAHGLSA--ADGFAVLG 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G+   QE  +     + V+          +          
Sbjct: 60  INEAMDLRDAGFQQTILLLEGVFCAQELNVASNLGLNVVIHSQPQLEMLESAVLNKPMHV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   +            +      +++H A ADD +      Q      
Sbjct: 120 HLKMNSGMNRLGFQPEAFNRAYERLLACENVADITLMTHFATADDETGI---EQPYNLFK 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
             +    +  SLA+S+ IL  P  H    RPGI LYG +   +    ++ +   +   + 
Sbjct: 177 TTTQGLNLPVSLANSATILRHPKAHADWVRPGIMLYGASPVGDTAAATYGLMPAMQFTSE 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +++  AGE V YG +   TR + I + A GYADGYP                G    
Sbjct: 237 IIGVQEVKAGETVGYGNRFTATRSTRIGIVACGYADGYPRHAG-----LVSGQSSGAPIA 291

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +   LG+++MDM   D+TD  +  +G  ++++G  + +D VA AS T  Y+LL  +
Sbjct: 292 VAGQLTNTLGRVSMDMLFCDLTDIPNANIGSPVELWGKQVPVDAVAAASDTVGYELLCAV 351

Query: 362 GTRYA 366
             R  
Sbjct: 352 APRVP 356


>gi|309378149|emb|CBX23217.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|169795500|ref|YP_001713293.1| alanine racemase 1, biosynthetic [Acinetobacter baumannii AYE]
 gi|213158560|ref|YP_002319858.1| alanine racemase [Acinetobacter baumannii AB0057]
 gi|215482987|ref|YP_002325192.1| alanine racemase [Acinetobacter baumannii AB307-0294]
 gi|301345094|ref|ZP_07225835.1| alanine racemase [Acinetobacter baumannii AB056]
 gi|301510834|ref|ZP_07236071.1| alanine racemase [Acinetobacter baumannii AB058]
 gi|301595321|ref|ZP_07240329.1| alanine racemase [Acinetobacter baumannii AB059]
 gi|169148427|emb|CAM86293.1| alanine racemase 1, biosynthetic [Acinetobacter baumannii AYE]
 gi|213057720|gb|ACJ42622.1| alanine racemase [Acinetobacter baumannii AB0057]
 gi|213987304|gb|ACJ57603.1| alanine racemase [Acinetobacter baumannii AB307-0294]
          Length = 356

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 183 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I  
Sbjct: 243 LNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDS 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 292 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 350

Query: 365 YAK 367
             +
Sbjct: 351 PVR 353


>gi|240113626|ref|ZP_04728116.1| Alr [Neisseria gonorrhoeae MS11]
 gi|254494089|ref|ZP_05107260.1| alanine racemase [Neisseria gonorrhoeae 1291]
 gi|268599686|ref|ZP_06133853.1| alanine racemase [Neisseria gonorrhoeae MS11]
 gi|226513129|gb|EEH62474.1| alanine racemase [Neisseria gonorrhoeae 1291]
 gi|268583817|gb|EEZ48493.1| alanine racemase [Neisseria gonorrhoeae MS11]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +   +    ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGDSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|332363899|gb|EGJ41678.1| alanine racemase [Streptococcus sanguinis SK355]
          Length = 369

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSKHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      RI VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKRILVLGVSDLAALPLARKGKVSLTVASLEWLDLALAAEKDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  +T
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALT 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVDAGADVGYGATYTSESQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   P++G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGKRCPLVGRVSMDQITVRLPQAYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|324993504|gb|EGC25424.1| alanine racemase [Streptococcus sanguinis SK405]
          Length = 369

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLDWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVTPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  S  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|261400907|ref|ZP_05987032.1| alanine racemase [Neisseria lactamica ATCC 23970]
 gi|313667972|ref|YP_004048256.1| alanine racemase [Neisseria lactamica ST-640]
 gi|269209271|gb|EEZ75726.1| alanine racemase [Neisseria lactamica ATCC 23970]
 gi|313005434|emb|CBN86869.1| alanine racemase [Neisseria lactamica 020-06]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|325134740|gb|EGC57378.1| alanine racemase [Neisseria meningitidis M13399]
 gi|325144906|gb|EGC67192.1| alanine racemase [Neisseria meningitidis M01-240013]
 gi|325205630|gb|ADZ01083.1| alanine racemase [Neisseria meningitidis M04-240196]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +         
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|255067061|ref|ZP_05318916.1| alanine racemase [Neisseria sicca ATCC 29256]
 gi|255048657|gb|EET44121.1| alanine racemase [Neisseria sicca ATCC 29256]
          Length = 352

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 157/366 (42%), Gaps = 16/366 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L++N+ ++  + G  +  AV+K +AYG G  + A AL N     F V +
Sbjct: 2   RPLNARIRLDNLRHNYQTLKQIHGG-KMLAVIKADAYGHGAVRCAHALSNL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+E V+LR       I +L G+    E  I D   +                        
Sbjct: 60  VDEAVELRESGITNPIVLLEGVFEATEYAIVDKYNLWPGVGSQWQLEALIAHHWQNPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                K     +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYTSAYTALKQCKHVDSIVKFSHFACADEPDNGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP   S                 I+G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAIEG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++ D+    +G  ++++G  + +++VA A+G   Y++   +  R
Sbjct: 288 KRSRIIGRVSMDMITVEL-DASQEGLGAEVELWGDVVNINEVAEAAGMIPYEIFCNV-KR 345

Query: 365 YAKFYT 370
               Y+
Sbjct: 346 AKFTYS 351


>gi|308187068|ref|YP_003931199.1| alanine racemase 2, catabolic [Pantoea vagans C9-1]
 gi|308057578|gb|ADO09750.1| alanine racemase 2, catabolic [Pantoea vagans C9-1]
          Length = 356

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL++N   +   +  +R  +VVK NAYG G E++  AL       F + 
Sbjct: 2   SRPIVATINQQALRHNLTVVRQAAPASRVWSVVKANAYGHGIERVREALSA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    ++  + D   +                S      
Sbjct: 60  NMEEAILLREQGWKKPILLLEGFFQPEDLQLIDRYRLTTSVHSNWQIKALASASLSAPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++                  +++H A A++P   +  +Q     
Sbjct: 120 IYLKMNSGMNRLGFRPEQVSGAWQKLRALSNVGEMTLMAHFADAENPQGLIAPLQRV--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +   +        ++ V+T  
Sbjct: 177 EQAAAGLNCPRSLSNSACTLWHPEAHFDWVRPGIILYGASPSGDWQDIAGSGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AG+ V YG +   +    I V A GYADGYP                G  
Sbjct: 237 SEIIAVQQLQAGDGVGYGYRYHASTAQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G M  ++G ++MDM   D+T      +G  ++++G  +K+D VA A+GT  Y+L+ 
Sbjct: 286 VCVDGVMTQVVGAVSMDMITVDLTPCPQAGIGSSVELWGEQVKIDQVAKAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|253731093|ref|ZP_04865258.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725168|gb|EES93897.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 390

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 21  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 81  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 140

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+              +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 141 DTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 199

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDK----INKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 200 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQPKVKVHLKPSVQLIANV 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 260 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 307

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 308 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 365

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 366 CNLSRRLPRIY 376


>gi|332850737|ref|ZP_08432984.1| alanine racemase [Acinetobacter baumannii 6013150]
 gi|332866952|ref|ZP_08437278.1| alanine racemase [Acinetobacter baumannii 6013113]
 gi|332730574|gb|EGJ61890.1| alanine racemase [Acinetobacter baumannii 6013150]
 gi|332734333|gb|EGJ65460.1| alanine racemase [Acinetobacter baumannii 6013113]
          Length = 358

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 169/363 (46%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 10  IDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLE 67

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    +  + ++ G+    E  +  +     VI    Q  +  K     ++      ++
Sbjct: 68  IRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGLKVWVK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 128 LNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLHIKE 184

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               I AS  +S+ I   P  +F   RPGI LYG +   +K      ++ V+T  A II 
Sbjct: 185 TCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIA 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +    AGE V YG      +   IA+ +IGY DGYP                     I  
Sbjct: 245 LNHIKAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAY-----------VKQNFVAIDS 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D+T++  +++G  ++++G    +DDVA A+GT  Y+LL R+ +R
Sbjct: 294 KLCPVVGRVSMDMIAIDVTNT-QVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSR 352

Query: 365 YAK 367
             +
Sbjct: 353 PVR 355


>gi|332360532|gb|EGJ38342.1| alanine racemase [Streptococcus sanguinis SK1056]
          Length = 369

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 147/376 (39%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  +             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWMDLALDAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   +    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEVIHRLQAAGAVAEGIFTHFATADEVDHYKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSKSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G + PI+G+++MD     +  S  +  G  + + G      I + DVA   GT 
Sbjct: 296 --VLIDGQLCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITVTDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|258588448|pdb|3HA1|A Chain A, Alanine Racemase From Bacillus Anthracis (Ames)
 gi|258588449|pdb|3HA1|B Chain B, Alanine Racemase From Bacillus Anthracis (Ames)
          Length = 397

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVV  NAYG     +A     AG
Sbjct: 1   MEEAPFYRDTWVEVDLDAIYNNVTHIKEFIPSDVEIFAVVXGNAYGHDYVPVAKIALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +    KL 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQKEWVDEAIKLW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+   +E   F  +       +L  + +H A AD+  +   
Sbjct: 121 DGSSTMKYHINFDSGMGRIGIRERKELKGFLKSLEGAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLIS--HYKGIEASLASSSG---ILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S     G++     ++     L      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKEFGVDPKFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++   ++  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 241 FLPFKLEPALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEWIATVAIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVNGKRVPIVGRVTMDQFMIHLP--CEVPLGTKVTLIGRQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 347 ATEVAEYSGTINYEIITTISFRVPRIF 373


>gi|294101224|ref|YP_003553082.1| alanine racemase [Aminobacterium colombiense DSM 12261]
 gi|293616204|gb|ADE56358.1| alanine racemase [Aminobacterium colombiense DSM 12261]
          Length = 374

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 154/378 (40%), Gaps = 23/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              RL++DL  ++NN+ ++    G + R   VVK +AY LG +KI   L + GV  F V 
Sbjct: 4   RPTRLEVDLEKVRNNYRAIRKHVGESVRIFGVVKGDAYNLGADKIGRVLADMGVDFFAVA 63

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSH 122
           + +E + LR    ++ I VL     G  +      +   I+        S   +      
Sbjct: 64  TGDEAISLRESGIESPILVLGPSPYGIAEEYVRLGIRAAINDKGIAKALSDASVRLQKPA 123

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++D+G  R+G    EA D      +     L  I +H A +D         Q   F
Sbjct: 124 YGHVKIDSGMGRIGFFPHEAADAVEEISHLPGLNLEGIFTHFAISDARDLTYTYEQHSTF 183

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
             +I   +            +S   L  P +     RPG  + G        +S  ++ V
Sbjct: 184 VKVIGELEKRGITFSIKHCCNSGATLALPQFVMDGVRPGQLVVGMYPSKEVVRSIAIEPV 243

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
              +  I  IR   AG+ +SYG   + T D  IAV  +GY DGY   LSG          
Sbjct: 244 FEFKTAISAIRTVPAGKKLSYGLTYETTADERIAVIPVGYHDGYSRELSGK--------- 294

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
            G +  I G   PI+G+I MD  + D++   + ++GD + + G      I  D++A   G
Sbjct: 295 -GTEVLIHGKRCPIVGRICMDQALVDVSVLQNPQIGDEVVLLGKQGEETITGDEIADKIG 353

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T    L   IG R  + Y
Sbjct: 354 TIFTTLPNMIGKRVPRVY 371


>gi|268595182|ref|ZP_06129349.1| alanine racemase [Neisseria gonorrhoeae 35/02]
 gi|268548571|gb|EEZ43989.1| alanine racemase [Neisseria gonorrhoeae 35/02]
          Length = 375

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 160/370 (43%), Gaps = 19/370 (5%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            NEF+R   ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     
Sbjct: 20  RNEFMRPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADG 77

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +++EG++LR       I +L G+    E    +   +                   
Sbjct: 78  FAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWK 137

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+
Sbjct: 138 KPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQM 197

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E F       +G E SLA+S+ IL  P       R G++LYG +        ++ V+   
Sbjct: 198 EAFDLGTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGNDDRLKPVMRLS 256

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            RI   R       + YG     ++ + + + A GYADGYP                   
Sbjct: 257 TRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSP 305

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+ 
Sbjct: 306 VAVDGKLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMC 364

Query: 360 RIGTRYAKFY 369
            I  R    Y
Sbjct: 365 NI-KRAKFTY 373


>gi|331084077|ref|ZP_08333184.1| alanine racemase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330402439|gb|EGG82009.1| alanine racemase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 382

 Score =  269 bits (687), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 94/385 (24%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M     ++  I+L A+  N  +M + +  N +  AV+K + YG G   IA  +   + + 
Sbjct: 1   MRIQSRIQAHINLDAIDYNLKNMYDYMGKNTQIIAVLKADGYGHGAVPIAKEIEAYSYIW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
              V +VEEG +LR    +  I +L   +      I   +  P +  +      SK    
Sbjct: 61  GIAVATVEEGRELRKAGIKKPILILGYTYEEDYDRIVKEDFQPTVFKLSMAEQLSKAAVK 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G   +++A+            +L  I +H A AD+       
Sbjct: 121 ANKTLKIHIKLDTGMTRIGYRHIEDAIPEIVEISKLPNIELEGIFTHFARADETDLAPAY 180

Query: 177 VQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            QLE+++  +     +GI       ++S+ I+   + +F   R GI LYG          
Sbjct: 181 QQLEKYQEFLDALKRQGISIPVKHCSNSAAIIRMQDAYFDAVRAGIILYGMYPSNEVEKD 240

Query: 232 ---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +  ++ I  I++   G  +SYGG     + + +A   +GYADGY   LS    
Sbjct: 241 KILLKPAMELKSHIAYIKEVEPGVEISYGGTFTTEKVTRVATIPVGYADGYSRGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G    ILGK+ MD  M D+T+    E  D + + G D    I ++
Sbjct: 298 --------KGSVLIRGKRAKILGKVCMDQFMVDVTEIPEAEELDEVTLLGKDGTDCITME 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++   SG  NY+    I  R  + Y
Sbjct: 350 ELGELSGRFNYEFACCISKRVPRVY 374


>gi|304386876|ref|ZP_07369138.1| alanine racemase [Neisseria meningitidis ATCC 13091]
 gi|304339035|gb|EFM05127.1| alanine racemase [Neisseria meningitidis ATCC 13091]
          Length = 352

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +         
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLVRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|164688224|ref|ZP_02212252.1| hypothetical protein CLOBAR_01869 [Clostridium bartlettii DSM
           16795]
 gi|164602637|gb|EDQ96102.1| hypothetical protein CLOBAR_01869 [Clostridium bartlettii DSM
           16795]
          Length = 387

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 160/381 (41%), Gaps = 24/381 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++       +I+L  +K+N+HS+   L  + +   VVK +AYG G  ++A  L       
Sbjct: 6   LNMKRGTWAEINLNNIKHNFHSLKNTLKSDTKVCCVVKADAYGHGAVEVAKMLQQEKADY 65

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V   EE V+LR       I  +  I     +   +  +   + S       ++     
Sbjct: 66  FSVARFEEAVELRNNNIHTPILCMGYISECDIEEAINRYIGITVYSYEMAKIINQKAGKL 125

Query: 119 GVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      +++DTG +RLG    + +++            +  I +H A AD+       +
Sbjct: 126 GKKASIHIKIDTGMSRLGFLTDDNSINDILKLKELINLNIDGIYTHFATADETDKKETYL 185

Query: 178 QLERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSH 230
           QLER++ +I   +     +      +++ I+      F + R GI LYG        K  
Sbjct: 186 QLERYKKVIDVLEKANIDIQFKHVSNTAAIIDLKELGFNMVRLGIGLYGHYPSDEVSKEV 245

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  +  I  I+    G  VSYG   +    S +A  AIGYADG+  T +      
Sbjct: 246 ELKPAMKLKTIITNIKTVAPGTKVSYGYTYEFKEASTLATLAIGYADGFDRTQNNP---- 301

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVAL 348
                   K  I G +  ++G+I MD  M  I + L++ + D + I G +  +  +D+A 
Sbjct: 302 --------KVMINGILCDVVGRICMDQCMVKIPEGLNVNIEDEVLIMGAEVGVTAEDLAS 353

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 354 RRGTINYEVLCSVSRRVTRDY 374


>gi|194099058|ref|YP_002002139.1| Alr [Neisseria gonorrhoeae NCCP11945]
 gi|240014543|ref|ZP_04721456.1| Alr [Neisseria gonorrhoeae DGI18]
 gi|240016989|ref|ZP_04723529.1| Alr [Neisseria gonorrhoeae FA6140]
 gi|240081431|ref|ZP_04725974.1| Alr [Neisseria gonorrhoeae FA19]
 gi|240116062|ref|ZP_04730124.1| Alr [Neisseria gonorrhoeae PID18]
 gi|240118348|ref|ZP_04732410.1| Alr [Neisseria gonorrhoeae PID1]
 gi|240121065|ref|ZP_04734027.1| Alr [Neisseria gonorrhoeae PID24-1]
 gi|240123896|ref|ZP_04736852.1| Alr [Neisseria gonorrhoeae PID332]
 gi|240128570|ref|ZP_04741231.1| Alr [Neisseria gonorrhoeae SK-93-1035]
 gi|260440124|ref|ZP_05793940.1| Alr [Neisseria gonorrhoeae DGI2]
 gi|268601728|ref|ZP_06135895.1| alanine racemase [Neisseria gonorrhoeae PID18]
 gi|268604061|ref|ZP_06138228.1| alanine racemase [Neisseria gonorrhoeae PID1]
 gi|268682520|ref|ZP_06149382.1| alanine racemase [Neisseria gonorrhoeae PID332]
 gi|268686962|ref|ZP_06153824.1| alanine racemase [Neisseria gonorrhoeae SK-93-1035]
 gi|193934348|gb|ACF30172.1| Alr [Neisseria gonorrhoeae NCCP11945]
 gi|268585859|gb|EEZ50535.1| alanine racemase [Neisseria gonorrhoeae PID18]
 gi|268588192|gb|EEZ52868.1| alanine racemase [Neisseria gonorrhoeae PID1]
 gi|268622804|gb|EEZ55204.1| alanine racemase [Neisseria gonorrhoeae PID332]
 gi|268627246|gb|EEZ59646.1| alanine racemase [Neisseria gonorrhoeae SK-93-1035]
          Length = 352

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|302751952|gb|ADL66129.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 372

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 157/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 3   VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 62

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 63  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+P   + + Q +RF+ +++
Sbjct: 123 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGD-MTTEQYQRFKDMVN 181

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 182 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 241

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 242 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 290 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 347

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 348 CNLSRRLPRIY 358


>gi|59801649|ref|YP_208361.1| hypothetical protein NGO1295 [Neisseria gonorrhoeae FA 1090]
 gi|81311173|sp|Q5F788|ALR_NEIG1 RecName: Full=Alanine racemase
 gi|59718544|gb|AAW89949.1| putative alanine racemase [Neisseria gonorrhoeae FA 1090]
          Length = 352

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYTSAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|268611540|ref|ZP_06145267.1| alanine racemase [Ruminococcus flavefaciens FD-1]
          Length = 378

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 94/384 (24%), Positives = 158/384 (41%), Gaps = 32/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFV 62
           +    ++ L  L+ N   + +L SG+    AVVK +AYG G E I   L  + G++ F V
Sbjct: 6   KRAWAEVSLPQLRKNVEIIRSLNSGSTEIMAVVKADAYGHGDEHIVRCLANDCGIRYFAV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E + +R + PQ  I +L    P     I   N+I  + S         + +     
Sbjct: 66  SNLDEAIAVRKFAPQGEILILGYTPPEYAHEISMYNIIQGVVSTEYAEAL--VQNTPQPI 123

Query: 123 PYALQVDTGFNRLGLSLQ-----EALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNS 176
              +++DTG  R+GL         A        +K   +       +A +DDP +     
Sbjct: 124 RCHIKIDTGMGRIGLKHDTPQQCAAEIAEMMKIDKLSVEGIYTHFAVADSDDPDNVAYTD 183

Query: 177 VQLERFRTL-----ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q +              K       +S+      +    L+R GI LYG    ++   P
Sbjct: 184 KQEKFITDTYDVLAAQGIKLPHLHFMNSAATCYRNSERSTLSRAGIILYGLHPDVSLDIP 243

Query: 232 M--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              + ++  +A I  ++    G+ +SYG   +  R+  IA   IGYADGY   LS     
Sbjct: 244 EGLEPLMELKAVISHVKTVNKGDCISYGRTFRADREMRIATVTIGYADGYSRLLS----- 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G+  + G    I G++ MD  M D++D    + GD + + G +    I  DD
Sbjct: 299 ------SKGEILVHGKRCKITGRVCMDQLMIDVSDVPEAKAGDIVTLIGKEGDDRITADD 352

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT  Y+++  I  R  + Y
Sbjct: 353 LAQIYGTIGYEVVCGISKRVPRIY 376


>gi|289167441|ref|YP_003445710.1| alanine racemase [Streptococcus mitis B6]
 gi|288907008|emb|CBJ21842.1| alanine racemase [Streptococcus mitis B6]
          Length = 367

 Score =  268 bits (686), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVTVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKKILILGVSEIEAVSLAKEYDITLTVAGLEWIQALLDKEADLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREAGEAEQAQDLLQQHGAYVEGIFTHFATADEESDTYFNTQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T++   KG+      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILESMKGLPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYGLTPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++    G  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPVGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|225023462|ref|ZP_03712654.1| hypothetical protein EIKCOROL_00320 [Eikenella corrodens ATCC
           23834]
 gi|224943811|gb|EEG25020.1| hypothetical protein EIKCOROL_00320 [Eikenella corrodens ATCC
           23834]
          Length = 351

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 158/365 (43%), Gaps = 17/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   I L+ L++N+  +  L GN +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLTATIRLSHLRHNYQLLKRLHGN-KMLAVVKADAYGHGAVRCARALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR     A I +L G+    E    D   +                        
Sbjct: 60  LDEGIELRQAGVSAPIVMLEGVFEPAEYAAVDEYRLWPGVQNQWQLESLLAHRWREPVTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G   Q                  + ++H A AD+P   + + QL  F T
Sbjct: 120 WLKMDSGMHRVGFFPQNFAPAHQALRQSPQVAHIVNMTHFARADEPEQAMTTAQLAAFDT 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            ++   G + SLA+S+ I+  P       R GI+LYG          ++ V+   +RI  
Sbjct: 180 AVAGLSGAQ-SLANSAAIIAHPAARRDWGRAGIALYGIEPFPGACPELKPVMRLTSRIFA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R    GE V YG      R + I +AA GYADGYP T              G    + G
Sbjct: 239 ERTLQPGEPVGYGASFITERSTRIGIAACGYADGYPRTAQN-----------GCPLTVNG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ++G+++MDM   ++     +  G  ++++G  + +  VA ++GT +Y+LL  I  R
Sbjct: 288 QPSRLIGRVSMDMLAVELDHHQGV--GSEVELWGDAVSVATVAQSAGTISYELLCHI-KR 344

Query: 365 YAKFY 369
               Y
Sbjct: 345 AHYVY 349


>gi|317503759|ref|ZP_07961772.1| Mur ligase domain protein/alanine racemase [Prevotella salivae DSM
           15606]
 gi|315665139|gb|EFV04793.1| Mur ligase domain protein/alanine racemase [Prevotella salivae DSM
           15606]
          Length = 825

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 156/373 (41%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+  N +   + +    +   ++K +AYG G  +IA  L +  V    V   
Sbjct: 464 TTLEVNLNAVVKNLNHYRSFMKPQTKLVCMIKADAYGAGSVEIAKTLQDHRVDYLAVAVA 523

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 524 DEGVTLRKNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLDALVKEAEKEGITGFP 582

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG     +  +      ++       + SH   +D D     ++ Q E 
Sbjct: 583 VHIKLDTGMHRLGFDPHKDIDELIRRLKHQNAIIPRSVFSHFVGSDCDDFDAFSAQQFEL 642

Query: 182 F-----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F     +   +    I   + +S+GI   P+    + R G+ LYG   + NK+    +  
Sbjct: 643 FTFGASKLQSAFDHKILFHMDNSAGIEHFPDRQMDMCRLGLGLYGINPRNNKTINNIS-- 700

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ +     GE + Y  +  L RDS+I    IGYADG    LS            
Sbjct: 701 TLKTTILQLHHLATGESIGYSRKTILERDSVIGAIPIGYADGLDRHLSNRH--------- 751

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+T     + GD ++IFG  + +  ++   GT  Y+
Sbjct: 752 -GYCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDCVEIFGDHLPVTVLSDIIGTIPYE 809

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 810 VLTGISNRVKRVY 822


>gi|253575144|ref|ZP_04852483.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845600|gb|EES73609.1| alanine racemase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 391

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 106/382 (27%), Positives = 166/382 (43%), Gaps = 28/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                ++ L A+ +N       ++   R  AVVK N YG G  + A A  +AG     V 
Sbjct: 15  RETWAEVSLDAIAHNTGLFRKQIAEGCRLMAVVKANGYGHGAVQAAQAAIHAGADCLGVA 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            V+E ++LR       I VL    P G E  +     + V +        +     G + 
Sbjct: 75  LVDEALQLRAAGISQPILVLGYTPPFGVEAAVRQGITLTVDTQEVLQETIACAKKQGCAA 134

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS--LIISHLACADDPSSHVNSVQLE 180
              L+VDTG +R+GLS   A+             +    + +H A AD P       Q  
Sbjct: 135 RIHLKVDTGMSRIGLSTTRAVIELAELAAAAAPFVILEGVFTHFADADGPDPAYTLEQFA 194

Query: 181 RFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           RF+  +      G+        +S+  +  P  H  L R GI+LYG           +P+
Sbjct: 195 RFQACLDALEAHGLHVPIKHCCNSAATMRFPQMHLDLVRIGIALYGLYPSAQLRLPEYPL 254

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  +  + +I  +R+   G+ V YG   +   + LIA   IGYADG   TLS        
Sbjct: 255 QQAMQLKTKIASLRRIKPGQTVGYGRTYRAAEERLIATVPIGYADGLSRTLSNR------ 308

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-----PDIKLDDVA 347
                G   ++G+ VPI+G++ MD TM D+TD  S++ G+ + +FG       I +D+VA
Sbjct: 309 -----GFALVRGHRVPIIGRVCMDQTMLDVTDVESVQAGEEVILFGGTGEAASISIDEVA 363

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY+++ ++G R  + Y
Sbjct: 364 DWIGTINYEVVCQLGVRVPRVY 385


>gi|167722932|ref|ZP_02406168.1| alanine racemase [Burkholderia pseudomallei DM98]
          Length = 349

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 21/364 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+ +N   +   + NAR  +VVK NAYG G E + PAL  AG     +  
Sbjct: 3   RPIVARIHPDAVAHNLAIVRQKAPNARIWSVVKANAYGHGIEHVYPAL--AGADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPVLLLEGIFEAADVEIADRHRLTVAVHGDEQFKLLTAAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPHALRAAWERAAAAPSIGRIALMMHFANADEGE---IDWQMSVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +           P++  +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGASRHVADVPLRAAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    GE V YG      R+  I V A GYADGYP                G   
Sbjct: 237 RIIGVQTLTPGETVGYGRCFAAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+L+  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGEQVRVDDVAEAAGTIGYELMCA 345

Query: 361 IGTR 364
           +  R
Sbjct: 346 LARR 349


>gi|51473254|ref|YP_067011.1| alanine racemase [Rickettsia typhi str. Wilmington]
 gi|81826340|sp|Q68XW3|ALR_RICTY RecName: Full=Alanine racemase
 gi|51459566|gb|AAU03529.1| alanine racemase [Rickettsia typhi str. Wilmington]
          Length = 402

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 125/406 (30%), Positives = 187/406 (46%), Gaps = 56/406 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+L+A+KNN+  +  +   A   A VK N YG+G  +IA AL     Q FFV + EEG
Sbjct: 6   LEINLSAIKNNYRLLQDICTTALVGAAVKANGYGIGAMQIAKALIEENCQYFFVATSEEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYAL 126
           + LR        I VL G+       +   NL PV++++ Q+  + K  +      P  L
Sbjct: 66  INLRKALNNDITILVLNGVFTHDALELIQYNLTPVLNNLKQIEIWQKFSNLKEKILPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NR GL+  E     ++    K   L  IISHLA +++  +  N  QL RF+  +
Sbjct: 126 HFNTGLNRFGLNYDEIEQLINDRDLLKGLDLQYIISHLAASEEMDNPYNLAQLNRFKDYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---------------------- 224
            ++  ++ASLA+S GI LG +YHF L RPG +LYG                         
Sbjct: 186 EYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNSLIEVSYNLSYKEKFERNTPALA 245

Query: 225 -------------------KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD 265
                               +  S+ +Q  VT +A II ++       + Y       RD
Sbjct: 246 TTVCINKCADVNTRLTYKVPLKGSYRLQNPVTLKAPIIHLQNLTLDSHIGYNMTFTTKRD 305

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           S+IA   +GYADG+    S             G+ FI    VPI+G+++MD+   D+TD 
Sbjct: 306 SIIATLPLGYADGFSRNFSNQ-----------GEVFINSRSVPIVGRVSMDLINIDVTDL 354

Query: 326 LSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              EV  G  ++I G     D +A   GT  Y++L  +G+RY + Y
Sbjct: 355 PPSEVFLGQEVEIIGNYCTPDKIASIIGTVGYEVLTSLGSRYKRKY 400


>gi|325661284|ref|ZP_08149911.1| alanine racemase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|331084962|ref|ZP_08334049.1| alanine racemase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|325472791|gb|EGC76002.1| alanine racemase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|330408662|gb|EGG88127.1| alanine racemase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 388

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 163/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M +   +  KIDL A+  N   M   L       AV+K + YG G  ++A  L +   V 
Sbjct: 1   MKTYSRVYAKIDLDAVAWNMEQMKKNLKEGTEMVAVIKTDGYGHGAVQVASMLESYDYVW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMS 117
            + V +++E V LR    Q  I VL  I P Q   +    +   + +        +  + 
Sbjct: 61  GYAVATLDEAVVLRAAEIQKPILVLGCIFPDQYWEMLKYEIRMNVYTKEMAEAISALAVE 120

Query: 118 CGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      +++DTG  RLG S  + +++            L  + +H A AD+       
Sbjct: 121 KGEQAYVHIKLDTGMARLGFSAEESSIEEIKEIAELPNLVLEGVFTHFAKADEEDKTFTM 180

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH- 230
           +QLE+F  +                ++S+GI+      + L R GI++YG          
Sbjct: 181 MQLEKFEWMTQRLEEEGVTFPYVHASNSAGIIDVRRADYNLVRAGIAIYGLYPSEEVDKE 240

Query: 231 --PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  ++ ++ I  ++   AG  VSYGG         IA   IGY DGYP +LS    
Sbjct: 241 KVQLKPALSLKSHIAFVKDIPAGTPVSYGGDFVSEHQMRIATIPIGYGDGYPRSLSDT-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G   PI+G+I MD  M D++D   ++ GD + + G D    + ++
Sbjct: 299 ---------GYVLIRGKKAPIIGRICMDQFMVDVSDIPEVKFGDKVTLIGRDQEEYLPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + Y
Sbjct: 350 KLSELSGRFNYEFVCDLGKRIPRVY 374


>gi|291166386|gb|EFE28432.1| alanine racemase [Filifactor alocis ATCC 35896]
          Length = 388

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 87/383 (22%), Positives = 159/383 (41%), Gaps = 25/383 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M        +I+L  L+ N+ ++  L +   +   V+K NAYG G  +IA    N G+  
Sbjct: 1   MRQYGATWAEINLDTLEQNYKNLKQLITHKTKVCCVLKANAYGHGSVEIAKLYENMGIDY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V++++E ++LR    +  I  L  +   Q + +   N+   I ++ Q    + +    
Sbjct: 61  IAVSNMDEALELRNAGIKLPITCLSFVPEYQYEELLKNNIDIPIYTLSQGIALNNIALKH 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  +++D+G +R+G    + A+                I +H A AD+        
Sbjct: 121 QKVANVHIKIDSGMSRIGFLCNDMAIRDIKQLSRLDGLHFKGIFTHFARADERDKFHTQK 180

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKS 229
           Q   F  LI   +            +++  +  P YH  + R GI+L+G         K+
Sbjct: 181 QFYVFSKLIQSLEKQNITFDIRHCCNTAATICYPEYHLDMVRLGIALFGYYPSKEVSEKN 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDS 288
             ++  ++  + I  ++    G  VSYG +  +  D   IA   IGYADG+   LS    
Sbjct: 241 VNIKPAMSLFSTISNLKVVEKGTGVSYGHKYIVQDDYEKIATIPIGYADGFSRALSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--KLDDV 346
                        IKG   PI+G + MD +M  +  S    +GD + I+  +    ++ +
Sbjct: 298 --------NCYVKIKGDKYPIVGNVCMDQSMIRLDISKEFNIGDKVVIYSDEQDMSVERL 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A GT +Y++L  +  R  + +
Sbjct: 350 AKAMGTISYEVLCMMQRRIPRIF 372


>gi|297582852|ref|YP_003698632.1| alanine racemase [Bacillus selenitireducens MLS10]
 gi|297141309|gb|ADH98066.1| alanine racemase [Bacillus selenitireducens MLS10]
          Length = 405

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 92/385 (23%), Positives = 157/385 (40%), Gaps = 34/385 (8%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           ++ F R    +IDL A+ +N  ++  +L  +    AVVK NAYG G   +A    +AG  
Sbjct: 19  THPFYRDTWAEIDLNAIHDNVTAIKASLPAHTEMMAVVKANAYGHGAVDVAREALDAGAT 78

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
              V  ++E + LR     A I VL  I      I  + ++   +     L     L+  
Sbjct: 79  YLGVAILDEAIALRKAGIGAPILVLGYIRAEDILIASELDIAVTVFQKDWLEKAESLLRA 138

Query: 118 CGVSHPYALQVDTGFNRLG-LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      +++D+G  R+G    +E  +            +    +H+A AD+P +    
Sbjct: 139 AGRKAVCHVKLDSGMGRIGLRKEEEIRELAEVLKASLHIHVEGAYTHMAAADEPGNDYYH 198

Query: 177 VQLERFRTLISHYKG------IEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----I 226
           VQ ERF  ++   +            A+S+  L        L R GIS+YG         
Sbjct: 199 VQKERFLDMMDWLESSLGEKVKIRHCANSASALRFHEESCNLVRVGISMYGMAPSVEMKP 258

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           +   P++  ++ ++RI  ++    GE +SYG   + +    I    IGYADG+       
Sbjct: 259 DMKVPLKQAMSLKSRITQVKLLEPGEGISYGSTYRTSGHEWIGTVPIGYADGWIRAHQS- 317

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                      G   +KG    I+G+I MD  M  +     +E G  + + G D    + 
Sbjct: 318 -----------GDVLVKGKRAKIVGRICMDQMMILL--DGPVETGTEVTLIGEDGGSFLS 364

Query: 343 LDDVALASGTTNYDLLVRIGTRYAK 367
           +D+VA    T +Y++   +  R  +
Sbjct: 365 MDEVAGRIDTISYEIPCTLSYRVPR 389


>gi|300691641|ref|YP_003752636.1| alanine racemase 2, PLP-binding [Ralstonia solanacearum PSI07]
 gi|299078701|emb|CBJ51360.1| alanine racemase 2, PLP-binding [Ralstonia solanacearum PSI07]
          Length = 375

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 153/367 (41%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + ++R  AVVK NAYG G E+    L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQVARRHAPDSRVWAVVKANAYGHGIERAYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    ++    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLALVEQYRLATTVHCEEQLRMLELARLKG-PVS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL++S+  L  P  H    RPG+ LYG +        +   +   +T +
Sbjct: 178 RATQGLPG-EASLSNSAATLWHPRAHRDWVRPGVILYGASPTGVAADIEGTGLMPAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG + ++ +   I V A GYADGYP    G    H         
Sbjct: 237 SELIAIQDLPPGATIGYGSRFQVEQPMRIGVIACGYADGYPRHAPGWGGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+       VG  + ++G  + +D+VA A+GT  Y+L+ 
Sbjct: 290 VLVGGVRTRMVGRVSMDMITVDLAGVPDARVGTPVTLWGQGLPIDEVAHAAGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|330684788|gb|EGG96481.1| alanine racemase [Staphylococcus epidermidis VCU121]
          Length = 382

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 99/382 (25%), Positives = 168/382 (43%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R   L IDL A+ +N+ + + L  N    +V+K N YGLG  +IA  L   G   
Sbjct: 2   SEKFYRSTYLNIDLNAILSNYQTFDKLHANQTVISVIKANGYGLGSVRIAQHLMENGASF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMS 117
           F V +++E ++LR++  +A+I +L  I P          +       S  + +  +    
Sbjct: 62  FAVATLDEAIELRMHGIKAKILILGVIPPKDINKAIQHRVALTVPSKSWLKESIKNISDE 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    L++DTG  RLG+  ++E  +               + +H ACAD+P   + +
Sbjct: 122 NEKALWLHLKLDTGMGRLGMKDVEEYKEVVDIISKYDQLVFEGVYTHFACADEPGDSM-A 180

Query: 177 VQLERFRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
            Q ++F+ L+   +        +S+G LL         R GISLYG         N    
Sbjct: 181 TQYQKFKELVEQVEKPTYIHTQNSAGALLMDGQFCNAIRLGISLYGYYPSEYVKENVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      + I+  +    G+ VSYG     T  + IAV  IGYADGY  ++ G      
Sbjct: 241 LKPSAQLVSEIVQTKTLNVGDSVSYGSTYTATEPTRIAVLPIGYADGYLRSMQGSC---- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                     + G+   ++G++ MD TM  I D  +++VGD + +       D  ++ +A
Sbjct: 297 --------VNVNGHQCEVIGRVCMDQTMVKIPD--TVKVGDKVILLDNHVDTDQSVEALA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +  R  + Y
Sbjct: 347 KQQDTINYEVLCNLSRRLPRIY 368


>gi|325568405|ref|ZP_08144772.1| alanine racemase [Enterococcus casseliflavus ATCC 12755]
 gi|325158174|gb|EGC70327.1| alanine racemase [Enterococcus casseliflavus ATCC 12755]
          Length = 386

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 148/380 (38%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ ID TA+  N    +  L       AVVK N YG G  + A A    G   F V
Sbjct: 19  HRPTKVIIDTTAITENIKNEIAHLPSETFLFAVVKANGYGHGAVQTAQAAKEGGAAGFCV 78

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
            +++E ++LR       + +L  ++     ++ + +    ++S+  L      +      
Sbjct: 79  ATIDEAIELREAGITDPLLILGVVNVQDIPLLAEYDFSFPVASMDWLVEAGTYLEENPIK 138

Query: 121 -SHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 ++VDTG  R+G  + +E L                I +H + AD   +     Q
Sbjct: 139 TPLKVHVKVDTGMGRIGFLTPEEVLQAVLWLETHPTFDWEGIFTHFSTADQADTTYWETQ 198

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            +RF+ +++    +   +   +S+  L        + R GI++YG       + +   ++
Sbjct: 199 HQRFKEVLTVLPYLPTYIHTGNSATSLWHKEAVGNMVRFGIAMYGLNPSGHALKEPFSLK 258

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + +I ++    G  + YG          I    IGYADG+   + G        
Sbjct: 259 PALSLVSELIQVKLLEKGAGIGYGETYITPHQEWIGTVPIGYADGWLRKMQGFSL----- 313

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                   ++G    I+G++ MD  M  +  +    VG  + + G +    I + DVA  
Sbjct: 314 -------LVEGEPCEIVGRVCMDQLMIRLPRAF--AVGTTVTLIGENHGKRITMQDVADQ 364

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y++   +  R  + Y
Sbjct: 365 LETIHYEVACTLSARVPREY 384


>gi|54022846|ref|YP_117088.1| alanine racemase [Nocardia farcinica IFM 10152]
 gi|54014354|dbj|BAD55724.1| putative alanine racemase [Nocardia farcinica IFM 10152]
          Length = 381

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 158/377 (41%), Gaps = 25/377 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +   +DL A+ +N   +   +G+A    VVK + Y  G  ++A     AG ++  VT+V 
Sbjct: 11  VEAVVDLDAIAHNVRVLREYAGDAAMMVVVKADGYNHGAVEVARTALAAGARELGVTTVA 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E ++LR     A +                 ++   +S   Q     +   + G +    
Sbjct: 71  EALRLREAGITAPVLCWLNTLSADYAAAVAADIEIGVSGTEQLRAVATAARATGRTATVT 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           L+VDTG NR G++  E              +      + SHLA AD+P       Q +RF
Sbjct: 131 LKVDTGLNRNGIAADELPTVLDLLGELVEEKTVRLRAMFSHLAHADEPKHPFLDEQRDRF 190

Query: 183 -----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
                       +     LA+S+  +  P+  F + RPGI++YG +         ++  +
Sbjct: 191 TAAAAAATARGLRPELLHLANSAATVTRPDLAFDMVRPGIAVYGLSPVPELGDFGLRPAM 250

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A++ L+++   GE VSYG Q    RD+ +A+   GYADG    LSG           
Sbjct: 251 TFQAQVALVKRVAEGEGVSYGHQWIAPRDTTVALIPAGYADGVFRPLSGRFD-------- 302

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPDIKL---DDVALASGT 352
               ++ G   P +G++ MD  + D+ D    +  GD   +FG    +    + A   GT
Sbjct: 303 ---VWLGGTRRPNVGRVCMDQFVVDLGDDAAGVAAGDTAVLFGGGPGVPGAQEWADLLGT 359

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y+++     R  + Y
Sbjct: 360 IHYEVVCSPRGRAVRRY 376


>gi|226952672|ref|ZP_03823136.1| alanine racemase 1 [Acinetobacter sp. ATCC 27244]
 gi|226836578|gb|EEH68961.1| alanine racemase 1 [Acinetobacter sp. ATCC 27244]
          Length = 356

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 100/364 (27%), Positives = 168/364 (46%), Gaps = 23/364 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID TAL+ N + +  L+ N++  ++VK NAYG G +    AL       F V  +EE ++
Sbjct: 8   IDSTALQYNLNRVKQLAPNSKIVSMVKANAYGHGIKDCLTALAA--TDAFGVACLEEALE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFY--SKLMSCGVSHPYALQ 127
           +R       I ++ G+    E I   +  L  V+    Q+ +    K     +     ++
Sbjct: 66  IRRLGYLQPITLIEGVFSADEMIHVIEQKLECVVHHAQQVEWLLAHKDQYQALDLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E          +    +  +    A  D     +N  Q  +F  +  
Sbjct: 126 LNSGMNRLGFKVSEITTVIQRLKAEGFNCVLTMHFANADTD---HPLNEQQKMQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIIL 244
             + I AS  +S+ I   P  HF   RPGI LYG +   +K+     ++ V+T  A II 
Sbjct: 183 ACEPILASCCNSAAIYRYPELHFDFVRPGIMLYGASPFADKNVEALDLKPVMTFSAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           + +   GE V YG     T+D  IA+ +IGY DGYP                     I  
Sbjct: 243 LNQIQQGEYVGYGSTYVATQDMTIAIVSIGYGDGYPRAY-----------IKPNFVAIYD 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            ++P++G+++MDM   DI++  + ++G  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLIPVIGRVSMDMIAIDISNL-NAKIGTKVELWGNTRLVDDVAEANGTIGYELLCRLSQR 350

Query: 365 YAKF 368
             + 
Sbjct: 351 PQRR 354


>gi|311279308|ref|YP_003941539.1| alanine racemase [Enterobacter cloacae SCF1]
 gi|308748503|gb|ADO48255.1| alanine racemase [Enterobacter cloacae SCF1]
          Length = 356

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 91/367 (24%), Positives = 155/367 (42%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   +DL AL++N   +   +  +R  +VVK NAYG G ++I  AL       F + 
Sbjct: 2   SRPVVASLDLQALRHNLSVVRRAAPGSRVWSVVKANAYGHGIDRIWSALKE--TDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  + +L G    ++  +FD   +             +         
Sbjct: 60  NLEEAILLRERGWKGPVLMLEGFFQAEDLALFDKYRLTTTVHSNWQIKALQNARLHAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG + Q                   ++SH A A+         +     
Sbjct: 120 VYVKVNSGMNRLGFTPQRLHTAWQQLRALPNVGDMTLMSHFADAE---KPDGIREAMVQI 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +   G   SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLGCPRSLSNSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANSGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+    G+ V YG   + T++  I + A GYADGYP                   
Sbjct: 237 SEIIGIQNLKPGDTVGYGRLYRATQEQRIGIVACGYADGYPRIA-----------PDNTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA   GT  Y+L+ 
Sbjct: 286 VLVDGVRTGTVGRVSMDMLAVDLTPCPQAGIGTPVELWGNEIKIDDVASCCGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|329850902|ref|ZP_08265747.1| alanine racemase [Asticcacaulis biprosthecum C19]
 gi|328841217|gb|EGF90788.1| alanine racemase [Asticcacaulis biprosthecum C19]
          Length = 350

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 130/371 (35%), Positives = 185/371 (49%), Gaps = 22/371 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++   RL +DL AL  N+ S+   +G A  A VVK +AYGLG   +A  L   G + F
Sbjct: 1   MSASSTARLNVDLAALSQNYASLKRAAGAAEVAPVVKADAYGLGMAGVAAHLARQGAKTF 60

Query: 61  FVTSVEEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           FV  + EG+ LR        I+VL G+            L PVI++  Q   +   +   
Sbjct: 61  FVARLAEGLALRTLVGNDPVIYVLDGLT--DPSAFAAQRLRPVINTPDQYQLW---LQGP 115

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                AL +DTG NRLG+   +  D        +   L+L++SHLAC D+P   +N  QL
Sbjct: 116 SEVVAALHIDTGMNRLGVRPDQIADL----PAARHHGLALVMSHLACGDEPGHPMNYQQL 171

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             FR    H+ G+  SL++SSG+ LGP+Y F L RPGI LYGG         +Q V    
Sbjct: 172 MAFRAATDHFPGVARSLSNSSGLYLGPDYGFDLVRPGICLYGGGPFGTAHADIQPVAHLS 231

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ARI+ IR+   GE V YG      RD  +A   +GYADG   +L              G 
Sbjct: 232 ARILQIRELKVGESVGYGASFVADRDMTLATIGLGYADGLMRSL-----------APLGF 280

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G   P+ G+++MD+   D+T    +    +++I G    LD VA A+GT  Y++L 
Sbjct: 281 VTVQGERRPLTGRVSMDVFTVDVTGLH-VSDRTWVEILGSSQNLDAVATAAGTIGYEVLT 339

Query: 360 RIGTRYAKFYT 370
           R+GTR  + YT
Sbjct: 340 RLGTRVPRHYT 350


>gi|324990138|gb|EGC22076.1| alanine racemase [Streptococcus sanguinis SK353]
          Length = 369

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIDFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLDPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  S  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|308234426|ref|ZP_07665163.1| alanine racemase [Atopobium vaginae DSM 15829]
 gi|328944273|ref|ZP_08241737.1| alanine racemase [Atopobium vaginae DSM 15829]
 gi|327491192|gb|EGF22967.1| alanine racemase [Atopobium vaginae DSM 15829]
          Length = 385

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 100/389 (25%), Positives = 162/389 (41%), Gaps = 33/389 (8%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            N +  ++I+L+AL+ N  +   L + + R   VVK +AYG G    A A+ +AG   F 
Sbjct: 7   KNRWSWVEINLSALRRNVRTFKKLLNPSVRLVCVVKADAYGHGAAACARAMSSAGANQFA 66

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGV 120
           V +V+EG+ LR       I +L          + + +LIP I  +   L +  + ++   
Sbjct: 67  VATVDEGIALRKSGITQPIVLLSEPPETAIDDLIEYSLIPTIYTTEFVLAYGERCVAHNT 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
              Y + +DTG  R+G++  +A++F H     +        +H A AD         Q +
Sbjct: 127 VGKYHMALDTGMTRVGVAASDAVEFRHTIDFHRGISCIGTSTHFATADIEGDWDFRRQYQ 186

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQ 233
            F   I                S++  +L P   F + R GI LYG            + 
Sbjct: 187 VFSDAIRELHAAGFYTGLIHCNSTAATILHPELQFDMCRVGIGLYGLHPSEATVSRLELS 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSP 292
            V++ +AR++   +   G+ VSYG   +++     IA   +GYADG   +LS        
Sbjct: 247 PVMSVKARVVRAVEPRIGDGVSYGMTYRVSDPHLQIATIPLGYADGLSRSLSNKMD---- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDIT--------DSLSIEVGDYIQIFGPD---- 340
                    +KG  V  +G+I MD  MF               IE GD + + G D    
Sbjct: 303 -------VLVKGQRVHQVGRICMDQCMFAYPLQTLAHPQGFAPIERGDVVTVLGEDGAEY 355

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           I  D++A    T NY++L     R  + Y
Sbjct: 356 ISADELAALRNTINYEVLCDFSLRLERIY 384


>gi|212710753|ref|ZP_03318881.1| hypothetical protein PROVALCAL_01821 [Providencia alcalifaciens DSM
           30120]
 gi|212686450|gb|EEB45978.1| hypothetical protein PROVALCAL_01821 [Providencia alcalifaciens DSM
           30120]
          Length = 354

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  I    L++N   +    G A+  +V+K + YG G ++I   L  +    F V  
Sbjct: 3   RPIRAIIHPHNLEHNLAVIRQKIGQAKIWSVMKADGYGHGIKRIWRGLKAS--DGFAVLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR    Q  I +L G     + ++ D   +             +  +       
Sbjct: 61  LHEAVLLREEGWQGPILLLEGFFQAADLVVIDQYQLTTSVHSRWQLAAIEQATLSQPISV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +++++G NRLG S+ E  D      +        ++SH A +D P       Q+   + 
Sbjct: 121 YIKLNSGMNRLGFSVSEYSDIVDQLTHMANVANVTLMSHFANSDLPGGT----QVPLEKI 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
                  +   +A+S  +L   N H+   R GI LYG +          + ++  +T ++
Sbjct: 177 QHFSSLSLPTCIANSGAVLWHQNTHYDWVRAGIVLYGASPSGKWADIAEYHLKAAMTLQS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I    AG+ + YG +    +   IA  A GYADGYP                G   
Sbjct: 237 EIIAIHHIEAGQSIGYGSKFTSEKPMRIATVACGYADGYPRHA-----------PTGTPV 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           + +G    +LG ++MDM   DI+D   + +G  ++++G ++ +DDVA  +GT  Y+LL  
Sbjct: 286 WCQGRRCELLGAVSMDMLTIDISDCPEVTIGTPVELWGENLPVDDVAQFAGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|239999360|ref|ZP_04719284.1| Alr [Neisseria gonorrhoeae 35/02]
 gi|317164616|gb|ADV08157.1| hypothetical protein NGTW08_1189 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 352

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGNDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+I+MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRISMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|225010284|ref|ZP_03700756.1| alanine racemase [Flavobacteria bacterium MS024-3C]
 gi|225005763|gb|EEG43713.1| alanine racemase [Flavobacteria bacterium MS024-3C]
          Length = 363

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 106/367 (28%), Positives = 159/367 (43%), Gaps = 19/367 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL AL +N+  M   +S       VVK N YG     IA  L + GV    V    E
Sbjct: 6   LEIDLAALAHNYRYMRSKISAETMLLGVVKANGYGSESIAIAQKLTDLGVNYLGVAYTHE 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV LRL   +  I VL+   P +   I +  L P I S+  L  + ++      +P  L+
Sbjct: 66  GVALRLAGIKTPILVLHP-QPEEFHDIVNHCLEPSIYSIRTLEAFIQVAPLNSHYPIHLK 124

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTLI 186
           ++TG NRLGLS             +   ++  ++SHLA  DD        +Q++RF+  +
Sbjct: 125 LNTGLNRLGLSTGTLERVCKTLLCQSNVKVKAVLSHLAATDDLKERAFTELQIQRFKDGV 184

Query: 187 SHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           +  +          L +SSGI+  P   F + R GI+LYG  +       ++ V T   +
Sbjct: 185 AFIEKHIGPVAIKHLINSSGIINFPEAAFNMVRSGIALYGYGNNPKIDALLKPVATLTTK 244

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  I     G+ V Y       +   +A   IG+ADG                   G  F
Sbjct: 245 ISQIHSIEKGDWVGYNKGFVANKKMRVATLTIGHADGISRVYG----------QGKGVVF 294

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G   PI+G + MDM M D+ + +    GD + IFG     +  A  + T +Y+LL  I
Sbjct: 295 VGGKPCPIIGNVCMDMLMIDLENQI-ANEGDSVVIFGKGASAETFAGGAKTISYELLTGI 353

Query: 362 GTRYAKF 368
           G R  + 
Sbjct: 354 GARVKRV 360


>gi|308389771|gb|ADO32091.1| alanine racemase [Neisseria meningitidis alpha710]
 gi|325131163|gb|EGC53883.1| alanine racemase [Neisseria meningitidis OX99.30304]
 gi|325136699|gb|EGC59299.1| alanine racemase [Neisseria meningitidis M0579]
 gi|325201690|gb|ADY97144.1| alanine racemase [Neisseria meningitidis M01-240149]
 gi|325208574|gb|ADZ04026.1| alanine racemase [Neisseria meningitidis NZ-05/33]
          Length = 352

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGITEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|325128679|gb|EGC51545.1| alanine racemase [Neisseria meningitidis N1568]
          Length = 352

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +         
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLVRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|325204612|gb|ADZ00066.1| alanine racemase [Neisseria meningitidis M01-240355]
          Length = 352

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWSAVGNQWQLEALLARHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|333031463|ref|ZP_08459524.1| Alanine racemase [Bacteroides coprosuis DSM 18011]
 gi|332742060|gb|EGJ72542.1| Alanine racemase [Bacteroides coprosuis DSM 18011]
          Length = 833

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 152/370 (41%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL AL +N +     L    +   ++K  AYG G  ++A  L +  V    V   +E
Sbjct: 475 LEVDLNALIDNLNYYRDQLQPKTKIMCMIKAAAYGAGSYEVAKTLQDRKVDYLGVAVADE 534

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     + I ++        K +F  +L P + S   L             + P  
Sbjct: 535 GAELRKVGITSSIIIMNPEVSA-FKQMFQYSLEPEVYSFHLLDSLLNAAEKEGITNFPIH 593

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG    +  +  +   N+       I SHL  +D D        Q+  F  
Sbjct: 594 IKIDTGMHRLGFMADDMPELVNRLKNQNALIPKSIFSHLVGSDSDVFDDFTKDQISLFDK 653

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +S+GI   P  H+ + R GI LYG               T +
Sbjct: 654 AATELQAAFSHKIIRHICNSAGIERFPEAHYDMVRLGIGLYGVHPSNKPILKNVN--TLK 711

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I+     E V Y  +  LTR+S IA   IGYADG    L              G 
Sbjct: 712 TTILQIKDLDKIETVGYSRKGVLTRNSRIAAIPIGYADGLNRKLGN----------HNGF 761

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD++M D+TD    + GD + I+G D+  + +A   GT  Y++L 
Sbjct: 762 CLVNGQKASYIGNICMDVSMIDVTDIP-CKEGDEVIIYGNDLPAEVLAEKLGTIPYEILA 820

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 821 NISTRVKRVY 830


>gi|111220586|ref|YP_711380.1| alanine racemase [Frankia alni ACN14a]
 gi|111148118|emb|CAJ59786.1| Alanine racemase [Frankia alni ACN14a]
          Length = 387

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 96/384 (25%), Positives = 157/384 (40%), Gaps = 29/384 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S       ++L A++++  ++ A +G+A T AVVK + YG G    A A  +AG      
Sbjct: 15  SEPRTYAAVELDAVRDSVAALAARAGDAATMAVVKADGYGHGMIPCARAALDAGASWLGT 74

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVS 121
             +EE + LR     A +         +        +    S S       +     G  
Sbjct: 75  AVLEEALALRAAGITAPVLCWLATPGERFGEAISAGIDVSASASWTLTEIAAAARLAGRP 134

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQ 178
               L+ DTG  R G    +       +   +   +     + SH A AD P       Q
Sbjct: 135 ARVHLKADTGLGRAGAMPGDWPGLCDQAAALQAEGVIEAFGVWSHFAFADAPGHATVQAQ 194

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
           +  FR  +     +        LA+S+  L+ P  HF L RPG+S+YG +       P +
Sbjct: 195 IGAFRDAVDIAEKAGLAPTVRHLANSAATLVSPEAHFDLVRPGVSVYGLSPGPEVGPPAR 254

Query: 234 T----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 ++  +   L+++  AG  VSY  +    R++ +A+  +GYADG P   +     
Sbjct: 255 FGLRPAMSLVSHAALVKRVPAGTGVSYAHRYTTARETTLALVPLGYADGIPRAATNT--- 311

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G+    G    I G + MD  + D+ D   +  GD +++FGP    +   DD
Sbjct: 312 --------GEVLFGGRRRRIAGTVCMDQFVLDVGDD-EVAAGDEVRLFGPGDLGEPTADD 362

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A+A GT NY+++ RIG R  + Y
Sbjct: 363 WAVALGTINYEIVTRIGQRVPRVY 386


>gi|254805407|ref|YP_003083628.1| Alanine racemase [Neisseria meningitidis alpha14]
 gi|254668949|emb|CBA07214.1| Alanine racemase [Neisseria meningitidis alpha14]
          Length = 352

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +         
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLVRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRHA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|253733096|ref|ZP_04867261.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253728929|gb|EES97658.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 390

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 21  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 81  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 140

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 141 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 199

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 200 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 260 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 307

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          +D VA    T NY++L
Sbjct: 308 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVDVVAEKQHTINYEVL 365

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 366 CNLSRRLPRIY 376


>gi|68536824|ref|YP_251529.1| hypothetical protein jk1734 [Corynebacterium jeikeium K411]
 gi|260579183|ref|ZP_05847073.1| D-alanine racemase [Corynebacterium jeikeium ATCC 43734]
 gi|68264423|emb|CAI37911.1| alr [Corynebacterium jeikeium K411]
 gi|258602669|gb|EEW15956.1| D-alanine racemase [Corynebacterium jeikeium ATCC 43734]
          Length = 572

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/401 (26%), Positives = 170/401 (42%), Gaps = 44/401 (10%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M       L +DL A+ +N       +  A   AVVK +AY  G + +APA+ +AGV+  
Sbjct: 3   MSDRHLAELVVDLDAIAHNVRVFREAAAPAGVLAVVKADAYNHGVDVVAPAMLDAGVEQL 62

Query: 61  FVTSVEEGVKLR-------LYTPQARIFVLYGIHPGQEKIIFDTNLI-------PVISSV 106
            V ++ E + LR            A I             +F  ++           S V
Sbjct: 63  GVATLGEALHLREILAGLGESYASAPITAWMWTPGEDLAEVFAADINVGVPSLAHARSLV 122

Query: 107 PQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLA 165
            Q     +           L VDTG +R G+S  E  +      +K  L +++ +++H+A
Sbjct: 123 DQAEKTQREAQVSAPVRVTLMVDTGLSRSGVSPAEWRETVELLASKTELVEVTAVMTHMA 182

Query: 166 CADDPSSHVNSVQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLY 220
            ADDP S  N++Q  RF   I   +          +A++   L  P+  +QL RPG+ LY
Sbjct: 183 SADDPKSEANNLQAARFAEAIEFCRSRGLRVPCNHIANTPATLHRPDLAYQLVRPGVGLY 242

Query: 221 GGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP 280
           G    I     ++  +T  AR+   R    GE VSY    +  RD+  AV A+GYADG P
Sbjct: 243 GIDP-IGVDVELRAAMTLRARVTTTRVVPKGEGVSYSHTWRAQRDTRTAVVALGYADGLP 301

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL----------SIEV 330
            ++SG             +  I G   P +G++ MD  + ++  +            ++ 
Sbjct: 302 RSVSG-----------KMQVTINGKTYPQIGRVCMDQIVVELGPADGAEGSTNGAADVKP 350

Query: 331 GDYIQIFGP-DIKLDDVALASGTTNYDLLVRI-GTRYAKFY 369
           GD+  IFG      D+ A  +GT +Y++L    G R  + +
Sbjct: 351 GDWAVIFGEGGNSADEFAELAGTISYEVLTMPRGPRVKRVF 391


>gi|161521048|ref|YP_001584475.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|189352774|ref|YP_001948401.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|160345098|gb|ABX18183.1| alanine racemase [Burkholderia multivorans ATCC 17616]
 gi|189336796|dbj|BAG45865.1| alanine racemase [Burkholderia multivorans ATCC 17616]
          Length = 373

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + + + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELVERHQLTVAVHCDEQLDLLIAAKPQQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QL +F  
Sbjct: 121 QLKMNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADEGE---IDWQLAQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E +L++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++   AGE V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAAGETVGYGRRFTAERPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVLTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDRVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|332652709|ref|ZP_08418454.1| alanine racemase [Ruminococcaceae bacterium D16]
 gi|332517855|gb|EGJ47458.1| alanine racemase [Ruminococcaceae bacterium D16]
          Length = 373

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 109/378 (28%), Positives = 164/378 (43%), Gaps = 30/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                ++DL AL +N   +  AL+   R  +VVK +AYG G   +A  L   GV+ F V 
Sbjct: 6   SRAWREVDLNALAHNARVLQGALAPGCRLMSVVKADAYGHGSIPVARRLEAEGVKAFAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EEG+ LR    Q +I +L    PG    I    L+  ++        +   + GV   
Sbjct: 66  CLEEGIALRRSGIQGKILILGYTSPGMAFQICRWKLVQTVADEGHGRALA---AQGVPLS 122

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS---HVNSVQLE 180
             L +DTG +RLG+ +++        +      +    SHL  +D   +        QLE
Sbjct: 123 VHLALDTGMHRLGIPVEDHE-AISRLYKLPNLNIQGTFSHLCVSDSLEAKDVSFTHTQLE 181

Query: 181 RF-----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG---GTDKINKSHPM 232
           +F               E  + +S GI   P       R GI+LYG         +   +
Sbjct: 182 QFYGAVRWLKTHGMNPGEIHIQASYGIWNLPPQPCFWARAGIALYGIFSNDAHTERKLDL 241

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             V++  AR+ L+R  L GE   YG   +  +   +AV  IGYADG P +LS        
Sbjct: 242 HPVLSLRARVALVRTMLPGEGAGYGLAFRTDQMRRLAVVTIGYADGLPRSLS-------- 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
               GG+  + G   P++G++ MD  M D+TD   ++ GD   I G D    I+ +DVA 
Sbjct: 294 --QQGGEVLLHGTRCPMVGRMCMDQLMVDVTDVPCVKPGDVATIIGTDGGEVIRAEDVAG 351

Query: 349 ASGTTNYDLLVRIGTRYA 366
             GT   +LL R+G R  
Sbjct: 352 QCGTITNELLSRLGQRLP 369


>gi|308198664|pdb|3OO2|A Chain A, 2.37 Angstrom Resolution Crystal Structure Of An Alanine
           Racemase (Alr) From Staphylococcus Aureus Subsp. Aureus
           Col
 gi|308198665|pdb|3OO2|B Chain B, 2.37 Angstrom Resolution Crystal Structure Of An Alanine
           Racemase (Alr) From Staphylococcus Aureus Subsp. Aureus
           Col
          Length = 385

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 16  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 75

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 76  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 136 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 194

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 195 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 254

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 255 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 302

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 303 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 360

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 361 CNLSRRLPRIY 371


>gi|207723325|ref|YP_002253724.1| alanine racemase protein [Ralstonia solanacearum MolK2]
 gi|206588523|emb|CAQ35486.1| alanine racemase protein [Ralstonia solanacearum MolK2]
          Length = 375

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + ++R  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQVARRHAPDSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    ++    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLALVEQYRLTTTVHCEEQLRMLELARLKG-PVS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL++S+  L  P  H    RPG+ LYG +        +   + + +T +
Sbjct: 178 QATQGLPG-EASLSNSAATLWHPRAHRDWVRPGVILYGASPTGMAADIEGTGLMSAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG + ++ +   I + A GYADGYP    G    H         
Sbjct: 237 SELIAIQDLQPGATIGYGSRFQVEQPMRIGIVACGYADGYPRHAPGWGGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+ +     VG  + ++G  + +D+VA A+GT  Y+L+ 
Sbjct: 290 VLVDGVRTRMVGRVSMDMITVDLAEVPGARVGTPVTLWGQGLPIDEVAHAAGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALALRVP 356


>gi|327187996|gb|EGE55226.1| putative alanine racemase [Rhizobium etli CNPAF512]
          Length = 386

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 185/365 (50%), Positives = 246/365 (67%), Gaps = 2/365 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR AAVVK +AYG+G E    ALY AG +DFFV +V+
Sbjct: 18  LRLTVDLTALTENWRDMARRSGAARAAAVVKADAYGMGIEDAGEALYTAGARDFFVATVD 77

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P+ARIFVL GI PG E+  FD +L+PVISS  QL F+  +++    +P AL
Sbjct: 78  EGVTLRLYAPEARIFVLSGIWPGTERRFFDNDLVPVISSEEQLAFWMAVLADYGDYPCAL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTGFNRLGL + +A+    +          L++SHLAC DDPS  +N  QLE FR + 
Sbjct: 138 HVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSHLACGDDPSHAMNRQQLESFRRVT 197

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y+G+++SLA+S+GI LG +YHF+LTRPGI+LYGG      ++PM+ V TAEARII +R
Sbjct: 198 AAYEGVDSSLAASAGIFLGEDYHFELTRPGIALYGGEAVCGMANPMRPVATAEARIIQVR 257

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE VSYG   +L RDS +A+ + GYADGY  + S         V  GG+GFI G+ 
Sbjct: 258 TVKAGETVSYGRALQLPRDSRLAIVSAGYADGYMRSQSSGGVPLRQVVPQGGQGFIAGHK 317

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+ITMD+T+FD+TD     +  GDY+++FG ++ LDDVA A+GT  Y++L  +G R
Sbjct: 318 VPVAGRITMDLTIFDVTDLPENAVRAGDYVELFGKNVALDDVARAAGTIGYEILTSMGLR 377

Query: 365 YAKFY 369
           + + Y
Sbjct: 378 HERRY 382


>gi|57650742|ref|YP_186876.1| alanine racemase [Staphylococcus aureus subsp. aureus COL]
 gi|87161019|ref|YP_494673.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195971|ref|YP_500784.1| alanine racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|151222187|ref|YP_001333009.1| alanine racemase [Staphylococcus aureus subsp. aureus str. Newman]
 gi|161510282|ref|YP_001575941.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141592|ref|ZP_03566085.1| alanine racemase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258453219|ref|ZP_05701210.1| alanine racemase [Staphylococcus aureus A5948]
 gi|262049241|ref|ZP_06022116.1| alanine racemase [Staphylococcus aureus D30]
 gi|262052487|ref|ZP_06024685.1| alanine racemase [Staphylococcus aureus 930918-3]
 gi|282923060|ref|ZP_06330745.1| alanine racemase [Staphylococcus aureus A9765]
 gi|284025106|ref|ZP_06379504.1| alanine racemase [Staphylococcus aureus subsp. aureus 132]
 gi|294850555|ref|ZP_06791282.1| alanine racemase [Staphylococcus aureus A9754]
 gi|6647411|sp|Q9ZAH5|ALR1_STAA8 RecName: Full=Alanine racemase 1
 gi|81694088|sp|Q5HED1|ALR1_STAAC RecName: Full=Alanine racemase 1
 gi|123484988|sp|Q2FF55|ALR_STAA3 RecName: Full=Alanine racemase
 gi|172048975|sp|A6QIR5|ALR_STAAE RecName: Full=Alanine racemase
 gi|3850851|emb|CAA76221.1| alr protein [Staphylococcus aureus]
 gi|57284928|gb|AAW37022.1| alanine racemase [Staphylococcus aureus subsp. aureus COL]
 gi|87126993|gb|ABD21507.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203529|gb|ABD31339.1| alanine racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|150374987|dbj|BAF68247.1| alanine racemase [Staphylococcus aureus subsp. aureus str. Newman]
 gi|160369091|gb|ABX30062.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257859165|gb|EEV82022.1| alanine racemase [Staphylococcus aureus A5948]
 gi|259159608|gb|EEW44654.1| alanine racemase [Staphylococcus aureus 930918-3]
 gi|259162606|gb|EEW47173.1| alanine racemase [Staphylococcus aureus D30]
 gi|269941671|emb|CBI50078.1| alanine racemase [Staphylococcus aureus subsp. aureus TW20]
 gi|282593251|gb|EFB98248.1| alanine racemase [Staphylococcus aureus A9765]
 gi|294822575|gb|EFG39017.1| alanine racemase [Staphylococcus aureus A9754]
 gi|315196997|gb|EFU27339.1| alanine racemase [Staphylococcus aureus subsp. aureus CGS01]
 gi|329314756|gb|AEB89169.1| Alanine racemase 1 [Staphylococcus aureus subsp. aureus T0131]
 gi|329724022|gb|EGG60546.1| alanine racemase [Staphylococcus aureus subsp. aureus 21189]
 gi|329729286|gb|EGG65694.1| alanine racemase [Staphylococcus aureus subsp. aureus 21193]
          Length = 382

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|15925060|ref|NP_372594.1| alanine racemase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927645|ref|NP_375178.1| alanine racemase [Staphylococcus aureus subsp. aureus N315]
 gi|21283723|ref|NP_646811.1| alanine racemase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486864|ref|YP_044085.1| alanine racemase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|148268522|ref|YP_001247465.1| alanine racemase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394586|ref|YP_001317261.1| alanine racemase [Staphylococcus aureus subsp. aureus JH1]
 gi|156980386|ref|YP_001442645.1| alanine racemase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315700|ref|ZP_04838913.1| alanine racemase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255006859|ref|ZP_05145460.2| alanine racemase [Staphylococcus aureus subsp. aureus Mu50-omega]
 gi|257794520|ref|ZP_05643499.1| alanine racemase [Staphylococcus aureus A9781]
 gi|258411250|ref|ZP_05681528.1| alanine racemase [Staphylococcus aureus A9763]
 gi|258419766|ref|ZP_05682732.1| alanine racemase [Staphylococcus aureus A9719]
 gi|258438073|ref|ZP_05689452.1| alanine racemase 1 [Staphylococcus aureus A9299]
 gi|258441321|ref|ZP_05690806.1| alanine racemase 1 [Staphylococcus aureus A8115]
 gi|258446985|ref|ZP_05695137.1| alanine racemase [Staphylococcus aureus A6300]
 gi|258449782|ref|ZP_05697882.1| alanine racemase [Staphylococcus aureus A6224]
 gi|258453480|ref|ZP_05701459.1| alanine racemase 1 [Staphylococcus aureus A5937]
 gi|269203705|ref|YP_003282974.1| alanine racemase [Staphylococcus aureus subsp. aureus ED98]
 gi|282895219|ref|ZP_06303435.1| alanine racemase [Staphylococcus aureus A8117]
 gi|282929298|ref|ZP_06336869.1| alanine racemase [Staphylococcus aureus A10102]
 gi|295407616|ref|ZP_06817407.1| alanine racemase [Staphylococcus aureus A8819]
 gi|296275701|ref|ZP_06858208.1| alanine racemase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246613|ref|ZP_06930444.1| alanine racemase [Staphylococcus aureus A8796]
 gi|54036714|sp|P63480|ALR1_STAAN RecName: Full=Alanine racemase 1
 gi|54036715|sp|P63481|ALR1_STAAW RecName: Full=Alanine racemase 1
 gi|54040680|sp|P63479|ALR1_STAAM RecName: Full=Alanine racemase 1
 gi|60389600|sp|Q6G7N9|ALR1_STAAS RecName: Full=Alanine racemase 1
 gi|13701865|dbj|BAB43157.1| alanine racemase [Staphylococcus aureus subsp. aureus N315]
 gi|14247843|dbj|BAB58232.1| alanine racemase [Staphylococcus aureus subsp. aureus Mu50]
 gi|21205165|dbj|BAB95859.1| alanine racemase [Staphylococcus aureus subsp. aureus MW2]
 gi|49245307|emb|CAG43782.1| alanine racemase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|147741591|gb|ABQ49889.1| alanine racemase [Staphylococcus aureus subsp. aureus JH9]
 gi|149947038|gb|ABR52974.1| alanine racemase [Staphylococcus aureus subsp. aureus JH1]
 gi|156722521|dbj|BAF78938.1| alanine racemase [Staphylococcus aureus subsp. aureus Mu3]
 gi|257788492|gb|EEV26832.1| alanine racemase [Staphylococcus aureus A9781]
 gi|257840005|gb|EEV64471.1| alanine racemase [Staphylococcus aureus A9763]
 gi|257844248|gb|EEV68631.1| alanine racemase [Staphylococcus aureus A9719]
 gi|257848490|gb|EEV72480.1| alanine racemase 1 [Staphylococcus aureus A9299]
 gi|257852365|gb|EEV76290.1| alanine racemase 1 [Staphylococcus aureus A8115]
 gi|257854218|gb|EEV77169.1| alanine racemase [Staphylococcus aureus A6300]
 gi|257856956|gb|EEV79857.1| alanine racemase [Staphylococcus aureus A6224]
 gi|257864352|gb|EEV87101.1| alanine racemase 1 [Staphylococcus aureus A5937]
 gi|262075995|gb|ACY11968.1| alanine racemase [Staphylococcus aureus subsp. aureus ED98]
 gi|282589108|gb|EFB94207.1| alanine racemase [Staphylococcus aureus A10102]
 gi|282762409|gb|EFC02553.1| alanine racemase [Staphylococcus aureus A8117]
 gi|285817735|gb|ADC38222.1| Alanine racemase [Staphylococcus aureus 04-02981]
 gi|294967514|gb|EFG43552.1| alanine racemase [Staphylococcus aureus A8819]
 gi|297176513|gb|EFH35779.1| alanine racemase [Staphylococcus aureus A8796]
 gi|312830422|emb|CBX35264.1| alanine racemase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315128410|gb|EFT84419.1| alanine racemase [Staphylococcus aureus subsp. aureus CGS03]
 gi|329727774|gb|EGG64226.1| alanine racemase [Staphylococcus aureus subsp. aureus 21172]
          Length = 382

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+              +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|327458867|gb|EGF05215.1| alanine racemase [Streptococcus sanguinis SK1057]
          Length = 369

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRSSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSKHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALAAEKDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGTVLKLPYEFEPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSESQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQAYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|121635291|ref|YP_975536.1| alanine racemase [Neisseria meningitidis FAM18]
 gi|166969422|sp|A1KV59|ALR_NEIMF RecName: Full=Alanine racemase
 gi|120866997|emb|CAM10760.1| alanine racemase [Neisseria meningitidis FAM18]
 gi|254669582|emb|CBA03582.1| Alanine racemase [Neisseria meningitidis alpha153]
 gi|254672097|emb|CBA04784.1| Alanine racemase [Neisseria meningitidis alpha275]
 gi|325133023|gb|EGC55697.1| alanine racemase [Neisseria meningitidis M6190]
 gi|325138687|gb|EGC61240.1| alanine racemase [Neisseria meningitidis ES14902]
 gi|325142822|gb|EGC65192.1| alanine racemase [Neisseria meningitidis 961-5945]
 gi|325198750|gb|ADY94206.1| alanine racemase [Neisseria meningitidis G2136]
          Length = 352

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 157/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYQILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +         
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|254832148|ref|ZP_05236803.1| hypothetical protein Lmon1_12409 [Listeria monocytogenes 10403S]
 gi|3414683|gb|AAC31362.1| alanine racemase [Listeria monocytogenes]
          Length = 368

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +       +    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPESVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++   + 
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKKRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    +  DD A    
Sbjct: 294 ---HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTVTADDAAQYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|167565411|ref|ZP_02358327.1| alanine racemase [Burkholderia oklahomensis EO147]
          Length = 374

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+  N   +   +  +R  +VVK NAYG G E+I PAL +       +  
Sbjct: 3   RPIVARIHPDAVARNLAIVRQKAPRSRIWSVVKANAYGHGIERIYPALAD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       I +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPILLLEGIFEAADVEIADRHRLTVAVHGDEQLTLLTSAKTARPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPGAFRAAWERAAAAPSIGDIALVMHFANADEGE---IDWQMRAFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
           +     G E +L++S+ +L  P  H    RPG  LYG +      H    P+Q  +T  +
Sbjct: 178 VTDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHLADVPLQPAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++   AGE V YG +    R+  I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAAGETVGYGRRFTAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+LL  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGAQVRVDDVAEAAGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|330470100|ref|YP_004407843.1| alanine racemase [Verrucosispora maris AB-18-032]
 gi|328813071|gb|AEB47243.1| alanine racemase [Verrucosispora maris AB-18-032]
          Length = 372

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 165/377 (43%), Gaps = 27/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +++DL A++ N   M A + +A   AVVK + YG G    A A  +AG     V +++
Sbjct: 4   AEVRVDLDAIRENVDRMRAGT-SAELMAVVKADGYGHGMVPAARAALDAGATWLGVCTLD 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR     A +                 ++   ++S+PQ                  
Sbjct: 63  EALALRAAGIDAPVLAWLLAPGLPLHTGVAADVDLGVASLPQLDEAVEASRRAQRPARVH 122

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERF 182
           L++DTG +R G ++ +       +   +   L ++  + SH   AD P       QL  F
Sbjct: 123 LKIDTGLSRNGATVADWPALLDAAAKAQADGLVEVVGVWSHFVYADMPGHPTTDRQLAVF 182

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +     +  +     LA+S+  L  P+ HF L RPG+++YG +    ++H ++  +T
Sbjct: 183 HEGLAMVERAGLRPRYRHLANSAATLTRPDTHFDLVRPGLAVYGLSPVAGETHGLRPAMT 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           A AR++L ++  AG  VSYG      RD+ +AV  +GYADG P   S             
Sbjct: 243 ARARVMLTKRVPAGTGVSYGHTYTTERDANLAVVPLGYADGVPRHASNT----------- 291

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
           G   + G    I G++ MD  + D  D   +  GD   +FG     +   DD A A GT 
Sbjct: 292 GPVQLGGRRRTISGRVCMDQFVLDCGDDP-VAAGDVATLFGSGADGEPTADDWAEAVGTI 350

Query: 354 NYDLLVRIG-TRYAKFY 369
           NY+++ R G +R  + Y
Sbjct: 351 NYEIVTRFGSSRVPRVY 367


>gi|332828347|gb|EGK01056.1| hypothetical protein HMPREF9455_02578 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 823

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 157/369 (42%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +DL A+ +N+      L+   +   +VK + YG G  ++A  L         V   EE
Sbjct: 465 LDVDLDAIVHNFKFYRSKLNPKTKMICMVKADGYGTGSSEVAKTLQYHKCDYLAVAVAEE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYAL 126
           GV LR    +  I VL     G E++   +    V +      F  +    G++ +P  +
Sbjct: 525 GVILRKQGIKVPIIVLNSEVGGFEELATYSLEPEVYNFRILDAFIKEAKLQGITNYPIHI 584

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG + ++  +       +   ++  + SHLA ++          Q++ F+ +
Sbjct: 585 KIDTGMHRLGFTEEDIPELMDRVKGQTGVRIQSVFSHLAASESWNFDDFTLQQIKTFKKI 644

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                   +  +   + +S+GI   P     + R GISLYG +             T + 
Sbjct: 645 AGEVEDSCHYPVMKHILNSAGIERFPEEQLDMVRLGISLYGVSASGLNGLRNVC--TLKT 702

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+   AGE V YG +     D+ IA   IGYADG                   G  
Sbjct: 703 TILQIKHIKAGETVGYGRKGHFDHDATIATIRIGYADGISRQFGNGV----------GVV 752

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + GY V I+G I MD+TM D+T    ++ GD + IFG ++ + D+A    T  Y++   
Sbjct: 753 LVNGYQVSIVGNICMDLTMIDVTGI-EVKEGDIVTIFGENLPVTDLAKKINTIPYEIFTS 811

Query: 361 IGTRYAKFY 369
           I  R    Y
Sbjct: 812 ISNRVKHIY 820


>gi|256831867|ref|YP_003160594.1| alanine racemase [Jonesia denitrificans DSM 20603]
 gi|256685398|gb|ACV08291.1| alanine racemase [Jonesia denitrificans DSM 20603]
          Length = 410

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/383 (26%), Positives = 152/383 (39%), Gaps = 28/383 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSG----NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           R  IDL A+  N  ++    G    +A   AVVK NAYG G    A A  + G     V 
Sbjct: 15  RAIIDLAAISQNVSTLATRLGDNGSHAAIMAVVKANAYGHGLVPAARAALHGGATWLGVA 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
              E + LR      RI           + +   ++   +++        S   + G   
Sbjct: 75  HAHEALALRQAGITDRILTWLHAPGVPYRDLIAADIDVSVAAPWAAQEVISAAQAAGRPA 134

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNSVQL 179
              L+VDTG  R G++  +         + +         + SHLA AD+P       Q 
Sbjct: 135 RVHLKVDTGLGRNGVTPADLPFLLATLIDAQHAGHLTLVGVWSHLAFADEPHHPSVREQA 194

Query: 180 ERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSH 230
             F   I+  +   A L      +S+  L  P   + L RPG+++YG +           
Sbjct: 195 RVFDDAITIVQAAGAHLEVRHIANSAATLTAPELAYDLVRPGLAIYGLSPIPQVASAAEL 254

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +T +A I   ++  AG  VSY       RD+ IAV  +GYADG P   SG + E 
Sbjct: 255 GLRPAMTVQADIATAKRLPAGHGVSYAHHYVTARDTHIAVIPLGYADGIPRHASGHNGE- 313

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                LG    I G    I G++ MD  + D+ D  S+  G    +FG            
Sbjct: 314 -----LGAPVSINGVTYAIAGRVCMDQIVIDVHDD-SVRAGHTATLFGDPTLGVPSAQQW 367

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A+GT +Y++  RI  R  + Y
Sbjct: 368 ADATGTISYEITTRIADRLPRMY 390


>gi|91977460|ref|YP_570119.1| alanine racemase [Rhodopseudomonas palustris BisB5]
 gi|91683916|gb|ABE40218.1| alanine racemase [Rhodopseudomonas palustris BisB5]
          Length = 409

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 125/365 (34%), Positives = 184/365 (50%), Gaps = 10/365 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL A+  NW  +   +  A  AAVVK +AYG G   ++ AL  AG + FFV ++ E 
Sbjct: 36  LTVDLDAIVANWRKIEKTAVPAEAAAVVKGDAYGCGIGPVSKALAAAGCKTFFVATLGEA 95

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R   P A I+VL G            N  PVI  + +L  +         S   A+ 
Sbjct: 96  GAVRAIAPDAVIYVLDGFFQTTGDEFARLNCRPVIGDLYELAEWDVYCRRTRWSGGAAIH 155

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL++ EA              ++L+ISHLA A+  +  +N+ Q+  FR + S
Sbjct: 156 IDTGMNRLGLTVAEAQGIVPRIAA-GDHGITLVISHLAAAEALNHPMNARQVTAFREIAS 214

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSG+ LGP + F + RPG +LYG        +PM+ VV  +ARI+ +R 
Sbjct: 215 LFTGVAASLSASSGVFLGPQFAFDMVRPGAALYGINPTPEADNPMKPVVDLKARIVQVRS 274

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YGG     R + IAV + GYADGY       D         G    I G   
Sbjct: 275 VERGDSVGYGGTWTARRPTRIAVLSAGYADGYFRAAGSNDGTR------GADVVIAGQRC 328

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           PI G+++MD+   D+TD    +   G    + G  I +D++    GT  Y++L  +G RY
Sbjct: 329 PIAGRVSMDLLAVDVTDLPANAARRGLMATLIGDGITVDELGHHFGTIGYEVLTSLGARY 388

Query: 366 AKFYT 370
           A+ Y+
Sbjct: 389 ARIYS 393


>gi|227494580|ref|ZP_03924896.1| alanine racemase [Actinomyces coleocanis DSM 15436]
 gi|226832314|gb|EEH64697.1| alanine racemase [Actinomyces coleocanis DSM 15436]
          Length = 397

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 95/403 (23%), Positives = 164/403 (40%), Gaps = 41/403 (10%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  +   R  ID+ A+ +N   + A + N +   VVK +AYG G   +A AL  AG +  
Sbjct: 1   MVYSYPARALIDIAAITHNAKLLLAKAPNTQHLGVVKADAYGHGHASVAVALARAGYRAI 60

Query: 61  FVTSVEEGVKLRLYTPQA---RIFVLYGIHPGQ----EKIIFDTNLIPVISSVPQLTFYS 113
            V  +EE + +R     A    + +   + P           +  +    S+  Q+   +
Sbjct: 61  GVAQIEEALAVRDALDIAGFYDVMLFSWVIPADGTLVASEAIERGIEVAASTPVQVAMLN 120

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                       L++DTG +R G +L E      ++      ++  + SHLACAD+ +  
Sbjct: 121 DCAMLRNPARLHLKIDTGMSRAGATLDEFAQLIEDALAAPNIKIVGVWSHLACADELTED 180

Query: 174 ---VNSVQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
                + Q + F            +     L ++S  L  P   + + R GI +YG T  
Sbjct: 181 GMAATNAQKDVFDRACQMLSDYGVRDFTRHLGATSVTLWHPQLQYDMVRDGIGIYGLTPN 240

Query: 226 IN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
                 +   +  V+   A ++ +++   G  VSYGG      D  + +  +GY DG P 
Sbjct: 241 PETASSEELGLMPVMNLSANLMQVKRIKQGAKVSYGGTWVAETDRWLGLVPLGYGDGVPR 300

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE---------VGD 332
             S        SV+ GG+        P++G++ MD  M D+  ++  +          GD
Sbjct: 301 HASNHAEV---SVYAGGRVM----RCPVVGRVCMDQFMIDLGPAVDAQGVDLPAPAVAGD 353

Query: 333 YIQIFGPD------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              +FG          +DD A A  T NY+++ R+G+R  + Y
Sbjct: 354 TAVLFGNPERFPGCPSVDDWAQACDTINYEIVTRLGSRVPREY 396


>gi|297210110|ref|ZP_06926503.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910473|ref|ZP_07127925.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296885310|gb|EFH24250.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300888315|gb|EFK83506.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 390

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 21  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 81  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 140

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+              +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 141 DTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 199

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 200 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 260 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 307

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 308 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 365

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 366 CNLSRRLPRIY 376


>gi|218532193|ref|YP_002423009.1| alanine racemase [Methylobacterium chloromethanicum CM4]
 gi|218524496|gb|ACK85081.1| alanine racemase [Methylobacterium chloromethanicum CM4]
          Length = 342

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 117/352 (33%), Positives = 180/352 (51%), Gaps = 14/352 (3%)

Query: 18  NNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
            NW ++ A +  A   AVVK +AYG G   +APAL+ AG + FFV  + EG+  R   P+
Sbjct: 3   ANWRALGACAPQAECGAVVKADAYGCGLAAVAPALWRAGCRTFFVAHLSEGIAARKMLPE 62

Query: 78  ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
           A ++VL G+ PG  +      L PV+    +L  +++ M  G      +  DTG NRLGL
Sbjct: 63  AALYVLNGLPPGHAEAFRAHRLRPVLGDAQELAEWAEAMQGGGPAALHV--DTGMNRLGL 120

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
           S+ EAL    +    + G    ++SHL  A+ P   +N+ Q   F  + + +  + ASLA
Sbjct: 121 SVAEALALAGDPVIARAGIDL-VMSHLVSAELPDDPLNARQAADFARVRAAFPQMRASLA 179

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +SSG  L  +    L RPG +L+GG     + +PM+ VV  EA I+ +R   AG    Y 
Sbjct: 180 NSSGTCLANDARHDLLRPGYALFGGNPDPGQPNPMRPVVRLEATILQVRDVEAGATCGYN 239

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            + +      +A  ++GYADGYP + S             G   + G   PI+G I+MD+
Sbjct: 240 ARWQAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGMPCPIVGLISMDL 288

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + D+TD+     G    + G  + +D V  A+GT  Y++L  +G+RY + Y
Sbjct: 289 IILDVTDASQARRGGTATLIGDSLDIDTVGQAAGTIGYEILTSLGSRYVRNY 340


>gi|304379251|ref|ZP_07361990.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|304342110|gb|EFM08010.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|320140759|gb|EFW32611.1| alanine racemase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143734|gb|EFW35511.1| alanine racemase [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 390

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 21  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 81  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 140

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 141 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 199

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 200 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 260 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 307

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++ VA    T NY++L
Sbjct: 308 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVL 365

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 366 CNLSRRLPRIY 376


>gi|325833467|ref|ZP_08165916.1| alanine racemase [Eggerthella sp. HGA1]
 gi|325485391|gb|EGC87860.1| alanine racemase [Eggerthella sp. HGA1]
          Length = 467

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 99/386 (25%), Positives = 157/386 (40%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +   +IDL A+++N  ++        R  AVVK + YG G  + A    N+G     V
Sbjct: 92  RRWSWTEIDLNAIRHNTSAVKQRIDNGVRLMAVVKADGYGHGAVRCAKTALNSGADYLGV 151

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVS 121
            +V E ++LR     A I VL         ++    ++P +  S   + +     + GV 
Sbjct: 152 ATVNEAIELREALVNAPILVLSQPPETAIPLLLAYKVMPSVYTSEFAIQYAEAADAYGVR 211

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            PY L V+TG NR+G+   E ++F       +   L    +H A AD   +    +Q++R
Sbjct: 212 APYHLAVNTGMNRIGVRHDEVVEFMGQVSFHRALDLVGTFTHFATADSAETLDFQIQVKR 271

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQT 234
           F   +     +         A+S+  +  P+  F + R GI++YG            +  
Sbjct: 272 FIEAVTALRTAGVNPGIVHAANSAAAIRYPDVQFDMVRLGIAMYGLHPSGVTRPMIDLHP 331

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  +R     E VSYG   +      I    +GYADG    LSG         
Sbjct: 332 AMSVHARITDVRTVPMSEGVSYGMNYRSPGSVKICTVPVGYADGLRRGLSGR-------- 383

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT-------DSLSIEVGDYIQIFGPD----IKL 343
                  +KG     +G I MD  MF++          L   +GD + + G +    I L
Sbjct: 384 ---TDVILKGQRCHQVGNICMDQCMFEVDLRVYGSRRRLDPMIGDEVLLVGREGDSVITL 440

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           DD+A   GT NY+L      R  + Y
Sbjct: 441 DDMANTLGTINYELACGFSLRMPRVY 466


>gi|304396143|ref|ZP_07378025.1| alanine racemase [Pantoea sp. aB]
 gi|304356512|gb|EFM20877.1| alanine racemase [Pantoea sp. aB]
          Length = 356

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL+ N   +   +  +R  +VVK NAYG G E++  AL       F + 
Sbjct: 2   SRPIIATINQQALRQNLAVVRQAAPASRVWSVVKANAYGHGIERVREALSA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE ++LR    +  I +L G    ++  + D   +                       
Sbjct: 60  NMEEAIQLREQGWKKPILLLEGFFQPEDLQLIDRYRLTTSVHSNWQIKALASAQLSAPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++                  +++H A A++    V  +Q     
Sbjct: 120 IYLKMNSGMNRLGFRPEQVNGAWQKLRALSNVGEMTLMAHFADAENSQGLVAPLQRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +   N        +Q V+T  
Sbjct: 177 EQAAEGLSCPRSLSNSACTLWHPEAHFDWVRPGIILYGASPSGNWQDIAGSGLQPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AG+ V YG +   +    I V A GYADGYP                G  
Sbjct: 237 SEIIAVQQLQAGDGVGYGYRYHASTAQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G M  ++G ++MDM   D+T      +G  ++++G  +K+D VA A+GT  Y+L+ 
Sbjct: 286 VCVDGVMTQVVGAVSMDMITVDLTPCPQAGIGSAVELWGEQVKIDQVAKAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|15677500|ref|NP_274656.1| alanine racemase [Neisseria meningitidis MC58]
 gi|20137239|sp|Q9JYC4|ALR_NEIMB RecName: Full=Alanine racemase
 gi|7226902|gb|AAF42000.1| alanine racemase [Neisseria meningitidis MC58]
 gi|316984996|gb|EFV63950.1| alanine racemase [Neisseria meningitidis H44/76]
 gi|325140795|gb|EGC63306.1| alanine racemase [Neisseria meningitidis CU385]
 gi|325199755|gb|ADY95210.1| alanine racemase [Neisseria meningitidis H44/76]
          Length = 352

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 158/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYRILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +     +   
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKTVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|317490383|ref|ZP_07948867.1| alanine racemase [Eggerthella sp. 1_3_56FAA]
 gi|316910518|gb|EFV32143.1| alanine racemase [Eggerthella sp. 1_3_56FAA]
          Length = 467

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 100/386 (25%), Positives = 158/386 (40%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +   +IDL A+++N  ++        R  AVVK + YG G  + A    N+G     V
Sbjct: 92  RRWSWTEIDLNAIRHNTSAVKQRIDNGVRLMAVVKADGYGHGAVRCAKTALNSGADYLGV 151

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVS 121
            +V E ++LR     A I VL         ++    ++P +  S   + +     + GV 
Sbjct: 152 ATVNEAIELREALVNAPILVLSQPPETAIPLLLAYKVMPSVYTSEFAIQYAEAADAYGVR 211

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            PY L V+TG NR+G+   E ++F       +   L    +H A AD   +    +Q++R
Sbjct: 212 APYHLAVNTGMNRIGVRHDEVVEFMGQVSFHRALDLVGTFTHFATADSAETLDFQIQVKR 271

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQT 234
           F   +     +         A+S+  +  P+  F + R GI++YG    I       +  
Sbjct: 272 FIEAVTALRTAGVNPGIVHAANSAAAIRYPDVQFDMVRLGIAMYGLHPSIVTRPMIDLHP 331

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  +R     E VSYG   +      I    +GYADG    LSG         
Sbjct: 332 AMSVHARITDVRTVPMSEGVSYGMNYRSPGSVKICTVPVGYADGLRRGLSGR-------- 383

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT-------DSLSIEVGDYIQIFGPD----IKL 343
                  +KG     +G I MD  MF++          L   +GD + + G +    I L
Sbjct: 384 ---TDVILKGQRCHQVGNICMDQCMFEVDLRVYGSRRRLDPMIGDEVLLVGREGDSVITL 440

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           DD+A   GT NY+L      R  + Y
Sbjct: 441 DDMANTLGTINYELACGFSLRMPRVY 466


>gi|296138608|ref|YP_003645851.1| alanine racemase [Tsukamurella paurometabola DSM 20162]
 gi|296026742|gb|ADG77512.1| alanine racemase [Tsukamurella paurometabola DSM 20162]
          Length = 380

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 160/378 (42%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +     IDL A+ +N   +   +  A   AV+K + YG G   +A A    G  +  VT+
Sbjct: 12  DRPTALIDLGAVTHNVRVVARHAPTADVMAVLKADGYGHGAVPVARAALAGGATELGVTT 71

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+E + LR       I   +    G E+ I     I V S        +     G     
Sbjct: 72  VDEALVLRDAGITVPIL-SWLSTSGYERAIAADVRIGVSSPRQLAEVLAAAGRAGAPAVL 130

Query: 125 ALQVDTGFNRLGLSLQEAL---DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ--- 178
            ++VDTG NR G++  E     D   ++    L +L  + +HLA  D+P      VQ   
Sbjct: 131 HVKVDTGLNRNGVAPHEWATTRDALVDAERAGLARLQGVFTHLAHGDEPDHPFLDVQRDA 190

Query: 179 --LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                           +   A+S+  L  P+ HF L RPGI++YGG    ++   ++ V+
Sbjct: 191 LAAAAADARAHGLYPTQVHAANSAAALTRPDLHFDLVRPGIAIYGGVPVPDRDFGLRPVM 250

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A +IL++   AG+ VSYG      RD+++ +   GYADG    LSG           
Sbjct: 251 TFAAPVILVKPLAAGDGVSYGHTWIAPRDTVVGLVPAGYADGVWRPLSGRF--------- 301

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDIKLD---DVALASGT 352
             +  ++G   P +G++ MD  + D+  D   +  GD   +FG         D     GT
Sbjct: 302 --EVTVQGRRFPQVGRVCMDQFVIDLGPDGGGVSEGDTAVLFGAAPGAARACDWGEKLGT 359

Query: 353 TNYDLLVRIGTRYAKFYT 370
            +Y++L  +  R  + YT
Sbjct: 360 IDYEVLTAVRGRVHREYT 377


>gi|302337870|ref|YP_003803076.1| alanine racemase [Spirochaeta smaragdinae DSM 11293]
 gi|301635055|gb|ADK80482.1| alanine racemase [Spirochaeta smaragdinae DSM 11293]
          Length = 371

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 160/378 (42%), Gaps = 24/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              + +IDL   ++N   ++  +G  +   VVK NAYG G  K+A     AG Q   V +
Sbjct: 2   RPTKARIDLDLYRHNIRVISKKTGGRKICLVVKANAYGHGSVKMAKVGIEAGAQALGVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHP 123
           V+E ++LR     A IF+       +   +   ++IP +S +  +    +          
Sbjct: 62  VDEALELREAGIAAPIFLFTVADVSEVPQLVRFDIIPFVSDLAYIKQIEREAQNQEKVAM 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+VDTG  RLG   +EAL       N K   +  + +H + +D        +Q+ R  
Sbjct: 122 VHLKVDTGMGRLGCRPEEALSLASFVGNSKNLMMGGLCTHFSLSDISDRAYTLLQINRLN 181

Query: 184 TLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPM----QT 234
            L+     + I   L  ++     +  P  ++ + RPG+ ++G    +          + 
Sbjct: 182 LLVDTLRSQHIPYGLVHAANTGAIIQYPEAYYDMVRPGLGIFGYPPDLIHMGRDRADLRP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++ E +I LI+    GE VSYG       D+ I V A G+ DGYP +LS          
Sbjct: 242 VLSMETKIGLIKTIKKGESVSYGRTFVAENDTHIGVVAAGFCDGYPRSLSN--------- 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG---PDIKLDDVALASG 351
              G   IKG   P++G + MD  + D+   L ++  D + + G    +  + D+     
Sbjct: 293 --KGFVTIKGKHYPVIGMVCMDQLIVDLGRDLQVDPDDTVVLLGHGRNEPTMVDLTQRGN 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
               +++ RI  R  K Y
Sbjct: 351 IIVNEVICRIPARVPKVY 368


>gi|229083529|ref|ZP_04215867.1| Alanine racemase [Bacillus cereus Rock3-44]
 gi|228699783|gb|EEL52430.1| Alanine racemase [Bacillus cereus Rock3-44]
          Length = 389

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 86/378 (22%), Positives = 153/378 (40%), Gaps = 29/378 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++++L A+ NN   +  +   N    AVVK N+YG     +A     AG     V  +
Sbjct: 10  TWVEVNLDAIYNNVTHIKKMIPENVEVFAVVKGNSYGHDYVPVAKTALEAGATRLAVAFL 69

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I VL    P    +  + ++   +     +    ++    V   + 
Sbjct: 70  DEALVLRRSGITAPILVLGPSSPRVVNVAAENDVALTVFQREWVEEALEIWDSSVPLRFH 129

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L  D+G  R+G+   +E   F  +        L  + +H + AD+  +     Q   F  
Sbjct: 130 LNFDSGMGRIGIREREELKGFLRSLEEAPFFDLEGVYTHFSTADEVGTSYFDKQYNTFLK 189

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
            +S  +G          A+S+  +      F   R GI +YG T  +         ++  
Sbjct: 190 QLSWLQGFGVDPKFIHAANSAATMRFHGITFNAVRIGIVMYGLTPSLEIFPFIPIQLEPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++    +  I++ + G+ +SYG   +   +  IA   IGYADG+   L G          
Sbjct: 250 LSLHTTVSHIKQVIKGDGISYGVTYRTKIEEWIATVPIGYADGWLRRLQGF--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              K  + G  VPI+G++TMD  M  +     + +G  + + G      I  ++VA  SG
Sbjct: 301 ---KVLVDGERVPIVGRVTMDQLMLHLP--YEVPLGTKVTLIGKQGDEYISANEVAEYSG 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY+++  I  R  + +
Sbjct: 356 TINYEIITTISFRVPRIF 373


>gi|298207069|ref|YP_003715248.1| alanine racemase [Croceibacter atlanticus HTCC2559]
 gi|83849703|gb|EAP87571.1| alanine racemase [Croceibacter atlanticus HTCC2559]
          Length = 368

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 158/378 (41%), Gaps = 21/378 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M   +   L+I+L+AL +N++ + +    + +  AVVK   YG     +A  L   G   
Sbjct: 1   MPKAQETVLEINLSALGHNYNYLKSKVNTSVKLMAVVKAFGYGSDSVMVAKELQTLGADY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V    EGV+LR       I VL+       K + +  L P I S+  L  +       
Sbjct: 61  FAVAYTSEGVRLRDENITTPILVLHP-LANAFKELIERCLEPSIYSLKTLREFIATAQTL 119

Query: 119 -GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNS 176
               +P  L+ ++G NRLG + ++  +      N    +++ ++SHL A  D   +    
Sbjct: 120 KQKEYPIHLKFNSGLNRLGFNEKDVPEMYSLLKNTTAVKVTSLMSHLVASEDHNLTDFTH 179

Query: 177 VQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+  F +    +            +++SGIL  P  HF + R GI LYG  +   +   
Sbjct: 180 NQISSFVSFTEDFKTEFGYMPMRHQSNTSGILNFPEAHFDMVRSGIGLYGYGNSSTEDLA 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ + T ++ I  +     G  V Y       R ++ A   +G+ADG             
Sbjct: 240 LKPIATLKSVISQLHNIPKGSSVGYNRGFIADRTTVSATIPLGHADGIGRQYG------- 292

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G   + G   PILG + MDMTM D+T     + GD + IFG      + A  + 
Sbjct: 293 ---KGKGCFIVNGKKAPILGNVCMDMTMVDVTGI-ECQEGDEVIIFGAYQNASEFAKGAQ 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y++L  +  R  + +
Sbjct: 349 TISYEILTSVSQRVKRTF 366


>gi|329113263|ref|ZP_08242046.1| Alanine racemase, catabolic [Acetobacter pomorum DM001]
 gi|326697404|gb|EGE49062.1| Alanine racemase, catabolic [Acetobacter pomorum DM001]
          Length = 381

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 119/366 (32%), Positives = 184/366 (50%), Gaps = 15/366 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L ++L+A+  N+  + +  G    AAVVK +AYGLG  ++AP L  AG + FFV  V+EG
Sbjct: 24  LTVNLSAIAENYRYLKSRLGKTVCAAVVKADAYGLGVAQVAPVLEKAGAEHFFVAHVDEG 83

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           + LR   +    + VL+G  P   ++    NL PV++S+ Q+                A+
Sbjct: 84  LALRPYLSSTTSVTVLHGPRPDAAEVCVRNNLRPVLNSLEQIAVLRELAAKIDKPLDVAI 143

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +R GLS  +      +    +   +SL++SHLACAD P +  N++Q ERF    
Sbjct: 144 QLDTGMSRFGLSEADIHKLAVSPELLEGLSVSLVMSHLACADTPKNPANTMQRERFEAYA 203

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                   SL++SSGI LG  + F L RPG +LYG   +    +P++ VV  +A I+ IR
Sbjct: 204 RMLPKATLSLSASSGIFLGSQFQFDLVRPGAALYGVAPQNEGENPLKPVVGLQAHILQIR 263

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V YG   +      +A  A GY               + +    G  + KGY 
Sbjct: 264 HLSKGDRVGYGLTWQAHGPCRVATIATGY-----------ADGFARAGAAAGCAWYKGYR 312

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PILG+I+MD    D+++     +E    +++      +D VA A GT  Y++L  +G R
Sbjct: 313 LPILGRISMDSMTVDLSEVPEGLLEEDSMVELLNASYGVDAVAKAEGTIGYEVLTSLGRR 372

Query: 365 YAKFYT 370
           Y + YT
Sbjct: 373 YHRVYT 378


>gi|16799958|ref|NP_470226.1| hypothetical protein lin0885 [Listeria innocua Clip11262]
 gi|20137216|sp|Q92DC9|ALR_LISIN RecName: Full=Alanine racemase
 gi|16413335|emb|CAC96117.1| lin0885 [Listeria innocua Clip11262]
          Length = 368

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 94/378 (24%), Positives = 150/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L       AVVK NAYG G  + A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPDKVALWAVVKANAYGHGIIETAKIAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +    ++ G    ++  +   N I   S       +   ++     
Sbjct: 66  AILDEALALREAGFRNEFILVLGATRKEDANLAAKNNI---SVTVFREDWLDDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA              L  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRSREEAQRIETTIAIDHQMILEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA- 238
           F+ ++S        +   +S+  LL P   F   R GIS+YG T      + +   +   
Sbjct: 183 FQAILSSLTTRPTFVHTANSAASLLQPQIDFDAIRFGISMYGLTPSTEIKNSLPFELKPA 242

Query: 239 ---EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                 ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEKEWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 ++G   PI+G+I MD T+  +      + G  + I G D    +  DD A   G
Sbjct: 294 ---HVLVEGERAPIIGRICMDQTIIKLPREF--QTGTKVTIIGSDHGNKVTADDAAEYLG 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLTERIPRKY 366


>gi|315641800|ref|ZP_07896804.1| alanine racemase [Enterococcus italicus DSM 15952]
 gi|315482475|gb|EFU73014.1| alanine racemase [Enterococcus italicus DSM 15952]
          Length = 370

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 85/377 (22%), Positives = 145/377 (38%), Gaps = 26/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R+ I   A++ N  ++   LS +    AV+K N YG G  ++A      GV  F V 
Sbjct: 7   RPTRITIHTEAIRENLRTVQEHLSADQSLFAVIKANGYGHGAVQVAKIAEEEGVAGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV---ISSVPQLTFYSKLMSCGV 120
           +++EG++LR       +F+L  +      I+    L         + Q            
Sbjct: 67  TIDEGIELREAGITLPVFILGLVDCAYLPIVSQYQLAIPVASTDWLKQAEQAYLKNPWDE 126

Query: 121 SHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L ++TG  R+G     E      +    +   L  + +H A AD   +     Q 
Sbjct: 127 PIAVHLAIETGMGRIGFIDSGEVKQAEVSLAQAEGFYLEGVFTHFATADQADATYWQEQK 186

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVV 236
            RF   I+  +       ++S   L       L R G+++YG     +   P       +
Sbjct: 187 ARFFETIAVLEAPRYIHVTNSATQLWHEPLGNLVRYGVAMYGLNPSSDALQPSYSLVPAL 246

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  ++++ +++  +   V YG   + T+D  I    IGYADGY   L G           
Sbjct: 247 SLTSQLVQVKQLPSESGVGYGHTYETTQDEWIGTVPIGYADGYVRKLQGF---------- 296

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                + G    I+G++ MD  M  +     I VG  + + G D    I L D+A   GT
Sbjct: 297 --HVLVNGQFCEIVGRVCMDQLMIRLP--ADIPVGTTVTLIGTDGDKTISLQDIASYIGT 352

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y++   +  R  + Y
Sbjct: 353 IHYEVACLLSERLPREY 369


>gi|313624465|gb|EFR94470.1| alanine racemase [Listeria innocua FSL J1-023]
          Length = 368

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 91/378 (24%), Positives = 149/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +      +     AVVK NAYG G  + A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNRLPDKVALWAVVKANAYGHGIIETAKIAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +    ++ G    ++  +   N I   S       +   ++     
Sbjct: 66  AILDEALALREAGFRNEFILVLGATRKEDANLAAKNNI---SVTVFREDWLNDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA              L  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRSREEAQRIETTIALDHQMILEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA- 238
           F+ ++         +   +S+  LL P   F   R GIS+YG T      + +   +   
Sbjct: 183 FQAILRSLTTRPTFVHTANSAASLLQPQIDFDAIRFGISMYGLTPSTEIKNSLPFELKPA 242

Query: 239 ---EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                 ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELSPGDSVSYGATYTATEKEWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 ++G   PI+G+I MD T+  +      + G  + I G D    +  DD A   G
Sbjct: 294 ---HVLVEGERAPIIGRICMDQTIIKLPREF--QTGTKVTIIGSDHGNKVTADDAAEYLG 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLTERIPRKY 366


>gi|326802039|ref|YP_004319858.1| alanine racemase [Sphingobacterium sp. 21]
 gi|326552803|gb|ADZ81188.1| Alanine racemase [Sphingobacterium sp. 21]
          Length = 820

 Score =  268 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 161/378 (42%), Gaps = 22/378 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + ++E   L+I+L AL++N +   +L     +   +VK  +YG G  +IA  L    V  
Sbjct: 453 LQTHE-TTLEINLNALEHNLNVYKSLLQQGTKLMVMVKAFSYGSGSFEIANLLQFNKVDY 511

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V   +EG+ LR       I V+        + + +  L P I S  +L  +   +   
Sbjct: 512 LTVAYADEGIALRKSGITLPIVVMSPG-EDTFEQMIEYRLEPEIYSFSELEAFISKLPSE 570

Query: 120 V--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNS 176
              ++P  ++VDTG +RLG    +               +  + SHLA +         S
Sbjct: 571 KMEAYPVHIKVDTGMHRLGFEPDDVDRLLAKLKRTDKIVVKSVFSHLAASGIREHDNFTS 630

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+  F                  +A++S I   P   F + R GI LYG +    +S P
Sbjct: 631 EQIRLFDVFTQDLARGLGYHFIRHIANTSAISRFPQAQFDMVRLGIGLYGVSADEYRSLP 690

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q+V      I  ++   AG+ V Y    +L+ D  IA   IGYADGY            
Sbjct: 691 LQSVTRLRTGITQVKYIKAGDTVGYNRNGRLSGDGTIATVKIGYADGYSRRFGNGV---- 746

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 GK  IKG +VP +G I MDM M D+T    ++ G+ + + G ++  + +A A G
Sbjct: 747 ------GKMLIKGRLVPTVGDICMDMCMLDVTGI-DVKEGEEVLVMGEELSPETLAKAIG 799

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L  I  R  + Y
Sbjct: 800 TIPYEILTSISQRVRRVY 817


>gi|323353285|ref|ZP_08087818.1| alanine racemase [Streptococcus sanguinis VMC66]
 gi|322121231|gb|EFX92994.1| alanine racemase [Streptococcus sanguinis VMC66]
          Length = 369

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIDFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVTPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  S  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQSYPL--GTPVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|161511189|ref|NP_813012.2| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253570120|ref|ZP_04847529.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298385006|ref|ZP_06994565.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 1_1_14]
 gi|251840501|gb|EES68583.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298262150|gb|EFI05015.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 1_1_14]
          Length = 849

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK  AYG G  +IA  L    V    V   +
Sbjct: 490 LEVNLGAMVANLNHYRSMLRHPETKMICMVKAAAYGAGSYEIAKTLQEHHVDYLAVAVAD 549

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     + I ++        K +FD  L P + +   L    K        + P 
Sbjct: 550 EGSELRKAGITSSIIIMDPELTS-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 608

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG S+ E         ++       + SH   +D          Q+E F 
Sbjct: 609 HVKLDTGMHRLGFSVDEIPLLIRRLKSQNAVIPRSVFSHFVGSDSAQFDFFTRQQIELFE 668

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   F + R GI LYG +   N      +  T 
Sbjct: 669 KGSQELQEAFSHKILRHICNTAGIERFPGAQFDMVRLGIGLYGVSPIDNSIINNVS--TL 726

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     LTR S IA   IGYADG    L               
Sbjct: 727 KTTILQIRDVPGEDTVGYSRMGHLTRPSRIAAIPIGYADGLNRHLG----------RGNA 776

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++   GT  Y++L
Sbjct: 777 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDKAVIFGDDLPITTLSDKLGTIPYEVL 835

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 836 TSISNRVKRVY 846


>gi|329296350|ref|ZP_08253686.1| alanine racemase [Plautia stali symbiont]
          Length = 356

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/367 (26%), Positives = 157/367 (42%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +      I+  AL++N   +   + +AR  +VVK NAYG G  ++  +L       F + 
Sbjct: 2   SRPTGATINQQALRHNLAIVRQAAPHARVWSVVKANAYGHGIARVWQSLAE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  + D   +                       
Sbjct: 60  NMEEAILLREQGWKKLILLLEGFFHADDLTLIDRYRLTTSVHSNWQIQALAKAQLSAPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++A    H            +++H A A++P   V  +Q     
Sbjct: 120 VYLKINSGMNRLGFRPEQAQAAWHKLRALPSVGEMTLMAHFADAENPQGLVEPMQRV--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L  P  HF   RPGI LYG +   +     S  +Q V+T  
Sbjct: 177 EQAAEGLNCPRSLANSATTLWHPQAHFDWVRPGIILYGASPSGDWQDIASTGLQPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AGE V YG +        I + A GYADGYP                G  
Sbjct: 237 SEIIGVQQLSAGEGVGYGYRYHAAALQRIGIVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     LG I+MDM M D+       +G  ++++G ++K+D+VA A+GT  Y+L+ 
Sbjct: 286 VSVDGIRTQTLGAISMDMMMIDLEPCPQAGIGSRVELWGNEVKIDEVAKAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|281423583|ref|ZP_06254496.1| Mur ligase domain protein/alanine racemase [Prevotella oris F0302]
 gi|281402403|gb|EFB33234.1| Mur ligase domain protein/alanine racemase [Prevotella oris F0302]
          Length = 857

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 99/373 (26%), Positives = 158/373 (42%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+  N +   + +  + +   ++K +AYG G  +IA  L +  V    V   
Sbjct: 496 TTLEVNLNAVVKNLNHYRSFMKPHTKLVCMIKADAYGAGSVEIAKTLQDHRVDYLAVAVA 555

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 556 DEGVTLRKNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLDALVKEAEKEGITGFP 614

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG     +  +       +       + SH   AD D     ++ Q E 
Sbjct: 615 VHIKLDTGMHRLGFDPHKDMDELIRRLKRQNAIIPRSVFSHFVGADSDDFDTFSAQQFEL 674

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F+             I   + +S+GI   P+    + R G+ LYG   + NK     +  
Sbjct: 675 FKLGADKLQAAFDHKILFHMDNSAGIEHFPDRQMDMCRLGLGLYGINSRNNKIINNVS-- 732

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ I +  AGE + Y  +  L RDSLIA   IGYADG    LS            
Sbjct: 733 TLKTTILQIHQLPAGESIGYSRKTYLERDSLIAAIPIGYADGLDRRLSNRR--------- 783

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++ A  T  Y+
Sbjct: 784 -GYCLVNGQKAEYVGNICMDVAMIDVTDI-DCKEGDSVEIFGDHLPVTVLSDAIETIPYE 841

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 842 VLTGISNRVKRVY 854


>gi|226223505|ref|YP_002757612.1| alanine racemase [Listeria monocytogenes Clip81459]
 gi|254823845|ref|ZP_05228846.1| alanine racemase [Listeria monocytogenes FSL J1-194]
 gi|254931268|ref|ZP_05264627.1| alanine racemase [Listeria monocytogenes HPB2262]
 gi|254992344|ref|ZP_05274534.1| alanine racemase [Listeria monocytogenes FSL J2-064]
 gi|255522573|ref|ZP_05389810.1| alanine racemase [Listeria monocytogenes FSL J1-175]
 gi|300764095|ref|ZP_07074090.1| alanine racemase [Listeria monocytogenes FSL N1-017]
 gi|259710069|sp|C1L1F6|ALR_LISMC RecName: Full=Alanine racemase
 gi|225875967|emb|CAS04671.1| Putative alanine racemase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|293582818|gb|EFF94850.1| alanine racemase [Listeria monocytogenes HPB2262]
 gi|293593068|gb|EFG00829.1| alanine racemase [Listeria monocytogenes FSL J1-194]
 gi|300515085|gb|EFK42137.1| alanine racemase [Listeria monocytogenes FSL N1-017]
 gi|328475449|gb|EGF46215.1| alanine racemase [Listeria monocytogenes 220]
 gi|332311293|gb|EGJ24388.1| Alanine racemase [Listeria monocytogenes str. Scott A]
          Length = 368

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 154/378 (40%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++     
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+    EA             QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTDEARRIETTIAKDNQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGTDHGNTITADDAAHYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|46907119|ref|YP_013508.1| alanine racemase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47092094|ref|ZP_00229887.1| alanine racemase [Listeria monocytogenes str. 4b H7858]
 gi|67460119|sp|Q721S9|ALR_LISMF RecName: Full=Alanine racemase
 gi|46880386|gb|AAT03685.1| alanine racemase [Listeria monocytogenes serotype 4b str. F2365]
 gi|47019534|gb|EAL10274.1| alanine racemase [Listeria monocytogenes str. 4b H7858]
 gi|328467042|gb|EGF38137.1| alanine racemase [Listeria monocytogenes 1816]
          Length = 368

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 154/378 (40%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       + + ++     
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEELTLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+    EA             QL  I +H A AD   +     QL +
Sbjct: 123 RIHLKVDSGMGRLGIRTTDEARRIETTIAKDNQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++  
Sbjct: 183 FQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELKPA 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G + PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGTDHGNTITADDAAHYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLNERIPRKY 366


>gi|157691928|ref|YP_001486390.1| alanine racemase [Bacillus pumilus SAFR-032]
 gi|157680686|gb|ABV61830.1| alanine racemase [Bacillus pumilus SAFR-032]
          Length = 393

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 33/385 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++ A     ++  AVVK NAYG G  ++A     +G  +  V 
Sbjct: 6   REVWIEVNLDAIKRNIEAIQAHIPRKSKIMAVVKANAYGHGSVEVARQALESGATELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP----VISSVPQLTFYSKLMSCG 119
           S+EEG+ LR    +A I VL G  P           I         + +           
Sbjct: 66  SLEEGIVLRRAKIEAPILVL-GFTPLDCVKRAAAWRIDLSGLREDWIVEANEILAEEESQ 124

Query: 120 VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 + VDTG  RLG+   +E L         +  +   I +H + AD+P      +Q
Sbjct: 125 RRLGIHVNVDTGMGRLGVRTKEELLGVVEALEKSENLRWDGIFTHFSTADEPDPDFTLLQ 184

Query: 179 LERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
              F   +     +GI+     + +++  +  P +   + R GI LYG           +
Sbjct: 185 HSIFIDFLRFLKKQGIKLPTVHMNNTAAAIAFPEFSADMIRLGIGLYGLYPSQYIESLDA 244

Query: 230 HPMQTVVTAEARIILIRK-ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             ++  ++ +ARI  +++       VSYG      RD +IA   IGYADGY   LS    
Sbjct: 245 VQLEPALSLKARIAFVKEMVTEPRTVSYGATYVAKRDEVIATIPIGYADGYSRALSNR-- 302

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                    G    +G  +PI G++TMDMTM  + + +  + G+ + I+G     +I +D
Sbjct: 303 ---------GFMLFRGERMPIAGRVTMDMTMISLGE-MKAKQGEEVVIYGRQKGGEISVD 352

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A    T NY+++  +  R  +FY
Sbjct: 353 EIAEMLNTINYEVIATLSRRVPRFY 377


>gi|120437675|ref|YP_863361.1| alanine racemase [Gramella forsetii KT0803]
 gi|117579825|emb|CAL68294.1| alanine racemase [Gramella forsetii KT0803]
          Length = 369

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 23/369 (6%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L  L +N+  + + +   A+  +VVK +AYG    +IA  L   G   F V  VEE
Sbjct: 9   LEINLGNLAHNYRFLRSKTDKEAKFLSVVKAHAYGSDSVEIAKKLEELGTDYFAVAYVEE 68

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS--CGVSHPYA 125
           G++LR       I VL+   P   + I +  L P + S   L  +  L       ++P  
Sbjct: 69  GIRLRENGISKPILVLHP-QPSHFEEIIEHCLEPNLYSQKTLESFVSLAERLNQKNYPVH 127

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRT 184
           ++++TG NRLG    E         N    +++ + SHLA ++D         Q++ FR 
Sbjct: 128 IKLNTGLNRLGFDQSEIPRVFETIKNTNSIKIASVFSHLAASEDWQEREFTLSQIDLFRK 187

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +      +        + ++SG++  P   F + R GI LYG ++       ++ V   +
Sbjct: 188 MTWQLIENLDYEPLLHICNTSGVINYPKAAFSMVRTGIGLYGYSNDKTIDPHLKPVGKLK 247

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I  IRK   G  V Y    K  ++S IA   IG+ADG                     
Sbjct: 248 TIISQIRKLDPGASVGYNRAFKTEKESKIATLPIGHADGINRIYG----------KQKAG 297

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVALASGTTNYDLL 358
            F+ G   PI+G + MD+ M D+T     E GD + IF GP   +D  A A GT +Y+L+
Sbjct: 298 VFVNGKYAPIVGNVCMDIIMIDVTGI-DCEEGDEVIIFGGPQHPVD-FARAGGTISYELI 355

Query: 359 VRIGTRYAK 367
             I  R  +
Sbjct: 356 TGIQRRVTR 364


>gi|83748582|ref|ZP_00945602.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|207743279|ref|YP_002259671.1| alanine racemase protein [Ralstonia solanacearum IPO1609]
 gi|83724790|gb|EAP71948.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|206594676|emb|CAQ61603.1| alanine racemase protein [Ralstonia solanacearum IPO1609]
          Length = 375

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN       + ++R  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPIQAVIHGPALANNLQVARRHAPDSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  + +L G   P    ++    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPVLLLEGFFKPEDLALVEQYRLTTTVHCEEQLRMLELARLKG-PVS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +          +         + ++H + AD P       QL  F 
Sbjct: 120 VQLKINTGMSRLGFAPAAYRAAWERARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL++S+  L  P  H    RPG+ LYG +        +   + + +T +
Sbjct: 178 RATQGLPG-EASLSNSAATLWHPRAHRDWVRPGVILYGASPTGMAADIEGTGLMSAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I I+    G  + YG + ++ +   I + A GYADGYP    G    H         
Sbjct: 237 SELIAIQDLQPGATIGYGSRFQVEQPMRIGIVACGYADGYPRHAPGWGGNH-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+ +     VG  + ++G  + +D+VA A+GT  Y+L+ 
Sbjct: 290 VLVDGVRTRMVGRVSMDMITVDLAEVPGARVGTPVTLWGQGLPIDEVAHAAGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALALRVP 356


>gi|322377447|ref|ZP_08051938.1| alanine racemase [Streptococcus sp. M334]
 gi|321281647|gb|EFX58656.1| alanine racemase [Streptococcus sp. M334]
          Length = 367

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 159/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPEGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      RI +L         +  + ++   ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKRILILGVSEIEAVSLAKEYDITLTVAGLEWIQALLSSEEDLAGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEAEQAQDLLQQHGARIEGIFTHFATADEESDDYFNEQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  KG+      ++S+  L      F   R G ++YG       +N  + ++  +T
Sbjct: 185 KTILASMKGLPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEILNLPYDLKPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFV---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + +     G +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIHLPKLYPL--GTKVTLIGSNGGKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|194014730|ref|ZP_03053347.1| alanine racemase [Bacillus pumilus ATCC 7061]
 gi|194013756|gb|EDW23321.1| alanine racemase [Bacillus pumilus ATCC 7061]
          Length = 393

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 33/385 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  ++ A     ++  AVVK NAYG G  ++A     +G  +  V 
Sbjct: 6   REVWIEVNLDAIKRNIEAIQAHIPRKSKIMAVVKANAYGHGSVEVARQALESGATELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP----VISSVPQLTFYSKLMSCG 119
           S+EEG+ LR    +A I VL G  P           I         + +           
Sbjct: 66  SLEEGIVLRRAKIEAPILVL-GFTPLDCVKRAAAWRIDLSGLREDWIVEANEILAEEESQ 124

Query: 120 VSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 + VDTG  RLG+   +E L         +  +   I +H + AD+P      +Q
Sbjct: 125 RRLGIHVNVDTGMGRLGVRTKEELLGVVEALEKSENLRWDGIFTHFSTADEPDPDFTQLQ 184

Query: 179 LERFRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
              F   +     +GI+     + +++  ++ P +   + R GI LYG           +
Sbjct: 185 HSIFIDFLRFLKKRGIKLPTVHMNNTAAAIVFPEFSADMIRLGIGLYGLYPSQYIESLDA 244

Query: 230 HPMQTVVTAEARIILIRK-ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             ++  ++ +ARI  +++       VSYG       D +IA   IGYADGY   LS    
Sbjct: 245 VQLEPALSLKARIAFVKEMVTKPRTVSYGATYVAKPDEVIATIPIGYADGYSRALSNR-- 302

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                    G    +G  +PI G++TMDMTM  + + +  + G+ + I+G     +I +D
Sbjct: 303 ---------GFMLFRGKRMPIAGRVTMDMTMISLGE-MKAKQGEEVVIYGRQKGGEISVD 352

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A    T NY+++  +  R  +FY
Sbjct: 353 EIAEMLNTINYEVIATLSRRVPRFY 377


>gi|71904184|ref|YP_280987.1| alanine racemase [Streptococcus pyogenes MGAS6180]
 gi|123639333|sp|Q48RM8|ALR_STRPM RecName: Full=Alanine racemase
 gi|71803279|gb|AAX72632.1| alanine racemase [Streptococcus pyogenes MGAS6180]
          Length = 366

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 164/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   +A++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKAVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     +  +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLPKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|281422046|ref|ZP_06253045.1| alanine racemase [Prevotella copri DSM 18205]
 gi|281403835|gb|EFB34515.1| alanine racemase [Prevotella copri DSM 18205]
          Length = 389

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 91/388 (23%), Positives = 156/388 (40%), Gaps = 34/388 (8%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
                  ++IDL  +K N+     +L  +    AV+K +AYG G   IA  L   G + F
Sbjct: 7   QMERRSWIEIDLDQIKQNYFIYKNSLQSDVEIMAVIKADAYGHGDAHIARWLSEQGCRLF 66

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V++++E V LR    +  I +L    P   K +     + +  ++    +   L   G 
Sbjct: 67  AVSNIDEAVGLRNAGIKGEILILGYTSPKYAKTLS---YLDLSQAIVSEEYAEALSQAGQ 123

Query: 121 SHPYALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNS 176
                  +DTG NR+GL                    +  + +HL  AD   + +     
Sbjct: 124 RVKCQFAIDTGMNRIGLDGDNTSSCEEIIRKYSDSLIVEGLFTHLCVADTDTEEAKKFTY 183

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQ----LTRPGISLYGGTDKIN 227
            Q+ +F+ +      +         ++     L  N  F+    + R GI LYG    + 
Sbjct: 184 GQIRKFKAVADAVSDLKLPFVHCCNSAGGLYYLNNNSEFEGVGKIVRLGIVLYGLKPDVE 243

Query: 228 KSHPM--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
              P   +  +T ++ + +++    GE + YG    + ++  +A    GYADG    LS 
Sbjct: 244 NQLPDGVKPAMTWKSVVSMVKNVHPGETIGYGRTFTVEKEMKVATVTTGYADGLNRLLSN 303

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----I 341
                       G   I GY  PI+G+I MD T+ D+T+   +++G  + I G       
Sbjct: 304 -----------KGFVMINGYKAPIVGRICMDQTLVDVTEIPDVKMGTEVVIIGKSGDLIY 352

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
             DD+A   GT  Y+++  I  R  +FY
Sbjct: 353 TSDDMAQDLGTIGYEVICNITKRVQRFY 380


>gi|315281568|ref|ZP_07870169.1| alanine racemase [Listeria marthii FSL S4-120]
 gi|313614777|gb|EFR88320.1| alanine racemase [Listeria marthii FSL S4-120]
          Length = 368

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 151/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N       L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQKQLPENVALWAVVKANAYGHGIIEVAKTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    Q    ++ G    ++  +   N I   S       +   +      
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRQEDANLAAKNRI---SLTVFREDWLDNLGLEAPL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L+VD+G  RLG+   +EA          K  QL  I +H A AD   +     QL +
Sbjct: 123 QIHLKVDSGMGRLGIRSAEEARHIESTIAENKQLQLEGIYTHFATADQLETSYFEQQLAK 182

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA- 238
           F T+++  K     +   +S+  LL    +F   R GIS+YG T        +   +   
Sbjct: 183 FTTILTSLKERPIFVHTANSAASLLQSQMNFDAIRFGISMYGLTPSKEIKTSLPFELRPA 242

Query: 239 ---EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                 ++L+++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 243 LALYTEMVLVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G   PI+G++ MD T+  +      + G  + I G D    I  DD A    
Sbjct: 294 ---HVLVDGEHAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGTDHGNTITADDAAEYLD 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 349 TINYEVTCLLTERIPRKY 366


>gi|29341418|gb|AAO79206.1| alanine racemase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 773

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK  AYG G  +IA  L    V    V   +
Sbjct: 414 LEVNLGAMVANLNHYRSMLRHPETKMICMVKAAAYGAGSYEIAKTLQEHHVDYLAVAVAD 473

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     + I ++        K +FD  L P + +   L    K        + P 
Sbjct: 474 EGSELRKAGITSSIIIMDPELTS-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 532

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG S+ E         ++       + SH   +D          Q+E F 
Sbjct: 533 HVKLDTGMHRLGFSVDEIPLLIRRLKSQNAVIPRSVFSHFVGSDSAQFDFFTRQQIELFE 592

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   F + R GI LYG +   N      +  T 
Sbjct: 593 KGSQELQEAFSHKILRHICNTAGIERFPGAQFDMVRLGIGLYGVSPIDNSIINNVS--TL 650

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     LTR S IA   IGYADG    L               
Sbjct: 651 KTTILQIRDVPGEDTVGYSRMGHLTRPSRIAAIPIGYADGLNRHLG----------RGNA 700

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++   GT  Y++L
Sbjct: 701 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDKAVIFGDDLPITTLSDKLGTIPYEVL 759

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 760 TSISNRVKRVY 770


>gi|291529405|emb|CBK94991.1| alanine racemase [Eubacterium rectale M104/1]
          Length = 376

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 101/385 (26%), Positives = 168/385 (43%), Gaps = 28/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M  N  +R  IDL A+  N  SM N L      AAVVK + YG G E ++  L     + 
Sbjct: 1   MAINR-IRADIDLDAILYNMESMHNKLKPGTMMAAVVKADGYGHGAEAVSEVLEPLPYLW 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +  E ++L     +  I +L    P Q + I D ++ P + +       S++   
Sbjct: 60  GYAVATSNEAMELIAAGRKKPILILGLSFPEQFEEIVDNDVRPAVCTYETAKELSRIAVA 119

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G  + +E+ D            +  I +H A AD+ S     
Sbjct: 120 KNKTCKIHIKIDTGMCRIGFQVTEESADIIAQIAKLPNIMIEGIFTHFARADELSKEPAF 179

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q + F+ +I+  +  E        ++S+GI+  P  +  + R GI+LYG          
Sbjct: 180 EQFDLFKRMIALVEAREVEIPIKHCSNSAGIVEIPECNMDMVRAGITLYGLWPSEEVDKS 239

Query: 232 ---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V++  +R+  +++   G  +SYGG   +     IA   +GY DGY   LS    
Sbjct: 240 KISLKPVMSLHSRVAYVKELEPGRHISYGGTFTVEHPMRIATVPVGYGDGYSRGLSN--- 296

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   IKG   PI G++ MD  M D+TD   +++GD + + G D    I ++
Sbjct: 297 --------KGWVLIKGKKAPICGRVCMDQFMVDVTDIPDVKIGDAVTLLGKDGDETITME 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            +   SG  NY+    I  R  + Y
Sbjct: 349 QLGELSGRFNYEFACLITPRVPRIY 373


>gi|261392126|emb|CAX49626.1| alanine racemase [Neisseria meningitidis 8013]
          Length = 352

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 88/365 (24%), Positives = 158/365 (43%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AVVK +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYQILKEMHGG-KLLAVVKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +              +     +   
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKTVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PSNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|329117453|ref|ZP_08246170.1| alanine racemase [Streptococcus parauberis NCFD 2020]
 gi|326907858|gb|EGE54772.1| alanine racemase [Streptococcus parauberis NCFD 2020]
          Length = 367

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K++L A+K+N   + +      +  AVVK NAYG G  ++A A  +  +
Sbjct: 1   MISSLHRPTVAKVNLNAIKDNIKQVQSHIPTGKKAYAVVKANAYGHGAVEVAKA-IDPDI 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  I   Q  +  + N+   +SS+  L    +  +
Sbjct: 60  DAYCVSNLDEALELRQAGITKEILILGIILADQLALAIENNVTLTVSSLEWLEDAKQSGA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G+      +    +   +   +  + +H A AD+ ++     
Sbjct: 120 DLSKLHVHLKVDSGMGRIGVRSLSEANALIAALLAEDSHIDGVFTHFATADEANADKFKQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+       A +   +S+  L      F   R GI +YG       ++  +P+
Sbjct: 180 QLHFFTELVESLDHKPALVHASNSATSLWHSETIFNAVRLGIVIYGLNPSGTDLDLPYPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ E R++ ++   AG+ V YG   +     ++    IGYADG+   + G       
Sbjct: 240 TAALSLETRLVHVKTINAGDTVGYGATYQAKEAEVVGTIPIGYADGWTRDMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G+++MD     +       +G  + + G D    I   DVA 
Sbjct: 295 -------VLVDGQACEIIGRVSMDQVTIRLPKVYP--IGTKVTLIGQDGSSVISATDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCVLSDRVPRKY 366


>gi|328544029|ref|YP_004304138.1| Alanine racemase, biosynthetic [polymorphum gilvum SL003B-26A1]
 gi|326413773|gb|ADZ70836.1| Alanine racemase, biosynthetic [Polymorphum gilvum SL003B-26A1]
          Length = 415

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 144/365 (39%), Positives = 201/365 (55%), Gaps = 10/365 (2%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +D  A+ +NW ++   L   AR AA VK +AYG G      AL  +G   FFV    E
Sbjct: 49  LTVDTAAIADNWRALAGQLGPGARCAATVKADAYGCGIPATVRALAASGCDTFFVALPAE 108

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYAL 126
           G+ +R   P A I+VL G+ PG      +  L PV+ S+P+L  ++    S  V    A+
Sbjct: 109 GIAVREAAPGATIYVLDGLFPGTAPAYAEARLRPVLGSLPELEEWALFCRSRKVRLEAAV 168

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG NRLGL+ QEA     +        L+L+ISHLAC  +P   +N  QLERFRTL 
Sbjct: 169 HVDTGMNRLGLTEQEAERLAGDRDLLDSFALALVISHLACGAEPGHPLNRQQLERFRTLS 228

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
            H+     SLA+S+GI LG +YHF L RPGI+LYGG    +  +PM+ V   EARI+ +R
Sbjct: 229 GHFPDAVRSLANSAGIFLGADYHFDLVRPGIALYGGKALDSFDNPMRPVARVEARILQLR 288

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YG  + + RD+ +AV A GYADG      G D         GG G+I G+ 
Sbjct: 289 TVRAGEGVGYGLAQTVRRDTRLAVVAAGYADGLLRRAGGSDDR------PGGHGWIVGHR 342

Query: 307 VPILGKITMDMTMFDITDSLSI--EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           VP+ G+I+MDM   D+TD  +     G  +++ GP +   ++A  + T +Y+ L  +G R
Sbjct: 343 VPVFGRISMDMQALDVTDVPAALLRRGAMVELIGPHVAASELAAVADTIDYEYLTALGRR 402

Query: 365 YAKFY 369
           + + Y
Sbjct: 403 FHRRY 407


>gi|228477128|ref|ZP_04061766.1| alanine racemase [Streptococcus salivarius SK126]
 gi|228251147|gb|EEK10318.1| alanine racemase [Streptococcus salivarius SK126]
          Length = 367

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+  N   + +      +T AVVK NAYG G  ++A  L    V
Sbjct: 1   MISSLHRPTLAKVDLSAISENIEQVVSHIPKKVQTFAVVKANAYGHGAVEVAKHLSKQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  + P +  +    N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEALELRQAGLEQPILILGVVLPDEVPLAIQENITLTVASLEWLEMAKDQGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+G+  Q   D            +  I +H A AD+        
Sbjct: 120 DLTGLTCHIKIDSGMGRIGVRSQGDADSLIAGLKALGADVEGIFTHFATADEADDSKFKR 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+++       +   +S+  +      F   R G+ +YG       ++  + +
Sbjct: 180 QLAFFTDLVNNLVDRPRLVHASNSATSIWHAETVFNAVRLGVVIYGLNPSGSVLDLPYNI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +  E  ++ ++   +G+ V YG     T D +I    IGYADG+   L G       
Sbjct: 240 RPALRLETALVHVKTLPSGQDVGYGATYTTTADEVIGTIPIGYADGWTRDLQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G +    I   +VA 
Sbjct: 294 ------HVIVDGQLCPIVGRVSMDQITVRLPKVYPL--GTPVTLMGENGGASITATEVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRVPRSY 366


>gi|218129279|ref|ZP_03458083.1| hypothetical protein BACEGG_00856 [Bacteroides eggerthii DSM 20697]
 gi|317475248|ref|ZP_07934515.1| alanine racemase [Bacteroides eggerthii 1_2_48FAA]
 gi|217988657|gb|EEC54977.1| hypothetical protein BACEGG_00856 [Bacteroides eggerthii DSM 20697]
 gi|316908701|gb|EFV30388.1| alanine racemase [Bacteroides eggerthii 1_2_48FAA]
          Length = 828

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 470 LEVNLGAMIANLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQEHHVDYLAVAVADE 529

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A + ++        K +FD  L P + S   L    K        + P  
Sbjct: 530 GSDLRKAGITASVIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 588

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG + ++          +       + SH   +D          Q+E F  
Sbjct: 589 VKLDTGMHRLGFAPEDMPRLIERLKGQNAVIPRSVFSHFVGSDAPQFDAFTRKQIETFEK 648

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +S+GI   P   F + R GI LYG +   N    M  V T +
Sbjct: 649 ASMLLQEAFPYKILRHICNSAGIERFPGAQFDMVRLGIGLYGISPIDN--SIMNNVSTLK 706

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L                
Sbjct: 707 TTILQIRDVPEEDTVGYSRKGHLVRPSRIAAIPIGYADGLNRHLGNGR----------AY 756

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 757 CLVNGQRAPYVGNICMDVCMIDVTDI-DCKEGDSVEIFGDHLPITVLSDVLETIPYEVLT 815

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 816 SVSTRVKRIY 825


>gi|187736333|ref|YP_001878445.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426385|gb|ACD05664.1| alanine racemase [Akkermansia muciniphila ATCC BAA-835]
          Length = 367

 Score =  267 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 155/371 (41%), Gaps = 17/371 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +ID  AL++N + +  +  + R  A+VK  AYG G E +  AL       F V +
Sbjct: 7   PRAWAQIDTNALRHNLNVVRRVMPDHRLMAIVKAEAYGHGLEGVVKALDGEDCAFFGVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHP 123
           V E  ++R    +   F+L     G+ + I        +SS+ +   ++      G +  
Sbjct: 67  VAEACRVRDAGAKTCPFILGPCFEGEREEIVQNGWRAALSSMEEAEHFNSLGALYGKTVH 126

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L VDTG  R G    E    T          L  + SHL+ A D  S     Q+  F 
Sbjct: 127 VHLGVDTGMGRSGFLPSELHGLTDKLKQFSYLDLEGVFSHLSAASDDIS-FTHGQISGFT 185

Query: 184 TLISH----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTA 238
             ++     ++     L SS+ +         + R G  LYG +   +  +  ++  +T 
Sbjct: 186 EAVNELSQGHRYKFRHLCSSAAVFNYKVPCANMARLGRILYGYSPMPSPYNKELRPTMTL 245

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +RI LIR       VSY         + +A   IGYADGY   LS            G 
Sbjct: 246 YSRITLIRTLPGNHGVSYNHCYITKGSTKVATIGIGYADGYLQYLSNQ----------GA 295

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           + +I G   P+LG++TMD  M D+T    +E GD ++I GP++  +++   + T   ++L
Sbjct: 296 RVYINGQYCPVLGRVTMDQIMVDVTYMDHVETGDLVEIMGPNVSWEELTRRANTIPSNVL 355

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 356 TSISARVPRIY 366


>gi|169829733|ref|YP_001699891.1| alanine racemase [Lysinibacillus sphaericus C3-41]
 gi|168994221|gb|ACA41761.1| Alanine racemase [Lysinibacillus sphaericus C3-41]
          Length = 389

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 86/387 (22%), Positives = 155/387 (40%), Gaps = 33/387 (8%)

Query: 1   MHSN---EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +       +  IDL A++ N  ++   +  N +  AVVK NAYG G   +A A   AG
Sbjct: 17  MKTQQYFRPTKAMIDLQAIQQNIKNLKKFIRPNVQIIAVVKANAYGHGDVAVAQAALEAG 76

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V + +E + +R    +    ++ G  P     I     I +     +    +  +
Sbjct: 77  ATILAVATPDEALHIR-AHFEEPDILILGASPVSFAPIAAQQRIMLTVYASEWVQQAAPL 135

Query: 117 SCG--VSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                      ++VD+G  R+G+   Q+ L       +    +L+ I +H A AD+  + 
Sbjct: 136 LAKEAEPLQLHIKVDSGMGRIGIRSEQDLLALYQTIESIDNVELNGIFTHFATADEKDTT 195

Query: 174 VNSVQLERFRTLISHYKGIEASLASS---SGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
               Q++ F + ++        + +S   + ++   N  +   R GIS+YG +       
Sbjct: 196 YFDEQVQFFESCLAVMPKKPLLVHASNTAASLVKDSNLQYDAVRYGISMYGLSPSSYVES 255

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                +Q   + E+ ++ +++   GE V YG       +  I    IGYADG    L G 
Sbjct: 256 ILPFALQPAFSLESELVHVKEIKKGESVGYGATYVAPSNMWIGTIPIGYADGVIRKLGGQ 315

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  I G  +PI+G+I MD  M  +  +    +G+ + + G      I 
Sbjct: 316 ------------EVLIDGQRMPIVGRICMDQCMVALPKAY--AIGEKVTLIGQQGQNRIS 361

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           +D+ A    T NY++   I  R  + Y
Sbjct: 362 IDEWATKLETINYEIPCIITARVPRIY 388


>gi|228995614|ref|ZP_04155280.1| Alanine racemase [Bacillus mycoides Rock3-17]
 gi|228764186|gb|EEM13067.1| Alanine racemase [Bacillus mycoides Rock3-17]
          Length = 397

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG 56
           M  + F R   ++++L A+ NN   +  +   +    AVVK NAYG     +A     AG
Sbjct: 9   MGKSSFYRDTWVEVNLDAIYNNVTHIKEIIPESVEIFAVVKANAYGHDYVLVARTALEAG 68

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I V+    P    +  + ++   +     +    ++ 
Sbjct: 69  ATRLAVAFLDEALVLRRAGITAPILVIGPSPPRDVNVAAENDVALTVFQKEWVEEAVEIW 128

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +  +    +L  I +H A AD+  +   
Sbjct: 129 DSPFPMKFHINFDSGMGRIGIRERKELKEFLRSLEDAPFLELEGIYTHFATADEVETSYF 188

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  +      F   R GI++YG +  +    
Sbjct: 189 DKQYNTFLEQLSWLKAFGVNPTFIHTANSAATMRFDGITFNAVRIGIAMYGLSPSVEIRP 248

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++    +  I++ + G+ +SY    +   +  IA   IGYADG+   L G 
Sbjct: 249 YLPIKLEPALSLHTTVAHIKRVIKGDRISYNVTYRTKTEEWIATVPIGYADGWLRRLQGF 308

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  ++G  VPI+G+ITMD  M  +     + +G  + + G      I 
Sbjct: 309 ------------EVLVQGKRVPIVGRITMDQCMLHLP--CEVPLGTKVTLIGQQGDEYIS 354

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  S T NY+++  I  R  + +
Sbjct: 355 ATEVAEYSNTINYEIIATISFRVPRVF 381


>gi|325122726|gb|ADY82249.1| alanine racemase 1, biosynthetic [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 356

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRNALQYNLNRVKQLATNSKIVSMVKANAYGHGIKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSC--GVSHPYALQ 127
           +R    Q  + ++ G+    E  I        VI    Q  +  K             ++
Sbjct: 66  IRELGFQQPVTLIEGVFSEDEMPIAIKQKFECVIHHQQQFEWLIKHKQAYINQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKDPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               + AS  +S+ I   P  HF   RPGI LYG +   ++      ++ V+T  A +I 
Sbjct: 183 ACDPVLASCCNSAAIYKWPELHFDYVRPGIMLYGASPFADQTVHDLDLKPVMTFSAEVIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +      E V YG      +   IA+ +IGY DGYP                     I  
Sbjct: 243 LNHIQTNEHVGYGSTFCAKQAMDIAIVSIGYGDGYPRAY-----------IKQNYVAIDK 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   D+T  + +++G  ++++GP   +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLCAVVGRVSMDMIAIDVTG-MQVKLGTPVELWGPHRLVDDVADANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PTR 353


>gi|229827601|ref|ZP_04453670.1| hypothetical protein GCWU000182_02990 [Abiotrophia defectiva ATCC
           49176]
 gi|229788239|gb|EEP24353.1| hypothetical protein GCWU000182_02990 [Abiotrophia defectiva ATCC
           49176]
          Length = 401

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 29/386 (7%)

Query: 1   MHSN-EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S  +    +I+L A++ N+  +    G N + A +VK +AYG G  K+   L   G  
Sbjct: 13  MKSTLKRTWAEINLDAIEYNYKKIKEHIGENVKFAGIVKADAYGHGSVKVGAKLQELGAD 72

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD-TNLIPVISSVPQLTFYSKLMS 117
              V+S++E ++LR       I +L      Q   +        V      L + ++ + 
Sbjct: 73  YLAVSSIDEAMELRFNGITMPILILGHTPREQVDRLICFNITQAVTCEAKALEYSAEAVK 132

Query: 118 CGVSHPYALQVDTGFNRLGL-----SLQEALDFTHNSFNKKLGQLSLIISHLACADDP-- 170
           C  +    ++VDTG +RLG        +  ++   N           I +H A +D+   
Sbjct: 133 CKGTLKIHIKVDTGMSRLGYLCEGEHFEHGIEGIVNVCKLSNLDAEGIFTHFAVSDEDGE 192

Query: 171 -SSHVNSVQLERFRTLISHYKG------IEASLASSSGILLGPNYHFQLTRPGISLYGGT 223
                   QLE F+ +I+  +       +    A++   +  P+ +  + RPG+ LYG  
Sbjct: 193 ECKEYTDHQLELFKAVITEVEKKSGKAFLLHHCANTGATVNRPDSYMDMVRPGLLLYG-Y 251

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
            +  K+  ++ V++ +  +  I+    G  +SYGG    T  + + V   GYADG+   L
Sbjct: 252 GEFAKALGLKPVMSMKTTVSTIKVYPKGTKISYGGIYTTTGKTRMGVVPYGYADGFMRCL 311

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL 343
           S   S  +               V   G+I MDM M D+TD  SI+VG  I+IFG +  +
Sbjct: 312 SNKYSFMTEEGA-----------VRQRGRICMDMCMIDLTDKFSIDVGSEIEIFGENNPI 360

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           + +A  +GT  Y+L+  +  R  + Y
Sbjct: 361 EAMAEMAGTIPYELVCAVSKRVHRIY 386


>gi|304385540|ref|ZP_07367884.1| alanine racemase [Pediococcus acidilactici DSM 20284]
 gi|304328044|gb|EFL95266.1| alanine racemase [Pediococcus acidilactici DSM 20284]
          Length = 375

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 88/377 (23%), Positives = 148/377 (39%), Gaps = 25/377 (6%)

Query: 4   NEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   RL +D  A++ N    +  L   +   AV+K +AYG G   +A     AG   F V
Sbjct: 6   HRASRLVVDAAAIRQNVKKEIERLDHQSELFAVIKADAYGHGLIPVARYTEQAGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR       I VL   +     +  + N+   +  V  LT  +  ++     
Sbjct: 66  AILDEALTLREAGFAEPILVLGITNVKWAALAAEKNVSLTVGDVEWLTKAAPQLTAEHPL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ-LSLIISHLACADDPSSHVNSVQLER 181
              L +DTG  R+G    + L+       K        + +H A AD+      ++Q++R
Sbjct: 126 KVHLALDTGMGRIGFQESDGLNQAAKLLIKDPRFVFEGVFTHFATADEKDPTYFNLQVDR 185

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F  L+         +   +++  L     +  L R G+ +YG       +   + +Q  +
Sbjct: 186 FHKLVDTLPEKPRYVHVSNTATSLWHAACNGNLIRFGVGIYGMNPSGTVLEPPYDLQPAM 245

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+R+   +    G  VSYG      +D  I    IGYADGYP  L G           
Sbjct: 246 TLESRLSFSKLLKKGRSVSYGATYTAEQDEWIGTIPIGYADGYPRCLQGF---------- 295

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
                + G+   I+G++ MD  M  +        G  + +     G  I + D+A   GT
Sbjct: 296 --HVLVDGHFCEIVGRVCMDQLMIRLPHEYPA--GTPVILAGQSQGKSISMTDIADYVGT 351

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++      R  + Y
Sbjct: 352 INYEITCGFTERLPRVY 368


>gi|312866452|ref|ZP_07726670.1| alanine racemase [Streptococcus downei F0415]
 gi|311098146|gb|EFQ56372.1| alanine racemase [Streptococcus downei F0415]
          Length = 367

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/381 (24%), Positives = 163/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+ +N   +      + +T AVVK NAYG G   +A       V
Sbjct: 1   MISSLHRPTLAKVDLSAISSNIKQIQDHVPQSVKTFAVVKANAYGHGAVAVASHTQRL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++EG++LR    +  I VL  + PG+  ++ D  L   I+S+  L        
Sbjct: 60  DGFCVSNIDEGIELRQAGIRKPILVLGVVLPGEVPLVRDYRLTLTIASLEWLELAQAKPL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
              +    + VD+G  R+G+      +       +   Q+  I +H A AD+        
Sbjct: 120 DLSNLLVHIAVDSGMGRIGVRSLAEANDLIAGLRQAGCQVKGIFTHFATADEADDRKFQE 179

Query: 178 QLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPM 232
           QL  F+ L++   Y       ++S+  L      F   R G+ +YG      +    + +
Sbjct: 180 QLAFFKELVAGLDYCPELVHASNSATSLWHSEGIFNALRLGLVIYGLNPSGQELSLPYKI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E  ++ ++K  AG  V YG     +++  I    +GYADG+   + G D     
Sbjct: 240 KPALSLETALVHVKKVPAGADVGYGATYTSSQEEWIGTLPLGYADGWTRDMQGFD----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G   PI+G+++MD     +  S  +  G  + + G +    I   DVA 
Sbjct: 295 -------VLVAGQRCPIVGRVSMDQITIRLPQSYPL--GTKVTLIGKNGDQLISATDVAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 QRGTINYEVLCLLSDRVPREY 366


>gi|260867595|ref|YP_003233997.1| alanine racemase 2, PLP-binding [Escherichia coli O111:H- str.
           11128]
 gi|257763951|dbj|BAI35446.1| alanine racemase 2, PLP-binding [Escherichia coli O111:H- str.
           11128]
 gi|323179296|gb|EFZ64866.1| alanine racemase [Escherichia coli 1180]
          Length = 356

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
             ++       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQVAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|262408369|ref|ZP_06084916.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294645830|ref|ZP_06723513.1| alanine racemase [Bacteroides ovatus SD CC 2a]
 gi|294808184|ref|ZP_06766950.1| alanine racemase [Bacteroides xylanisolvens SD CC 1b]
 gi|262353921|gb|EEZ03014.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638843|gb|EFF57178.1| alanine racemase [Bacteroides ovatus SD CC 2a]
 gi|294444593|gb|EFG13294.1| alanine racemase [Bacteroides xylanisolvens SD CC 1b]
          Length = 846

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 150/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 487 LEVNLGAMVANLNHYRSMLRHPETKVICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 546

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 547 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 605

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 606 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSPQFDAFTRRQIELFE 665

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P+  F + R GI LYG +   N    +  V T 
Sbjct: 666 KGSQELQAAFSHKILRHICNTAGIERFPDAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 723

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 724 KTTILQIRDVPQEDTVGYSRMGHLARPSRIAAIPIGYADGLNRHLG----------RGNA 773

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 774 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 832

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 833 TSISTRVKRVY 843


>gi|237717941|ref|ZP_04548422.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|299146913|ref|ZP_07039981.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 3_1_23]
 gi|229452743|gb|EEO58534.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298517404|gb|EFI41285.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. 3_1_23]
          Length = 820

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 150/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 461 LEVNLGAMVANLNHYRSMLRHPETKVICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 520

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 521 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 579

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 580 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSPQFDAFTRRQIELFE 639

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P+  F + R GI LYG +   N    +  V T 
Sbjct: 640 KGSQELQAAFSHKILRHICNTAGIERFPDAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 697

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 698 KTTILQIRDVPQEDTVGYSRMGHLARPSRIAAIPIGYADGLNRHLG----------RGNA 747

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 748 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 806

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 807 TSISTRVKRVY 817


>gi|237714254|ref|ZP_04544735.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229445746|gb|EEO51537.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 830

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 150/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 471 LEVNLGAMVANLNHYRSMLRHPETKVICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 530

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 531 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 589

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 590 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSPQFDAFTRRQIELFE 649

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P+  F + R GI LYG +   N    +  V T 
Sbjct: 650 KGSQELQAAFSHKILRHICNTAGIERFPDAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 707

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 708 KTTILQIRDVPQEDTVGYSRMGHLARPSRIAAIPIGYADGLNRHLG----------RGNA 757

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 758 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 816

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 817 TSISTRVKRVY 827


>gi|292571687|gb|ADE29602.1| Alanine racemase [Rickettsia prowazekii Rp22]
          Length = 404

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 128/408 (31%), Positives = 187/408 (45%), Gaps = 58/408 (14%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+L+A+KNN+  +  +   A   AVVK N YGLG  +IA AL     Q FFV + EEG
Sbjct: 6   LEINLSAIKNNYRLLQDICKTALVGAVVKANGYGLGAMQIAKALIKENCQYFFVATSEEG 65

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           + LR        I VL G+       +   NL PV++++ Q+  + K  +  G   P  L
Sbjct: 66  INLRKVLNNDITILVLNGVFTHDALELIQYNLTPVLNNLSQIEIWQKFSNLKGKILPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NR GL+  E     ++    K   L  IISHLA +++  +  N +QL RF+  +
Sbjct: 126 HFNTGLNRFGLNSDEIEQLINDRDLLKGLDLQYIISHLAASEETGNPYNLIQLNRFKVYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--------------- 231
            ++  ++AS A+S GI LG +YHF L RPG +LYG    I  S                 
Sbjct: 186 EYFPNVKASFANSGGIFLGQDYHFDLARPGAALYGLNSLIEVSSNLSYTEEFESNTAALT 245

Query: 232 ----------------------------MQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
                                       +Q  VT +A II ++       + Y       
Sbjct: 246 TTACINKCPDVSVRLTPKLPLKGSHTVRLQNPVTLKAPIIDLQNLTLDSHIGYNMTFTTK 305

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
           RDS+IA   +GYADG+    S             G+ FI    VPI+G+++MD+   D+T
Sbjct: 306 RDSVIATLPLGYADGFSRNFSSQ-----------GEVFINSCSVPIVGRVSMDLINIDVT 354

Query: 324 DSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D    EV  G   +I G     D +A   GT  Y++L  +G+RY + Y
Sbjct: 355 DLPPSEVFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTSLGSRYKRKY 402


>gi|15603973|ref|NP_220488.1| alanine racemase [Rickettsia prowazekii str. Madrid E]
 gi|6647413|sp|Q9ZE52|ALR_RICPR RecName: Full=Alanine racemase
 gi|3860664|emb|CAA14565.1| ALANINE RACEMASE (alr) [Rickettsia prowazekii]
          Length = 404

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 128/408 (31%), Positives = 187/408 (45%), Gaps = 58/408 (14%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+L+A+KNN+  +  +   A   AVVK N YGLG  +IA AL     Q FFV + EEG
Sbjct: 6   LEINLSAIKNNYRLLQDICKTALVGAVVKANGYGLGAMQIAKALIKENCQYFFVATSEEG 65

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           + LR        I VL G+       +   NL PV++++ Q+  + K  +  G   P  L
Sbjct: 66  INLRKVLNNDITILVLNGVFTHDALELIQYNLTPVLNNLSQIEIWQKFSNLKGKILPCYL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NR GL+  E     ++    K   L  IISHLA +++  +  N +QL RF+  +
Sbjct: 126 HFNTGLNRFGLNSDEIEQLINDRDLLKGLDLQYIISHLAASEETGNPYNLIQLNRFKVYL 185

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--------------- 231
            ++  ++AS A+S GI LG +YHF L RPG +LYG    I  S                 
Sbjct: 186 EYFPNVKASFANSGGIFLGQDYHFDLARPGAALYGLNSLIEVSSNLSYTEEFESNTAALT 245

Query: 232 ----------------------------MQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
                                       +Q  VT +A II ++       + Y       
Sbjct: 246 TTACINKCPDVSVRLTPKLPLKGSYTVRLQNPVTLKAPIIDLQNLTLDSHIGYNMTFTTK 305

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
           RDS+IA   +GYADG+    S             G+ FI    VPI+G+++MD+   D+T
Sbjct: 306 RDSVIATLPLGYADGFSRNFSSQ-----------GEVFINSCSVPIVGRVSMDLINIDVT 354

Query: 324 DSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D    EV  G   +I G     D +A   GT  Y++L  +G+RY + Y
Sbjct: 355 DLPPSEVFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTSLGSRYKRKY 402


>gi|153807458|ref|ZP_01960126.1| hypothetical protein BACCAC_01738 [Bacteroides caccae ATCC 43185]
 gi|149129820|gb|EDM21032.1| hypothetical protein BACCAC_01738 [Bacteroides caccae ATCC 43185]
          Length = 830

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 97/371 (26%), Positives = 147/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   A+      +   +VK +AYG G  +IA  L    V    V   +
Sbjct: 471 LEVNLGAMVENLNHYRAMLRHPETKVICMVKASAYGAGSYEIAKTLQEHHVDYLAVAVAD 530

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     + I ++        K +FD  L P + +   L    K        + P 
Sbjct: 531 EGSELRKAGITSSIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 589

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG  + E          +       + SH   +D          Q+E F 
Sbjct: 590 HVKLDTGMHRLGFGIDEIPLLIRRLKAQNAVIARSVFSHFVGSDSPQFDSFTRQQIELFE 649

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   F + R GI LYG +   N    +  V T 
Sbjct: 650 KGSQELQAAFSHKILRHICNTAGIERFPGAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 707

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR   A + V Y  +  L R S IA   IGYADG    L               
Sbjct: 708 KTTILQIRDVPAEDTVGYSRKGHLERPSRIAAIPIGYADGLNRHLG----------RGNA 757

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 758 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 816

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 817 TSISTRVKRVY 827


>gi|229003241|ref|ZP_04161078.1| Alanine racemase [Bacillus mycoides Rock1-4]
 gi|228758011|gb|EEM07219.1| Alanine racemase [Bacillus mycoides Rock1-4]
          Length = 389

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/387 (21%), Positives = 156/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG 56
           M  + F R   ++++L A+ NN   +  +   +    AVVK NAYG     +A     AG
Sbjct: 1   MGKSSFYRDTWVEVNLDAIYNNVTHIKEIIPESVEIFAVVKANAYGHDYVLVARTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I V+    P    +  + ++   +     +    ++ 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVIGPSPPRDVNVAAENDVALTVFQKEWVEEAVEIW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +  +    +L  I +H A AD+  +   
Sbjct: 121 DSPFPMKFHINFDSGMGRIGIRERKELKEFLRSLEDAPFLELEGIYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  +      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKAFGVNPTFIHTANSAATMRFDGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++    +  I++ + G+ +SY    +   +  IA   IGYADG+   L G 
Sbjct: 241 YLPIKLEPALSLHTTVEHIKRVIKGDRISYNVTYRTKTEEWIATVPIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  ++G  VPI+G+ITMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVQGKRVPIVGRITMDQCMLHLP--CEVPLGTKVTLIGQQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  S T NY+++  I  R  + +
Sbjct: 347 ATEVAEYSNTINYEIIATISFRVPRVF 373


>gi|17546090|ref|NP_519492.1| alanine racemase [Ralstonia solanacearum GMI1000]
 gi|20137209|sp|Q8XZM4|ALR_RALSO RecName: Full=Alanine racemase
 gi|17428386|emb|CAD15073.1| probable alanine racemase protein [Ralstonia solanacearum GMI1000]
          Length = 375

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 156/367 (42%), Gaps = 18/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL NN   +   + ++R  AV+K NAYG G E+    L       F +  
Sbjct: 3   RPIQAVIHGPALVNNLQVVRRHAADSRVWAVIKANAYGHGIERAYEGLRQ--ADGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E V+LR    Q  I +L G   P    ++    L   +    QL         G    
Sbjct: 61  LDEAVRLRQLGWQGPILLLEGFFKPEDLALVEQYRLTTTVHCEEQLRMLELARLKG-PVS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG +RLG +         ++         + ++H + AD P       QL  F 
Sbjct: 120 IQLKINTGMSRLGFAPAAYRAAWEHARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAE 239
                  G EASL++S+  L  P  H    RPG+ LYG +        +   +   +T +
Sbjct: 178 QATQGLPG-EASLSNSAATLWHPRAHRDWVRPGVILYGASPTGVAADIEGTGLMPAMTLK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++    G  V YG + +  +   I + A GYADGYP    G D  +         
Sbjct: 237 SELIAVQDLQPGATVGYGSRFEAEQPMRIGIVACGYADGYPRHAPGWDGNY-------TP 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+ +     VG  + ++G  + +D+VA A+GT  Y+L+ 
Sbjct: 290 VLVDGVRTRMVGRVSMDMITVDLAEVPGARVGAPVTLWGQGLPIDEVAHAAGTVGYELMC 349

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 350 ALAPRVP 356


>gi|257792515|ref|YP_003183121.1| alanine racemase [Eggerthella lenta DSM 2243]
 gi|257476412|gb|ACV56732.1| alanine racemase [Eggerthella lenta DSM 2243]
          Length = 441

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 99/386 (25%), Positives = 157/386 (40%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +   +IDL A+++N  ++        R  AVVK + YG G  + A    N+G     V
Sbjct: 66  RRWSWTEIDLNAIRHNTSAVKQRIDNGVRLMAVVKADGYGHGAVRCAKTALNSGADYLGV 125

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVS 121
            +V E ++LR     A I VL         ++    ++P +  S   + +     + GV 
Sbjct: 126 ATVNEAIELREALVNAPILVLSQPPETAIPLLLAYKVMPSVYTSEFAIQYAEAADAYGVR 185

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            PY L V+TG NR+G+   E ++F       +   L    +H A AD   +    +Q++R
Sbjct: 186 APYHLAVNTGMNRIGVRHDEVVEFMGQVSFHRALDLVGTFTHFATADSAETLDFQIQVKR 245

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQT 234
           F   +     +         A+S+  +  P+  F + R GI++YG            +  
Sbjct: 246 FIEAVTALRTAGVNPGIVHAANSAAAIRYPDVQFDMVRLGIAMYGLHPSGVTRPMIDLHP 305

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  +R     E VSYG   +      I    +GYADG    LSG         
Sbjct: 306 AMSVHARITDVRTVPMSEGVSYGMNYRSPGSVKICTVPVGYADGLRRGLSGR-------- 357

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT-------DSLSIEVGDYIQIFGPD----IKL 343
                  +KG     +G I MD  MF++          L   +GD + + G +    I L
Sbjct: 358 ---TDVILKGQRCHQVGNICMDQCMFEVDLRVYGSRRRLDPMIGDEVLLVGREGDSVITL 414

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           DD+A   GT NY+L      R  + Y
Sbjct: 415 DDMANTLGTINYELACGFSLRMPRVY 440


>gi|305680044|ref|ZP_07402854.1| alanine racemase [Corynebacterium matruchotii ATCC 14266]
 gi|305660664|gb|EFM50161.1| alanine racemase [Corynebacterium matruchotii ATCC 14266]
          Length = 378

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/383 (22%), Positives = 155/383 (40%), Gaps = 25/383 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     L   IDL A+  N   +  L   A+   VVK + Y  G   +A  +   G    
Sbjct: 1   MVVVNLLETVIDLDAIATNTRILKNLVQPAQLMCVVKADGYNHGAIPVARTVLANGADQL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG- 119
            V ++ E ++LR     A I               D N+   + S+       K  +   
Sbjct: 61  GVATLAEALELREAGITAPILCWIWSPEQDFAAALDANIHLAVVSMAHAQAIVKYAAGKP 120

Query: 120 -VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK----KLGQLSLIISHLACADDPSSHV 174
                  +++DTG +R G+   +         +        +++ ++SHLACAD+P +  
Sbjct: 121 EKLVQTTIKIDTGLHRSGVDESQWEAVFTLLKDAGTATGNIEVTGVMSHLACADEPGNPA 180

Query: 175 NSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINK 228
           N  Q   F   I+  + +        L++S  +L  P+++ ++ RPG+++YG +      
Sbjct: 181 NDTQAAAFNRAIALGRKLGLELPVNHLSNSPAVLTRPDFYHEMVRPGLAVYGYSPLADGN 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
            + +Q  ++   ++ +++    GE  SY    +  +   +AV   GYADG P        
Sbjct: 241 DYGLQPAMSWVGKVTVVKPIEPGEGTSYNLTWRAAKPGYLAVIPAGYADGLPRRAQNHV- 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDV 346
                     +  I G+  P +G+I MD  + D+ D+  ++  GD   IFGP  +   ++
Sbjct: 300 ----------EVTIGGHRYPQVGRICMDQFVIDLGDNPHNVRPGDEAIIFGPGGMSATEL 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A      NY ++     R  + Y
Sbjct: 350 ASRIQDINYAVICAPTGRTVRRY 372


>gi|238924324|ref|YP_002937840.1| alanine racemase [Eubacterium rectale ATCC 33656]
 gi|238875999|gb|ACR75706.1| alanine racemase [Eubacterium rectale ATCC 33656]
          Length = 376

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 28/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M  N  +R  IDL A+  N  SM N L      AAVVK + YG G E ++  L     + 
Sbjct: 1   MAINR-IRADIDLDAILYNMESMHNKLKPGTMMAAVVKADGYGHGAEAVSEVLEPLPYLW 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +  E ++L     +  I +L    P Q + I D ++ P + +       S++   
Sbjct: 60  GYAVATSNEAMELIAAGRKKPILILGLSFPEQFEEIVDNDVRPAVCTYETAKELSRIAVA 119

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G  + +E+ D            +  I +H A AD+ S     
Sbjct: 120 KNKTCKIHIKIDTGMCRIGFQVTEESADIIAQIAKLPNIMIEGIFTHFARADELSKEPAF 179

Query: 177 VQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q + F+ +I+    +G+E      ++S+GI+  P  +  + R GI+LYG          
Sbjct: 180 EQFDLFKRMIALVEARGVEIPIKHCSNSAGIVEIPECNMDMVRAGITLYGLWPSEEVDKS 239

Query: 232 ---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V++  +R+  +++   G  +SYGG   +     IA   +GY DGY   LS    
Sbjct: 240 KISLKPVMSLHSRVAYVKELEPGRHISYGGTFTVEHPMRIATVPVGYGDGYSRGLSN--- 296

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   IKG   PI G++ MD  M D+TD   +++GD + + G D    I ++
Sbjct: 297 --------KGWVLIKGKKAPICGRVCMDQFMVDVTDIPDVKIGDAVTLLGKDGDETITME 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            +   SG  NY+    I  R  + Y
Sbjct: 349 QLGELSGRFNYEFACLITPRVPRIY 373


>gi|270157427|ref|ZP_06186084.1| alanine racemase [Legionella longbeachae D-4968]
 gi|269989452|gb|EEZ95706.1| alanine racemase [Legionella longbeachae D-4968]
          Length = 353

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 97/361 (26%), Positives = 164/361 (45%), Gaps = 17/361 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + I+ +AL +N   +   +   +  A+VK NAYG G   +AP L    V  F V  +EE 
Sbjct: 1   MVIEPSALLHNLEQIKRFAPGKKIIAMVKANAYGCGVHIVAPVL-EGHVDAFGVACIEEA 59

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + L     +    +  G+    E  I   +    +   P    +             ++V
Sbjct: 60  LILHKIGSRTPCILFQGVFSPDEFKIVAQHQFGCVIHQPHQLQWLLNTPLNTPIKLWVKV 119

Query: 129 DTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +TG +RLG   QE  +          + +   +++HLACAD+P    N  Q+  F   IS
Sbjct: 120 NTGMHRLGFKPQELHEVMSALQTCTWVDKDIGLMTHLACADEPERIENYQQISLFEN-IS 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
                + S+A+S+ I+  P  H  + RPGI LYG +   N+      +  V+   + I  
Sbjct: 179 ITGFSQRSIANSAAIISFPQTHADVVRPGIMLYGVSPFANQTSIELGLLPVMRFVSAISA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +        V Y G  K  + S+I + A GY DGYP  +                 +++G
Sbjct: 239 VHHNPPFAPVGYSGIWKSEKHSVIGIVAAGYGDGYPRHI-----------AENTPVWVQG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             VPI+G+++MDM   D+T+   ++ G  ++++G +I ++ VA A+GT+ Y+LL +I  R
Sbjct: 288 KEVPIVGRVSMDMLAVDLTEHQEVKPGAPVELWGKNILVERVAKAAGTSGYELLCQISER 347

Query: 365 Y 365
            
Sbjct: 348 V 348


>gi|325690295|gb|EGD32299.1| alanine racemase [Streptococcus sanguinis SK115]
          Length = 369

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 144/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIDFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I  L         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILALGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLTRF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGRVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQAYPL--GTSVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|319638630|ref|ZP_07993392.1| alanine racemase [Neisseria mucosa C102]
 gi|317400379|gb|EFV81038.1| alanine racemase [Neisseria mucosa C102]
          Length = 352

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/365 (25%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L+ N+  +  L GN +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNAQIRLDNLRQNYRFLKELHGN-KLLAVIKADAYGHGAVRCAHALADI-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+EGV+LR    +  I +L G+    E    D   +                        
Sbjct: 60  VDEGVELRQNGIKNPIVLLEGVFEAAEYADVDRYDLWPAIGSQWQLEAFAHHEWQRPTTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                +  +  +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYAAAYTALKQSESVENIVKFSHFACADEPENGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +   +    ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGSVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP   S                 I G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAIDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++  S    +G  ++++G  I +++VA  +G   Y++L  I  R
Sbjct: 288 KRSRIIGRVSMDMITVELEASKE-GLGAEVELWGDVININEVAEVAGMIPYEILCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|302333717|gb|ADL23910.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 382

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVVGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|291525106|emb|CBK90693.1| alanine racemase [Eubacterium rectale DSM 17629]
          Length = 376

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 101/385 (26%), Positives = 168/385 (43%), Gaps = 28/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQ 58
           M  N  +R  IDL A+  N  SM N L      AAVVK + YG G E ++  L     + 
Sbjct: 1   MAINR-IRADIDLDAILYNMESMHNKLKPGTMMAAVVKADGYGHGAEAVSEILEPLPYLW 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + V +  E ++L     +  I +L    P Q + I D ++ P + +       S++   
Sbjct: 60  GYAVATSNEAMELIAAGRKKPILILGLSFPEQFEEIVDNDVRPAVCTYETAKELSRIAVA 119

Query: 119 -GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G  + +E+ D            +  I +H A AD+ S     
Sbjct: 120 KNKTCKIHIKIDTGMCRIGFQVTEESADIIAQIAKLPNIMIEGIFTHFARADELSKEPAF 179

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q + F+ +I+  +  E        ++S+GI+  P  +  + R GI+LYG          
Sbjct: 180 EQFDLFKRMIALVEAREVEIPIKHCSNSAGIVEIPECNMDMVRAGITLYGLWPSEEVDKS 239

Query: 232 ---MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V++  +R+  +++   G  +SYGG   +     IA   +GY DGY   LS    
Sbjct: 240 KISLKPVMSLHSRVAYVKELEPGRHISYGGTFTVEHPMRIATVPVGYGDGYSRGLSN--- 296

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   IKG   PI G++ MD  M D+TD   +++GD + + G D    I ++
Sbjct: 297 --------KGWVLIKGKKAPICGRVCMDQFMVDVTDIPDVKIGDAVTLLGKDGDETITME 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            +   SG  NY+    I  R  + Y
Sbjct: 349 QLGELSGRFNYEFACLITPRVPRIY 373


>gi|209543468|ref|YP_002275697.1| alanine racemase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531145|gb|ACI51082.1| alanine racemase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 387

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 132/366 (36%), Positives = 182/366 (49%), Gaps = 13/366 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L IDL A+  N+  +    G      A VK +AYGLG  +I P L  AG + FFV  + E
Sbjct: 19  LTIDLDAVAANYRILRDRVGPRTICGAAVKADAYGLGAARIVPVLAEAGCRTFFVAHLAE 78

Query: 68  GVKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYA 125
           G  +R L    A IFVL G  PG E  + +  L+PV++S+ Q+  +  L    G   P A
Sbjct: 79  GAAIRPLLGTDATIFVLNGAMPGTEAALHEHGLVPVLNSLEQIARWRDLARQAGRDLPAA 138

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQVD+G +R GLS  +         +       L++SHLACAD+P+   N  Q   F  L
Sbjct: 139 LQVDSGMSRFGLSDADVDALAARDGSLAGITPLLVMSHLACADEPAHPSNHAQRAAFLRL 198

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            +      ASLA+SSG+ +G ++HF + RPG +LYG        +PMQ VV  +ARI+  
Sbjct: 199 RARLPAAPASLAASSGLFMGSDWHFDMVRPGAALYGINPTPGWPNPMQPVVRLQARIVQT 258

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G  V YG      R S IA  A+GY DG+P    G      P             
Sbjct: 259 RWIGPGTAVGYGAAFIADRPSRIATLAVGYGDGFPRAAGGHGHAVLPERPAA-------- 310

Query: 306 MVPILGKITMDMTMFDITDSLSI--EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
            +PI+G+I+MD    D+TD      + G  + + GP   +D  A A+GT  Y+LL  +G 
Sbjct: 311 KLPIIGRISMDCLAVDVTDIGDAPLDAGTALDLIGPHHSIDSAAAAAGTIGYELLTGLGA 370

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 371 RYHRLY 376


>gi|94989166|ref|YP_597267.1| alanine racemase [Streptococcus pyogenes MGAS9429]
 gi|94993056|ref|YP_601155.1| alanine racemase [Streptococcus pyogenes MGAS2096]
 gi|166969429|sp|Q1JA50|ALR_STRPB RecName: Full=Alanine racemase
 gi|166969430|sp|Q1JKA0|ALR_STRPC RecName: Full=Alanine racemase
 gi|94542674|gb|ABF32723.1| alanine racemase [Streptococcus pyogenes MGAS9429]
 gi|94546564|gb|ABF36611.1| Alanine racemase [Streptococcus pyogenes MGAS2096]
          Length = 366

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 164/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   + ++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKEVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGVTYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     ++ +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLSKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|291563798|emb|CBL42614.1| alanine racemase [butyrate-producing bacterium SS3/4]
          Length = 391

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 164/384 (42%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +     ++DL  ++ N  +M   L    +   VVK +AYG G   +A  +       
Sbjct: 1   MEFDRIY-AEVDLGRIEENMEAMKEHLRPGTKMYGVVKTDAYGHGAVPVARTIDRFVC-G 58

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           + V +V+EG+KLR +  +  I  L  +  G+ +   + ++        +    S   +  
Sbjct: 59  YAVATVDEGLKLRRHGIEKEILSLGPVSAGRYQECLENDISLPFFEYRRAKELSDAAAAE 118

Query: 119 GVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G +    + VDTG +R+GL   E +++           +++ + +H A AD+        
Sbjct: 119 GKTAKIHIAVDTGMSRIGLFPDEGSVETVKEIAELPALRIAGMFTHFARADEADKTNAGE 178

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q  RF       K           ++S+GI+  P+++    R GI++YG          +
Sbjct: 179 QYSRFHAFCDAVKAAGVDVPVCHCSNSAGIVELPDFNMDAVRAGITIYGLYPSDEVKQDI 238

Query: 233 Q---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 +  ++ I  I++   G  VSYGG  K  +   IA  + GY DGYP  LSG    
Sbjct: 239 ISLKPAMALKSFITYIKEIGPGTEVSYGGTFKAEKTMRIATVSAGYGDGYPRNLSG---- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G+  I G    ILG+I MD  M D+T     + GD + + G     +I +++
Sbjct: 295 -------KGEVLIHGKRAKILGRICMDQFMVDLTGIPEAKEGDSVTLVGRDGNQEITMEE 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A  SG  +Y++   IG R  + Y
Sbjct: 348 LAEISGGFHYEIPCLIGKRVPRRY 371


>gi|323439214|gb|EGA96941.1| alanine racemase [Staphylococcus aureus O11]
          Length = 372

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 3   VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 62

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 63  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+P   + + Q +RF+ +++
Sbjct: 123 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGD-MTTEQYQRFKDMVN 181

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 182 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 241

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 242 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 290 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESSQSVEVAAEKQHTINYEVL 347

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 348 CNLSRRLPRIY 358


>gi|293609464|ref|ZP_06691766.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827916|gb|EFF86279.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 356

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK NAYG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRNALQYNLNRVKQLATNSKIVSMVKANAYGHGIKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSC--GVSHPYALQ 127
           +R    Q  + ++ G+    E  I        +I    Q  +  K             ++
Sbjct: 66  IRELGFQQPVTLIEGVFSEDEMPIAIKQKFECIIHHQQQFEWLIKHKQAYINQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG    E ++      ++    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKNPEIIEVIKTLKSEGFTCVLAMHFANADVD---HPLNEQQKQQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
               + AS  +S+ I   P  HF   RPGI LYG +   ++      ++ V+T  A +I 
Sbjct: 183 ACDPVLASCCNSAAIYKWPELHFDYVRPGIMLYGASPFADQTVHDLDLKPVMTFSAEVIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +      E V YG     T+   IA+ +IGY DGYP                     I  
Sbjct: 243 LNHIQTNEHVGYGSTFCATQAMDIAIVSIGYGDGYPRAY-----------IKPNYVAIDK 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ++G+++MDM   D+T  + +++G  ++++GP   +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QPCAVVGRVSMDMIAIDVTG-MKVKLGTPVELWGPHRLVDDVADANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PTR 353


>gi|323442408|gb|EGB00037.1| alanine racemase [Staphylococcus aureus O46]
          Length = 372

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 3   VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 62

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 63  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+P   + + Q +RF+ +++
Sbjct: 123 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGD-MTTEQYQRFKDMVN 181

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 182 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 241

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 242 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 290 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 347

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 348 CNLSRRLPRIY 358


>gi|258647632|ref|ZP_05735101.1| Mur ligase domain protein/alanine racemase [Prevotella tannerae
           ATCC 51259]
 gi|260852446|gb|EEX72315.1| Mur ligase domain protein/alanine racemase [Prevotella tannerae
           ATCC 51259]
          Length = 824

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 148/370 (40%), Gaps = 22/370 (5%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL A+  N +   + +    +   +VK +AYG G  +IA  L + GV    V   +E
Sbjct: 465 LEVDLAAIAANLNYFRSFMKPETKIVCMVKASAYGAGSVEIAKTLQDRGVDYLAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G  LR     + I ++            +D        S+ +    +       + P  +
Sbjct: 525 GADLRKAGITSNIIIMNPEMSSFNTLFAYDLEPEVYDFSLLEALIRAAKQQGITNFPIHI 584

Query: 127 QVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRT 184
           ++DTG  RLG     +         ++       + SH   +D P     +  Q E F  
Sbjct: 585 KLDTGMKRLGFDPLHDMPALIDRLHHQAALIPRSVFSHFVGSDSPAFDAFSDHQFELFDK 644

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P  H  + R G+ LYG     N  H +  V T +
Sbjct: 645 ASQQLQAAFSHKILRHICNSAGIERFPQRHLDMVRLGLGLYGVDPIDN--HIINNVTTLK 702

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR   AGE V Y  +  L R+S IA   IGYADG    L                
Sbjct: 703 TTILQIRDVQAGETVGYSRKGVLERNSRIAAIPIGYADGLNRHLGNRR----------AY 752

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD +++FGP + +  ++ A  T  Y++L 
Sbjct: 753 CLVNGRKAYYVGNICMDVCMIDVTDIP-CKEGDSVEVFGPHLPITVLSDALETIPYEILT 811

Query: 360 RIGTRYAKFY 369
            +  R  + Y
Sbjct: 812 SVSNRVKRIY 821


>gi|94991109|ref|YP_599209.1| alanine racemase [Streptococcus pyogenes MGAS10270]
 gi|166969431|sp|Q1JF94|ALR_STRPD RecName: Full=Alanine racemase
 gi|94544617|gb|ABF34665.1| Alanine racemase [Streptococcus pyogenes MGAS10270]
          Length = 366

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 164/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   + ++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKEVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSNLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     ++ +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLSKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|21911099|ref|NP_665367.1| alanine racemase [Streptococcus pyogenes MGAS315]
 gi|28895216|ref|NP_801566.1| alanine racemase [Streptococcus pyogenes SSI-1]
 gi|56808267|ref|ZP_00366035.1| COG0787: Alanine racemase [Streptococcus pyogenes M49 591]
 gi|139473190|ref|YP_001127905.1| alanine racemase [Streptococcus pyogenes str. Manfredo]
 gi|209559906|ref|YP_002286378.1| alanine racemase [Streptococcus pyogenes NZ131]
 gi|25452781|sp|Q8K5Z8|ALR_STRP3 RecName: Full=Alanine racemase
 gi|166969433|sp|A2RCT3|ALR_STRPG RecName: Full=Alanine racemase
 gi|226711064|sp|B5XI21|ALR_STRPZ RecName: Full=Alanine racemase
 gi|21905309|gb|AAM80170.1| putative alanine racemase [Streptococcus pyogenes MGAS315]
 gi|28810462|dbj|BAC63399.1| putative alanine racemase [Streptococcus pyogenes SSI-1]
 gi|134271436|emb|CAM29656.1| alanine racemase [Streptococcus pyogenes str. Manfredo]
 gi|209541107|gb|ACI61683.1| Alanine racemase [Streptococcus pyogenes NZ131]
          Length = 366

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 164/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   + ++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKEVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     ++ +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLSKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|319901186|ref|YP_004160914.1| alanine racemase [Bacteroides helcogenes P 36-108]
 gi|319416217|gb|ADV43328.1| alanine racemase [Bacteroides helcogenes P 36-108]
          Length = 831

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 93/370 (25%), Positives = 147/370 (39%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 473 LEVNLGAMIANLNYYRGKLKPETKIVCMVKASAYGAGSYEIAKTLQEHRVDYLAVAVADE 532

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 533 GSELRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFGLLEALIKEAEKEGITNFPVH 591

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG + ++          +       + SH   +D          Q+  F  
Sbjct: 592 VKLDTGMHRLGFAPEDMPRLIERLKGQNAVIPRSVFSHFVGSDSPQFDAFTRRQIVMFEK 651

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                  +    I   + +S+GI   P   F + R G+ LYG +   N      +  T +
Sbjct: 652 ASVELQEAFAHKILRHICNSAGIERFPGAQFDMVRLGLGLYGISPIDNSILNNVS--TLK 709

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR   A + V Y  +  L R S IA   IGYADG    L                
Sbjct: 710 TTILQIRDVPAEDTVGYSRKGHLNRPSRIAAIPIGYADGLNRHLGNGH----------AY 759

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 760 CLVNGCKASYVGNICMDVCMIDVTDI-DCKEGDTVEIFGDHLPITVLSDVLDTIPYEVLT 818

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 819 SVSTRVKRIY 828


>gi|28377409|ref|NP_784301.1| alanine racemase [Lactobacillus plantarum WCFS1]
 gi|254555592|ref|YP_003062009.1| alanine racemase [Lactobacillus plantarum JDM1]
 gi|300768938|ref|ZP_07078829.1| alanine racemase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308179615|ref|YP_003923743.1| alanine racemase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|3913026|sp|O08445|ALR_LACPL RecName: Full=Alanine racemase
 gi|2190422|emb|CAA70140.1| alanine racemase [Lactobacillus plantarum]
 gi|28270241|emb|CAD63142.1| alanine racemase [Lactobacillus plantarum WCFS1]
 gi|254044519|gb|ACT61312.1| alanine racemase [Lactobacillus plantarum JDM1]
 gi|300493459|gb|EFK28636.1| alanine racemase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308045106|gb|ADN97649.1| alanine racemase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 375

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 92/381 (24%), Positives = 158/381 (41%), Gaps = 29/381 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ +DL A+K N  + M          AVVK N YG G  ++A A   AG   F V
Sbjct: 7   HRHTQVTVDLQAIKTNISNEMAQKDELTELWAVVKANGYGHGIIQVAQAAKEAGATGFCV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
             ++E + LR       I VL    P    ++ + ++   + +   LT  + +++     
Sbjct: 67  AILDEALALRAAGFAEPILVLGITEPEYAPLVAEKDISLAVGTQDWLTTAAAILAANQVT 126

Query: 121 -SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL--GQLSLIISHLACADDPSSHVNSV 177
                 L +DTG  R+G    E L     +  +         I +H A AD       + 
Sbjct: 127 TPLHVHLALDTGMGRIGFQTPEELATAVTTLRQPQSPFDFEGIFTHFATADQADDTYFTH 186

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QL  ++ LI+    +   +   +S+  L     +  + R G++LYG      +++  +P+
Sbjct: 187 QLNNWKHLIAVVDELPRYVHVSNSATSLWHQACNGNMVRFGVALYGLNPSGRELSAPYPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++  AR+  +++   G+ VSYG      +D  I    IGYADGY   L G       
Sbjct: 247 QPALSLTARLTFVKRLARGKSVSYGATYTAAQDEWIGTVPIGYADGYERRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    I+G++ MD  M  +     + VG  + + G D    I L D+A 
Sbjct: 301 ------HVLVDGEFCEIVGRVCMDQLMVRLPH--EVPVGAKVTLVGTDGARTISLQDIAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT +Y++   +  R  + Y
Sbjct: 353 YCGTIHYEIACGLAPRVPRVY 373


>gi|149192465|ref|ZP_01870656.1| alanine racemase [Vibrio shilonii AK1]
 gi|148833698|gb|EDL50744.1| alanine racemase [Vibrio shilonii AK1]
          Length = 347

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/348 (27%), Positives = 154/348 (44%), Gaps = 18/348 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +     I+L AL +N   +   + N++  AVVK N YG G   IA      G   F
Sbjct: 1   MSYMKAATAHINLDALAHNLACIKQKAPNSKVMAVVKANGYGHGLRHIAKNAT--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  +EE ++LR       I +L G +   +  +  TN I  +    +     +      
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPNDLPVLVTNNIQTVVHCYEQLDALEQAELET 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                L+VD+G +RLG+  ++  +F         + +    +SH  CAD+  + +   Q+
Sbjct: 119 PVVVWLKVDSGMHRLGVREEQYQEFVERLHRCDNVAKPLRYMSHFGCADELDNTMTQQQI 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           E F +L     G E S+A+S+G+L          RPGI +YG +   +K       + V+
Sbjct: 179 ELFLSLTEGCNG-ERSMAASAGLLEWQQSRLDWVRPGIIMYGVSPFGDKTAADMGFKPVM 237

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ +I +R    GE V YG      RD+ + V AIGY DGYP T              
Sbjct: 238 TLKSHLIAVRDVKKGESVGYGATWTSQRDTKVGVIAIGYGDGYPRTAPN----------- 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
           G    + G  VPI G+++MDM   D+      +VGD   ++G ++  +
Sbjct: 287 GTPVLVNGRKVPIAGRVSMDMLTVDLGPDALDQVGDEAILWGEELPSE 334


>gi|15675637|ref|NP_269811.1| alanine racemase [Streptococcus pyogenes M1 GAS]
 gi|71911345|ref|YP_282895.1| alanine racemase [Streptococcus pyogenes MGAS5005]
 gi|20137226|sp|Q99Y98|ALR_STRP1 RecName: Full=Alanine racemase
 gi|13622847|gb|AAK34532.1| putative alanine racemase [Streptococcus pyogenes M1 GAS]
 gi|71854127|gb|AAZ52150.1| alanine racemase [Streptococcus pyogenes MGAS5005]
          Length = 366

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 163/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   + ++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKEVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     +  +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLPKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|119358056|ref|YP_912700.1| alanine racemase [Chlorobium phaeobacteroides DSM 266]
 gi|119355405|gb|ABL66276.1| alanine racemase [Chlorobium phaeobacteroides DSM 266]
          Length = 376

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 157/379 (41%), Gaps = 26/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 I L  LK+N   +    G   R   +VK NAYG   +K+A  L   G+ DF V 
Sbjct: 9   NMAEASISLGHLKHNIREIKQCVGTGVRIMGIVKANAYGHNMQKVAETLEAEGISDFGVA 68

Query: 64  SVEEGVKLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
           ++ E ++L+        A I         Q +      +   +     +    +      
Sbjct: 69  NIHEAIELKTGGALKKPANILSFSSPIIQQIEYYLHHQIDMTLCDANIMKAASAIAEKHN 128

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VDTG  RLGL   +AL+    +  +   +L  + +H   A+  +      Q 
Sbjct: 129 KKIGVHLKVDTGMGRLGLPPLQALELLRETERQPGLELKGVYTHF--AESANDDFTRRQF 186

Query: 180 ERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGG--TDKINKSHPM 232
           + F+T+   Y     K +    ASS  +L  P     + RPGI LYG      +  S  +
Sbjct: 187 KEFKTMTDAYETASGKTLCKHAASSGTLLNNPEMRLDMVRPGILLYGYKPYPALPSSITV 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+  EA++I I+       +SY    K  R   IA  + GYADGY   LS   +    
Sbjct: 247 RPVMQFEAKVIFIKTVAKDATISYNRTWKAARPVKIATISAGYADGYHRALSNHAT---- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASG 351
                   FI G     +G +TMD  M D+     +++GD   +FG     L+++A + G
Sbjct: 303 -------VFINGKSFQQVGTVTMDQFMVDLGTESDVKIGDRAILFGWEGPCLEELAGSIG 355

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           + +Y+LL  + +R  + +T
Sbjct: 356 SISYELLCSVSSRVKRVFT 374


>gi|296315218|ref|ZP_06865159.1| alanine racemase [Neisseria polysaccharea ATCC 43768]
 gi|296837855|gb|EFH21793.1| alanine racemase [Neisseria polysaccharea ATCC 43768]
          Length = 352

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 87/365 (23%), Positives = 156/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L ++I L  L++N+  +  + G  +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNVQIRLGNLRHNYQILKEMHGG-KLLAVLKADAYGHGAVRCAFALADL-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR       I +L G+    E    +   +                        
Sbjct: 60  IDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLSRHWKKPVKV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    +           +     +  SH +CAD+P S +  +Q+E F  
Sbjct: 120 WLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+    RI  
Sbjct: 180 GTKGLEGEE-SLANSAAILNIPEARRDWGRAGLALYGISPFGGSDDRLKPVMRLSTRIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP                     + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRA-----------PTNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   ++ D+    +G  ++++G  + ++ VA A+GT  Y+L+  I  R
Sbjct: 288 KLTRVIGRVSMDMMTIEL-DASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|315613615|ref|ZP_07888522.1| alanine racemase [Streptococcus sanguinis ATCC 49296]
 gi|315314306|gb|EFU62351.1| alanine racemase [Streptococcus sanguinis ATCC 49296]
          Length = 367

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIYLGAIRKNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVATAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      ++ +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGISKKLLILGVSEIEAVSLAKEYDITLTVAGLEWIQALLVRETDLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +       +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 SVHLKIDSGMGRIGFRDSSEAEQAQALLQQHGARVEGIFTHFATADEESDSYFNTQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + +++  K +      ++S+  L      F   R G ++YG       +N  + +   ++
Sbjct: 185 KAILASMKEVPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLNLPYDLTPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGTCMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKIYPL--GTKVTLIGSNGDKEITATQVAAYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|88856968|ref|ZP_01131618.1| alanine racemase [marine actinobacterium PHSC20C1]
 gi|88813785|gb|EAR23657.1| alanine racemase [marine actinobacterium PHSC20C1]
          Length = 366

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 154/373 (41%), Gaps = 27/373 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             I   A+ +N  ++ AL   A   AVVK N YG G  + A A  + G     V  + E 
Sbjct: 7   ATISTGAISHNIQTLRALVAPALVMAVVKANGYGHGAVESARAALDGGADWLGVADITEA 66

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR     A +                  +   ISS+ Q    +++ +   +    L+V
Sbjct: 67  LALRAAGIDAPLLAWLHQPGAGFSEAVHARVDLGISSIAQ---LTEVAAASGTACVHLKV 123

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-- 186
           DTG +R G  L E   F   +   +L     +    +   +  +  ++ Q++ F T +  
Sbjct: 124 DTGLHRNGAFLDEWQQFFEAAVAHELAGRIHVRGIWSHLANAGAEHDAKQIDLFSTAVAM 183

Query: 187 SHYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEA 240
           +H  G+   L   +     +  P+  F L R GIS YG     +       +   +T  A
Sbjct: 184 AHSVGLRPELRHLAASEGAIKHPDARFDLVRLGISAYGLAPADDVDVAALGLVPAMTLSA 243

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +++ +AG  VSYG       D+ + +  +GYADG P   +             G  
Sbjct: 244 PVISVKRVVAGSGVSYGYDFYCENDTTLVLVPLGYADGVPRHATNR-----------GPV 292

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            I G    I G++ MD  + ++ D+  + VGD   +FG         DD A A+G+ NY+
Sbjct: 293 SINGARGQIAGRVAMDQIVVNMGDTP-VAVGDRAVLFGDSSTGVPSADDWAEAAGSINYE 351

Query: 357 LLVRIGTRYAKFY 369
           ++ RIG R  + Y
Sbjct: 352 IVTRIGQRVVRRY 364


>gi|121997449|ref|YP_001002236.1| alanine racemase [Halorhodospira halophila SL1]
 gi|254802365|sp|A1WUS2|ALR_HALHL RecName: Full=Alanine racemase
 gi|121588854|gb|ABM61434.1| alanine racemase [Halorhodospira halophila SL1]
          Length = 364

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 17/368 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R  ++L+AL+ N  +  A +   R  AV+K + YG G   +A AL     + F VT
Sbjct: 2   SRAARATVNLSALRANLRTARAAAPQQRIMAVIKSDGYGHGLAVVAGALTGH-AEAFAVT 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             +E   LR    + RI +L G     +        + ++                    
Sbjct: 61  DADEAEALRAAGFRERIVLLQGPFAVDDLARAAAADLELVIHAHWQVEALAQAQLASPVT 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VD+G +RLG   +E  D     +    +      ++HLACADD        QLE F
Sbjct: 121 VWLKVDSGMHRLGFPPEEVQDAWRRLTEASCVRADIGFLTHLACADDRDDPATERQLETF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAE 239
           +       G   S A+S+G+L  P  H+   RPGI LYG +  ++   +   +Q  +  +
Sbjct: 181 QAACDGLPG-PRSAANSAGVLGWPASHYDWVRPGIMLYGASPFVDGRDEQPALQPAMAFQ 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            R++ +R   AG+ V YG          + V +IGY DGYP                G  
Sbjct: 240 GRVVAVRHLRAGDPVGYGATWSCPEAMPVGVVSIGYGDGYPRHA-----------PSGTP 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+I+MDM   D+     +  GD   ++G  ++ ++VA A GT  Y+L  
Sbjct: 289 VEVAGQRTRLVGRISMDMLAVDLRGLDPVAEGDPAILWGGAVRAEEVAGACGTIAYELFC 348

Query: 360 RIGTRYAK 367
           R+  R  +
Sbjct: 349 RMPPRVRR 356


>gi|225620639|ref|YP_002721897.1| alanine racemase [Brachyspira hyodysenteriae WA1]
 gi|225215459|gb|ACN84193.1| alanine racemase [Brachyspira hyodysenteriae WA1]
          Length = 366

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/377 (26%), Positives = 179/377 (47%), Gaps = 26/377 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +   +IDL+AL  N   + ++  + +   +VK NAYG G  +I+ A    G     V 
Sbjct: 2   SNYTIAEIDLSALNKNMQIIKSIIKDVKLLNIVKANAYGHGLIEISKASEKFGADALGVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSH 122
           +VEEG+K+R    +  I VL+     +  ++   NL P+IS+   L +Y K     G + 
Sbjct: 62  NVEEGIKIREAGVKLPILVLFQHFKDESDLVCKYNLSPIISNDECLEYYDKFLKKNGGNL 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS---HVNSVQL 179
              ++VDTG NR+G   ++ +       +     +  I +H A +D          + Q+
Sbjct: 122 NLYIKVDTGLNRMGAKPEDVVPLAKKVLSYSTLNIEGINTHYAASDMQDDYSVSFTNKQI 181

Query: 180 ERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           + F  +++        +      +S+ I+   N +F + R GI LYG  D       ++ 
Sbjct: 182 KVFNDVLNDLNENGIKIKNAHTSNSAAIISYKNTYFDMVRAGIILYGYNDDF---LGIKP 238

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           +++ ++ ++L+R    GE +SYG      +D+ +AV  IGYADG P  LS          
Sbjct: 239 ILSLKSHVVLVRTIKKGESISYGMTWTADKDTRVAVIPIGYADGVPRKLSN--------- 289

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVALASGT 352
               +  I G   P+ G+I MD  + +I +  S+++GD + IFG D  +  D +A    +
Sbjct: 290 --NWEVKINGKYYPLRGRICMDSIIAEIGND-SVKIGDEVLIFGNDEKLNADTLAARIDS 346

Query: 353 TNYDLLVRIGTRYAKFY 369
            ++++LV IG R  + Y
Sbjct: 347 ISHEVLVNIGERVKRVY 363


>gi|307946726|ref|ZP_07662061.1| alanine racemase [Roseibium sp. TrichSKD4]
 gi|307770390|gb|EFO29616.1| alanine racemase [Roseibium sp. TrichSKD4]
          Length = 400

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 143/366 (39%), Positives = 201/366 (54%), Gaps = 10/366 (2%)

Query: 8   RLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           RL IDL A+  NW  +   LS  A  AA VK +AYG G  + + ALY+ G + FFV    
Sbjct: 37  RLTIDLKAITANWTILKNKLSDRAECAATVKADAYGTGLTQASKALYDDGCRTFFVALPV 96

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E +KL    P A I+VL G+ PG  K + +  + PV++S  +   + +     G  HP A
Sbjct: 97  EALKLCRGMPDATIYVLDGLFPGTAKTLAENGIRPVLASTDEVQEWAAFCRETGQHHPAA 156

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L VDTG +RLGLS  E  +   N   +++   SLI+SHLAC  DP   +NS QL+RF+ L
Sbjct: 157 LHVDTGIHRLGLSAAEFEEVMLNGDIREVFTPSLIMSHLACGADPEHPMNSEQLKRFKNL 216

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            S Y  I  SLA+S+G+ LG +YHF L RPGISLYGG       +PMQ  V  EARI++ 
Sbjct: 217 TSAYPDIPKSLANSAGVFLGEDYHFDLVRPGISLYGGKALDTMPNPMQPAVKVEARIMMA 276

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G+ + YG  +   RD  +AV A GYADG        D      +  G    I+G+
Sbjct: 277 RSVPQGDTIGYGAMQTARRDLRVAVVAAGYADGMMRRAGSTD------IAPGAYAMIEGH 330

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
             P+LG+++MDM   D+TD        G ++++ GP +   D+A  + T +Y+ L  +G 
Sbjct: 331 KAPLLGRVSMDMITLDVTDISPHLTRRGAFVEMMGPQLAASDLAAYADTIDYEYLTNLGR 390

Query: 364 RYAKFY 369
           R+ + Y
Sbjct: 391 RFLRRY 396


>gi|157157280|ref|YP_001462440.1| alanine racemase [Escherichia coli E24377A]
 gi|193066540|ref|ZP_03047582.1| alanine racemase [Escherichia coli E22]
 gi|193071186|ref|ZP_03052109.1| alanine racemase [Escherichia coli E110019]
 gi|194425883|ref|ZP_03058439.1| alanine racemase [Escherichia coli B171]
 gi|194434909|ref|ZP_03067154.1| alanine racemase [Shigella dysenteriae 1012]
 gi|209918429|ref|YP_002292513.1| alanine racemase [Escherichia coli SE11]
 gi|218694704|ref|YP_002402371.1| alanine racemase [Escherichia coli 55989]
 gi|218700229|ref|YP_002407858.1| alanine racemase [Escherichia coli IAI39]
 gi|218704705|ref|YP_002412224.1| alanine racemase [Escherichia coli UMN026]
 gi|256018560|ref|ZP_05432425.1| alanine racemase [Shigella sp. D9]
 gi|260843482|ref|YP_003221260.1| alanine racemase 2, PLP-binding [Escherichia coli O103:H2 str.
           12009]
 gi|260854851|ref|YP_003228742.1| alanine racemase 2, PLP-binding [Escherichia coli O26:H11 str.
           11368]
 gi|293404725|ref|ZP_06648717.1| alr [Escherichia coli FVEC1412]
 gi|298380368|ref|ZP_06989967.1| alr [Escherichia coli FVEC1302]
 gi|300816877|ref|ZP_07097097.1| alanine racemase [Escherichia coli MS 107-1]
 gi|300821043|ref|ZP_07101192.1| alanine racemase [Escherichia coli MS 119-7]
 gi|300896564|ref|ZP_07115085.1| alanine racemase [Escherichia coli MS 198-1]
 gi|300906907|ref|ZP_07124581.1| alanine racemase [Escherichia coli MS 84-1]
 gi|300920384|ref|ZP_07136819.1| alanine racemase [Escherichia coli MS 115-1]
 gi|300921848|ref|ZP_07138005.1| alanine racemase [Escherichia coli MS 182-1]
 gi|301305555|ref|ZP_07211646.1| alanine racemase [Escherichia coli MS 124-1]
 gi|301327101|ref|ZP_07220381.1| alanine racemase [Escherichia coli MS 78-1]
 gi|307310056|ref|ZP_07589706.1| alanine racemase [Escherichia coli W]
 gi|331662583|ref|ZP_08363506.1| alanine racemase [Escherichia coli TA143]
 gi|331667571|ref|ZP_08368435.1| alanine racemase [Escherichia coli TA271]
 gi|331676966|ref|ZP_08377662.1| alanine racemase [Escherichia coli H591]
 gi|331682674|ref|ZP_08383293.1| alanine racemase [Escherichia coli H299]
 gi|332279622|ref|ZP_08392035.1| alanine racemase [Shigella sp. D9]
 gi|157079310|gb|ABV19018.1| alanine racemase [Escherichia coli E24377A]
 gi|192925819|gb|EDV80471.1| alanine racemase [Escherichia coli E22]
 gi|192955518|gb|EDV85998.1| alanine racemase [Escherichia coli E110019]
 gi|194415938|gb|EDX32204.1| alanine racemase [Escherichia coli B171]
 gi|194416842|gb|EDX32966.1| alanine racemase [Shigella dysenteriae 1012]
 gi|209911688|dbj|BAG76762.1| alanine racemase [Escherichia coli SE11]
 gi|218351436|emb|CAU97144.1| alanine racemase 2, PLP-binding [Escherichia coli 55989]
 gi|218370215|emb|CAR18011.1| alanine racemase 2, PLP-binding [Escherichia coli IAI39]
 gi|218431802|emb|CAR12687.1| alanine racemase 2, PLP-binding [Escherichia coli UMN026]
 gi|257753500|dbj|BAI25002.1| alanine racemase 2, PLP-binding [Escherichia coli O26:H11 str.
           11368]
 gi|257758629|dbj|BAI30126.1| alanine racemase 2, PLP-binding [Escherichia coli O103:H2 str.
           12009]
 gi|291426933|gb|EFE99959.1| alr [Escherichia coli FVEC1412]
 gi|298277810|gb|EFI19324.1| alr [Escherichia coli FVEC1302]
 gi|300359593|gb|EFJ75463.1| alanine racemase [Escherichia coli MS 198-1]
 gi|300401340|gb|EFJ84878.1| alanine racemase [Escherichia coli MS 84-1]
 gi|300412600|gb|EFJ95910.1| alanine racemase [Escherichia coli MS 115-1]
 gi|300421774|gb|EFK05085.1| alanine racemase [Escherichia coli MS 182-1]
 gi|300526342|gb|EFK47411.1| alanine racemase [Escherichia coli MS 119-7]
 gi|300530651|gb|EFK51713.1| alanine racemase [Escherichia coli MS 107-1]
 gi|300839144|gb|EFK66904.1| alanine racemase [Escherichia coli MS 124-1]
 gi|300846279|gb|EFK74039.1| alanine racemase [Escherichia coli MS 78-1]
 gi|306909774|gb|EFN40268.1| alanine racemase [Escherichia coli W]
 gi|315060440|gb|ADT74767.1| Alanine racemase [Escherichia coli W]
 gi|315254855|gb|EFU34823.1| alanine racemase [Escherichia coli MS 85-1]
 gi|320181803|gb|EFW56713.1| Alanine racemase, catabolic [Shigella boydii ATCC 9905]
 gi|320199227|gb|EFW73818.1| Alanine racemase, catabolic [Escherichia coli EC4100B]
 gi|323153142|gb|EFZ39406.1| alanine racemase [Escherichia coli EPECa14]
 gi|323162287|gb|EFZ48145.1| alanine racemase [Escherichia coli E128010]
 gi|323172462|gb|EFZ58099.1| alanine racemase [Escherichia coli LT-68]
 gi|323185649|gb|EFZ71010.1| alanine racemase [Escherichia coli 1357]
 gi|323378997|gb|ADX51265.1| alanine racemase [Escherichia coli KO11]
 gi|323947528|gb|EGB43532.1| alanine racemase [Escherichia coli H120]
 gi|324017565|gb|EGB86784.1| alanine racemase [Escherichia coli MS 117-3]
 gi|324117262|gb|EGC11169.1| alanine racemase [Escherichia coli E1167]
 gi|331061005|gb|EGI32969.1| alanine racemase [Escherichia coli TA143]
 gi|331065156|gb|EGI37051.1| alanine racemase [Escherichia coli TA271]
 gi|331075655|gb|EGI46953.1| alanine racemase [Escherichia coli H591]
 gi|331080305|gb|EGI51484.1| alanine racemase [Escherichia coli H299]
 gi|332092228|gb|EGI97305.1| alanine racemase [Shigella boydii 5216-82]
 gi|332097916|gb|EGJ02889.1| alanine racemase [Shigella dysenteriae 155-74]
 gi|332101974|gb|EGJ05320.1| alanine racemase [Shigella sp. D9]
          Length = 356

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|194364223|ref|YP_002026833.1| alanine racemase [Stenotrophomonas maltophilia R551-3]
 gi|194347027|gb|ACF50150.1| alanine racemase [Stenotrophomonas maltophilia R551-3]
          Length = 355

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 163/369 (44%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L G  +  A++K +AYG G  + A AL       F V +
Sbjct: 2   RPARALIDLGALRSNYRLAREL-GGGKALAIIKADAYGHGAVRCAQAL-EGEADGFGVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR     A I +L GI       ++ + +    + S  QL   +          
Sbjct: 60  IEEALELRQAGIGAPILLLEGIFEASDMALVAEHDFWFAVGSPWQLEALAAF-DSPRPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +RLGL +                +  ++++HLA AD+  S     Q   F 
Sbjct: 119 VWLKLDSGMHRLGLDVDSFRAAHARLSALPQVERVVLMTHLARADELDSERTHEQAATFA 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEA 240
             I   +G E S+ +S  +L  P+      RPG+ LYG        + +  ++ V+T ++
Sbjct: 179 RAIDGLEG-ETSVCNSPALLGWPDVRSDWVRPGLMLYGANPLPDNTDLTARLRPVMTMQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I  R   +GE V YG +      + + V A+GYADGYP                G   
Sbjct: 238 KVIAERWIESGEPVGYGARFVSKARTRVGVVALGYADGYPQFAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    ++G+++MDM   D+T      VG  ++++G    L ++A   G + Y L   
Sbjct: 287 LIDGQPGALIGRVSMDMLTVDLTAHPQAGVGSVVELWGNAPTLSELAPRCGVSAYQLPCG 346

Query: 361 IGTRYAKFY 369
           +  R A+ Y
Sbjct: 347 V-KRVARVY 354


>gi|327394099|dbj|BAK11521.1| alanine racemase, catabolic DadB [Pantoea ananatis AJ13355]
          Length = 356

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   ID  AL++N   +   +  +R  +VVK NAYG G  ++  +L       F + 
Sbjct: 2   SRPIVATIDQQALRHNLAIVRRAAPTSRVWSVVKANAYGHGIARVWESLSA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  + D   +                +      
Sbjct: 60  NMEEAILLREQGWKKPILLLEGFFHPDDLALIDRYRLTTSVHSNWQIHALANATLSAPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++     H     +      +++H A A++P   V  ++     
Sbjct: 120 LYLKINSGMNRLGFRPEQVNGIWHKLRALENVGDITLMAHFADAENPDGIVEPLKRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  H+   RPGI LYG +   N     S  ++ V+T  
Sbjct: 177 AQATEGLDSPVSLSNSACTLWHPEAHYDWVRPGIILYGASPSGNWQDIASSGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AG+ V YG +   T+   I V A GYADGYP                G  
Sbjct: 237 SEIIGVQQLQAGDGVGYGYRYHATQPQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G M  ++G ++MDM   D+T      +G  ++++G ++K+D VA A+GT  Y+L+ 
Sbjct: 286 VAVDGIMTQVVGAVSMDMITVDLTPCPQAGIGSSVELWGENVKIDQVAKAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|167770383|ref|ZP_02442436.1| hypothetical protein ANACOL_01726 [Anaerotruncus colihominis DSM
           17241]
 gi|167667390|gb|EDS11520.1| hypothetical protein ANACOL_01726 [Anaerotruncus colihominis DSM
           17241]
          Length = 405

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 96/391 (24%), Positives = 160/391 (40%), Gaps = 33/391 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M        +IDL  + +N   +   L+   RT AVVK +AYG G   ++ AL   G   
Sbjct: 1   MDYLRRTWAEIDLDRIVHNHRIIRQRLTPGCRTMAVVKADAYGHGDGYVSRALQQDGADW 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V+++ E V LR       + +L    P    ++ + +L   + S       SK  +  
Sbjct: 61  FAVSNINEAVSLRRQGVVRPVLILGYTPPEMAGLLVEQSLTQTVYSGEYARALSKESAAR 120

Query: 120 V-SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-----QLSLIISHLACADDPSSH 173
             +    +++DTG +R+G   Q+       +   ++        +   +H +CAD+ S+ 
Sbjct: 121 KLTVDCHIKIDTGMSRIGFFAQQGHAAQAANEIARVCALPGLSCTGAFTHFSCADEYSAD 180

Query: 174 ---VNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
                  Q E F   +     +  +       +S+  L  P YH  + RPG+ LYG +  
Sbjct: 181 SRAFTHRQFEVFMETLGLLKQAGVEFELRHCCNSAATLAYPEYHLDMVRPGVVLYGLSPS 240

Query: 226 INKSHPMQ--TVVTAEARIILIRKALAGELVSYGGQKKLTR-DSLIAVAAIGYADGYPLT 282
              +        ++    + +++       VSYG +    +    IA  AIGYADGY   
Sbjct: 241 PECAGMAALLPAMSLYTTVTMVKTLDQHAAVSYGRRYVTPKGGRRIASIAIGYADGYRRN 300

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-- 340
            +             G+  I+G   PI G + MD  M D+     ++ GD + + G +  
Sbjct: 301 FTN-----------KGRVIIRGQYAPITGAVCMDQLMVDVNAIDGVQSGDVVTLVGENGG 349

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             I LDD A  +GT NY+    IG R  + Y
Sbjct: 350 AAITLDDFAALNGTINYEECCLIGRRVPRVY 380


>gi|270294455|ref|ZP_06200657.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275922|gb|EFA21782.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 838

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 480 LEVNLGAMIANLNYYRGKLKPETKMVCMVKASAYGAGSYEIAKTLQEHHVDYLAVAVADE 539

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 540 GSELRKAGITANIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 598

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRT 184
           +++DTG +RLG + ++          +       + SHL  +D          Q+E F  
Sbjct: 599 IKLDTGMHRLGFAPEDMPRLIERLKGQNAVIARSVFSHLVGSDSQQFDSFTRRQIEMFEK 658

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P   F + R GI LYG     N    M  V T +
Sbjct: 659 ASMELQEAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGVNPIDN--SIMNNVSTLK 716

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  LTR S IA   IGYADG    L                
Sbjct: 717 TTILQIRDVPEEDTVGYSRKGHLTRPSRIAALPIGYADGLNRHLGNGH----------AY 766

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 767 CLVNGQRAAYVGNICMDVCMIDVTDI-DCKEGDSVEIFGDHLPITVLSDVLETIPYEVLT 825

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 826 SVSTRVKRIY 835


>gi|78185553|ref|YP_377987.1| alanine racemase [Synechococcus sp. CC9902]
 gi|78169847|gb|ABB26944.1| alanine racemase [Synechococcus sp. CC9902]
          Length = 375

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 24/380 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           +  +   +++   A+K N  ++   L+      AVVK + YG G   +A A  + G    
Sbjct: 5   NPRQRAWVEVSPAAIKANASALCQHLTPGTELMAVVKADGYGHGAVSVANAALDGGAASL 64

Query: 61  FVTSVEEGVKLRLYTPQARI-FVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSC 118
            V +++EG++LR    +A I  +     P   +   +  L+P +SS+      ++     
Sbjct: 65  GVATLQEGLELRRAGLKAPILLLSNLCDPEDLRTCLEWQLMPTLSSLADAKLCHALAEDS 124

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G      L++DTG +RLG +L +  + T    + K  +L  I SHLACADD S+ V   Q
Sbjct: 125 GRRFKVQLKIDTGMSRLGCALDDGAETTQAIQHLKNLELKGIYSHLACADDRSTTVTQQQ 184

Query: 179 LERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPM 232
            +RF+++I        G+   LA+S+G LL PN H+ L R G++LYG      +    P+
Sbjct: 185 RQRFQSVIETLPQRGVGLCRHLANSAGTLLEPNLHYDLVRVGLALYGHAPADHLRDIVPL 244

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           ++ ++  A++ LIR+  AG  VSYG Q        +AV AIGYADG   +LSG       
Sbjct: 245 RSALSVRAKVTLIREIKAGTGVSYGHQYISPNARRLAVVAIGYADGVLRSLSGQID---- 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD----DVAL 348
                     +   +P +G ITMD  + D TD+  +  G  + + G D  ++      + 
Sbjct: 301 -------VLHRDKRLPQVGAITMDQLLIDATDATDLHPGSIVTLLGRDQSVEITPQSWSD 353

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
              +  +++L     R  + 
Sbjct: 354 RCQSIPWEILCGFKHRLPRV 373


>gi|325525874|gb|EGD03590.1| alanine racemase [Burkholderia sp. TJI49]
          Length = 344

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 91/358 (25%), Positives = 151/358 (42%), Gaps = 20/358 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +G ++  AVVK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRYAGPSKVWAVVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTTVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD+      + QL  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKYRAAWERARACPGIGQITLMTHFSDADNERG--VAEQLATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
             ++  G   SLA+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAANIAGAR-SLANSAAVLWHPDTHFDWVRPGIVLYGASPSGLSSDIADTGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ + YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTIGKGQAIGYGSTFSAQAPMRIGVVACGYADGYPR-----------VAPEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA   GT  Y+L+
Sbjct: 287 IVDGIRTRIVGRVSMDMITVDLTPCPQAGVGARVELWGNALSIDDVARHCGTIGYELM 344


>gi|260433528|ref|ZP_05787499.1| alanine racemase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417356|gb|EEX10615.1| alanine racemase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 344

 Score =  266 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 135/364 (37%), Positives = 190/364 (52%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL I+L AL NNW +++A + +  T AVVK +AYGLG   +A AL   GV+ FFV   E
Sbjct: 4   ARLTINLHALVNNWRALDAKT-DVETGAVVKADAYGLGAGPVASALAEEGVRKFFVAVTE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG  +R    P   IFV  G   G   ++ D +L+P+++S  Q   + + +     HP+ 
Sbjct: 63  EGAAVRRAIGPGPLIFVFSGHMEGDADLLRDHDLVPLLNSPEQ---FQRHIQALPVHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQ+DTG NRLGL   +     + +         L++SHLACAD+P   +N  QLE FR +
Sbjct: 120 LQLDTGMNRLGLEPADWSALRNRAEAL---NPVLVMSHLACADEPDHPMNRQQLEAFRGM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                    SLA++ G+LLGP YHF L RPGI LYGG            VVT +  +I +
Sbjct: 177 TEGVSA-PRSLAATGGMLLGPEYHFDLCRPGIGLYGGLPFTAAK----PVVTVDLPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG   K  R S IA  A GYADG    + G           G   F    
Sbjct: 232 RDLAVGESVGYGNTWKARRPSRIATVAAGYADGLHRAIGG-----------GIDAFAGNL 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+I+MD+   D+TD       + ++I      +DD+A A+GT  Y++L  +G+RY
Sbjct: 281 PCPVVGRISMDLITIDVTDLP--HTPERLRILNGHQTVDDLAEAAGTIGYEILTSLGSRY 338

Query: 366 AKFY 369
           ++ Y
Sbjct: 339 SRGY 342


>gi|306824745|ref|ZP_07458089.1| alanine racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432956|gb|EFM35928.1| alanine racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 367

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 157/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M +   N     AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIRLGAIRQNIQQMGSHIPNGTLKFAVVKANAYGHGAVAVATAIQDI-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGINKKILILGVSELEAVSLAKEYDITLTVAGLEWIQALLDKEADLTDL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       D   +   +   ++  I +H A AD+ S    + QLE F
Sbjct: 125 TVHLKIDSGMGRIGFRDASEADLVQDLLKQHGARVEGIFTHFATADEESDTYFNQQLECF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + +++  K +      ++S+  L      F   R G S+YG       +N  + +   +T
Sbjct: 185 KAILASMKEVPELVHASNSATTLWHAETIFNAVRMGDSMYGLNPSGEVLNLPYDLTPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKIYPL--GTKVTLIGSNGDQEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|49484296|ref|YP_041520.1| alanine racemase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257426208|ref|ZP_05602623.1| alanine racemase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428867|ref|ZP_05605261.1| alanine racemase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257434187|ref|ZP_05610537.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus E1410]
 gi|257437100|ref|ZP_05613140.1| alanine racemase [Staphylococcus aureus subsp. aureus M876]
 gi|258422928|ref|ZP_05685828.1| alanine racemase [Staphylococcus aureus A9635]
 gi|282904737|ref|ZP_06312611.1| alanine racemase [Staphylococcus aureus subsp. aureus C160]
 gi|282906415|ref|ZP_06314266.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909383|ref|ZP_06317198.1| alanine racemase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911637|ref|ZP_06319436.1| alanine racemase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914916|ref|ZP_06322696.1| alanine racemase [Staphylococcus aureus subsp. aureus M899]
 gi|282920247|ref|ZP_06327971.1| alanine racemase [Staphylococcus aureus subsp. aureus C427]
 gi|282925459|ref|ZP_06333113.1| alanine racemase [Staphylococcus aureus subsp. aureus C101]
 gi|283958850|ref|ZP_06376295.1| alanine racemase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293508989|ref|ZP_06667776.1| alanine racemase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510901|ref|ZP_06669600.1| alanine racemase [Staphylococcus aureus subsp. aureus M809]
 gi|293547502|ref|ZP_06672177.1| alanine racemase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428657|ref|ZP_06821283.1| alanine racemase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|60389625|sp|Q6GF03|ALR1_STAAR RecName: Full=Alanine racemase 1
 gi|49242425|emb|CAG41139.1| alanine racemase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257270913|gb|EEV03086.1| alanine racemase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274209|gb|EEV05726.1| alanine racemase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257280826|gb|EEV10971.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus E1410]
 gi|257283493|gb|EEV13620.1| alanine racemase [Staphylococcus aureus subsp. aureus M876]
 gi|257846952|gb|EEV70966.1| alanine racemase [Staphylococcus aureus A9635]
 gi|282312860|gb|EFB43261.1| alanine racemase [Staphylococcus aureus subsp. aureus C101]
 gi|282316107|gb|EFB46488.1| alanine racemase [Staphylococcus aureus subsp. aureus C427]
 gi|282321119|gb|EFB51450.1| alanine racemase [Staphylococcus aureus subsp. aureus M899]
 gi|282324402|gb|EFB54715.1| alanine racemase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326653|gb|EFB56951.1| alanine racemase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282330365|gb|EFB59883.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282594770|gb|EFB99747.1| alanine racemase [Staphylococcus aureus subsp. aureus C160]
 gi|283789568|gb|EFC28391.1| alanine racemase [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290919622|gb|EFD96695.1| alanine racemase [Staphylococcus aureus subsp. aureus M1015]
 gi|291094693|gb|EFE24965.1| alanine racemase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466186|gb|EFF08713.1| alanine racemase [Staphylococcus aureus subsp. aureus M809]
 gi|295127327|gb|EFG56967.1| alanine racemase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|315193230|gb|EFU23628.1| alanine racemase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 382

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q  RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYHRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|317054962|ref|YP_004103429.1| alanine racemase [Ruminococcus albus 7]
 gi|315447231|gb|ADU20795.1| alanine racemase [Ruminococcus albus 7]
          Length = 373

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 153/382 (40%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M+       +IDL+A+  N      L   +     VVK + YG   E I P L    GV+
Sbjct: 1   MNFLRRCWAEIDLSAVDYNVCEYKKLLPQDTELMCVVKASCYGHSDELIVPRLQQVHGVR 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V+++ EG++LR       I +L    P     +   ++I   + +      S   + 
Sbjct: 61  YFAVSNILEGIRLREIGINGDILILGYTPPECAAELVKYDIIQACTELCYAQELS--ANA 118

Query: 119 GVSHPYALQVDTGFNRLGLS--LQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSH 173
             +      VDTG  R+G+    +E  D            L  I +H + AD   D    
Sbjct: 119 NGTVRLHGAVDTGMTRIGVHGTAEEQADELAKVSALPNISLEGIFTHFSSADGIDDADEK 178

Query: 174 VNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
              +Q ERF  +         +   A + +S+G   G      L R GI LYG      K
Sbjct: 179 YTQMQSERFFRVRDLLKEKGIRLKHAHIKNSAGGAYGYGDESTLARLGIILYGLYPDPAK 238

Query: 229 SHPM--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           S P   + V+T +A +  ++    G  VSYG      R   +A    GYADGYP  LS  
Sbjct: 239 SLPFVPKPVMTLKAVVSQVKWIDEGTAVSYGRTFVSDRRMKLATVTAGYADGYPRALSN- 297

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                      G+  I+G    I G++ MD  M D+TD      GD + +   +I  D +
Sbjct: 298 ----------KGEVIIRGKKCRICGRVCMDQFMCDVTDIPDAAPGDEVILMNAEINADVI 347

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  +GT  Y++   I +R  + 
Sbjct: 348 AALTGTIGYEITCDITSRVPRV 369


>gi|107026636|ref|YP_624147.1| alanine racemase [Burkholderia cenocepacia AU 1054]
 gi|116692174|ref|YP_837707.1| alanine racemase [Burkholderia cenocepacia HI2424]
 gi|105896010|gb|ABF79174.1| alanine racemase [Burkholderia cenocepacia AU 1054]
 gi|116650174|gb|ABK10814.1| alanine racemase [Burkholderia cenocepacia HI2424]
          Length = 373

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 157/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AV+K NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVIKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L G+    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGVFEPADVELADHHRLTVAVHCDEQLDLLIAAKPRQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QL++F  
Sbjct: 121 QLKMNSGMNRLGYRPAAFRAAWERAASAPSIGKITLMMHFANADEGE---VDWQLDQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S+++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 TTAGIPG-ERSVSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLSS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPDETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSRVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|319785910|ref|YP_004145385.1| alanine racemase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464422|gb|ADV26154.1| alanine racemase [Pseudoxanthomonas suwonensis 11-1]
          Length = 356

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 161/368 (43%), Gaps = 18/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+    +L G  R  AVVK +AYG G  + A AL +     F V  
Sbjct: 2   RPARALIDLAALRHNYRLARSL-GGGRALAVVKADAYGHGAVRCAAALEHE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  +   + +  +   P      +          
Sbjct: 60  IEEALVLRGAGIRKPILLLEGFFEASELPLLLEHDLWTVVHAPWQVEALERTVLPAPLTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R+G+   +  +           ++++ +SH A AD+        QL+ F  
Sbjct: 120 WLKLDSGMHRVGIGADDYAEAWRRLEALPHVRMAVKMSHFARADELECARTREQLDTFAA 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEAR 241
             +   G E S+ +S  +L  P       RPG+ LYG +           ++ V+T E++
Sbjct: 180 ATAGLPG-EVSVCNSPALLGWPQARGHWARPGLMLYGVSPFAQAHDLAAQLRPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+  AGE V YG +      + + V A+GYADGYP                G    
Sbjct: 239 VIAVRELPAGEPVGYGARFVTEAPTRVGVVAMGYADGYPQFAVN-----------GTPVA 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G    ++G+++MDM   D+TD     VG  ++++G  +    V   S T++Y LL  +
Sbjct: 288 IDGRPGRLVGRVSMDMLTIDLTDHPQAGVGSTVELWGNQVSAAQVVANSQTSSYRLLCAV 347

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 348 -KRVPLHY 354


>gi|237748485|ref|ZP_04578965.1| alanine racemase [Oxalobacter formigenes OXCC13]
 gi|229379847|gb|EEO29938.1| alanine racemase [Oxalobacter formigenes OXCC13]
          Length = 359

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 157/368 (42%), Gaps = 19/368 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   ID+ A+++N   + +    A+   VVK NAYG G E+   AL +     F +  
Sbjct: 3   RPLVANIDIAAMQHNLSVVRSTVPRAKIWGVVKANAYGHGLERSVRALND--ADGFALIE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +E  + LR    +  I +L G     E  I     I       +     +     +    
Sbjct: 61  MESAIHLREIGWKKPILLLEGFFYAHELPILARYNIAFAVHCDEQIDMLEKSRLDLPVDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN--SVQLERF 182
            L+++TG NRLG    E              +    ++H A ++           QL+RF
Sbjct: 121 HLKMNTGMNRLGFLPAEYSKAYERLKKIPNVREISHMTHFANSEVSGHKKMSVEEQLKRF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAEA 240
            +  +   G+  +L++S  ILL P       RPG+ LYGGT   K  + + ++ V+T  +
Sbjct: 181 DSGSAGLPGVR-NLSNSGAILLHPQLRTDWVRPGVMLYGGTPGGKTAEEYGLKPVMTLSS 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I+    G+ V YG     T    I V A GYADGYP                G   
Sbjct: 240 EIIQIQNINEGDSVGYGSIFTATGPMKIGVVACGYADGYPRMA-----------PEGTHV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T      VG  + ++G ++ +D+VA A+GT  Y+L+  
Sbjct: 289 IVDGVKTRLVGRVSMDMITVDLTPVKDAHVGSKVTLWGNELPIDEVAEAAGTVGYELMCA 348

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 349 LSLR-PRI 355


>gi|213962105|ref|ZP_03390369.1| alanine racemase [Capnocytophaga sputigena Capno]
 gi|213955111|gb|EEB66429.1| alanine racemase [Capnocytophaga sputigena Capno]
          Length = 369

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 154/379 (40%), Gaps = 23/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M + E   L+I+LTAL+ N H +   L       AVVK ++YG     IA  L   G V 
Sbjct: 1   MKTEE-TTLEINLTALEKNIHYLKNRLKPTTLFLAVVKASSYGNNSVAIASHLQKKGLVN 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V    EG+ LR       I VL+   P     I   NL P + S      +      
Sbjct: 60  YFAVAYTSEGIALRKAGITLPILVLHP-QPINFNDIVKYNLEPTLYSQRIAQLFLDYAKI 118

Query: 119 GV--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVN 175
               ++P  L+ +TG NRLG  L E  +      N    ++    SHLA ++D +     
Sbjct: 119 QQLANYPVHLKCNTGLNRLGFDLSEIEETLALLKNNTTVKVKTAYSHLAASEDMNEKEFT 178

Query: 176 SVQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q+  F              +     ++SGIL  P   F + R GI +YG  + +    
Sbjct: 179 ENQINTFIAFQEKINKTFTHKVIYHQCNTSGILNYPQAQFDMVRCGIGMYGFANDVKLQQ 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +  ++T ++ I  +     GE + Y         +  A   +G+ADG            
Sbjct: 239 YLTPIMTLKSVISQLHTLQIGESLGYNRGYIADHITRTATIPVGHADGINRIYG------ 292

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                  G  FI G    I+G + MDM + D+T+  S + GD + +F      + +A ++
Sbjct: 293 ----KGKGFVFINGKKASIIGNVCMDMILVDVTEI-SCQEGDEVIVFDKTHTAETLAESA 347

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+L+  +  R  + Y
Sbjct: 348 GTISYELITSMAHRIKRIY 366


>gi|116072169|ref|ZP_01469437.1| alanine racemase [Synechococcus sp. BL107]
 gi|116065792|gb|EAU71550.1| alanine racemase [Synechococcus sp. BL107]
          Length = 375

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 107/380 (28%), Positives = 179/380 (47%), Gaps = 24/380 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           +  +   +++   A+K N  ++   L+      AVVK + YG G   +A A  + G    
Sbjct: 5   NPRQRAWVEVSPAAIKANAGALCQHLTPGTELMAVVKADGYGHGAVTVANAALDGGAASL 64

Query: 61  FVTSVEEGVKLRLYTPQARI-FVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSC 118
            V +++EG++LR    +A I  +     P   +   +  L+P +SS+      ++     
Sbjct: 65  GVATLQEGLELRQAGLKAPILLLSNLCDPEDLRTCLEWQLMPTLSSLADAKLCHALAEDS 124

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G      L++DTG +RLG +L +  + T    + K   L  I SHLACADD +  V   Q
Sbjct: 125 GRRFQVQLKIDTGMSRLGCALDDGAETTQAIQHLKNLDLKGIYSHLACADDRNITVTQQQ 184

Query: 179 LERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PM 232
            +RF+++I        G+   LA+S+G LL PN H+ L R G++LYG     + S   P+
Sbjct: 185 RQRFQSVIETLPQQGTGLCRHLANSAGTLLEPNLHYDLVRVGLALYGHAPADHLSDIVPL 244

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           ++ +   A++ LIR+  AG  VSYG Q        +AV AIGYADG   +LSG       
Sbjct: 245 RSALAVRAKVTLIREIKAGTGVSYGHQYISPNSRRLAVVAIGYADGVLRSLSGQI----- 299

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD----DVAL 348
                 +   +   +P +G ITMD  + D TD+  +  G  + + G D  ++    + + 
Sbjct: 300 ------QVLHRDKRLPQVGAITMDQLLIDATDAPELHPGSIVTLLGRDQNVEISPQNWSD 353

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
              +  +++L     R  + 
Sbjct: 354 RCQSIPWEILCGFKHRLPRV 373


>gi|225869174|ref|YP_002745122.1| alanine racemase [Streptococcus equi subsp. zooepidemicus]
 gi|259710074|sp|C0MEB7|ALR_STRS7 RecName: Full=Alanine racemase
 gi|225702450|emb|CAX00342.1| alanine racemase [Streptococcus equi subsp. zooepidemicus]
          Length = 366

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     ++DL A++ N   +        +T AVVK NAYG G   ++ A+ +  V
Sbjct: 1   MISSLHRPTVARVDLEAIQANIDKIQRHLPKKVKTYAVVKANAYGHGAVAVSKAVEDQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  I   + ++     L   ++S+  L    K   
Sbjct: 60  DGYCVSNLDEALELRQAGIDKEILILGVILASELQLAIKHQLTITVASLEWLELAKKESV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+      +   +  +    QL  I +H A AD+    +   
Sbjct: 120 DFSQLHVHVKVDSGMGRIGVRSLAEANQLISILSDMGVQLDGIFTHFATADESDHAMFDK 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           QL  F+ L+       A +   +S+  L      F   R GI +YG     N      P+
Sbjct: 180 QLTFFKQLVEQLDKRPALVHASNSATSLWHSETIFSAIRLGIVIYGLNPSGNSLSLPCPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+R++ +++  AG+ V YG          +    IGYADG+   + G       
Sbjct: 240 KEALSLESRLVHVKQIQAGDSVGYGASYVAAEPEYVGTLPIGYADGWTRNMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  ++G    I+G+++MD     +T +    +G  + + G      I   DVA 
Sbjct: 294 ------KVLVEGEFCDIIGRVSMDQLTIRLTKAYP--IGTKVTLIGQQGKQVITATDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 YRGTINYEVLCLLSDRIPREY 366


>gi|297589866|ref|ZP_06948506.1| alanine racemase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576994|gb|EFH95708.1| alanine racemase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437516|gb|ADQ76587.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 390

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 21  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 81  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 140

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q  RF+ +++
Sbjct: 141 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYHRFKDMVN 199

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 200 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 260 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 307

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 308 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 365

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 366 CNLSRRLPRIY 376


>gi|209546891|ref|YP_002278809.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209538135|gb|ACI58069.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 377

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 185/365 (50%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++    R  AVVK NAYGLG E++A  LY  G + FFV    E 
Sbjct: 23  LTIDLAALGRNYRKLVSMLAPVRAGAVVKANAYGLGAERVATTLYGEGCRHFFVAQFVEA 82

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           V+LR      A+IFVL G+ PG E    +  ++PV++S+ Q   + +         P  L
Sbjct: 83  VRLRPTLARDAQIFVLNGLQPGNEIACAERGIVPVLNSLTQWRQWSATARMLKRCLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +      +    ++  I+SHLA ADD  S  N  QL     + 
Sbjct: 143 QFDTGMSRLGFPEEERSELAAALGDGSNVEILFIMSHLASADDMESDQNGEQLAEMARIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG      ++PM+ VV+ +  ++  R
Sbjct: 203 DEFPGFDISFANSGGVFLGDAYHGVLARPGIALYGGAPHAGGNNPMEPVVSLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG     R   +A  A GYADG P +L              G  +     
Sbjct: 263 TVPAGAKVGYGGAHVTQRKMRLATIAAGYADGLPRSLGDR-----------GAVYYNDIR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    D++      + +G  +++ G +  L+ +A  +GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDVSALPEGALTLGSLVEVLGSNQTLEHIARDAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y K Y
Sbjct: 372 YDKQY 376


>gi|319939813|ref|ZP_08014169.1| alanine racemase [Streptococcus anginosus 1_2_62CV]
 gi|319811026|gb|EFW07341.1| alanine racemase [Streptococcus anginosus 1_2_62CV]
          Length = 368

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 154/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  +DL A++ N   + A    N    AVVK +AYG G   +  +   + V
Sbjct: 1   MKTSNHRPTKAIVDLAAIRFNIKQITAHIPDNVEKWAVVKADAYGHGAVAVTQS-IESIV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E V+LR      +I VL         +  +  +   ++S+  L    +   
Sbjct: 60  DGFCVSNIDEAVELREAGISKKILVLGVSDVSAISLAIERKVTCTVASLEWLDLLLQSNI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+G    +      +   +   Q+  I +H A AD+  +H    
Sbjct: 120 DVAGLIVHIKIDSGMGRIGFRDSQEAQEAIHRLTQAGAQVEGIFTHFATADEADTHKFEA 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL RF+ ++   + +   +   +S+  L          R G  +YG       +   + M
Sbjct: 180 QLARFKEILGQLETVPPIVHASNSATTLWHAETVMNAVRLGDIIYGLNPSGRTLQLPYEM 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + ++ +++  AG  V YG          I    +GYADG+   + G D     
Sbjct: 240 KPALSLVSELVHVKQLEAGADVGYGATYTSENSQYIGTIPLGYADGWTRDMQGFD----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                    I G   PI+G+++MD     +  S    +G  + + G      I   DVA 
Sbjct: 295 -------VLIDGQPCPIVGRVSMDQITVRLPQSYP--IGTPVVLIGESGKKSISATDVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  I  R  + Y
Sbjct: 346 KRGTINYEIVCLISDRVPRVY 366


>gi|15801412|ref|NP_287429.1| alanine racemase [Escherichia coli O157:H7 EDL933]
 gi|168750754|ref|ZP_02775776.1| alanine racemase [Escherichia coli O157:H7 str. EC4113]
 gi|168756556|ref|ZP_02781563.1| alanine racemase [Escherichia coli O157:H7 str. EC4401]
 gi|168764385|ref|ZP_02789392.1| alanine racemase [Escherichia coli O157:H7 str. EC4501]
 gi|168771082|ref|ZP_02796089.1| alanine racemase [Escherichia coli O157:H7 str. EC4486]
 gi|168777795|ref|ZP_02802802.1| alanine racemase [Escherichia coli O157:H7 str. EC4196]
 gi|168782549|ref|ZP_02807556.1| alanine racemase [Escherichia coli O157:H7 str. EC4076]
 gi|168802076|ref|ZP_02827083.1| alanine racemase [Escherichia coli O157:H7 str. EC508]
 gi|195938845|ref|ZP_03084227.1| alanine racemase [Escherichia coli O157:H7 str. EC4024]
 gi|208808683|ref|ZP_03251020.1| alanine racemase [Escherichia coli O157:H7 str. EC4206]
 gi|208815621|ref|ZP_03256800.1| alanine racemase [Escherichia coli O157:H7 str. EC4045]
 gi|208822589|ref|ZP_03262908.1| alanine racemase [Escherichia coli O157:H7 str. EC4042]
 gi|209396444|ref|YP_002270130.1| alanine racemase [Escherichia coli O157:H7 str. EC4115]
 gi|217328528|ref|ZP_03444610.1| alanine racemase [Escherichia coli O157:H7 str. TW14588]
 gi|254792667|ref|YP_003077504.1| alanine racemase [Escherichia coli O157:H7 str. TW14359]
 gi|291282205|ref|YP_003499023.1| Alanine racemase, catabolic [Escherichia coli O55:H7 str. CB9615]
 gi|20137340|sp|Q8X4I9|ALR2_ECO57 RecName: Full=Alanine racemase, catabolic
 gi|12514890|gb|AAG56041.1|AE005336_2 alanine racemase 2, catabolic [Escherichia coli O157:H7 str.
           EDL933]
 gi|187767039|gb|EDU30883.1| alanine racemase [Escherichia coli O157:H7 str. EC4196]
 gi|188015110|gb|EDU53232.1| alanine racemase [Escherichia coli O157:H7 str. EC4113]
 gi|189000041|gb|EDU69027.1| alanine racemase [Escherichia coli O157:H7 str. EC4076]
 gi|189356318|gb|EDU74737.1| alanine racemase [Escherichia coli O157:H7 str. EC4401]
 gi|189360063|gb|EDU78482.1| alanine racemase [Escherichia coli O157:H7 str. EC4486]
 gi|189365594|gb|EDU84010.1| alanine racemase [Escherichia coli O157:H7 str. EC4501]
 gi|189375882|gb|EDU94298.1| alanine racemase [Escherichia coli O157:H7 str. EC508]
 gi|208728484|gb|EDZ78085.1| alanine racemase [Escherichia coli O157:H7 str. EC4206]
 gi|208732269|gb|EDZ80957.1| alanine racemase [Escherichia coli O157:H7 str. EC4045]
 gi|208738074|gb|EDZ85757.1| alanine racemase [Escherichia coli O157:H7 str. EC4042]
 gi|209157844|gb|ACI35277.1| alanine racemase [Escherichia coli O157:H7 str. EC4115]
 gi|217318955|gb|EEC27381.1| alanine racemase [Escherichia coli O157:H7 str. TW14588]
 gi|254592067|gb|ACT71428.1| alanine racemase 2, PLP-binding [Escherichia coli O157:H7 str.
           TW14359]
 gi|290762078|gb|ADD56039.1| Alanine racemase, catabolic [Escherichia coli O55:H7 str. CB9615]
 gi|320187974|gb|EFW62641.1| Alanine racemase, catabolic [Escherichia coli O157:H7 str. EC1212]
 gi|320637335|gb|EFX07142.1| alanine racemase [Escherichia coli O157:H7 str. G5101]
 gi|320643196|gb|EFX12397.1| alanine racemase [Escherichia coli O157:H- str. 493-89]
 gi|320648133|gb|EFX16809.1| alanine racemase [Escherichia coli O157:H- str. H 2687]
 gi|320653967|gb|EFX22041.1| alanine racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320664583|gb|EFX31734.1| alanine racemase [Escherichia coli O157:H7 str. LSU-61]
 gi|326342729|gb|EGD66499.1| Alanine racemase, catabolic [Escherichia coli O157:H7 str. 1044]
 gi|326346421|gb|EGD70158.1| Alanine racemase, catabolic [Escherichia coli O157:H7 str. 1125]
          Length = 356

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  ++D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|184200309|ref|YP_001854516.1| alanine racemase [Kocuria rhizophila DC2201]
 gi|183580539|dbj|BAG29010.1| alanine racemase [Kocuria rhizophila DC2201]
          Length = 645

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 85/393 (21%), Positives = 152/393 (38%), Gaps = 46/393 (11%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             +DL A+++N   +  L+      AVVK NAYG G  ++A A   AG        V E 
Sbjct: 17  AVVDLAAVRHNVGRLLELARGRTLIAVVKANAYGHGAPQVARAALEAGAHMLGTAHVSEA 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR     A +                 ++   +S        +     G      L++
Sbjct: 77  LALRAEGITAPVLAWLHTPSTDFAAAVREDVRLGVSGGELDAVLAAAREAGRPAVVHLKL 136

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLERFRTL 185
           D+G  R G + ++           +      +  I +HLA AD+P+    + QL    T 
Sbjct: 137 DSGLGRNGATPEQWPALVRRVREAEGEGLLSVEGIFTHLAVADEPARPETAEQLATLTTA 196

Query: 186 I--SHYKGIEASLASSSG--------ILLGPNYHF-QLTRPGISLYGGTDKIN---KSHP 231
           +  +   G+  ++  ++             P+       R G+ LYG +   +   +   
Sbjct: 197 VRTAREAGLSPTMVHAANTPGLLSAADREDPDAILRDAVRVGLGLYGLSPFADRTPEDFG 256

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   +T   R+  ++   AG  VSYG   +    + +A+  +GYADG P           
Sbjct: 257 LVPAMTLRTRVANVKDVPAGAGVSYGLTYRTEGPTRLALIPLGYADGVPR---------- 306

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS---------------LSIEVGDYIQI 336
             V  G    I   + P++G+I MD  + D++ S                ++ +GD   +
Sbjct: 307 --VATGAPVRIGNRLHPVVGRIAMDQCVVDLSRSRPVTEAAGKPGAAREPTVRIGDEAVL 364

Query: 337 F--GPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           F  G +  + D A A+GT NY+++ R+  R  +
Sbjct: 365 FGAGSNPSVTDWADAAGTINYEVVTRLSPRVPR 397


>gi|238025116|ref|YP_002909348.1| alanine racemase [Burkholderia glumae BGR1]
 gi|237879781|gb|ACR32113.1| Alanine racemase [Burkholderia glumae BGR1]
          Length = 375

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+++N   +   +   R  AVVK NAYG G E+I PAL +       +  
Sbjct: 3   RPIVAQIRPAAVRHNLAIIRRKAAGTRIWAVVKANAYGHGIERIYPALAD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L G+    +  + D   + V     +                
Sbjct: 61  LDEAVRVRELGWTRPVLLLEGLFDASDVAVADRYRLTVAVHGEEQLDMLASARPSRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          +++H A AD+      + Q ++F  
Sbjct: 121 QLKMNSGMNRLGFRPSAFRAAWERASATPAVGRIALMTHFANADEGE---VAWQTQQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G E SL++S+ +L  P+ H    RPG  LYG +            +   +T  +
Sbjct: 178 ATEGLPG-ERSLSNSAAVLWHPDAHRDWVRPGTILYGASPTGATRHIADTGLVPAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 RLIGVQTIEENETVGYGRRFAAKRTMRIGVVACGYADGYPRHAQ-----------TGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T   +  VG  ++++G  +++DDVA ASGT  Y+L+  
Sbjct: 286 AVDGIVTRVVGRVSMDMLTVDLTPCPNARVGSSVELWGEQVRVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           I  R  
Sbjct: 346 IARRVP 351


>gi|162146534|ref|YP_001600993.1| alanine racemase, catabolic [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785109|emb|CAP54653.1| putative alanine racemase, catabolic [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 387

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 132/366 (36%), Positives = 181/366 (49%), Gaps = 13/366 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L IDL A+  N+  +    G      A VK +AYGLG  +I P L  AG   FFV  + E
Sbjct: 19  LTIDLDAVAANYRILRDRVGPRTICGAAVKADAYGLGAARIVPVLAEAGCHTFFVAHLAE 78

Query: 68  GVKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYA 125
           G  +R L    A IFVL G  PG E  + +  L+PV++S+ Q+  +  L    G   P A
Sbjct: 79  GAAIRPLLGTDATIFVLNGAMPGTEAALHEHGLVPVLNSLEQIARWRDLARQAGRDLPAA 138

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQVD+G +R GLS  +         +       L++SHLACAD+P+   N  Q   F  L
Sbjct: 139 LQVDSGMSRFGLSDADVDALAARDGSLAGITPLLVMSHLACADEPAHPANHAQRAAFLRL 198

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            +      ASLA+SSG+ +G ++HF + RPG +LYG        +PMQ VV  +ARI+  
Sbjct: 199 RARLPAAPASLAASSGLFMGSDWHFDMVRPGAALYGINPTPGWPNPMQPVVRLQARIVQT 258

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G  V YG      R S IA  A+GY DG+P    G      P             
Sbjct: 259 RWIGPGTAVGYGAAFIADRPSRIATLAVGYGDGFPRAAGGHGHAVLPERPAA-------- 310

Query: 306 MVPILGKITMDMTMFDITDSLSI--EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
            +PI+G+I+MD    D+TD      + G  + + GP   +D  A A+GT  Y+LL  +G 
Sbjct: 311 KLPIIGRISMDCLAVDVTDISDAPLDAGTALDLIGPHHSIDSAAAAAGTIGYELLTGLGA 370

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 371 RYHRLY 376


>gi|260171780|ref|ZP_05758192.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides sp. D2]
 gi|315920092|ref|ZP_07916332.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693967|gb|EFS30802.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 846

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 151/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++  +   +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 487 LEVNLGAMVANLNHYRSMLRHSETKVICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 546

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 547 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 605

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 606 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSPQFDAFTREQIELFE 665

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P+  F + R GI LYG +   N    +  V T 
Sbjct: 666 KGSQELQAAFSHKILRHICNTAGIERFPDAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 723

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 724 KTTILQIRDVPQEDTVGYSRMGHLARPSRIAAIPIGYADGLNRHLG----------RGNA 773

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 774 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 832

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 833 TSISTRVKRVY 843


>gi|191168521|ref|ZP_03030307.1| alanine racemase [Escherichia coli B7A]
 gi|309794276|ref|ZP_07688700.1| alanine racemase [Escherichia coli MS 145-7]
 gi|190901419|gb|EDV61182.1| alanine racemase [Escherichia coli B7A]
 gi|308122181|gb|EFO59443.1| alanine racemase [Escherichia coli MS 145-7]
          Length = 356

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGAVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|311031137|ref|ZP_07709227.1| alanine racemase [Bacillus sp. m3-13]
          Length = 389

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 89/384 (23%), Positives = 151/384 (39%), Gaps = 29/384 (7%)

Query: 1   MHS-NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S +    +++DL  +  N  ++    + +    AVVK NAYG G  ++A     AG +
Sbjct: 1   MSSFHRDTWVEVDLDCIYENVQAIQEHVTKDVTVIAVVKANAYGHGDVQVANVALEAGAK 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
              V+ ++E + LR     A I VL         +    ++   +     +   +     
Sbjct: 61  YLAVSFLDEAMSLRQQGITAPILVLGASRVSDLPLAAKEDITLTVFQKEWVEEATSAYQG 120

Query: 119 GVSHPYALQVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  L++DTG  R    + +E              Q+  I +H A AD+  S     
Sbjct: 121 TEVVKLHLKLDTGMGRIGARTQEEVAQILELIDKAPNLQIEGIYTHFATADELQSSYVEQ 180

Query: 178 QLERFRTLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKS 229
           Q ERF +L++              +S+  L  P   F   R GI++YG T     +    
Sbjct: 181 QFERFHSLLNQVTNQYSIPMIHCGNSATTLRFPTRIFNAVRVGIAMYGLTPSLEMEPELP 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            P++   +   +++ ++K   GE VSYG       +  I    +GYADG+   L G++  
Sbjct: 241 FPLKEAFSLHTKLVHVKKLSIGESVSYGATYTTKEEEWIGTVPVGYADGWIRKLQGMNI- 299

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       + G   PI+G+I MD  M  +   L   +G  + + G      I  +D
Sbjct: 300 -----------LVDGKFAPIVGRICMDQFMVKLPHELP--IGTKVTLIGKQDGKKISSND 346

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           VA    T NY++   I  R  + +
Sbjct: 347 VAAKLDTINYEVPCMISYRVPRMF 370


>gi|19746744|ref|NP_607880.1| alanine racemase [Streptococcus pyogenes MGAS8232]
 gi|50914870|ref|YP_060842.1| alanine racemase [Streptococcus pyogenes MGAS10394]
 gi|23813643|sp|Q8NZK4|ALR_STRP8 RecName: Full=Alanine racemase
 gi|73921670|sp|Q5XAA4|ALR_STRP6 RecName: Full=Alanine racemase
 gi|19748973|gb|AAL98379.1| putative alanine racemase [Streptococcus pyogenes MGAS8232]
 gi|50903944|gb|AAT87659.1| Alanine racemase [Streptococcus pyogenes MGAS10394]
          Length = 366

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + K+     +   ++S+  L    +   
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELKLAITRQVTVTVASLEWLAMAKQEWP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+GL     +D            +  I +H A AD+      + 
Sbjct: 120 DLKGLKVHIKIDSGMGRIGLRSVTEVDNLIAGLKSMGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     ++ +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLSKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|302346993|ref|YP_003815291.1| alanine racemase [Prevotella melaninogenica ATCC 25845]
 gi|302151125|gb|ADK97386.1| alanine racemase [Prevotella melaninogenica ATCC 25845]
          Length = 826

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 153/371 (41%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFLKPTTKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR     + I ++        K +FD +L P + S   +     +         P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMTS-FKTLFDYDLEPEVYSFRLMDALVKAAQKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   Q +  +       +       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPQKDMDELIKRLKQQNAIIPRSVFSHFVGSDADNFDEFSAHQFALFD 645

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +SSGI   P     + R G+ LYG   + NK+    +  T 
Sbjct: 646 EGSKKLQAAFSHKIIRHMDNSSGIEHFPERQMDMCRLGLGLYGINPRTNKTINNIS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  + RDS+IA   IGYADG    L               
Sbjct: 704 KTTILQLRNVPAGDTVGYSRKGTIDRDSVIAAIPIGYADGLNRHLGNRHC---------- 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDTLDTIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 813 TTISNRVKRVY 823


>gi|163853336|ref|YP_001641379.1| alanine racemase [Methylobacterium extorquens PA1]
 gi|163664941|gb|ABY32308.1| alanine racemase [Methylobacterium extorquens PA1]
          Length = 342

 Score =  265 bits (678), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 116/352 (32%), Positives = 180/352 (51%), Gaps = 14/352 (3%)

Query: 18  NNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
            NW ++ A +  A   AVVK +AYG G   +APAL+ AG + FFV  + EG+  R   P+
Sbjct: 3   ANWRALGACAPQAECGAVVKADAYGCGLAAVAPALWRAGCRTFFVAHLSEGIAARKILPE 62

Query: 78  ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
           A ++VL G+ PG+ +      L PV+    +L  +++ M         +  DTG NRLGL
Sbjct: 63  AALYVLNGLPPGRAEAFRAHRLRPVLGDAQELAEWAEAMQGAGPAALHV--DTGMNRLGL 120

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
           S+ EAL    +    + G    ++SHL  A+ P   +N+ Q   F  + + +  + ASLA
Sbjct: 121 SVAEALALAGDPVIARAGIDL-VMSHLVSAERPGDPLNARQAADFARVRAAFPQMRASLA 179

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +SSG  L  +    L RPG +L+GG     + +PM+ VV  EA I+ +R   AG    Y 
Sbjct: 180 NSSGTCLANDARHDLLRPGYALFGGNPDPGQPNPMRPVVRLEATILQVRDVEAGATCGYN 239

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            + +      +A  ++GYADGYP + S             G   + G   PI+G I+MD+
Sbjct: 240 ARWQAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGVPCPIVGLISMDL 288

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + D+TD+     G    + G  + +D V  A+GT  Y++L  +G+RY + Y
Sbjct: 289 IILDVTDATQARRGGTATLIGDSLDIDTVGHAAGTIGYEILTSLGSRYVRNY 340


>gi|254823094|ref|ZP_05228095.1| alanine racemase [Mycobacterium intracellulare ATCC 13950]
          Length = 391

 Score =  265 bits (678), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+ +N   +   +G A+  AVVK + YG G  + A A   AG  +  V +V
Sbjct: 16  LAEALVDLGAIAHNVRLLCEQAGGAQVMAVVKADGYGHGAAQTARAALAAGAAELGVATV 75

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR    +A +                 ++   +SS  Q       +   G +   
Sbjct: 76  DEALALRADGVRAPVLAWLHPPGFDFGPALLADVQIAVSSERQLDELLDAVRRTGRTATV 135

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+  +           +  +    L  ++SH+  AD P++ VN +Q +R
Sbjct: 136 TVKVDTGLNRNGVPPEHYPSMLTALRRAVAENAIVLRGLMSHMVYADQPANPVNDLQAQR 195

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++  +        A L++SS  +  P+  F + RPGI++YG +    +    +   
Sbjct: 196 FTEMLAQARDQGVRYEAAHLSNSSATMSRPDLAFDMVRPGIAVYGLSPVPERGDMGLIPA 255

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L            
Sbjct: 256 MTVKCPVALVKSIRAGESVSYGHTWTARRDTTLALLPVGYADGVFRSLGNRL-------- 307

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 308 ---EVLINGRRRPGVGRICMDQFVVDLGPGPTDVAEGDEAILFGPGASGEPTAQDWADLL 364

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 365 GTIHYEVVTSPRGRITRTY 383


>gi|120402493|ref|YP_952322.1| alanine racemase [Mycobacterium vanbaalenii PYR-1]
 gi|166969421|sp|A1T566|ALR_MYCVP RecName: Full=Alanine racemase
 gi|119955311|gb|ABM12316.1| alanine racemase [Mycobacterium vanbaalenii PYR-1]
          Length = 390

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 157/381 (41%), Gaps = 26/381 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                  IDL A+ +N   +   +G A   AVVK + YG G  ++A A   AG  +  V 
Sbjct: 13  QALPTASIDLDAIAHNVAVLREHAGPAAVMAVVKADGYGHGATQVARAALAAGAAELGVA 72

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           +V E + LR     AR+                 ++   +SS+ Q T         G + 
Sbjct: 73  TVGEALALRRDGVTARVLAWLHPPGTDFAPALLADVDVAVSSLRQFTDLLDAAGRTGRTA 132

Query: 123 PYALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              ++ DTG +R G+   +          + +    ++  ++SHLA  DDP    N VQ 
Sbjct: 133 DVTVKADTGLSRNGVGEADYPALVDALRRAASDGAVRVRGLMSHLAHGDDPEHPFNDVQA 192

Query: 180 ERFRTL--ISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQ 233
            R   +  ++  +G+      L++S   L  P+  F + RPGI++YG T    +    ++
Sbjct: 193 RRLTEMAKLAGARGVSYDVVHLSNSPAALTRPDLAFDMVRPGIAVYGQTPIPQRGDFGLR 252

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T +  +  +R   AG+ VSYG       D+ +A+   GYADG    LS         
Sbjct: 253 PAMTVKCPVSAVRPVRAGDAVSYGHTWTAQTDTTLALVPAGYADGVFRALSNRF------ 306

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVAL 348
                +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A 
Sbjct: 307 -----EVSINGRRYPNVGRICMDQFVVDLGPGPVDVAEGDDAILFGPGTDGEPTAQDWAE 361

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY+++     R  + Y
Sbjct: 362 LLDTINYEVVTSPRGRIVRTY 382


>gi|320659446|gb|EFX27015.1| alanine racemase [Escherichia coli O55:H7 str. USDA 5905]
          Length = 356

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  ++D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L      +         ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLWAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|332363340|gb|EGJ41125.1| alanine racemase [Streptococcus sanguinis SK49]
          Length = 369

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 146/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIDFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDNVPPLVHASNSATSLWHSEIVLNAVRLGDIIYGLNPSGTVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I + DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVRLPQAYPL--GTPVALIGNSGAETITVTDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|82751673|ref|YP_417414.1| alanine racemase [Staphylococcus aureus RF122]
 gi|82657204|emb|CAI81644.1| alanine racemase 1 [Staphylococcus aureus RF122]
          Length = 382

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 153/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L     +            +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISDEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H  CAD+    + + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFVCADE-PGDMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVVGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|170735828|ref|YP_001777088.1| alanine racemase [Burkholderia cenocepacia MC0-3]
 gi|169818016|gb|ACA92598.1| alanine racemase [Burkholderia cenocepacia MC0-3]
          Length = 373

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAA--ADGIGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L G+    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGVFEPADVELADRHRLTVAVHCDEQLDLLIAAKPRQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + N        ++ H A AD+        QL++F  
Sbjct: 121 QLKMNSGMNRLGYRPAAFRAAWERAANAPSIGKITLMMHFANADEGE---VDWQLDQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S+++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 TTAGIPG-ERSVSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLSS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPDETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSRVELWGDQVKVDDVAQASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|109900323|ref|YP_663578.1| alanine racemase [Pseudoalteromonas atlantica T6c]
 gi|122971491|sp|Q15NL4|ALR_PSEA6 RecName: Full=Alanine racemase
 gi|109702604|gb|ABG42524.1| alanine racemase [Pseudoalteromonas atlantica T6c]
          Length = 375

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 107/383 (27%), Positives = 176/383 (45%), Gaps = 31/383 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS----------GNARTAAVVKDNAYGLGCEKIAPALYN 54
             + + +DL A++ N+   NAL             + T AV+K +AYG G    A AL N
Sbjct: 3   RPISITVDLDAIRQNFAYANALGVNALESSINDRQSNTLAVIKADAYGHGAVATARAL-N 61

Query: 55  AGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYS 113
                  V+S+EE V LR +  +  I +L G   P +  ++ + NL  VI +  Q+    
Sbjct: 62  GQAALLAVSSIEEAVSLRQHHIKTPILLLEGCFCPSELSVVNELNLQIVIHNQKQIEDLL 121

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             +         L+VDTG +RLG+ + +AL       + K     ++++H A +D P   
Sbjct: 122 AQVLT-KPIKVWLKVDTGMHRLGIPVSDALKAYTQLASSKNVCSVMLMTHFATSDHPDHP 180

Query: 174 VNSVQLERFRTLISHYKGIE----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
           +   Q++  + L             SLA+S+ +L  P       RPGI LYG +      
Sbjct: 181 LLLSQIQSIQKLAEKVSAEPSYAGCSLANSAALLATPKSISTWNRPGIMLYGISPFNQSD 240

Query: 230 ---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
               P+   +T  +++I +R+   GE V YG      R S+IA  A GY DGYP      
Sbjct: 241 INVLPLIPAMTFSSKVIALRRVATGESVGYGAIWTAKRPSIIATVAAGYGDGYPR----- 295

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                 +   G    + G + P+ G+++MDM   D+T    I  G  ++++G +I ++DV
Sbjct: 296 ------TAKSGTPVMVNGQIAPLAGRVSMDMLCVDVTQLTDISEGSPVELWGKNIPVNDV 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  + T  Y+L+ R+ TR  + +
Sbjct: 350 AAWADTLGYELVTRMPTRAKRVF 372


>gi|170681793|ref|YP_001744011.1| alanine racemase [Escherichia coli SMS-3-5]
 gi|300939584|ref|ZP_07154241.1| alanine racemase [Escherichia coli MS 21-1]
 gi|170519511|gb|ACB17689.1| alanine racemase [Escherichia coli SMS-3-5]
 gi|300455588|gb|EFK19081.1| alanine racemase [Escherichia coli MS 21-1]
          Length = 356

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|94994987|ref|YP_603085.1| alanine racemase [Streptococcus pyogenes MGAS10750]
 gi|166969432|sp|Q1J545|ALR_STRPF RecName: Full=Alanine racemase
 gi|94548495|gb|ABF38541.1| Alanine racemase [Streptococcus pyogenes MGAS10750]
          Length = 366

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + K+     +   ++S+  L    +   
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELKLAITRQVTVTVASLEWLAMAKQEWP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+GL     +D           ++  I +H A AD+      + 
Sbjct: 120 DLKGLKVHIKIDSGMGRIGLRSVTEVDNLIAGLKSMGAEVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHASNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD     +  +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEIIGRVSMDQLTIRLPKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|307707071|ref|ZP_07643868.1| alanine racemase [Streptococcus mitis SK321]
 gi|307617597|gb|EFN96767.1| alanine racemase [Streptococcus mitis SK321]
          Length = 367

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 159/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKFAVVKANAYGHGAVAVATAIQDE-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      RI +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKRILILGVSEIEAVSLAKEYDITLTVAGLEWIQVLLDKEADLAGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREAGEAEQAQDLLKEHGAGVEGIFTHFATADEESDTYFNEQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  KG+      ++S+  L      F   R G ++YG       ++  + ++  +T
Sbjct: 185 KTILASMKGLPELIHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLKPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESAMVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|167752890|ref|ZP_02425017.1| hypothetical protein ALIPUT_01152 [Alistipes putredinis DSM 17216]
 gi|167659959|gb|EDS04089.1| hypothetical protein ALIPUT_01152 [Alistipes putredinis DSM 17216]
          Length = 790

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 164/373 (43%), Gaps = 24/373 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL A+ +N +     L    R  A+VK  +YG G  ++A  L + GV    V   +E
Sbjct: 429 LEVDLDAMIHNLNYFRARLRPGVRLVAMVKAASYGAGDFEVAQMLQHQGVNYLAVAFADE 488

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR    +  I VL     G   ++    L P I +   L F+  +       S+P  
Sbjct: 489 GVLLRERGIRMPIVVLNA-DEGSFDLMVAHRLEPEIYNFRSLAFFSKAVERVGEESYPIH 547

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFRT 184
           +++DTG +RLG    E    T         +++ I SHL C+D P        Q+ RF  
Sbjct: 548 IKLDTGMHRLGFMEGELDMLTETLGETPSVKVATIFSHLNCSDMPQEDRYTREQIARFDR 607

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +           +    A+S+ I   P   F + R G+ LYG   + N      +  T +
Sbjct: 608 MSGRLAAALPYPVLRHTANSAAIERFPEAQFDMCRLGLGLYGFGFEHNDELKPVS--TLK 665

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +RI+ ++   AGE V YG   KLTRDS+ A   +GYADG    L                
Sbjct: 666 SRIVQLKHLSAGEAVGYGRAGKLTRDSVTATVPMGYADGLDRHLGCGRWS---------- 715

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG--PDIKLDDVALASGTTNYDL 357
             + G   PI+G++ MD  M D+TD   +E GD + IF   P    +D+A    T  Y++
Sbjct: 716 MLVAGRPAPIVGRVCMDSCMIDVTDIPGVEEGDEVVIFSAVPGNTPEDMARVLDTIPYEV 775

Query: 358 LVRIGTRYAKFYT 370
           +  +  R  + Y+
Sbjct: 776 MTSVSGRVKRIYS 788


>gi|3913032|sp|O30746|ALR2_KLEAE RecName: Full=Alanine racemase, catabolic
 gi|2360966|gb|AAC38140.1| alanine racemase [Klebsiella aerogenes]
          Length = 356

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 157/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL AL+ N   +   +  +R  AV KDNAYG G  ++  AL       F + +
Sbjct: 3   RPVVASIDLLALRQNLQIVRRAAPGSRLWAVDKDNAYGHGVARVWSALSA--ADGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     E  + D   +P            +          
Sbjct: 61  LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLPTSVHSNWQIKALQQAKLRAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A++P   V  ++      
Sbjct: 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---E 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    GE + YGG  + T++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQNLRPGEAIGYGGLYRTTQEQRIGIVACGYADGYPR-----------VAPSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T      +G  ++++G +IK+DDVA +SGT  Y+L+  
Sbjct: 287 LVDGVRTTTVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|254563262|ref|YP_003070357.1| alanine racemase [Methylobacterium extorquens DM4]
 gi|254270540|emb|CAX26543.1| putative alanine racemase (alr-like) [Methylobacterium extorquens
           DM4]
          Length = 342

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 116/352 (32%), Positives = 179/352 (50%), Gaps = 14/352 (3%)

Query: 18  NNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
            NW ++ A +  A   AVVK +AYG G   +APAL+ AG + FFV  + EG+  R   P+
Sbjct: 3   ANWRALGACAPQAECGAVVKADAYGCGLAAVAPALWRAGCRTFFVAHLSEGIAARKILPE 62

Query: 78  ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
           A ++VL G+ PG  +      L PV+    +L  +++ M         +  DTG NRLGL
Sbjct: 63  AALYVLNGLPPGHAEAFRAHRLRPVLGDAQELAEWAEAMQGAGPAALHV--DTGMNRLGL 120

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
           S+ EAL    +    + G    ++SHL  A+ P   +N+ Q   F  + + +  + ASLA
Sbjct: 121 SVAEALALAGDPVIARAGIDL-VMSHLVSAELPDDPLNTRQAADFARVRAAFPQMRASLA 179

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +SSG  L  +    L RPG +L+GG     + +PM+ VV  EA I+ +R   AG    Y 
Sbjct: 180 NSSGTCLANDARHDLLRPGYALFGGNPDPGQPNPMRPVVRLEATILQVRDVEAGATCGYN 239

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            + +      +A  ++GYADGYP + S             G   + G   PI+G I+MD+
Sbjct: 240 ARWQAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGVPCPIVGLISMDL 288

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + D+TD+     G    + G  + +D V  A+GT  Y++L  +G+RY + Y
Sbjct: 289 IILDVTDATQARRGGTATLIGDALDIDTVGQAAGTIGYEILTSLGSRYVRDY 340


>gi|227509299|ref|ZP_03939348.1| alanine racemase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191229|gb|EEI71296.1| alanine racemase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 374

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 146/381 (38%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              RL I+  A+ NN  +    +        VVK N YG G  ++A    NAG + F V 
Sbjct: 7   RNARLIINQKAIYNNVKNAVTHTQSGTDLFVVVKANGYGHGAVQVARIAENAGAKGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT---FYSKLMSCGV 120
            +EEG++LR       I VL    P    I  D+++   +SS   L              
Sbjct: 67  LLEEGLELRQAGFTEPILVLGITEPTFAPIARDSHISLTVSSEEWLKTAGIILNQQDSKE 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
                L +DTG  R+G    + L        K         I +H A AD         Q
Sbjct: 127 KLHVHLAMDTGMGRIGFQTPDELQEAMLVLKKYQDTFDFEGIFTHFATADSKDDTYFQYQ 186

Query: 179 LERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
            E ++ +++    +     +A+++  L        + R GIS YG      +     + +
Sbjct: 187 YENYQKMLAVVDKRPKYVHVANTATSLWHKVCGANMVRYGISTYGLNPSGKEITRTPYTL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ +A +  ++K   G+ + YG   +   D  I    IGYADG+P  + G       
Sbjct: 247 FPAMSFQAGLSYVKKVPKGKSIGYGATYQTKEDEWIGTVPIGYADGFPRKMQGFS----- 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                    + G   PI+G++ MD  M  +           + I G     +I +DD+A 
Sbjct: 302 -------VLVDGQYCPIVGRVCMDQFMIKLPKQYG--TDTVVTIIGKSGAHEITVDDIAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++     R  + Y
Sbjct: 353 QLGTINYEVVCGFSERLQRKY 373


>gi|262282055|ref|ZP_06059824.1| alanine racemase [Streptococcus sp. 2_1_36FAA]
 gi|262262509|gb|EEY81206.1| alanine racemase [Streptococcus sp. 2_1_36FAA]
          Length = 368

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 152/381 (39%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  +DL+A+  N   + A    +    AVVK NAYG G   ++  + +  V
Sbjct: 1   MKTSIHRPSQALVDLSAIHFNIQQLKAHLPQDVEKWAVVKANAYGHGAVVVSSYIDDI-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR      +I +L         +  +  +   ++S+  L        
Sbjct: 60  DGFCVSNIDEALELREGGLDKKILILGVSAIEVVPLAIEHKITLTVASLEWLDLLEASGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G    ++L    N       Q+  I +H A AD+  +     
Sbjct: 120 SLQGLVVHLKVDSGMGRIGFRDSQSLQIAINRLQSAGVQVEGIFTHFATADEADASKFEE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+ +++    +   +   +S+  L   +      R G  +YG       +   + +
Sbjct: 180 QLACFKGILAELDALPPIIHASNSATSLWHADTVMNAVRLGDIIYGLNPSGSALELPYDI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + ++ +++  AG  V YG          I    +GYADG+   + G D     
Sbjct: 240 KPALSLVSELVHVKEVEAGADVGYGATYTADEGQFIGTIPLGYADGWTRDMQGFD----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    I G   PI+G+++MD     +     +  G  +   G      I   DVA 
Sbjct: 295 -------VLIDGQRCPIVGRVSMDQITVRLPKKYPL--GTPVVFIGKSGTESISATDVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  I  R  + Y
Sbjct: 346 KRGTINYEVVCLISDRVPRIY 366


>gi|84497889|ref|ZP_00996686.1| putative alanine racemase [Janibacter sp. HTCC2649]
 gi|84381389|gb|EAP97272.1| putative alanine racemase [Janibacter sp. HTCC2649]
          Length = 391

 Score =  265 bits (677), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 88/380 (23%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + IDL A+ +N   ++  S  A   AVVK N YG G    A A    G     V    
Sbjct: 18  AWVTIDLAAIADNVRELDRRSPGAEVMAVVKANGYGHGLVPSARAAVAGGATWLAVAQFN 77

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR       +               D ++   +S+        +   + G +    
Sbjct: 78  EALDLRAAGVTTPLLTWLYAPGVDFGAAIDADIDISVSAPWALDAVVAAARARGRAARIH 137

Query: 126 LQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           ++VDTG  R G       + +        +   ++  + SH A AD P       Q +RF
Sbjct: 138 VKVDTGLGRNGALGQGWTDLIAALGPVVAEGAVEVIGVWSHFARADAPQDPTVLGQRDRF 197

Query: 183 -----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
                    +  +     LA+S+  L  PN HF L RPG+++YG +   +    +   ++
Sbjct: 198 VEAAEELERAGIRPQLRHLANSAATLTNPNAHFDLVRPGLAVYGLSPVPDLGSPQDFGLR 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   AR+ L+++A  G+ VSYG       D+++ +  IGYADG P     +       
Sbjct: 258 EAMRVTARLALVKEASTGQGVSYGHIYTTPEDTVLGLVPIGYADGIPRHAGNV------- 310

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
               G   +    + + G++ MD  + D+    +   GD + I G     +    D A A
Sbjct: 311 ----GPVKVGDRRLTVAGRVCMDQFVLDLGAGYAGGAGDEVVILGRGVDDEPTAQDWATA 366

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T NY+++ R+  R  + +
Sbjct: 367 IDTINYEIVTRMSDRLPRVF 386


>gi|146299078|ref|YP_001193669.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Flavobacterium johnsoniae
           UW101]
 gi|146153496|gb|ABQ04350.1| alanine racemase [Flavobacterium johnsoniae UW101]
          Length = 822

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 157/370 (42%), Gaps = 21/370 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L A+ +N +     L+ + +   +VK   YG G  +IA  L +  V    V   +E
Sbjct: 463 LEINLDAINHNLNYFKSKLADDVKIMVMVKAFGYGNGGLEIAKLLEHNKVNYLGVAFADE 522

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G+ L+    +  I VL          I    L P I S+  L  + K+         P  
Sbjct: 523 GISLKNGGIKLPIMVLNPESTS-FPSIIQYKLEPEIYSIKGLNAFLKIAREKNLKDFPIH 581

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRT 184
           ++VDTG +RLG       +           ++  I+SHLA +DDP        Q+  F  
Sbjct: 582 IKVDTGMHRLGFEDNTIDELIATLKGNSTVRVQSILSHLATSDDPKHFDFVEKQISLFER 641

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           L S             + ++SGI   P+  + + R GI LYG ++   +   ++ V T +
Sbjct: 642 LSSKLISELNINPIRHILNTSGISNFPDAQYNMVRLGIGLYGVSNDPAEQKYLENVGTLK 701

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  +R   AG+ V YG +    +++ IA   IGYADG                   G 
Sbjct: 702 SIISQVRTIPAGDSVGYGRRFMADKETKIATIPIGYADGISRLWGNQI----------GF 751

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             IK     I+G + MDM M D++     + GD + IFG    + ++A A  T  Y+++ 
Sbjct: 752 VTIKNQKAYIVGSVCMDMLMVDVSHI-DCKEGDSVIIFGESPTVIEMAEALKTIPYEIMT 810

Query: 360 RIGTRYAKFY 369
            I  R  + +
Sbjct: 811 SISQRVKRVF 820


>gi|298695345|gb|ADI98567.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus ED133]
          Length = 382

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 156/371 (42%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+   ++ + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGYMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|255691132|ref|ZP_05414807.1| alanine racemase [Bacteroides finegoldii DSM 17565]
 gi|260623225|gb|EEX46096.1| alanine racemase [Bacteroides finegoldii DSM 17565]
          Length = 852

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA  L    V    V   +
Sbjct: 493 LEVNLGAMVENLNHYRSMLRHPETKMICMVKASAYGAGSYEIAKTLQEHHVDYLAVAVAD 552

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     + I ++        K +FD  L P + +   L    K        + P 
Sbjct: 553 EGSELRKAGITSSIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 611

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFR 183
            +++DTG +RLG   ++         N+       + SH   +D          Q+E F 
Sbjct: 612 HVKLDTGMHRLGFEAEDIPLLIRRLKNQNAVIPRSVFSHFVGSDSPQFDAFTRQQIELFE 671

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   F + R GI LYG +   N    +  V T 
Sbjct: 672 KGSQELQAAFSHKILRHICNTAGIERFPGAQFDMVRLGIGLYGVSPIDN--SIIHNVSTL 729

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 730 KTTILQIRDVPEEDTVGYSRMGHLIRPSRIAAIPIGYADGLNRHLG----------RGNA 779

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 780 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLDTIPYEVL 838

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 839 TSISTRVKRIY 849


>gi|333005015|gb|EGK24535.1| alanine racemase [Shigella flexneri VA-6]
          Length = 356

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|323977248|gb|EGB72335.1| alanine racemase [Escherichia coli TW10509]
          Length = 356

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D   +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQYRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPEGIAGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|254524402|ref|ZP_05136457.1| alanine racemase [Stenotrophomonas sp. SKA14]
 gi|219721993|gb|EED40518.1| alanine racemase [Stenotrophomonas sp. SKA14]
          Length = 356

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L G  +  A++K +AYG G  + A AL       F V +
Sbjct: 2   RPARALIDLGALRSNYRLAREL-GGGKALAIIKADAYGHGAVRCAQAL-EGEADGFGVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A I +L GI  P    ++ + +    + S  QL   +          
Sbjct: 60  IEEALELRQSGIRAPILLLEGIFEPSDMALVAEHDFWFAVGSSWQLEALAAF-DSPRPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +RLGL +                +  ++++HLA AD+  S     Q   F 
Sbjct: 119 VWLKLDSGMHRLGLDVDSFRAAHARLSALPQVERIVLMTHLARADELDSERTHEQAATFA 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
             I    G E S+ +S  +L  P+      RPG+ LYG     +    +  ++ V+T ++
Sbjct: 179 RAIDGLSG-ETSVCNSPALLGWPDVRSDWVRPGLMLYGANPLPDNTALTERLRPVMTMQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I  R   AGE V YG +      + + V A+GYADGYP                G   
Sbjct: 238 KVIAERWIEAGEPVGYGARFVAKSRTRVGVVALGYADGYPQFAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    ++G+++MDM   D+T      +G  ++++G    L ++A   G + Y L   
Sbjct: 287 LIDGQPGGLIGRVSMDMLTVDLTAHPQAGIGSVVELWGTAPTLSELAPRCGVSAYQLPCA 346

Query: 361 IGTRYAKFY 369
           +  R A+ Y
Sbjct: 347 V-KRVARVY 354


>gi|283771238|ref|ZP_06344127.1| alanine racemase [Staphylococcus aureus subsp. aureus H19]
 gi|283459443|gb|EFC06536.1| alanine racemase [Staphylococcus aureus subsp. aureus H19]
          Length = 382

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 155/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPVKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q +RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKIKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|255994095|ref|ZP_05427230.1| alanine racemase [Eubacterium saphenum ATCC 49989]
 gi|255993763|gb|EEU03852.1| alanine racemase [Eubacterium saphenum ATCC 49989]
          Length = 382

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++I L  + +N   +  ++G ++  A+VK +AYG G  +I+  L + G+  F + +
Sbjct: 14  RSAWMEISLANILHNVKEIQKIAGKSKIIAMVKADAYGHGATEISTFLADNGIDYFAIAT 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           ++EG++LR       I +L  +      II + + +P+++S+      S+     G    
Sbjct: 74  LKEGIELRRAGLNKNIILLSPVDNYYADIIVENDFMPIVTSLDNAKALSETAKSYGKVLS 133

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG  R+G     EA+D            +  ++SHL+ + +     + +QL++F
Sbjct: 134 IMIALDTGMGRIGYLPNPEAIDEITKIAKLDDIHIKGLLSHLSSSPETDKSYSYMQLDKF 193

Query: 183 RTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
           +        KGI   +    +S  I+   +      RPGI +YG   +         ++ 
Sbjct: 194 KDFTEKLKSKGINPEIKTIANSGAIVSMRDMMLDAIRPGILIYGYFPEDTCTCDDLDLKP 253

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++ +A II +++   G   SYG +    +DS+I    +GYADGYP   SG         
Sbjct: 254 ALSVKANIIHMQRVKKGFCCSYGRKFVAKKDSIIGTIPVGYADGYPANYSG--------- 304

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               K  + G   PI G I MD+ M D+TD  + +VGD + + G D    I   D+   S
Sbjct: 305 --NAKVIVNGKTAPIAGAICMDLCMIDLTDIENSKVGDEVILLGSDGKNTITALDIEKGS 362

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           G   Y++L   G R  K +
Sbjct: 363 GMFRYEILTGFGQRLPKQF 381


>gi|227512311|ref|ZP_03942360.1| alanine racemase [Lactobacillus buchneri ATCC 11577]
 gi|227522397|ref|ZP_03952446.1| alanine racemase [Lactobacillus hilgardii ATCC 8290]
 gi|227084486|gb|EEI19798.1| alanine racemase [Lactobacillus buchneri ATCC 11577]
 gi|227090455|gb|EEI25767.1| alanine racemase [Lactobacillus hilgardii ATCC 8290]
          Length = 374

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 147/381 (38%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              RL I+  A+ NN  +    +        VVK N YG G  ++A    NAG + F V 
Sbjct: 7   RNARLIINQKAIYNNVKNAVTHTQSGTDLFVVVKANGYGHGAVQVARIAENAGAKGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT---FYSKLMSCGV 120
            +EEG++LR       I VL    P    I  D+++   +SS   L          +   
Sbjct: 67  LLEEGLELRQAGFTEPILVLGITEPTFAPIARDSHISLTVSSEEWLKTAGIILNQQASKE 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
                L +DTG  R+G    + L        K         I +H A AD         Q
Sbjct: 127 KLHVHLAMDTGMGRIGFQTPDELQEAMLVLKKYQDTFDFEGIFTHFATADSKDDTYFQYQ 186

Query: 179 LERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
            E ++ +++    K     +A+++  L        + R GIS YG      +     + +
Sbjct: 187 YENYQKMLAVVDKKPKYVHVANTATSLWHKVCGANMVRYGISTYGLNPSGKEITRTPYTL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ +A +  ++K   G+ + YG   +   D  I    IGYADG+P  + G       
Sbjct: 247 FPAMSFQAGLSYVKKVPKGKSIGYGATYQTKEDEWIGTVPIGYADGFPRKMQGFS----- 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                    + G   PI+G++ MD  M  +           + I G     +I +DD+A 
Sbjct: 302 -------VLVDGQYCPIVGRVCMDQFMIKLPKQYG--TDTVVTIIGKSGAHEITVDDIAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++     R  + Y
Sbjct: 353 QLGTINYEVVCGFSERLQRKY 373


>gi|327461776|gb|EGF08107.1| alanine racemase [Streptococcus sanguinis SK1]
          Length = 369

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALDAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGTVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRLSMDQITVRLPQAYPL--GTLVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|142822|gb|AAA22378.1| D-alanine racemase cds [Bacillus subtilis]
 gi|224732|prf||1112147A Ala racemase
          Length = 389

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/384 (26%), Positives = 166/384 (43%), Gaps = 30/384 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +  F R    +IDL+A+K N  +M    G +    AV K NAYG G  + A A  +AG
Sbjct: 1   MSTKPFYRDTWAEIDLSAIKENVSNMKKHIGEHVHLMAVEKANAYGHGDAETAKAALDAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                +  ++E + LR    +A I VL  + P    I  + ++     SV  L   ++  
Sbjct: 61  ASCLAMAILDEAISLRKKGLKAPILVLGAVPPEYVAIAAEYDVTLTGYSVEWLQEAARHT 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVN 175
             G S  + L+VDTG NRLG+  +E +       ++    +   + +H A AD+      
Sbjct: 121 KKG-SLHFHLKVDTGMNRLGVKTEEEVQNVMAILDRNPRLKCKGVFTHFATADEKERGYF 179

Query: 176 SVQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            +Q ERF+ LI+      +    A+S+  L      F   R GI +YG     + S  + 
Sbjct: 180 LMQFERFKELIAPLPLKNLMVHCANSAAGLRLKKGFFNAVRFGIGMYGLRPSADMSDEIP 239

Query: 234 TVV----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +    T  + +  ++    GE VSYG +    +D+ I    +GYADG+   L G D  
Sbjct: 240 FQLRPAFTLHSTLSHVKLIRKGESVSYGAEYTAEKDTWIGTVPVGYADGWLRKLKGTDI- 298

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       +KG  + I G+I MD  M ++        G  + + G      I +D+
Sbjct: 299 -----------LVKGKRLKIAGRICMDQFMVELDQEYP--PGTKVTLIGRQGDEYISMDE 345

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++   I +R  + +
Sbjct: 346 IAGRLETINYEVACTISSRVPRMF 369


>gi|284920994|emb|CBG34059.1| alanine racemase, catabolic [Escherichia coli 042]
          Length = 356

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLDIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLTAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|227832290|ref|YP_002833997.1| Alanine racemase [Corynebacterium aurimucosum ATCC 700975]
 gi|227453306|gb|ACP32059.1| Alanine racemase [Corynebacterium aurimucosum ATCC 700975]
          Length = 365

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 155/371 (41%), Gaps = 21/371 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+  +DL A+ +N   +      AR   VVK +AY  G E+ AP +  AG   F V ++
Sbjct: 1   MLKTTVDLNAIAHNVARVKEAVAPARLMCVVKADAYAHGIERCAPVMAQAGADAFGVATL 60

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E V LR       I                 ++   I S+        L++        
Sbjct: 61  AEAVALRKVIDNLPIAAWLWEPTEDLAPALAADIQIGIPSL---AHAQALIAAETPTEAF 117

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT- 184
           + V+TG +R G+      +      +     +  ++SH ACAD+P    N  Q   FR  
Sbjct: 118 VMVETGMHRSGVDKHVWEETFRLLADAPHITVLGLMSHFACADEPEHPHNDHQESEFRQA 177

Query: 185 -LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             ++   G+E     LA+S   L  P+  F+  R G++LYG        H ++  +T EA
Sbjct: 178 LALAREVGLECPLNHLANSPAALTRPSARFEQVRVGLALYGLEPVAGLDHGLEPAMTWEA 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            ++ ++   AGE   YG       +  +A  ++GYADG P    G             + 
Sbjct: 238 SVVAVKPISAGESTCYGLTWTAESERELATVSVGYADGLPRAFQGAL-----------QV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDLL 358
            I G + P +G++ MD  + D+  +   +  GD   IFG   +    +A A+GT NY+++
Sbjct: 287 GIGGELYPQVGRVCMDQIVVDLGSNPHGVRAGDTAVIFGRGGMSATGLAEAAGTINYEVV 346

Query: 359 VRIGTRYAKFY 369
            R   R  + Y
Sbjct: 347 CRPTGRTERTY 357


>gi|307707478|ref|ZP_07643960.1| alanine racemase [Streptococcus mitis NCTC 12261]
 gi|307616430|gb|EFN95621.1| alanine racemase [Streptococcus mitis NCTC 12261]
          Length = 367

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 159/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A  + +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPEGTLKFAVVKANAYGHGAVAVATTIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      RI +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKRILILGVSEIEVVALAKEYDITLTVAGLEWIQALLDKEADLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREAHEAEQAQDLLQQHGARVEGIFTHFATADEKSDDYFNTQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  KG+      ++S+  L      F   R G ++YG       ++  + ++  +T
Sbjct: 185 KTILAGMKGLPELIHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLKPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVSAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFA---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|257431477|ref|ZP_05607850.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus 68-397]
 gi|257277718|gb|EEV08388.1| alanine racemase 1 [Staphylococcus aureus subsp. aureus 68-397]
          Length = 382

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDSDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q  RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYHRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|302385985|ref|YP_003821807.1| alanine racemase [Clostridium saccharolyticum WM1]
 gi|302196613|gb|ADL04184.1| alanine racemase [Clostridium saccharolyticum WM1]
          Length = 395

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 99/375 (26%), Positives = 164/375 (43%), Gaps = 27/375 (7%)

Query: 10  KIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +DL A+++N  +M A L    R   VVK + YG G   +A A  +  V  + V +VEEG
Sbjct: 10  TVDLDAIRHNMEAMKANLKDGTRMIGVVKSDGYGHGAVPVAWA-IDPYVWGYAVATVEEG 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQ 127
           V LR +  +  I VL  +      ++ +  +   +  + +    S L    G      L 
Sbjct: 69  VILRKHGIRKPILVLGVVPYEGYGLLVEHGISSAVFQLKRAERLSSLAVREGKKAVIHLV 128

Query: 128 VDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +DTG +R+G  + +EA             ++  + +H A AD+        QLE+++  +
Sbjct: 129 LDTGMSRIGYPVTEEAAKEAATICGLPGIEVEGLFTHFAKADERDKKATDHQLEQYQKFV 188

Query: 187 S----HYKGIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDKINKSHPM---QTVVTA 238
           +        I     S+S  +L     +    R GIS+YG              +  +  
Sbjct: 189 AMLADRGITIPMLHCSNSAGILDLQRANLHAVRAGISIYGIYPSGEVDRDTVKLRPAMEL 248

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++ I  ++K   G  VSYGG     R+  +A   +GY DGYP  LSG            G
Sbjct: 249 KSFISYVKKIGPGTSVSYGGTFTADREMTVATVPVGYGDGYPRNLSG-----------KG 297

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTN 354
           +  I+G    ILG++ MD  M D+T     E  D + + G     +I ++D+A+A G  +
Sbjct: 298 EVLIRGQRARILGRVCMDQFMVDVTGIHEAEEEDEVVLIGRQGKEEITVEDLAMAGGGFH 357

Query: 355 YDLLVRIGTRYAKFY 369
           Y+++  IG R  + Y
Sbjct: 358 YEIVCDIGKRVPRIY 372


>gi|292559088|gb|ADE32089.1| Alanine racemase [Streptococcus suis GZ1]
          Length = 367

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 151/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +++++L A+  N+   M  L       AVVK NAYG G   +A  L +     F V
Sbjct: 6   HRPTQIRVNLDAIAENFEQVMTNLPPKTEAFAVVKANAYGHGAVAVAKKLSSQ-AAGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR    +  I +L  +      +    N+   ++S+  L     L +     
Sbjct: 65  SNLDEALELRKAGIEHPILILGVVPVRFLPVAHQLNISVTVASLDWLQDAKGLEADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++DTG  R+G      L        +    +  + +H A AD+        QL  F
Sbjct: 125 TVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIEGVYTHFATADEVDQAHFESQLSVF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +  +         +   +S+  +   +  F L R G  LYG       +     +Q  ++
Sbjct: 185 KEFLDVLPITPRWIHASNSATSIWHADTVFNLVRLGNILYGLNPSGRVLELPFDVQPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I+ +++  AG  + YG     T    IA   IGYADG   +L GL           
Sbjct: 245 LVSEIVHVKQVEAGTTIGYGATYHSTDSEWIATVPIGYADGLVRSLQGLS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G    I+G+I+MD     +  +  +  G  + + G D    I + + A   GT 
Sbjct: 295 --VLVDGQACEIVGRISMDQITIRLPHAYPL--GQKVTLIGQDGDKTISVQEWADRIGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + +
Sbjct: 351 NYEVVCLLTDRLPRIF 366


>gi|242278092|ref|YP_002990221.1| alanine racemase [Desulfovibrio salexigens DSM 2638]
 gi|242120986|gb|ACS78682.1| alanine racemase [Desulfovibrio salexigens DSM 2638]
          Length = 374

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 163/379 (43%), Gaps = 30/379 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +++DL A+++N+  +      +R   VVK +AYG G  ++A AL   G   F V +V 
Sbjct: 8   LEVEVDLNAIRHNYRLLRDK--GSRVYGVVKADAYGHGLIEVARALEEEGADTFAVGTVG 65

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPY 124
           EG++LR      RI  L G    ++      N I       +      + + + G     
Sbjct: 66  EGMQLRKSGCSKRIISLLGPLNEEDCFNAAQNKIIPFIGEFEQLEMLSAVVSAQGRKVEI 125

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERF- 182
           +L+ DTG +RLG S+ E                 L  SHLA +DDP      S Q E F 
Sbjct: 126 SLKFDTGMSRLGFSVNELDKLIEWLKINPQICPVLASSHLATSDDPAYEGYMSAQAETFS 185

Query: 183 ---RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-----QT 234
              + L      +EASLA+S+GIL+    H+   R GI+LYG    +           + 
Sbjct: 186 GILKRLADAGYELEASLANSAGILVHDQVHYSAQRGGIALYGSNPLLGTEWSESGRDLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +     I  +R+   G+ +SYG      RD  +A+   GYADGY   LS          
Sbjct: 246 AMQVRTNIAAVRELKKGQAISYGCTYTADRDMTVAIVCAGYADGYSRGLSST-------- 297

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G+  I G    ILG++ M + + D++    ++ GD   + G +    I  +D+A   
Sbjct: 298 ---GEVCIHGKRAKILGRVCMQLCIVDVSHIEGVKFGDTAYLLGGEGEGHISAEDLAGWW 354

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++   +G    + Y
Sbjct: 355 QTITYEIFCLLGM-NPRTY 372


>gi|238788483|ref|ZP_04632276.1| Alanine racemase, catabolic [Yersinia frederiksenii ATCC 33641]
 gi|238723396|gb|EEQ15043.1| Alanine racemase, catabolic [Yersinia frederiksenii ATCC 33641]
          Length = 357

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   ++L+AL++N  ++   +G+A+  +VVK NAYG G  +I   L       F +  
Sbjct: 3   RPISATLNLSALRHNLSTVRHHAGSAKIWSVVKANAYGHGLARIWQGLAA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+ ++ D   +             K          
Sbjct: 61  LNEAIMLREQGWQGPILLLEGFFQPQDLVLLDYYRLTTTVHSDWQLEAIKAARLSAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG  + +A      + +        ++SH A AD+        Q    + 
Sbjct: 121 YLKLNSGMNRLGFPVGQAEAIWQWAKSLSHVGEVTLMSHFANADNDIGVET--QFSLIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             +          +S+ IL  P  H+   RPGI LYG     +        +Q V++  +
Sbjct: 179 ATAQIPAARCFA-NSAAILRHPETHYDWVRPGIILYGAAPSGDSADIAEMGLQPVMSLNS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    G  V YG +   +    I V A GYADGYP                G   
Sbjct: 238 EIIALQSLSTGHSVGYGSRYTASAAQRIGVVACGYADGYPRLA-----------PSGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     ++G  ++++G +  +DDVA A+GT  Y+L+  
Sbjct: 287 RVDGILTQTVGSISMDMLTVDLTPCPQAQIGSKVEVWGENQPIDDVAKAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LANRVP 352


>gi|324995181|gb|EGC27093.1| alanine racemase [Streptococcus sanguinis SK678]
 gi|327469131|gb|EGF14603.1| alanine racemase [Streptococcus sanguinis SK330]
 gi|327473513|gb|EGF18933.1| alanine racemase [Streptococcus sanguinis SK408]
 gi|327489061|gb|EGF20856.1| alanine racemase [Streptococcus sanguinis SK1058]
          Length = 369

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 147/376 (39%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIAFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLDWLDLALDAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQVAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    + + +   +S+  L          R G  +YG       +   +  ++ ++
Sbjct: 186 HQILSELDNVPSLVHASNSATSLWHRETVLNAVRLGDIIYGLNPSGRVLALPYEFKSALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSKSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRVSMDQITVCLPQAYPL--GTSVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|241759708|ref|ZP_04757808.1| alanine racemase [Neisseria flavescens SK114]
 gi|241319716|gb|EER56112.1| alanine racemase [Neisseria flavescens SK114]
          Length = 352

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L+ N+  +  L GN +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNAQIRLDNLRQNYRFLKELHGN-KLLAVIKADAYGHGAVRCAHALADI-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+EGV+LR    +  I +L G+    E    D   +                        
Sbjct: 60  VDEGVELRQNGIKNPIVLLEGVFEAAEYADVDRYDLWPAIGSQWQLEAFVHHEWQRPTTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                +  +  +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYAAAYTALKQSESVENIVKFSHFACADEPENGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP   S                 + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++  S    +G  ++++G  I +++V+  +G   Y++L  I  R
Sbjct: 288 KRSRIIGRVSMDMITVELEASKE-GLGAEVELWGDVININEVSEVAGMIPYEILCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|225869873|ref|YP_002745820.1| alanine racemase [Streptococcus equi subsp. equi 4047]
 gi|254802387|sp|C0M6I5|ALR_STRE4 RecName: Full=Alanine racemase
 gi|225699277|emb|CAW92611.1| alanine racemase [Streptococcus equi subsp. equi 4047]
          Length = 366

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     ++DL A++ N   ++       RT AVVK NAYG G   ++ A+ +  V
Sbjct: 1   MISSLHRPTVARVDLEAIRANIDHIHQHIPKKVRTYAVVKANAYGHGAVAVSKAVEDQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  I   + ++     L   ++S+  L    K   
Sbjct: 60  DGYCVSNLDEALELRQAGIDKEILILGVILASELQLAIKHQLTITVASLEWLELAKKESV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+      +   +  +    QL  I +H A ADD    +   
Sbjct: 120 DFSQLHVHVKVDSGMGRIGVRSLAEANQLISILSDMGVQLDGIFTHFATADDSDHAMFDK 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           QL  F+ L+       A +   +S+  L      F   R GI +YG     N      P+
Sbjct: 180 QLTFFKQLVEQLDKRPALVHASNSATSLWHSETIFNAIRLGIVIYGLNPSGNSLSLPCPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+R++ +++  AG+ V YG          +    IGYADG+   + G       
Sbjct: 240 KEALSLESRLVHVKQIQAGDSVGYGASYVAAEPEYVGTLPIGYADGWTRNMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  ++G    I+G+++MD     +  +    +G  + + G      I   DVA 
Sbjct: 294 ------KVLVEGEFCDIIGRVSMDQLTIRLPKAYP--IGTKVTLIGQQGKQVITATDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 YRGTINYEVLCLLSDRIPREY 366


>gi|58040489|ref|YP_192453.1| alanine racemase [Gluconobacter oxydans 621H]
 gi|58002903|gb|AAW61797.1| Alanine racemase [Gluconobacter oxydans 621H]
          Length = 367

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 133/365 (36%), Positives = 206/365 (56%), Gaps = 18/365 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L + L A+  N++ + AL   A  A VVK +AYGL  +++AP L   G   FFV  ++
Sbjct: 15  AWLGVSLRAIAENYNLVAALGAGAECAVVVKADAYGLSADRVAPVLAARGAGTFFVAHLD 74

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           EG+ LR   P+ RIFVL+G  PG E  +   NL PV++ + Q+  + +     G + P A
Sbjct: 75  EGIALRAILPEVRIFVLHGFMPGCEGSMQAHNLFPVLNDLEQVRSWQRLCREKGCAFPAA 134

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQ DTG +R GLS Q+  D +      +   L L++SHLACAD P +  N++Q +RF  +
Sbjct: 135 LQFDTGMSRFGLSDQDLEDRSVF----EGLNLQLVMSHLACADTPDNPANAIQRKRFVEM 190

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + + G+  SLA+SSGI LGP+YHF+L RPG +LYG       S  +  VV+ +ARI+ I
Sbjct: 191 AAGFPGVPRSLAASSGIFLGPDYHFELIRPGAALYGIAPFEG-SRVLNPVVSLDARIVQI 249

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AG+ V YG     T+ + IA   +GYADG+    +G            G  +    
Sbjct: 250 RTVQAGDRVGYGLGWTATKPTRIATLGLGYADGFFRAQAGH-----------GAVWYGQT 298

Query: 306 MVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +P++G+++MD    D+TD+   ++ GD + + GP   +D +A ++GT  Y++L  +G+R
Sbjct: 299 RLPVIGRVSMDSISVDLTDAPAGLKAGDVLSVLGPAQDVDALARSAGTIGYEVLTALGSR 358

Query: 365 YAKFY 369
           + + Y
Sbjct: 359 FHRVY 363


>gi|254468799|ref|ZP_05082205.1| alanine racemase [beta proteobacterium KB13]
 gi|207087609|gb|EDZ64892.1| alanine racemase [beta proteobacterium KB13]
          Length = 357

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L+  I+L   K+N + + +L+ +++  A +K NAYG G   +A A        F V +
Sbjct: 2   RPLKALINLDNAKHNLNYVRSLAPSSKIMATLKANAYGHGLTLMAGAFNE--ADAFSVLT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +E+ ++LR      +I +L G    ++  I       ++          + +        
Sbjct: 60  IEDAIELREAGFDKKILLLEGAFDEEDLKIAAAYHFNLVVHNDYQLALIRQLPHDKQIDI 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG NRLG S+           N       + +SH A AD  +      Q      
Sbjct: 120 HLKINTGMNRLGFSINAVNKVYKQLKNDVRINEIVFMSHFANADKTNGTDGQYQEI---E 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEARI 242
            + +      S+A+S+ ++     H    RPGI LYG T      K   ++ V+T  + +
Sbjct: 177 KLMNDFNEPFSIANSAALISDNKTHADWVRPGIMLYGATPFDFSQKIPDLKPVMTLRSEV 236

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I I++   G+ V YG      +D  IA  A GYADGYP                G    I
Sbjct: 237 ISIQEIKKGQGVGYGEDFIADKDMRIATVACGYADGYPRHA-----------PTGTPVVI 285

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G     +G+++MDM   DITD  ++  G  ++++G  + +D+VA  + T  Y+LL  I 
Sbjct: 286 DGIKTKTVGRVSMDMLAVDITDLGNVNYGSMVELWGEQLSVDEVANNAKTVGYELLCAIS 345

Query: 363 --TRYA 366
             +R  
Sbjct: 346 SASRVP 351


>gi|302326590|gb|ADL25791.1| alanine racemase [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 434

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 167/378 (44%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++I+L AL NN   + +    + +    VK ++YG G    + A    G     V 
Sbjct: 42  RPNWIEINLDALCNNIQFIRSQIPASTKILLPVKADSYGHGSLACSFAAKFGGADYLGVA 101

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            + EG+ LR Y     I VL    P       +  L   I+ +     + + +   G   
Sbjct: 102 HISEGMLLRQYGMDLPILVLGPCTPSDFAYFVEYQLTAAITDIRTAMAFDQFLGETGTEC 161

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L +DTG NR G   ++  +    + + K  +   + +HLA AD P +    +Q++RF
Sbjct: 162 KAHLAIDTGMNRYGFDAEDFNN-IRAALSLKHLKFEGMFTHLATADMPGNPKTEIQIQRF 220

Query: 183 RTLIS--HYKGIEASLAS---SSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTV 235
             L+     +G+   +     S+G L  P  HF + RPG++LYG      I  + P++ V
Sbjct: 221 TRLVDVLEAEGLRPEICHCSSSAGTLTHPESHFDMVRPGLTLYGYNCMGAIPTTLPIKPV 280

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  ++ I  +     GE VSYGG     + + IA  AIGY DGY               +
Sbjct: 281 MKIKSTIRHVHDVKPGETVSYGGYWAAQQLTRIATIAIGYGDGYLRG-----------EY 329

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
             G  FI+G + PILG++ MD TM D++    ++VG+ + +   +    I ++ VA    
Sbjct: 330 NKGFVFIRGQLCPILGRVCMDATMVDVSHIPDVQVGETVDVVNGELDFRISMESVAEEHH 389

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++  R+  R  + Y
Sbjct: 390 TIPYEITSRVARRLYRKY 407


>gi|189501096|ref|YP_001960566.1| alanine racemase [Chlorobium phaeobacteroides BS1]
 gi|189496537|gb|ACE05085.1| alanine racemase [Chlorobium phaeobacteroides BS1]
          Length = 371

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 160/382 (41%), Gaps = 25/382 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M         I  + L++N+  +++ + G+ R  AVVK NAYG      +  L   GV+D
Sbjct: 1   MAGENLTSAIISSSNLEHNYRLTLDRIPGHCRIMAVVKANAYGHDAAGTSKILERLGVRD 60

Query: 60  FFVTSVEEGVKLRL---YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
           F V ++ E   LR     +  + I       P       + ++   I     L     + 
Sbjct: 61  FGVANIAEAASLRKQLTVSGHSEILAFSSPLPDHIARYLEHDIAATICDFNMLRAAESIA 120

Query: 117 SC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           S   V     +++DTG  RLG + + A      +      +LS I +H A +        
Sbjct: 121 SAHNVPLKVHVKIDTGMGRLGTTPENAFQLLEAAEKSPHLRLSGIYTHFAQS-TSRDAFT 179

Query: 176 SVQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINK 228
             Q + F  + S ++           A+S GIL   N  F + RPGI LYG      +  
Sbjct: 180 GRQRDLFTQICSEFEHRMQRTFCKHAANSGGILCHDNAFFDMVRPGIMLYGYFPDDSVKG 239

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V+    +++ I++  AG  +SY           IA  + GYADGYP TLS    
Sbjct: 240 RADLKPVMLLSTKVMFIKEVEAGTTISYNRTWTAPSRRRIATLSAGYADGYPRTLSNR-- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVA 347
                        I+G   P +G ITMD  M D+ +   + VGD   +F G  I   D+A
Sbjct: 298 ---------TTVSIRGKTFPQVGTITMDQFMVDLGNDRDVRVGDDALLFGGEGISAADLA 348

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
           L +GT +Y+LL  + +R  + +
Sbjct: 349 LTAGTISYELLCAVSSRVRRVF 370


>gi|331005749|ref|ZP_08329109.1| Alanine racemase [gamma proteobacterium IMCC1989]
 gi|330420438|gb|EGG94744.1| Alanine racemase [gamma proteobacterium IMCC1989]
          Length = 375

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 116/374 (31%), Positives = 187/374 (50%), Gaps = 26/374 (6%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L IDL+AL +NW  +    + + R AAVVK NAYGLG   +A  L+  G + FFV +++E
Sbjct: 7   LTIDLSALVDNWKLLQQKVAPSTRCAAVVKANAYGLGIAPVAKVLFANGCRVFFVATLDE 66

Query: 68  GVKLRL--YTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCG 119
           G++LR         I V  G+    EK +     +         S      +     +  
Sbjct: 67  GIELRTLLAKSDCEIIVFGGLFYDTEKSLCSAAWLHYSLIPVLYSVEHISRWLLFSSNVQ 126

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              P  ++VDTG +R+GLS+ E  +   +       Q S I+SH ACAD     +N  Q+
Sbjct: 127 KVLPSVVKVDTGMHRMGLSVGEFNEQLLSDV-MGRLQPSYIMSHFACADKSEHPLNRDQI 185

Query: 180 ERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
             F   +    S    I+ S+ +S+GI L  +  + L RPGI+LYGG    +K +PM+ V
Sbjct: 186 MAFDDCLIKIKSRLPDIQVSMCNSAGIFLDGDIFYDLVRPGIALYGGNPSPSKPNPMRPV 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           V     ++ ++   +G+ V YG      +++ +A+ + GYADG    LS           
Sbjct: 246 VKLTLGVMQLKVVASGDSVGYGASYIAQKETRLAIVSGGYADGLHRALSN---------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
             G  + KG  VPI+G+++MD  +FD+T+    +    I++ G    +DD+A A+GT  Y
Sbjct: 296 -AGFAYCKGQKVPIVGRVSMDTMVFDVTNVPGEDP-AMIEVLGECQTVDDLAQAAGTIAY 353

Query: 356 DLLVRIGTRYAKFY 369
           ++L  +G+R+ + Y
Sbjct: 354 EILTSLGSRFQRNY 367


>gi|224538222|ref|ZP_03678761.1| hypothetical protein BACCELL_03113 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520154|gb|EEF89259.1| hypothetical protein BACCELL_03113 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 833

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L  + +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 475 LEVNLGAMIANLNYYRSRLRPDTKMVCMVKASAYGAGSYEIAKTLQEHHVDFLAVAVADE 534

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 535 GSELRKAGITASIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 593

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +++DTG +RLG + ++          +       + SH   +D          Q+E F  
Sbjct: 594 IKLDTGMHRLGFAAKDMPRLIERLKGQNAVIARSVFSHFVGSDAAQFDAFTRGQIEMFEA 653

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P   F + R GI LYG +   N      +  T +
Sbjct: 654 ASMQLQEAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGVSPIDNSIINNVS--TLK 711

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  LTR+S IA   IGYADG    L                
Sbjct: 712 TTILQIRDVPQEDTVGYSRKGHLTRNSRIAALPIGYADGLNRHLGNGH----------AY 761

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y++L 
Sbjct: 762 CLVNGQRAPYVGNICMDVCMIDVTDI-DCKEGDAVEIFGDHLPITVLSDILETIPYEVLT 820

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 821 SISTRVKRIY 830


>gi|323187415|gb|EFZ72724.1| alanine racemase [Escherichia coli RN587/1]
          Length = 356

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLANSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|229496686|ref|ZP_04390400.1| Mur ligase domain protein/alanine racemase [Porphyromonas
           endodontalis ATCC 35406]
 gi|229316583|gb|EEN82502.1| Mur ligase domain protein/alanine racemase [Porphyromonas
           endodontalis ATCC 35406]
          Length = 827

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 157/373 (42%), Gaps = 23/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L++DL A+ +N       L    +  A+VK   YG+G  ++A  L    V    V   
Sbjct: 465 TTLEVDLDAVAHNLQYYRSKLPQGTQCIAMVKAQGYGVGAYEVAKKLDQMHVGALAVAVA 524

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--SHP 123
           +EG +LR     + I V+    P     + + +L PV+ S   L   +  +      +  
Sbjct: 525 DEGRELRSQGILSPILVMNP-EPTAFDTLLEWHLEPVVFSWKLLRALANKIDKQGFDNIG 583

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERF 182
             ++VDTG +RLG    E  +         L +   I +HLA AD P        QLE F
Sbjct: 584 VHIEVDTGMHRLGFRPDEIPELARFFAQSHLLRARSIFTHLAAADMPEEDAFTRNQLEVF 643

Query: 183 RTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           RT    +  I          +++G+   P Y F   R GI LYG +  ++K    +  V 
Sbjct: 644 RTTADQFSEIAGYRPLYHALNTAGVERFPQYAFDCVRLGIGLYGISPSMDKHL--EPAVR 701

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++        E + YG +  LT+   I +  IGYADGY   +S             
Sbjct: 702 LRTTLLQKSYISGDETIGYGRRGHLTQGGEIGIIPIGYADGYSRRMSCGR---------- 751

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYD 356
           G   + G   PI+G + MD  M D++     + GD + +FG  + +++D+A A  T  Y+
Sbjct: 752 GWVVVHGKRCPIVGNVCMDTCMIDLSQCPEAQEGDEVILFGDKEARIEDLARAIDTIPYE 811

Query: 357 LLVRIGTRYAKFY 369
           L+  +  R  + Y
Sbjct: 812 LIADLAPRVRRVY 824


>gi|77463017|ref|YP_352521.1| alanine racemase [Rhodobacter sphaeroides 2.4.1]
 gi|123592286|sp|Q3J3L4|ALR_RHOS4 RecName: Full=Alanine racemase
 gi|77387435|gb|ABA78620.1| alanine racemase [Rhodobacter sphaeroides 2.4.1]
          Length = 349

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 189/365 (51%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L IDL A+  NW +++ + + + +T AVVK ++YGLG  K+A AL  AG + FFV + 
Sbjct: 4   ATLTIDLDAIAANWRALDQMTASDCQTGAVVKADSYGLGAAKVAHALARAGARRFFVATC 63

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEG  +R       +I V  G   G   +I D +L P+++S+ Q    ++        P+
Sbjct: 64  EEGADVRRALGSGPQICVFSGHMEGDTALIRDFDLTPMLNSIDQ---LTRHFEALGGQPF 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            LQ+D+G NRLGL   E       +         L++SHLAC+DDP   +N+ QL  FR 
Sbjct: 121 GLQLDSGMNRLGLEPGEWEAVAGFALEA---GPELLMSHLACSDDPDHPMNAEQLGAFRA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +     G+  SL+++ GILLGP +HF+LTRPGI LYGG    N     + VV     +I 
Sbjct: 178 MTDG-TGVPRSLSATGGILLGPAWHFELTRPGIGLYGGRPFENA----RPVVRLSLPVIQ 232

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+   GE V Y         S IA  A GYADG P TLS   + ++  V          
Sbjct: 233 VREVEIGEPVGYSNTWTAEHTSTIATVAAGYADGLPRTLSSRATLYAGRV---------- 282

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+++MD+   D++    +     + I GP    DD+A  +GT  Y++L  +G R
Sbjct: 283 -PCPLVGRVSMDLITVDVSHLPEVPE--TLDILGPHQTPDDLADTAGTIGYEILTSLGRR 339

Query: 365 YAKFY 369
           Y + Y
Sbjct: 340 YQRRY 344


>gi|323964681|gb|EGB60152.1| alanine racemase [Escherichia coli M863]
 gi|327253872|gb|EGE65501.1| alanine racemase [Escherichia coli STEC_7v]
          Length = 356

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D   +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQYRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGIAGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYAARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|262183853|ref|ZP_06043274.1| alanine racemase [Corynebacterium aurimucosum ATCC 700975]
          Length = 367

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 155/371 (41%), Gaps = 21/371 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+  +DL A+ +N   +      AR   VVK +AY  G E+ AP +  AG   F V ++
Sbjct: 3   MLKTTVDLNAIAHNVARVKEAVAPARLMCVVKADAYAHGIERCAPVMAQAGADAFGVATL 62

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E V LR       I                 ++   I S+        L++        
Sbjct: 63  AEAVALRKVIDNLPIAAWLWEPTEDLAPALAADIQIGIPSL---AHAQALIAAETPTEAF 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT- 184
           + V+TG +R G+      +      +     +  ++SH ACAD+P    N  Q   FR  
Sbjct: 120 VMVETGMHRSGVDKHVWEETFRLLADAPHITVLGLMSHFACADEPEHPHNDHQESEFRQA 179

Query: 185 -LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             ++   G+E     LA+S   L  P+  F+  R G++LYG        H ++  +T EA
Sbjct: 180 LALAREVGLECPLNHLANSPAALTRPSARFEQVRVGLALYGLEPVAGLDHGLEPAMTWEA 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            ++ ++   AGE   YG       +  +A  ++GYADG P    G             + 
Sbjct: 240 SVVAVKPISAGESTCYGLTWTAESERELATVSVGYADGLPRAFQGAL-----------QV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDVALASGTTNYDLL 358
            I G + P +G++ MD  + D+  +   +  GD   IFG   +    +A A+GT NY+++
Sbjct: 289 GIGGELYPQVGRVCMDQIVVDLGSNPHGVRAGDTAVIFGRGGMSATGLAEAAGTINYEVV 348

Query: 359 VRIGTRYAKFY 369
            R   R  + Y
Sbjct: 349 CRPTGRTERTY 359


>gi|240140752|ref|YP_002965232.1| putative alanine racemase (alr-like) [Methylobacterium extorquens
           AM1]
 gi|240010729|gb|ACS41955.1| putative alanine racemase (alr-like) [Methylobacterium extorquens
           AM1]
          Length = 342

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 114/351 (32%), Positives = 177/351 (50%), Gaps = 14/351 (3%)

Query: 19  NWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQA 78
           NW ++ A +  A   AVVK +AYG G   +APAL+ AG + FFV  + EG+  R   P+A
Sbjct: 4   NWRALGACAPQAECGAVVKADAYGCGLAAVAPALWRAGCRTFFVAHLSEGIAARKILPEA 63

Query: 79  RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLS 138
            ++VL G+ PG  +      L PV+    +L  +++ M         +  DTG NRLGL 
Sbjct: 64  ALYVLNGLPPGHAEAFRAHRLRPVLGDAQELAEWAEAMQGAGPAALHV--DTGMNRLGLC 121

Query: 139 LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLAS 198
           + EAL    +    + G    ++SHL  A+ P   +N+ Q   F  + + +  + ASLA+
Sbjct: 122 VAEALALAGDPVIARAGIDL-VMSHLVSAELPDDPLNARQAADFARVRAAFPQMRASLAN 180

Query: 199 SSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGG 258
           SSG  L  +    L RPG +L+GG     + + M+ VV  EA I+ +R   AG    Y  
Sbjct: 181 SSGTCLANDARHDLLRPGYALFGGNPDPGQPNSMRPVVRLEATILQVRNVEAGATCGYNA 240

Query: 259 QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318
           + +      +A  ++GYADGYP + S             G   + G   PI+G I+MD+ 
Sbjct: 241 RWQAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGVPCPIVGLISMDLI 289

Query: 319 MFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + D+TD+     G    + G  + +D V  A+GT  Y++L  +G+RY + Y
Sbjct: 290 ILDVTDATQARRGGTATLIGDSLDIDTVGQAAGTIGYEILTSLGSRYVRDY 340


>gi|332297980|ref|YP_004439902.1| Alanine racemase [Treponema brennaborense DSM 12168]
 gi|332181083|gb|AEE16771.1| Alanine racemase [Treponema brennaborense DSM 12168]
          Length = 390

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 98/383 (25%), Positives = 153/383 (39%), Gaps = 35/383 (9%)

Query: 11  IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L  L++N  ++   +    R    VK +AYG G  + A      GV    V +V EG+
Sbjct: 17  IYLDNLRHNLAAIRTCIKPETRICVPVKADAYGHGAVQTARTAQECGVSYLAVAAVSEGI 76

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQV 128
           +LR    +  I +L    P +   I    L+P +     +   S+         P  L++
Sbjct: 77  ELREAGIELPILLLSVPQPEEFAEIVSYALMPAVFDAEFIDLLSETAVRMKRRLPVHLKI 136

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD---PSSHVNSVQLERFRTL 185
           DTG  R+G   +EA             +L+ + +H A AD            Q+ERF   
Sbjct: 137 DTGMGRIGCPAEEAARLAERISKSAALELAGVFTHFAAADSLVPADEAYTHGQIERFVQA 196

Query: 186 ISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD---------KINKSHP 231
           +   +           ASS+ IL  P   F + RPGI +YG            +  +   
Sbjct: 197 VDSIRDRHINPGIVHCASSAAILQYPEAQFDMVRPGIIVYGYYPGDITEDYLQRAGRPLH 256

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ ++   ++I  I+   AGE +SYG       D  I V  IGYADG             
Sbjct: 257 LKPLLEVRSKISAIKPIRAGESISYGRTWTADSDGEIGVIPIGYADGIIRRF-------- 308

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDV 346
                  +  + G   P+ G+I MD  M D+  +  +   D   IFGP         +D+
Sbjct: 309 ---APDIRISVNGRAYPVRGRICMDQCMIDLGKNSGVSRWDDAIIFGPKENGAACSAEDL 365

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A+GT +Y++L  I  R  + Y
Sbjct: 366 AQATGTISYEILCGINKRVPRVY 388


>gi|307709632|ref|ZP_07646084.1| alanine racemase [Streptococcus mitis SK564]
 gi|307619530|gb|EFN98654.1| alanine racemase [Streptococcus mitis SK564]
          Length = 367

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 159/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVATAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKKILILGVSDIEAVALAKEYDITLTVAGLEWIQALLVKEADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +    +  I +H A AD+ S    ++QLERF
Sbjct: 125 RVHLKIDSGMGRIGFREAGEANKAQDLLQQHGAHVEGIFTHFATADEESDDYFNIQLERF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +   +   +S+  L      F   R G ++YG       ++  + ++  +T
Sbjct: 185 KTILASMKEVPEMVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLKPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGTNGDKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|218553745|ref|YP_002386658.1| alanine racemase [Escherichia coli IAI1]
 gi|218360513|emb|CAQ98069.1| alanine racemase 2, PLP-binding [Escherichia coli IAI1]
          Length = 356

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    + +I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGQILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGAVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|168787693|ref|ZP_02812700.1| alanine racemase [Escherichia coli O157:H7 str. EC869]
 gi|261224927|ref|ZP_05939208.1| alanine racemase 2, PLP-binding protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261257216|ref|ZP_05949749.1| alanine racemase 2, PLP-binding protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|189372430|gb|EDU90846.1| alanine racemase [Escherichia coli O157:H7 str. EC869]
          Length = 356

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I   L   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSVL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  ++D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|253989451|ref|YP_003040807.1| alanine racemase, catabolic [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780901|emb|CAQ84063.1| alanine racemase, catabolic [Photorhabdus asymbiotica]
          Length = 357

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 151/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L AL+NN   +    GN++  AVVK NAYG G   I P L       F +  
Sbjct: 3   RPISATIHLDALENNLAVIRNKVGNSKIWAVVKANAYGHGLRCIWPHLDQ--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E + LR    Q  I +L G    ++  I D   +  +          +  +       
Sbjct: 61  FNEAILLREQGWQRPILLLEGFFQPEDLRIIDEYQLTTVVHSHWQLKAIEAANFSHPINI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG    +  +    + N +      ++SH A AD       + QL     
Sbjct: 121 YLKLNSGMNRLGFPADQYREVLSLAKNIRQIGQITLMSHFANAD--KKIGVTEQLNVID- 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
            +S    I   LA+S   L  P  H    R GI+LYG +            ++ V++ ++
Sbjct: 178 SVSQGLNISQCLANSGACLWYPQTHRDWVRTGIALYGASPSGKWEDIADVGLKAVMSLKS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ + YG +        +   A GYADGYP                G   
Sbjct: 238 EIIAVQNLKAGDKIGYGSKYTAPGPMRVGTVACGYADGYPR-----------CAMTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    +LG I+MDM   D+T     ++G  ++++G ++ +DDVA   GT  Y+LL  
Sbjct: 287 IVNGVRTQMLGAISMDMMTVDLTPCPQAQIGSPVELWGQNLPVDDVAGVPGTIGYELLCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAERVP 352


>gi|288803103|ref|ZP_06408538.1| Mur ligase domain protein/alanine racemase [Prevotella
           melaninogenica D18]
 gi|288334364|gb|EFC72804.1| Mur ligase domain protein/alanine racemase [Prevotella
           melaninogenica D18]
          Length = 826

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFLKPETKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR     + I ++        K +FD +L P + S   +     +         P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMTS-FKTLFDYDLEPEVYSFRLMDALVKAAQKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   Q +  +       +       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPQKDMDELIKRLKKQNAIIPRSVFSHFVGSDADNFDEFSAHQFALFD 645

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +SSGI   P     + R G+ LYG   + NK+    +  T 
Sbjct: 646 EGSKKLQAAFSHKIIRHMDNSSGIEHFPERQMDMCRLGLGLYGINPRTNKTINNIS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  +  DS+IA   IGYADG    L               
Sbjct: 704 KTTILQLRNVPAGDTVGYSRKGTIDHDSVIAAIPIGYADGLNRHLGNRHC---------- 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDTLDTIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 813 TTISNRVKRVY 823


>gi|299769496|ref|YP_003731522.1| alanine racemase [Acinetobacter sp. DR1]
 gi|298699584|gb|ADI90149.1| alanine racemase [Acinetobacter sp. DR1]
          Length = 356

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 164/363 (45%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ N++  ++VK N YG G +    AL  +    F V  ++EG++
Sbjct: 8   IDRNALQYNLNRVKQLAANSKIVSMVKANGYGHGIKDCLAALNAS--DAFGVACLQEGLE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQ 127
           +R    Q  + ++ G+    E  I  +     VI    Q  +  K     ++      ++
Sbjct: 66  IRELGFQQSVTLIEGVFSEDEMPIAIEQKFECVIHHQQQFEWLIKYKQKYIAQGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E ++       +    +  +    A  D     +N  Q ++F  +  
Sbjct: 126 LNSGMNRLGFKVTEIIEVIKTLKAEGFTCVLAMHFANADVD---HPLNEQQKQQFLQVKQ 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
             + + AS  +S+ I   P  HF   RPGI LYG +   +K      ++ V+T  A +I 
Sbjct: 183 ACEPVLASCCNSAAIYKWPELHFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFSAEVIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +      E V YG      +   IA+ +IGY DGYP                     I  
Sbjct: 243 LNHIQTNEHVGYGSTFCAKQAMDIAIVSIGYGDGYPRAY-----------IKQNYVAIDK 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +  ++G+++MDM   D+T  + +++G  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLCAVVGRVSMDMLAIDVTG-MQVKLGTPVELWGAHRLVDDVADANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PTR 353


>gi|19111844|ref|NP_595052.1| alanine racemase Alr2 [Schizosaccharomyces pombe 972h-]
 gi|12229663|sp|Q9P5N3|ALR2_SCHPO RecName: Full=Putative alanine racemase C359.02
 gi|7838267|emb|CAB91571.1| alanine racemase Alr2 [Schizosaccharomyces pombe]
          Length = 370

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 97/380 (25%), Positives = 152/380 (40%), Gaps = 26/380 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL----SGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQD 59
              R  IDL A+  N++ +  L    + +A    ++K NAYG G  ++A  L      + 
Sbjct: 2   RGARAVIDLRAIGYNYNLIRELLDEKNPDAHILCILKANAYGHGAVEVAQFLAKYCSAEG 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           F V S+EE ++LRL   Q RI +L G      E  + D     +     +          
Sbjct: 62  FGVASIEEALELRLSGIQNRILLLEGFFTDEDELSLIDKYNFSITIHCEEQLKSFMNYPF 121

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSV 177
                  L++D+G NRLG +  E  D      N K     +  +H A AD P        
Sbjct: 122 KKPVEVHLKLDSGMNRLGFTPAEYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLK 181

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD------KINKSHP 231
           Q   F           ++      +      H    R G  LYG               P
Sbjct: 182 QWRIFEKAAGCLPDPLSAGGGVIVVGWLNTIHMDWLRTGSMLYGLDPYDLDAKAPELPKP 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   +   + I+ ++     + + YGG    TRDSLI V AIGY DG+P           
Sbjct: 242 LIPAMKLMSTIVCVKHVEKDQPIGYGGAYVTTRDSLIGVVAIGYGDGFP----------- 290

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALAS 350
             V  G    I G  VP +GK+ MDM   D+TD   ++ GD + ++G P++ +++V+  S
Sbjct: 291 -QVRNGCPVIINGKRVPTVGKVCMDMLAIDVTDVPDVKRGDDVVLWGNPELTIEEVSTFS 349

Query: 351 GTTNYDLLVRIGTRYAKFYT 370
               ++++  +  R    YT
Sbjct: 350 NENPFEIITGLTRRVPLQYT 369


>gi|315651755|ref|ZP_07904760.1| alanine racemase [Eubacterium saburreum DSM 3986]
 gi|315486010|gb|EFU76387.1| alanine racemase [Eubacterium saburreum DSM 3986]
          Length = 392

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 170/384 (44%), Gaps = 27/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S +    K+DL A+K+N       L  + + AAVVK + YG G   ++  + +  V  
Sbjct: 1   MDSYKRAYAKVDLDAIKHNLTVTKKSLKKDMKLAAVVKADGYGHGSVPVSLYIEDI-VDF 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V ++EEG+ LR +     I +L  I     K     ++   + ++ Q    ++     
Sbjct: 60  FCVATLEEGINLRYHGITKPILILACIPRNSYKESIVFDIRESVFTLEQAEKINEEAKQM 119

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      + +DTG NR+G    +++ D      + +  ++  + +H   AD+        
Sbjct: 120 GKKAAIHIAIDTGMNRIGFKPTKKSADIIKEINDMENIEIEGVFTHFHSADESDLTSAKE 179

Query: 178 QLERFRTLIS--HYKGIEASL---ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP- 231
           Q   F   +   H  GI+  +   ++S+GIL      F + R GI++YG       +   
Sbjct: 180 QNLLFTNFLHTLHDMGIDPKIAHASNSAGILNRIGTEFDMVRCGITMYGIAPSGEVNLNG 239

Query: 232 --MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              +  ++  + +  I++  AGE VSYG      +D  +A  +IGYADGYP  LS     
Sbjct: 240 LDYRPALSIYSTVTYIKQINAGECVSYGATFVADKDMRVATISIGYADGYPRDLSN---- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G   I G    ILGKI MD T+ D++   + ++GD + I G      I +D+
Sbjct: 296 -------KGYVLIHGVRCNILGKICMDQTIVDVSAVDNAKIGDRVVILGESEGNKITVDE 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +   S T +Y+ +  I  R  + Y
Sbjct: 349 LTGDSNTFSYEFICGINKRVPRLY 372


>gi|332557893|ref|ZP_08412215.1| alanine racemase [Rhodobacter sphaeroides WS8N]
 gi|332275605|gb|EGJ20920.1| alanine racemase [Rhodobacter sphaeroides WS8N]
          Length = 349

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 188/365 (51%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L IDL A+  NW +++ + + + +T AVVK ++YGLG  K+A AL  AG + FFV + 
Sbjct: 4   ATLTIDLDAIAANWRALDQMTASDCQTGAVVKADSYGLGAAKVAHALARAGARRFFVATC 63

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEG  +R       +I V  G   G   +I D +L P+++S+ Q    ++        P+
Sbjct: 64  EEGADVRRALGSGPQICVFSGHMEGDTALIRDFDLTPMLNSIDQ---LTRHFEALGGQPF 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            LQ+D+G NRLGL   E       +         L++SHLAC+DDP   +NS QL  FR 
Sbjct: 121 GLQLDSGMNRLGLEPGEWEAVAGFALEA---GPELLMSHLACSDDPDHPMNSEQLGAFRA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +     G+  SL+++ GILLGP +HF+LTRPGI LYGG          + VV     +I 
Sbjct: 178 MTDG-TGVPRSLSATGGILLGPAWHFELTRPGIGLYGGRPFEEA----RPVVRLSLPVIQ 232

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+   GE V Y         S IA  A GYADG P TLS   + ++  V          
Sbjct: 233 VREVEIGEPVGYSNTWTAEHTSTIATVAAGYADGLPRTLSSRATLYAGRV---------- 282

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+++MD+   D++    +     + I GP    DD+A  +GT  Y++L  +G R
Sbjct: 283 -PCPLVGRVSMDLITVDVSHLPEVPE--TLDILGPHQTPDDLADTAGTIGYEILTSLGRR 339

Query: 365 YAKFY 369
           Y + Y
Sbjct: 340 YQRRY 344


>gi|167572513|ref|ZP_02365387.1| alanine racemase [Burkholderia oklahomensis C6786]
          Length = 374

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+  N   +   +  +R  +VVK NAYG   E+I PAL +       +  
Sbjct: 3   RPIVARIHPDAVARNLAIVRQKAPRSRIWSVVKANAYGHDIERIYPALAD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       I +L GI    +  I D + + V     +                
Sbjct: 61  LDEAVRVRELGWTKPILLLEGIFEAADVEIADRHRLTVAVHGDEQLTLLASAKTTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        Q+  F  
Sbjct: 121 QLKMNSGMNRLGYRPGAFRAAWERAAAAPSIGDIALMMHFANADEGE---IDWQMRAFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
                 G E +L++S+ +L  P  H    RPG  LYG +      H    P+Q  +T  +
Sbjct: 178 ATDGLPG-ERTLSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHLADVPLQPAMTVTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++   AGE V YG +    R+  I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAAGETVGYGRRFTAEREMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  VG  ++++G  +++DDVA A+GT  Y+LL  
Sbjct: 286 AVDGVRTQVVGRVSMDMLTVDLTPCPNAGVGSAVELWGAQVRVDDVAEAAGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|320195830|gb|EFW70455.1| Alanine racemase, catabolic [Escherichia coli WV_060327]
          Length = 356

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|261417347|ref|YP_003251030.1| alanine racemase [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261373803|gb|ACX76548.1| alanine racemase [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 407

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 167/378 (44%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++I+L AL NN   + +    + +    VK ++YG G    + A    G     V 
Sbjct: 15  RPNWIEINLDALCNNIQFIRSQIPASTKILLPVKADSYGHGSLACSFAAKFGGADYLGVA 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            + EG+ LR Y     I VL    P       +  L   I+ +     + + +   G   
Sbjct: 75  HISEGMLLRQYGMDLPILVLGPCTPSDFAYFVEYQLTAAITDIRTAMAFDQFLGETGTEC 134

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L +DTG NR G   ++  +    + + K  +   + +HLA AD P +    +Q++RF
Sbjct: 135 KAHLAIDTGMNRYGFDAEDFNN-IRAALSLKHLKFEGMFTHLATADMPGNPKTEIQIQRF 193

Query: 183 RTLIS--HYKGIEASLAS---SSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTV 235
             L+     +G+   +     S+G L  P  HF + RPG++LYG      I  + P++ V
Sbjct: 194 TRLVDVLEAEGLRPEICHCSSSAGTLTHPESHFDMVRPGLTLYGYNCMGAIPTTLPIKPV 253

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  ++ I  +     GE VSYGG     + + IA  AIGY DGY               +
Sbjct: 254 MKIKSTIRHVHDVKPGETVSYGGYWAAQQLTRIATIAIGYGDGYLRG-----------EY 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
             G  FI+G + PILG++ MD TM D++    ++VG+ + +   +    I ++ VA    
Sbjct: 303 NKGFVFIRGQLCPILGRVCMDATMVDVSHIPDVQVGETVDVVNGELDFRISMESVAEEHH 362

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++  R+  R  + Y
Sbjct: 363 TIPYEITSRVARRLYRKY 380


>gi|282917419|ref|ZP_06325172.1| alanine racemase [Staphylococcus aureus subsp. aureus D139]
 gi|282318621|gb|EFB48978.1| alanine racemase [Staphylococcus aureus subsp. aureus D139]
          Length = 382

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 154/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPVKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q + F+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYQCFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKIKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 NGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|126461891|ref|YP_001043005.1| alanine racemase [Rhodobacter sphaeroides ATCC 17029]
 gi|221638874|ref|YP_002525136.1| Alanine racemase [Rhodobacter sphaeroides KD131]
 gi|226711057|sp|A3PIR7|ALR_RHOS1 RecName: Full=Alanine racemase
 gi|254802372|sp|B9KQC8|ALR_RHOSK RecName: Full=Alanine racemase
 gi|126103555|gb|ABN76233.1| alanine racemase [Rhodobacter sphaeroides ATCC 17029]
 gi|221159655|gb|ACM00635.1| Alanine racemase [Rhodobacter sphaeroides KD131]
          Length = 349

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 188/365 (51%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L IDL A+  NW +++ + + + +T AVVK ++YGLG  K+A AL  AG + FFV + 
Sbjct: 4   ATLTIDLDAIAANWRALDQMTASDCQTGAVVKADSYGLGAAKVAHALARAGARRFFVATC 63

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEG  +R       +I V  G   G   +I D +L P+++S+ Q    ++        P+
Sbjct: 64  EEGADVRRALGSGPQICVFSGHMEGDTALIRDFDLTPMLNSIDQ---LTRHFEALGGQPF 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            LQ+D+G NRLGL   E       +         L++SHLAC+DDP   +N+ QL  FR 
Sbjct: 121 GLQLDSGMNRLGLEPGEWEAVAGFALEA---GPELLMSHLACSDDPDHPMNAEQLGAFRA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +     G+  SL+++ GILLGP +HF+LTRPGI LYGG          + VV     +I 
Sbjct: 178 MTDG-TGVPRSLSATGGILLGPAWHFELTRPGIGLYGGRPFEEA----RPVVRLSLPVIQ 232

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+   GE V Y         S IA  A GYADG P TLS   + ++  V          
Sbjct: 233 VREVEIGEPVGYSNTWTAEHTSTIATVAAGYADGLPRTLSSRATLYAGRV---------- 282

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+++MD+   D++    +     + I GP    DD+A  +GT  Y++L  +G R
Sbjct: 283 -PCPLVGRVSMDLITVDVSHLPEVPE--TLDILGPHQTPDDLADTAGTIGYEILTSLGRR 339

Query: 365 YAKFY 369
           Y + Y
Sbjct: 340 YQRRY 344


>gi|209964879|ref|YP_002297794.1| alanine racemase [Rhodospirillum centenum SW]
 gi|209958345|gb|ACI98981.1| alanine racemase [Rhodospirillum centenum SW]
          Length = 384

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 188/369 (50%), Gaps = 20/369 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW  + A    A   AVVK +AYGLG   +A  L   G   FFV   E G
Sbjct: 20  LVIDLGALAANWRDLAARVAPAECGAVVKADAYGLGAGPVARRLLAEGAHTFFVADTEAG 79

Query: 69  VKLR----LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           + LR       P+ RI VL+G+ PG    +    L+P ++++  L  + ++    G   P
Sbjct: 80  MALRTVLPAMQPEPRIVVLHGVPPGAAPDLAAARLLPALNTLGDLERWRAEGQRRGAPLP 139

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             + +DTG NRLGL+  E      ++       ++   +SHLACAD P+  +   QL RF
Sbjct: 140 CFVHIDTGMNRLGLTAAELDTLAGDADRLLAGVRVESWMSHLACADHPADPMTKTQLGRF 199

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           R  ++      ASLA+S+GI  G +YHF L RPGI+LYG        +PM+ VV   ARI
Sbjct: 200 RAALARLPAARASLANSAGIFHGRDYHFDLVRPGIALYGPNPAPWTENPMRPVVRVFARI 259

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
             +R   AG+ V Y    ++ R   IA   +GYADGYP  LSG            G    
Sbjct: 260 HQVRPVSAGDTVGYDATHRIGRPGRIAALGMGYADGYPWALSGR-----------GAALF 308

Query: 303 KG-YMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            G Y  P++G+++MD+   D+TD     +  G + ++ GP   +D  A  +GT  Y++L 
Sbjct: 309 GGAYRAPLVGRVSMDLLTADVTDVPEQFLAEGGWAEVIGPHRPVDTAATEAGTIGYEVLT 368

Query: 360 RIGTRYAKF 368
           R+G+RY + 
Sbjct: 369 RLGSRYHRV 377


>gi|206563057|ref|YP_002233820.1| alanine racemase [Burkholderia cenocepacia J2315]
 gi|198039097|emb|CAR55060.1| alanine racemase, catabolic [Burkholderia cenocepacia J2315]
          Length = 373

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +      +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTVAPSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L G+    +  + D   + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGVFEPADVELADRYRLTVAVHCDEQLDLLIAAKPRQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QLE+F  
Sbjct: 121 QLKMNSGMNRLGYRPAAFRAAWERAASAPSIGKITLMMHFANADEGE---VDWQLEQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S+++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 TTAGIPG-ERSVSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLVAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPEETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|306829934|ref|ZP_07463121.1| alanine racemase [Streptococcus mitis ATCC 6249]
 gi|304427945|gb|EFM31038.1| alanine racemase [Streptococcus mitis ATCC 6249]
          Length = 367

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M           AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRKNIQQMGNHIPKGTLKWAVVKANAYGHGAVAVATAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  D ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGVSKKILILGVSEIEAIDLAKDYDITLTVAGLEWIRVLLATGADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   ++  ++  I +H A AD+ S    + QLERF
Sbjct: 125 SVHLKIDSGMGRIGFREASEAEEAQDLLKQEGARVEGIFTHFATADEASDTYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T++S  K +      ++S+  L      F   R G ++YG       ++  + +   ++
Sbjct: 185 KTILSSMKEVPELIHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLTPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQTDSEQIIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKVYPL--GTKVTLIGSDGDKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|317048429|ref|YP_004116077.1| alanine racemase [Pantoea sp. At-9b]
 gi|316950046|gb|ADU69521.1| alanine racemase [Pantoea sp. At-9b]
          Length = 356

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL++N   +   +  +R  +VVK NAYG G  ++  +L       F + 
Sbjct: 2   SRPIVATINQQALRHNLAVVRQAAPASRIWSVVKANAYGHGIRRVWQSLAE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    ++  + D   +                       
Sbjct: 60  NMEEAILLREQGWKKPILLLEGFFHAEDLQLIDRYRLTTSVHSNWQIQALAQAQLSAPID 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   ++                  +++H A A++P   +  ++     
Sbjct: 120 IYVKVNSGMNRLGFRPEQVNAAWQALRGLANVGEMTLMAHFADAENPQGIIEPMKRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +   N     S  +  V+T  
Sbjct: 177 ERAAEGLNCPRSLSNSAATLWHPEAHFDWVRPGIVLYGASPSGNWQDIASTGLTPVMTLT 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I++  AG+ V YG +   +    I V A GYADGYP                G  
Sbjct: 237 SEIIGIQQLQAGDGVGYGYRYHASAAQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G M   +G I+MDM M D+       +G  ++++G  +K+DDVA A+GT  Y+L+ 
Sbjct: 286 VSVDGVMTRTVGAISMDMIMIDLEPCPQAGIGSKVELWGEQVKIDDVAKAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|225020515|ref|ZP_03709707.1| hypothetical protein CORMATOL_00522 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946904|gb|EEG28113.1| hypothetical protein CORMATOL_00522 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 378

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 85/383 (22%), Positives = 156/383 (40%), Gaps = 25/383 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     L   IDL A+  N   +  L   A+   VVK + Y  G   +A  +   G    
Sbjct: 1   MVVVNLLETVIDLDAIATNTRILKNLVQPAQLMCVVKADGYNHGAIPVARTVLANGADQL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG- 119
            V ++ E ++LR  +  A I               D N+   + S+       K  +   
Sbjct: 61  GVATLAEALELREASITAPILCWIWSPEQDFAAALDANIHLAVVSMAHAQAIVKYAAGKP 120

Query: 120 -VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK----KLGQLSLIISHLACADDPSSHV 174
                  +++DTG +R G+   +         +        +++ ++SHLACAD+P +  
Sbjct: 121 EKLVQTTIKIDTGLHRSGVDESQWEAVFTLLKDAGTATGNIEVTGVMSHLACADEPGNPA 180

Query: 175 NSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINK 228
           N  Q   F   I+  + +        L++S  +L  P+++ ++ RPG+++YG +      
Sbjct: 181 NDTQAAAFNRAIALGRQLGLELSVNHLSNSPAVLTRPDFYHEMVRPGLAVYGYSPLADGN 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
            + +Q  ++   ++ +++    GE  SY    +  +   +AV   GYADG P        
Sbjct: 241 DYGLQPAMSWVGKVTVVKPIEPGEGTSYNLTWRAAKPGYLAVIPAGYADGLPRRAQNHV- 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DIKLDDV 346
                     +  I G+  P +G+I MD  + D+ D+  ++  GD   IFGP  +   ++
Sbjct: 300 ----------EVTIGGHRYPQVGRICMDQFVIDLGDNPHNVRPGDEAIIFGPGGMSATEL 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A      NY ++     R  + Y
Sbjct: 350 ASRIQDINYAVICAPTGRTVRRY 372


>gi|331652220|ref|ZP_08353239.1| alanine racemase [Escherichia coli M718]
 gi|331050498|gb|EGI22556.1| alanine racemase [Escherichia coli M718]
          Length = 356

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 SLALRVP 352


>gi|262372192|ref|ZP_06065471.1| alanine racemase [Acinetobacter junii SH205]
 gi|262312217|gb|EEY93302.1| alanine racemase [Acinetobacter junii SH205]
          Length = 356

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 98/363 (26%), Positives = 164/363 (45%), Gaps = 23/363 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+ +++  ++VK NAYG G +    AL       F V  +EE + 
Sbjct: 8   IDSEALQYNLNRVKQLAPHSQIVSMVKANAYGHGVQDCLAALNA--TDAFGVACLEEALA 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIF---DTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           +R       I ++ G+    E           +       +    +K     +     ++
Sbjct: 66  IRRLGYTQPITLIEGVFTEDEMEDVIQQKLECVVHRHEQVEWLIQNKEAYNALGLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  + E +   H   +     +  +    A  D     +N  Q+++F  + +
Sbjct: 126 LNSGMNRLGFKINEIIAVIHQLKSLNFNCVLTMHFANADVD---HPLNEQQIQQFLEVKN 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIIL 244
             + I AS  +S+ I   PN HF   RPGI LYG T   +K      ++ V++ EA II 
Sbjct: 183 ACEPILASCCNSAAIYKYPNLHFDYVRPGIMLYGATPFADKDVNELDLKPVMSFEAEIIT 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           + +  AGE V YG     T    IA+ +IGY DGYP                     I  
Sbjct: 243 LNQIQAGESVGYGSTFTATNSMQIAIVSIGYGDGYPRAY-----------VKPNYVAIDK 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P++G+++MDM   D T+   ++VG  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QLTPVIGRVSMDMIAIDTTNL-QVKVGTKVELWGKTRLVDDVANANGTIGYELLCRLSNR 350

Query: 365 YAK 367
             +
Sbjct: 351 PQR 353


>gi|331701928|ref|YP_004398887.1| alanine racemase [Lactobacillus buchneri NRRL B-30929]
 gi|329129271|gb|AEB73824.1| Alanine racemase [Lactobacillus buchneri NRRL B-30929]
          Length = 374

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 141/381 (37%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++ +DL A+ +N H       +      VVK + YG G  ++A     AG   F V 
Sbjct: 7   RNAQVTVDLAAIYSNIHHAKQRLDDGDDLFQVVKADGYGHGAVQVAEIAEKAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCGV 120
            ++E ++LR    +  + VL    P   ++    N    +  I  + Q        +   
Sbjct: 67  ILDEALQLRQAGIRLPVLVLGITDPECAQLAASENISLTVGSIDWLNQAAKLLDTSAFKG 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
                L +DTG  R+G    + L       N    ++S   I +H A AD P       Q
Sbjct: 127 RLNIHLALDTGMGRIGFQTADELKAAVGVLNAHSDRMSFEGIFTHFATADSPDDTYFKFQ 186

Query: 179 LERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPM 232
            + F+  ++    +     +A+S+  L        + R GI+ YG            + +
Sbjct: 187 YQNFQDFMAVLDKRPKYVHVANSATSLWHKVCGGNMIRFGIAAYGLNPSGRDITQLPYQL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + I   +    G  + YG       D  I    +GYADG P  + G       
Sbjct: 247 KPGLSVTSEIDFSKLVKKGRSIGYGATYTTDSDQWIGTVPVGYADGIPRAMQGFS----- 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                    + G+  PI+G++ MD  M  +        G  + I G      I  DDVA 
Sbjct: 302 -------VLVDGHKCPIVGRVCMDQFMIRLPHDYP--YGTTVTIIGQSGDAQITADDVAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y+++  +  R  + Y
Sbjct: 353 YLHTISYEVICGLSPRLRRKY 373


>gi|330840033|ref|YP_004414613.1| Alanine racemase [Selenomonas sputigena ATCC 35185]
 gi|329747797|gb|AEC01154.1| Alanine racemase [Selenomonas sputigena ATCC 35185]
          Length = 372

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 158/381 (41%), Gaps = 25/381 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S   +  +I+L A+++N+  +  AL G A+  AVVK NAYG G   +A     AG     
Sbjct: 2   SKRAVWAEINLGAIRHNYRVIGEALCGGAKLCAVVKANAYGHGALAVAKEAVAAGAAYLA 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-V 120
           V ++ E  +LR       + VL  I P +       ++   ++++      S        
Sbjct: 62  VATLSEAAELRRAGIGTPLLVLGLIDPLEAAEAVSLDVTQTVANLALAKAISAEALAQEK 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    L +DTG  R+G + +EA     +       +L    SH A AD         QL 
Sbjct: 122 TAKLHLAIDTGMGRIGCTSEEASALARDIAVLPNIELEGAFSHFAMADVRDKAHARGQLA 181

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN------KS 229
            F       +          +A S+ IL  P  H  + R GI  YG            ++
Sbjct: 182 LFLRATEAIEEAGVHLKLRHIAESAAILQMPEAHLDMVRAGIIQYGMYPSEEVARDVRET 241

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            P++  +  +AR++ ++    G  + YG      R S IA   +GYADGY   LSG    
Sbjct: 242 SPLRPAMALKARVLFVKDVPEGFAIGYGCTWHAKRRSRIATLPLGYADGYIRALSG---- 297

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVAL 348
                       I G   P++G+I MD  M D+TD   +  G  + +FG   +  D+VA 
Sbjct: 298 -------KAHVEILGKTAPVVGRICMDQCMIDVTDIERVAEGTEVTLFGSATLSADNVAA 350

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++   I +R  + Y
Sbjct: 351 WLGTINYEIPCLIASRVRRVY 371


>gi|306826747|ref|ZP_07460049.1| alanine racemase [Streptococcus pyogenes ATCC 10782]
 gi|304431036|gb|EFM34043.1| alanine racemase [Streptococcus pyogenes ATCC 10782]
          Length = 366

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 163/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQKHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   I+S+  +        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAVANAITVTIASLDWIALARLEKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+GL   + ++   +S  +    +  I +H A AD+      + 
Sbjct: 120 ECQGLKVHVKVDSGMGRIGLRSSKEVNLLIDSLKELGADVEGIFTHFATADEADDTKFNQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL+ F+ LI+  +     +   +S+  +   +  F   R GI  YG       ++   P+
Sbjct: 180 QLQFFKKLIAGLEDKPRLVHTSNSATSIWHSDTIFNAVRLGIVSYGLNPSGSDLSLPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E+ ++ ++   AG+ V YG      +   +    IGYADG+   + G       
Sbjct: 240 QEALSLESSLVHVKMISAGDTVGYGATYTAKKSEYVGTVPIGYADGWTRNMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    ++G+++MD     +  +  +  G  + + G     +I   D+A 
Sbjct: 295 -------VLVDGQFCEMIGRVSMDQLTIRLPKAYPL--GTKVTLIGSNQQKNISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRIY 366


>gi|294793102|ref|ZP_06758248.1| alanine racemase [Veillonella sp. 6_1_27]
 gi|294794860|ref|ZP_06759995.1| alanine racemase [Veillonella sp. 3_1_44]
 gi|294454222|gb|EFG22596.1| alanine racemase [Veillonella sp. 3_1_44]
 gi|294456047|gb|EFG24411.1| alanine racemase [Veillonella sp. 6_1_27]
          Length = 374

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 25/382 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           ++     L I+ + ++ N   +  +L   + + AV+K N YG G   +       G +  
Sbjct: 3   NTMRPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESL 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V   EE V LR       I++L    P   +++ DTN IP +     L   +K+  +  
Sbjct: 63  AVAIPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLESLNKVADNHD 122

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +    A+ VDTG +R+G+  ++A++F     + +  ++    SH++ AD         Q 
Sbjct: 123 MIIRVAVAVDTGMHRIGIKPEDAIEFIKRIESYENLEIDGFFSHMSNADAADQSHAHSQT 182

Query: 180 ERFRTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HP 231
           ++F  ++   +           LA+S+G+L   +  F   RPGI  YG    ++      
Sbjct: 183 QKFHRMVDEIRAFRPEADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLG 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V++  + ++ ++   AGE + YG     T    IA   +GYADGYP +LS       
Sbjct: 243 LKPVLSFHSEVVHVQHIPAGEGIGYGSTYITTEPMTIATIPVGYADGYPRSLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                 G   I G   P++G+I MD  M  + D+++++ GD + + G      I   ++A
Sbjct: 298 ------GTVLIHGTRCPVVGRICMDQFMVSVPDTITVKPGDKVVLLGSQGHESISALEIA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             + T  Y++      R  + Y
Sbjct: 352 ALASTIPYEIFCGFSERVPRQY 373


>gi|226310176|ref|YP_002770070.1| amino acid racemase [Brevibacillus brevis NBRC 100599]
 gi|226093124|dbj|BAH41566.1| probable amino acid racemase [Brevibacillus brevis NBRC 100599]
          Length = 574

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 103/381 (27%), Positives = 168/381 (44%), Gaps = 31/381 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                I L  L++N   +   L  +    AVVK  AYG G  +IA  L   G+  F V +
Sbjct: 206 RAWADIHLPHLQHNVREIQQVLPKDCAMMAVVKAQAYGHGGWQIARFLNKLGIDHFAVAT 265

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++EG++LR    +  I VL       E+ I       +  +V    +   L    V  P 
Sbjct: 266 IDEGIELRKKGVKGEILVLGYT---DERRIRQIARFKLTQTVVDDEYAQTLNGYNVKIPV 322

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLER 181
            +++DTG  RLG S +           K L       +HL+ AD   +        Q++R
Sbjct: 323 HIKIDTGMGRLGESWEYTEKIAAMYRYKHLQVC-GTFTHLSVADSLEASDIAYTKNQIDR 381

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT----DKINKSHPM 232
           F+ +I           +  + SS G+L      +   R GI+LYG      DK+  S  +
Sbjct: 382 FQNVIEQLKEKGINPQKLHVQSSYGVLNYGELQYDYARMGIALYGMLSKQGDKVKTSIDL 441

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ +AR++ +++   G  V YG      +DS IA+ +IGYADG P  LS        
Sbjct: 442 RPVLSLKARVVQVKQVEKGAPVGYGRAHTAQKDSKIAIVSIGYADGVPRMLS-------- 493

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
              +G    I+G   PI+G + MD  + DI+D   ++ G+ +   G     +I  +++A 
Sbjct: 494 --QVGATCLIRGKRRPIIGFVCMDQLIVDISDIEEVQRGEVVTFIGRDQEEEITAEEMAQ 551

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
           +  T   +L+ R+G R  + Y
Sbjct: 552 SCKTITNELVSRLGERVKRVY 572


>gi|218549113|ref|YP_002382904.1| alanine racemase [Escherichia fergusonii ATCC 35469]
 gi|218356654|emb|CAQ89280.1| alanine racemase 2, PLP-binding [Escherichia fergusonii ATCC 35469]
 gi|324113955|gb|EGC07929.1| alanine racemase [Escherichia fergusonii B253]
 gi|325497535|gb|EGC95394.1| alanine racemase [Escherichia fergusonii ECD227]
          Length = 356

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 99/366 (27%), Positives = 159/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL  A    F + +
Sbjct: 3   RPIQASVDLQALKQNLAIVRRAAPDARVWSVVKANAYGHGIERIWNAL--ASTDGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +E+ V LR    +  I +L G     +  ++D   +             +          
Sbjct: 61  IEDAVTLRERGWKGPILMLEGFFHADDLAVYDKYRLTTSVHSNWQLKALQNARLNAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V++G NRLG   ++                  ++SH A A+        VQ      
Sbjct: 121 YVKVNSGMNRLGFPPEKIPTVWQQLRGMSNVGEMTLMSHFADAE---HPEGIVQALEKVE 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             S       SLA+S+  L  P  HF   RPGI LYG +   +     +  ++ V+T  +
Sbjct: 178 QASEGMECRRSLANSAATLWHPQAHFDWVRPGIILYGASPTGHWCDIANTGLKPVMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ V YGG+   + +  I + A GYADGYP                G   
Sbjct: 238 EIIGVQTLKAGDRVGYGGRYTASGEQRIGIVAAGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+  
Sbjct: 287 LVDGVRTITVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LALRVP 352


>gi|171909526|ref|ZP_02924996.1| alanine racemase [Verrucomicrobium spinosum DSM 4136]
          Length = 388

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/383 (27%), Positives = 162/383 (42%), Gaps = 35/383 (9%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I LTAL++N       SG+    AVVK NAYG G   +A AL    V  F V +++E
Sbjct: 16  WAEISLTALRHNAGVARTQSGH-DLMAVVKANAYGHGAVTVARALQEQ-VAVFGVANLQE 73

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR       I +L      ++           I+S+ +   +S+L    G +    +
Sbjct: 74  ALELRSAGLDTPILLLGTCLAEEQVPALRAGFHICINSLAEARAWSELAGRLGTTALGHV 133

Query: 127 QVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT- 184
            +DTG  R+G    E   D               + +HL   D+ +      Q+E F   
Sbjct: 134 VLDTGMGRMGFIEPEWTEDTVRALVALPHISWEGLATHLPSPDEDAG-FTRRQIELFHQS 192

Query: 185 ----LISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINKSHPMQTV--- 235
                +S  +     LASS+G+L  P  H    L RPG+ LYG     +           
Sbjct: 193 VRLAQVSGLQPRWVDLASSAGLLGYPAGHEFCNLVRPGLMLYGVDPLASTGLGDPYQEKL 252

Query: 236 ---VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              +T + R+IL+R+   G  +SYG      R + +A  A GYADGYP  +SG       
Sbjct: 253 RPVLTWKTRVILVRELPEGHGISYGRSHVTRRPTRVATLACGYADGYPRQVSGK------ 306

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL---SIEVGDYIQIFGPD----IKLDD 345
                    + G   P+LG++TMD  M D+TD      +  GD + + G      I  ++
Sbjct: 307 ----NAFVLLHGQRCPLLGRVTMDQIMVDVTDFPAGQPVVPGDEVVLLGTQGEAKISAEE 362

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
           VA  +GT ++ +   I  R A+ 
Sbjct: 363 VADKAGTISWHVFTGITARVARV 385


>gi|146319466|ref|YP_001199178.1| alanine racemase [Streptococcus suis 05ZYH33]
 gi|146321663|ref|YP_001201374.1| alanine racemase [Streptococcus suis 98HAH33]
 gi|253752482|ref|YP_003025623.1| alanine racemase [Streptococcus suis SC84]
 gi|253754308|ref|YP_003027449.1| alanine racemase [Streptococcus suis P1/7]
 gi|253756242|ref|YP_003029382.1| alanine racemase [Streptococcus suis BM407]
 gi|166969434|sp|A4W3N5|ALR_STRS2 RecName: Full=Alanine racemase
 gi|166969435|sp|A4VXD9|ALR_STRSY RecName: Full=Alanine racemase
 gi|145690272|gb|ABP90778.1| Alanine racemase [Streptococcus suis 05ZYH33]
 gi|145692469|gb|ABP92974.1| Alanine racemase [Streptococcus suis 98HAH33]
 gi|251816771|emb|CAZ52414.1| alanine racemase [Streptococcus suis SC84]
 gi|251818706|emb|CAZ56542.1| alanine racemase [Streptococcus suis BM407]
 gi|251820554|emb|CAR47310.1| alanine racemase [Streptococcus suis P1/7]
 gi|319758890|gb|ADV70832.1| alanine racemase [Streptococcus suis JS14]
          Length = 367

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 83/376 (22%), Positives = 151/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +++++L A+  N+   M  L       AVVK NAYG G   +A  L +     F V
Sbjct: 6   HRPTQIRVNLDAIAENFEQVMTNLPPKTEAFAVVKANAYGHGAVAVAKKLSSQ-AAGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR    +  I +L  +      +    N+   ++S+  L     L +     
Sbjct: 65  SNLDEALELRKAGIEHPILILGVVPVRFLPVAHQLNISVTVASLDWLQDAKDLEADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++DTG  R+G      L        +    +  + +H A AD+        QL  F
Sbjct: 125 TVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIEGVYTHFATADEVEQAHFESQLSVF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +  +         +   +S+  +   +  F L R G  LYG       +     +Q  ++
Sbjct: 185 KEFLDVLPITPRWIHASNSATSIWHADTVFNLVRLGNILYGLNPSGRVLELPFGVQPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I+ +++  AG  + YG     T    IA   IGYADG   +L GL           
Sbjct: 245 LVSEIVHVKQVEAGTTIGYGATYHSTDSEWIATVPIGYADGLVRSLQGLS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G    I+G+I+MD     +  +  +  G  + + G D    I + + A   GT 
Sbjct: 295 --VLVDGQACEIVGRISMDQITIRLPRAYPL--GQKVTLIGQDGDKTISVQEWADRIGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + +
Sbjct: 351 NYEVVCLLTDRLPRIF 366


>gi|260891454|ref|ZP_05902717.1| alanine racemase [Leptotrichia hofstadii F0254]
 gi|260858837|gb|EEX73337.1| alanine racemase [Leptotrichia hofstadii F0254]
          Length = 365

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 154/371 (41%), Gaps = 21/371 (5%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I++  L +N   +  +    +  AV+K +AYG G  +I  AL   G+++F V + +E
Sbjct: 4   WAEININNLYSNIDEIEKIVAKDKIIAVIKADAYGHGMLEICNALIKKGIKNFAVATSDE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYAL 126
            +K++       + +L  +      +I D N+  +++   ++ +  K     G +    +
Sbjct: 64  ALKIKELHDDIMVLILGPVENEYMDLIADKNIYFMVTDFEEIEYLEKTGKEKGKTTDVFI 123

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG  R+G    E     +           + I     + D       +Q  +F+ + 
Sbjct: 124 KIDTGMGRVGFQESETEKL-NEILKNASHINPIGIFSHFSSSDSDKDYTKLQESKFKAMC 182

Query: 187 SHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLY-GGTDKINKSHPMQTVVTAEA 240
                         L +S G L   +      R GI LY G T++    +  + V++  A
Sbjct: 183 EKISSGISSIKYRHLHNSFGTLKFQDSIEDFVRVGIILYGGVTEEETAPYKFKPVMSLFA 242

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I  I+       +SYG   K       A  +IGYADG    LS             G  
Sbjct: 243 KISYIKTLKEDSFISYGNTYKGKAGKTYATVSIGYADGVRRDLSN-----------KGYV 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           F KGY   I+G++ MD  +  + + L    + GD ++ FG +I + +VA    T +Y+++
Sbjct: 292 FYKGYKCEIVGRVCMDQLIILLPEELKNEAKKGDVVEFFGENISVVEVADLCNTISYEIM 351

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 352 CGISQRVPRIY 362


>gi|56459152|ref|YP_154433.1| alanine racemase [Idiomarina loihiensis L2TR]
 gi|56178162|gb|AAV80884.1| Alanine racemase [Idiomarina loihiensis L2TR]
          Length = 363

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 93/375 (24%), Positives = 159/375 (42%), Gaps = 21/375 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH     R +I  +A+++N   +       +   VVK + YG G      AL    V   
Sbjct: 1   MHY-RQTRAEISSSAIQHNAKWVRRKMAGGKLLGVVKADGYGHGVVPAVNALEEL-VDGM 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
               +EE + +R    +  + +L G     E  +   + +  +    Q   Y +      
Sbjct: 59  AAGFMEEALAVRETGYKGPLVILEGCFSATELNLCCEHQLSPVVHCEQQLEYIEQAKLTS 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+VDTG +RLG S ++A          K      ++SHLA AD     +N+ Q +
Sbjct: 119 PLWVWLKVDTGMHRLGWSEEQAPQALKRLRASKNVAGVTLMSHLANADA-EHRLNARQKQ 177

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHF-----QLTRPGISLYGGTDKI--NKSHPMQ 233
           +F  L    K  +A    +S  LL P+  +        R G+ LYG            ++
Sbjct: 178 QFCQLSETLKDYQARSFHNSAGLLNPDTQWSLQDNDWARAGLLLYGVNPSTVTEVQAELK 237

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   A +I + +   GE V YG      + S+IA  A+GYADGYP             
Sbjct: 238 PAMRLVAPVIALHQLEKGESVGYGSGWSADKPSVIATVAMGYADGYPRQAEN-------- 289

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
              G    ++G  V + G+++MDM   D+T   ++++GD ++++GP+I + +VA  + T 
Sbjct: 290 ---GTPAMVRGKRVGLAGRVSMDMLTIDVTGIENLQLGDDVELWGPNIDVREVAACADTI 346

Query: 354 NYDLLVRIGTRYAKF 368
           ++ LL  +  R  + 
Sbjct: 347 SWHLLTGVSGRVPRV 361


>gi|257877141|ref|ZP_05656794.1| alanine racemase [Enterococcus casseliflavus EC20]
 gi|257811307|gb|EEV40127.1| alanine racemase [Enterococcus casseliflavus EC20]
          Length = 373

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  ID TA+  N    +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAIIDTTAITENIKHEIAHLPSETFLFAVVKANGYGHGAVQTALAAKEGGADGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM---SCG 119
            +++E ++LR       I +L  ++     ++   +L   ++S+  L      +      
Sbjct: 66  ATIDEAIELREAGITDPILILGVVNVCDIALLTTYDLSFPVASMDWLIEAGAYLEENPLN 125

Query: 120 VSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 ++VDTG  R+G  +++E         +    +   I +H + AD   +     Q
Sbjct: 126 KPLKVHIKVDTGMGRIGFLTVEEVRQAVLWLEDHPSFEWEGIFTHFSTADQADTSYWETQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            +RF+ +++    +   +   +S+  L        + R GI++YG       +++   ++
Sbjct: 186 HQRFKEVLTVLPYLPTYIHTGNSATSLWHKEAVGNMVRFGIAMYGLNPSGHALSEPFSLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + +I ++    G  + YG      R   I    IGYADG+   + G        
Sbjct: 246 PALSLVSELIQVKLLEKGAGIGYGETYITPRQEWIGTVPIGYADGWLRKMQGFSI----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALA 349
                   ++G    I+G++ MD  M  +  +    VG  + +     G  I + DVA  
Sbjct: 301 -------LVEGERCEIVGRVCMDQLMIRLPRAF--AVGTPVTLIGENHGEQITMQDVADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y++   +  R  + Y
Sbjct: 352 LETIHYEVACTLSARVPREY 371


>gi|228989418|ref|ZP_04149407.1| Alanine racemase [Bacillus pseudomycoides DSM 12442]
 gi|228770365|gb|EEM18940.1| Alanine racemase [Bacillus pseudomycoides DSM 12442]
          Length = 389

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/387 (21%), Positives = 155/387 (40%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG 56
           M  + F R   ++++L  + NN   +  +   +    AVVK NAYG     +A     AG
Sbjct: 1   MEKSSFYRDTWVEVNLDEIYNNVTHIKEIIPESVEIFAVVKANAYGHDYVLVARTALEAG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I V+    P    +  + ++   +     +    ++ 
Sbjct: 61  ATRLAVAFLDEALVLRRAGITAPILVIGPSPPRDVNVAAENDVALTVFQKEWVEEAVEIW 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                  + +  D+G  R+G+   +E  +F  +  +    +L  + +H A AD+  +   
Sbjct: 121 DSPFPMKFHINFDSGMGRIGIRERKELKEFLRSLEDAPFLELEGVYTHFATADEVETSYF 180

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  +      F   R GI++YG +  +    
Sbjct: 181 DKQYNTFLEQLSWLKAFGVNPTFIHTANSAATMRFDGITFNAVRIGIAMYGLSPSVEIRP 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++    +  I++ + G+ +SY    +   +  IA   IGYADG+   L G 
Sbjct: 241 YLPIKLEPALSLHTTVAHIKRVIKGDRISYNVTYRTKTEEWIATVPIGYADGWLRRLQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  ++G  VPI+G+ITMD  M  +     + +G  + + G      I 
Sbjct: 301 ------------EVLVQGKRVPIVGRITMDQCMLHLP--CEVPLGTKVTLIGQQGDEYIS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  S T NY+++  I  R  + +
Sbjct: 347 ATEVAEYSNTINYEIIATISFRVPRVF 373


>gi|74311720|ref|YP_310139.1| alanine racemase [Shigella sonnei Ss046]
 gi|73855197|gb|AAZ87904.1| alanine racemase 2, catabolic [Shigella sonnei Ss046]
 gi|323165267|gb|EFZ51055.1| alanine racemase [Shigella sonnei 53G]
          Length = 356

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALVLRVP 352


>gi|332687104|ref|YP_004456878.1| alanine racemase [Melissococcus plutonius ATCC 35311]
 gi|332371113|dbj|BAK22069.1| alanine racemase [Melissococcus plutonius ATCC 35311]
          Length = 372

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 157/381 (41%), Gaps = 28/381 (7%)

Query: 3   SNEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   ++ ID  A+ NN  +    L+      AVVK N YG G  + A A    G   F 
Sbjct: 5   RHRPTKIHIDTQAIYNNVHNEKKRLAAETELFAVVKANGYGHGAVQTAYAAKKGGATGFC 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--- 118
           V  ++E ++LR  +    I +L  + P   + +   +L   ++    L   + ++     
Sbjct: 65  VALLDEALELREASLPDPILILGIVMPDYIEDLLAYDLSVTVTDQSWLERAAIILEKLKP 124

Query: 119 GVSHPYALQVDTGFNRLGLSLQEAL-DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                  ++VDTG  R+G   + A+    +   N    +   I +H + AD+  +     
Sbjct: 125 RKPLRLHIKVDTGMGRIGFLTETAVKKAINTITNNPYMEWEGIFTHFSTADERDTDYFDH 184

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPM 232
           Q E+F+ +I     +   +   +S+  L     ++ + R G+++YG      K    +P+
Sbjct: 185 QNEKFQKIIQILPFLPQYVHVSNSATALWHQENNYNMVRFGVAMYGLNPSGGKLATPYPL 244

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++  + ++ ++K  AGE + YG     ++D  I    +GYADG+   + G       
Sbjct: 245 LPALSLTSELVQVKKLPAGEGIGYGETYITSQDEWIGTFPMGYADGWLRHMQGF------ 298

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+++MD  M  +     I VG  + + G     +I L  +A 
Sbjct: 299 ------YVLVNGEKSEIIGRVSMDQCMIHL--KKEIPVGTKVTLVGKDQEEEITLQMIAD 350

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y++      R  + Y
Sbjct: 351 HLQTIHYEVACTFSQRVPREY 371


>gi|312870262|ref|ZP_07730391.1| alanine racemase [Lactobacillus oris PB013-T2-3]
 gi|311094207|gb|EFQ52522.1| alanine racemase [Lactobacillus oris PB013-T2-3]
          Length = 374

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 90/374 (24%), Positives = 149/374 (39%), Gaps = 29/374 (7%)

Query: 11  IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I+L AL  N  +  A L  +++  AVVK NAYG G   +A A   AG     V  ++E +
Sbjct: 13  INLRALGENIQAQKAALPADSKILAVVKANAYGHGLVPVAQAALRAGATGMCVAILDEAL 72

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSKLMSCGVSHPYAL 126
           +LR         VL      +  +  +  +   + S+        +++  +        L
Sbjct: 73  ELRDSGLDVITLVLGITPVEEANVAAEAGVSLTVGSLDWLTKYHQFARQFNWKKPLKIHL 132

Query: 127 QVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            VDTG  R+G  ++ E              +   + +H A AD         Q  R++  
Sbjct: 133 AVDTGMGRIGFTNVAEFNQAVKILRRYPEFEFEGMFTHFATADSADHTYFDRQYARWQKF 192

Query: 186 ISHYKGIEA--SLASSSGILLGPNYHF-QLTRPGISLYGGTDK---INKSHPMQTVVTAE 239
           I     +     +A+S+  L   +       R G+S+YG       + +   +Q V T  
Sbjct: 193 IESLDELPPYTHMANSATGLWHRDQITANTIRMGLSMYGYNPSGTDLPEDLHLQPVGTLR 252

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  ++K  AGE VSYG       D  +A   IGYADGYP  ++G             K
Sbjct: 253 SSISFVKKLAAGESVSYGATYTAEHDEWLATVPIGYADGYPRCMTGF------------K 300

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             + G   PI G++ MD  M  +     ++    + + G      I  +++A  + T NY
Sbjct: 301 VLVDGQYCPIAGRVCMDQMMVRLPKYYPVD--TPVILMGRSGDLTITAEEMADQAQTINY 358

Query: 356 DLLVRIGTRYAKFY 369
           ++L     R  + Y
Sbjct: 359 EILTNFNNRIHRTY 372


>gi|315302294|ref|ZP_07873187.1| alanine racemase [Listeria ivanovii FSL F6-596]
 gi|313629339|gb|EFR97579.1| alanine racemase [Listeria ivanovii FSL F6-596]
          Length = 371

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 148/378 (39%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N  +    L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 9   HRPTWIEIDRAAIRENIQNEQKHLPKNVAVWAVVKANAYGHGIIEVAKIAKEAGAKGFCV 68

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +    ++ G    ++  +     I   S       + + ++  V  
Sbjct: 69  AILDEALALREAGFRDDFILVLGATRKEDANLAARENI---SLTIYSEDWLEALNPEVPL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L++D+G  RLG+   E                L    +H A AD   +     QL R
Sbjct: 126 KVHLKIDSGMGRLGIREAEEAAQIEAKIAGNMNLILEGAYTHFATADQLETSYFDQQLAR 185

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F T++         +   +S+  LL     F   R GIS+YG T  I         ++  
Sbjct: 186 FHTILRALNERPTFVHTANSAASLLQSQVGFDAIRFGISMYGLTPSIEIKASLPFKLKQA 245

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     I+ +++   G+ VSYG     T    +A   IGYADG     SG          
Sbjct: 246 LALYTEIVHVKELAPGDSVSYGATYTATEKEWVATLPIGYADGLIRHYSGF--------- 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G  VPI+G++ MD T+  +      + G  + I G D    +  DD A    
Sbjct: 297 ---HVLVNGEKVPIIGRVCMDQTIIKLP--YKFQTGSKVTIIGTDEANTVTADDAAEYLD 351

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++   +  R  + Y
Sbjct: 352 TINYEVTCMLTERIPRKY 369


>gi|332365661|gb|EGJ43419.1| alanine racemase [Streptococcus sanguinis SK1059]
          Length = 369

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 145/376 (38%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  IDL A+  N   ++A         AVVK NAYG G  +++  +    V  F V
Sbjct: 7   HRPSKAVIDLAAIDFNIRQLSAHLPQTTEKWAVVKANAYGHGAIEVSRHIEPL-VDGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I VL         +     +   ++S+  L             
Sbjct: 66  SNIDEALELRSAGIGKKILVLGVSDLAALPLARKGKVSLTVASLEWLDLALTAEEDLTGL 125

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + +++D+G  R+G    +      +           I +H A AD+   H    QL RF
Sbjct: 126 NFHIKIDSGMGRIGFRDSQEAQEAIHRLQAAGAVAEGIFTHFATADEAEHHKFEAQLARF 185

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             ++S    +   +   +S+  L          R G  +YG       +   +  +  ++
Sbjct: 186 HQILSELDSVPPLVHASNSATSLWHSETVLNAVRLGDIIYGLNPSGTVLELPYEFKPALS 245

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG  V YG          I    +GYADG+   + G D          
Sbjct: 246 LVSELVHVKEVEAGADVGYGATYTSQSQEWIGTIPLGYADGWTRDMQGFD---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+G+++MD     +  +  +  G  + + G      I   DVA   GT 
Sbjct: 296 --VLIDGQRCPIVGRLSMDQITVRLPQAYPL--GTLVVLIGNSGAETITATDVAEKRGTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  I  R  + Y
Sbjct: 352 NYEVVCLISDRVPRVY 367


>gi|218689133|ref|YP_002397345.1| alanine racemase [Escherichia coli ED1a]
 gi|218426697|emb|CAR07532.1| alanine racemase 2, PLP-binding [Escherichia coli ED1a]
          Length = 356

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIISVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|260888171|ref|ZP_05899434.1| alanine racemase [Selenomonas sputigena ATCC 35185]
 gi|260862200|gb|EEX76700.1| alanine racemase [Selenomonas sputigena ATCC 35185]
          Length = 385

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 101/381 (26%), Positives = 158/381 (41%), Gaps = 25/381 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           S   +  +I+L A+++N+  +  AL G A+  AVVK NAYG G   +A     AG     
Sbjct: 15  SKRAVWAEINLGAIRHNYRVIGEALCGGAKLCAVVKANAYGHGALAVAKEAVAAGAAYLA 74

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-V 120
           V ++ E  +LR       + VL  I P +       ++   ++++      S        
Sbjct: 75  VATLSEAAELRRAGIGTPLLVLGLIDPLEAAEAVSLDVTQTVANLALAKAISAEALAQEK 134

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    L +DTG  R+G + +EA     +       +L    SH A AD         QL 
Sbjct: 135 TAKLHLAIDTGMGRIGCTSEEASALARDIAVLPNIELEGAFSHFAMADVRDKAHARGQLA 194

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN------KS 229
            F       +          +A S+ IL  P  H  + R GI  YG            ++
Sbjct: 195 LFLRATEAIEEAGVHLKLRHIAESAAILQMPEAHLDMVRAGIIQYGMYPSEEVARDVRET 254

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            P++  +  +AR++ ++    G  + YG      R S IA   +GYADGY   LSG    
Sbjct: 255 SPLRPAMALKARVLFVKDVPEGFAIGYGCTWHAKRRSRIATLPLGYADGYIRALSG---- 310

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVAL 348
                       I G   P++G+I MD  M D+TD   +  G  + +FG   +  D+VA 
Sbjct: 311 -------KAHVEILGKTAPVVGRICMDQCMIDVTDIERVAEGTEVTLFGSATLSADNVAA 363

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++   I +R  + Y
Sbjct: 364 WLGTINYEIPCLIASRVRRVY 384


>gi|157145451|ref|YP_001452770.1| alanine racemase [Citrobacter koseri ATCC BAA-895]
 gi|157082656|gb|ABV12334.1| hypothetical protein CKO_01194 [Citrobacter koseri ATCC BAA-895]
          Length = 356

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             +   +DL A+K N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPILASLDLQAMKQNLGIVRQAAPDARVWSVVKANAYGHGIERIWTAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     E  I+DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHADELAIYDTYRLTTCIHSNWQLKVLQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG   +                   ++SH A A+         Q     
Sbjct: 120 VYLKVNSGMNRLGFLPERVQTVWQQLRALPNVGEMTLMSHFADAE---HPEGIDQAMTKI 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 AHATEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++II ++   AG+ V YGG+   T++  I + A GYADGYP                G  
Sbjct: 237 SQIIGVQTLKAGDRVGYGGRYTATQEQRIGIVAAGYADGYPRHAPN-----------GTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTGTVGTVSMDMLAVDLTPCPQAGIGTSVELWGKEIKIDDVASAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|300311465|ref|YP_003775557.1| alanine racemase [Herbaspirillum seropedicae SmR1]
 gi|300074250|gb|ADJ63649.1| alanine racemase protein [Herbaspirillum seropedicae SmR1]
          Length = 359

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 90/365 (24%), Positives = 152/365 (41%), Gaps = 18/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I ++AL++N     A +  AR   V+K N YG G E+              +  
Sbjct: 3   RPIVASISISALQHNLAVARAHAPGARVWGVLKANGYGHGLERAMRGFAA--ADGLALIE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            +  V+LR       I +L G     +  +   + I       +     +  +   S   
Sbjct: 61  PDYAVRLRELGWTKPILLLEGFFDADDLPVLAQHDIQFAVHCEEQIAQLEAFTAAASLHA 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN--SVQLERF 182
            L++++G NRLG   +                   +++H A ADD  + +   + Q+ RF
Sbjct: 121 HLKMNSGMNRLGFKPETYRAAYARLQKIPSVASITLMTHFANADDAGNPLLPLAEQVRRF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTVVTAEA 240
           +       G   SL +S+  L+         RPG+ LYGGT          ++  +T E+
Sbjct: 181 QAGSEGLDG-PRSLCNSAADLMHAELANDWVRPGVMLYGGTPGGGSAADFGLRAAMTLES 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII I++  AGE + YG +    +   I V A GYADGYP                G   
Sbjct: 240 RIIGIQQVPAGEAIGYGSRFVADKPMKIGVVACGYADGYPRHAPN-----------GTPV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G+++MDM   D+T     +VG  ++++G  + +D+VA A+GT  Y+L+  
Sbjct: 289 LVDGVKTGTVGRVSMDMLTVDLTHIPDADVGSQVELWGSKLPIDEVAYAAGTIGYELMCA 348

Query: 361 IGTRY 365
           +  R 
Sbjct: 349 LAPRV 353


>gi|170740813|ref|YP_001769468.1| alanine racemase [Methylobacterium sp. 4-46]
 gi|226711054|sp|B0UL34|ALR_METS4 RecName: Full=Alanine racemase
 gi|168195087|gb|ACA17034.1| alanine racemase [Methylobacterium sp. 4-46]
          Length = 364

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 121/366 (33%), Positives = 186/366 (50%), Gaps = 15/366 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL I+L AL  NW  +   +  A  AAV+K +AYG G ++  PAL+ AG + FFV  + 
Sbjct: 9   ARLTINLRALAANWRRLAEEAAGAECAAVIKADAYGTGIDRAGPALWRAGCRTFFVAHLS 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E  + R   P+A I+VL G+ PG      D  L PV+ S  ++  + +   + G   P A
Sbjct: 69  EAERARAALPEAVIYVLNGLPPGSAPAYRDRALRPVLGSREEIEEWAAFCRARGERLPAA 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L VDTG NRLGLS  EAL     +  + +   SL++SHL  A+ P   V + Q+  F  +
Sbjct: 129 LHVDTGMNRLGLSPDEALALAGGAALEDV-AASLLVSHLVSAEVPGDAVTARQVADFARV 187

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + + G+ ASL +S+G  LG     ++ RPG +LYGG  +    +PM+ VV  +A I+ +
Sbjct: 188 AAAFPGLTASLGNSAGTFLGARARHEMVRPGYALYGGNPRPGGPNPMRPVVRLDATILQV 247

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    G    Y  +        +A  ++GYADGYP   SG             +  + G 
Sbjct: 248 RDVPPGATAGYNARWTAPGPRRLATLSLGYADGYPRAGSGR-----------AEAVVAGR 296

Query: 306 MVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
             P++G I+MD+ + D+TD+       G    + G  + +D+V   +GT  Y++L  +G 
Sbjct: 297 RCPVVGTISMDLVILDVTDAPPEAARRGARATLIGEGLDIDEVGQRAGTIGYEILTNLGR 356

Query: 364 RYAKFY 369
           R  + Y
Sbjct: 357 RSERAY 362


>gi|159039766|ref|YP_001539019.1| alanine racemase [Salinispora arenicola CNS-205]
 gi|189027391|sp|A8M4B3|ALR_SALAI RecName: Full=Alanine racemase
 gi|157918601|gb|ABW00029.1| alanine racemase [Salinispora arenicola CNS-205]
          Length = 372

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 158/377 (41%), Gaps = 27/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +++DL A++ N   + +    A   AVVK + YG G    A A  + G     V +++
Sbjct: 4   AEVRVDLDAIRENVSWLRS-GSAAELMAVVKGDGYGHGMVPAALAALDGGADWLGVCTLD 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E + LR     A I                  +    +SV Q         + G      
Sbjct: 63  EALTLRREGITAPILAWLLAPGLPLHEGVAAGIDLGAASVAQLDEMVQAGRTAGRPARLH 122

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           L++DTG +R G ++ +       +   +         + SH   AD P       QL  F
Sbjct: 123 LKIDTGLSRGGATVSDWPGLLTAAAKAQADGTVEVVGVWSHFVYADAPGHPTTDRQLAVF 182

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +     +  +     LA+S+  L  P+ HF L RPG+++YG +    +S  ++  +T
Sbjct: 183 HEGLDMVEKAGLRPRYRHLANSAATLTRPDAHFDLVRPGLAVYGLSPVAGESFGLRPAMT 242

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           A AR++L ++  AG  VSYG      RDS +AV  +GYADG P + S             
Sbjct: 243 ARARVMLTKQVPAGAGVSYGHTYTTERDSTLAVIPLGYADGVPRSASNS----------- 291

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
           G   + G    I G++ MD  + D  D   +  GD   +FG     +   DD A A GT 
Sbjct: 292 GPVHLGGVRRTISGRVCMDQFVLDCGDDP-VAPGDVAVLFGSGRNGEPTADDWAEAVGTI 350

Query: 354 NYDLLVRIGT-RYAKFY 369
           NY+++ R G+ R  + Y
Sbjct: 351 NYEIVTRFGSTRVPRSY 367


>gi|293365913|ref|ZP_06612616.1| alanine racemase [Streptococcus oralis ATCC 35037]
 gi|307702317|ref|ZP_07639275.1| alanine racemase [Streptococcus oralis ATCC 35037]
 gi|291315591|gb|EFE56041.1| alanine racemase [Streptococcus oralis ATCC 35037]
 gi|307624120|gb|EFO03099.1| alanine racemase [Streptococcus oralis ATCC 35037]
          Length = 367

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPERTLKWAVVKANAYGHGAVAVAMAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKKILILGVSEIEAIDLAKEYDITLTVAGLEWIQALLARETDLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +       +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFRDSSEAEQAQALLQQYGARVEGIFTHFATADEESDDYFNQQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + ++  +T
Sbjct: 185 KTILASMKEVPDLVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLKPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + +     G +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKIYPL--GTKVTLIGTNGGKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|331646502|ref|ZP_08347605.1| alanine racemase [Escherichia coli M605]
 gi|281178345|dbj|BAI54675.1| alanine racemase [Escherichia coli SE15]
 gi|330911052|gb|EGH39562.1| alanine racemase, catabolic [Escherichia coli AA86]
 gi|331045254|gb|EGI17381.1| alanine racemase [Escherichia coli M605]
          Length = 356

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L     HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHQEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|78186168|ref|YP_374211.1| alanine racemase region [Chlorobium luteolum DSM 273]
 gi|78166070|gb|ABB23168.1| alanine racemase [Chlorobium luteolum DSM 273]
          Length = 372

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 154/375 (41%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                 I L  L+ N   +   +G     AVVK NAYG G  + A AL   G+  F V +
Sbjct: 8   PMAEALIRLQHLQENARLIRKKAG-VPLMAVVKANAYGHGARETARALLAEGIGHFGVAN 66

Query: 65  VEEGVKLRLYTPQARI---FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           + E ++LR      R           P Q     +  +   +     L     + S  G 
Sbjct: 67  IHEAIELRTCGSLKRPAAILSFSSPLPSQIPSYLEHGIEMTVCDPATLRAAEAVASGAGA 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    L+VDTG  RLGLS  EA             +L  I +H A +          QLE
Sbjct: 127 TIGVHLKVDTGMGRLGLSPAEAKQVLQELPRCPHIELRGIYTHFADSS-FDRAFTRKQLE 185

Query: 181 RFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQ 233
            FR     Y+      +    A+S  IL  P+  F + RPGI LYG     +      ++
Sbjct: 186 AFRAFTGEYEHASGRRVLKHAANSGAILSEPDATFDMVRPGILLYGCHPSNDAHLRLDVK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  EAR++ ++   AG  +SY    K     +IA  A GYADGY  +LSG        
Sbjct: 246 PVMQVEARVVFLKTVTAGTTISYNRTWKAAGPRIIATIAAGYADGYHRSLSG-------- 297

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGT 352
                   I     P +G ITMD  M D+     + VGD   +FG   ++ +++A  +GT
Sbjct: 298 ---KATVSINAITYPQVGTITMDQIMVDLGTESDVRVGDRAVLFGWDGMRAEELASRAGT 354

Query: 353 TNYDLLVRIGTRYAK 367
            +Y+LL  +  R  +
Sbjct: 355 ISYELLTSVSARVLR 369


>gi|283785526|ref|YP_003365391.1| alanine racemase, catabolic [Citrobacter rodentium ICC168]
 gi|282948980|emb|CBG88583.1| alanine racemase, catabolic [Citrobacter rodentium ICC168]
          Length = 356

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  +DL ALK N + +   + +AR  +VVK NAYG G ++I  AL   G   F + +
Sbjct: 3   RPIQASLDLQALKQNLNIVRQAAPDARVWSVVKANAYGHGIDRIWNAL--GGTDGFALLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G    ++  ++DT  +             +          
Sbjct: 61  LEEAITLRERGWKGPILMLEGFFHAEDLAVYDTWRLTTCVHSNWQLKAIQNAKLNAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V++G NRLG   +                   ++SH A A+ P     ++      T
Sbjct: 121 YVKVNSGMNRLGFLPERLQTVWQQLRAMPNVGEMTLMSHFATAEHPGGIGKAMARIGLAT 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
                     SLA+S+  L  P  H    RPGI LYG +         +  ++ V+T  +
Sbjct: 181 EGLEC---RRSLANSAATLWHPEAHGDWVRPGIILYGASPSGQWRDIANTGLKPVMTLNS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ V YG +     +  I + A GYADGYP                G   
Sbjct: 238 EIIGVQTLQAGDRVGYGERFTAQGEQRIGIVAAGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+  
Sbjct: 287 LVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LALRVP 352


>gi|77409010|ref|ZP_00785730.1| alanine racemase [Streptococcus agalactiae COH1]
 gi|77172394|gb|EAO75543.1| alanine racemase [Streptococcus agalactiae COH1]
          Length = 366

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+ NN  S+      + +T AVVK NAYG G  +++     + V
Sbjct: 1   MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSKY-IESIV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR       I VL  + P Q  +  + N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVTSLEWLRLCQTSAV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  +   +   +    +  I +H A AD+  +   + 
Sbjct: 120 DLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASVKGIFTHFATADEADNCKFNQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+  IS           ++S+  L      F   R G+ +YG       ++  +P+
Sbjct: 180 QLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ E+ ++ +++   G  V YG   ++T D  +    IGYADG+   + G       
Sbjct: 240 NPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G +  I+G+++MD     +    +  +G  + + G      I   DVA 
Sbjct: 295 -------VIVNGELCEIIGRVSMDQMTIRLPQKYT--IGTKVTLIGQQGSCNITTTDVAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  ++Y
Sbjct: 346 KRQTINYEVLCLLSDRIPRYY 366


>gi|160891162|ref|ZP_02072165.1| hypothetical protein BACUNI_03609 [Bacteroides uniformis ATCC 8492]
 gi|317481059|ref|ZP_07940138.1| alanine racemase [Bacteroides sp. 4_1_36]
 gi|156859383|gb|EDO52814.1| hypothetical protein BACUNI_03609 [Bacteroides uniformis ATCC 8492]
 gi|316902772|gb|EFV24647.1| alanine racemase [Bacteroides sp. 4_1_36]
          Length = 841

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 150/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +     L    +   +VK +AYG G  +IA  L    V    V   +E
Sbjct: 483 LEVNLGAMIANLNYYRGKLKPETKMVCMVKASAYGAGSYEIAKTLQEHHVDYLAVAVADE 542

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR     A I ++        K +FD  L P + S   L    K        + P  
Sbjct: 543 GSELRKAGITANIIIMNPEMTA-FKTMFDYKLEPEVYSFHLLDALIKEAEKEGITNFPIH 601

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRT 184
           +++DTG +RLG +L++          +       + SHL  +D          Q+E F  
Sbjct: 602 IKLDTGMHRLGFALEDMPRLIERLKGQNAVIARSVFSHLVGSDSQQFDSFTRRQIEMFEK 661

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       I   + +S+GI   P   F + R GI LYG     N    M  V T +
Sbjct: 662 ASMELQGAFPHKILRHICNSAGIERFPGAQFDMVRLGIGLYGVNPIDN--SIMNNVSTLK 719

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  LTR S IA   IGYADG    L                
Sbjct: 720 TTILQIRDVPEEDTVGYSRKGHLTRPSRIAALPIGYADGLNRHLGNGH----------AY 769

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++ A  T  Y++L 
Sbjct: 770 CLVNGQRAVYVGNICMDVCMIDVTDI-DCKEGDSVEIFGNHLPITVLSDALATIPYEVLT 828

Query: 360 RIGTRYAKFY 369
            + TR  + Y
Sbjct: 829 SVSTRVKRVY 838


>gi|301017210|ref|ZP_07181991.1| alanine racemase [Escherichia coli MS 69-1]
 gi|300400341|gb|EFJ83879.1| alanine racemase [Escherichia coli MS 69-1]
          Length = 356

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMTRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L     HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHSEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|56962581|ref|YP_174307.1| alanine racemase [Bacillus clausii KSM-K16]
 gi|56908819|dbj|BAD63346.1| alanine racemase [Bacillus clausii KSM-K16]
          Length = 410

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 150/382 (39%), Gaps = 32/382 (8%)

Query: 7   LRLKIDLTALKNNW----HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +++DL A+ +N         +   N    AVVK NAYG G   +A     AG     V
Sbjct: 12  TWVEVDLNAISSNVSSLARFYKSQGHNVAIMAVVKANAYGHGAIAVAKEALAAGATFLGV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--GV 120
             ++E ++LR    QA I VL    P   ++     +   +     L   ++ ++     
Sbjct: 72  ALLDEALELRKAGIQAPILVLGKTRPENAELARSEGISVTVFEQEWLEEATRFLAKSPND 131

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                +++DTG  RLG    E       +  K    +  + +H A AD+        Q E
Sbjct: 132 PLRIHVKMDTGMGRLGQQTVENTMAVVCAAQKIG-VVEGLFTHFATADELDHTYYRKQQE 190

Query: 181 RFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHP 231
           RF   +   +    S+      +S+  +  P   + + R GIS+YG T  +         
Sbjct: 191 RFAACVDKLEEANVSIPFIHTGNSAASMRYPGDMYNMVRFGISMYGLTPSVEIKQALPFK 250

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   ++ + + +  +    G+ VSYG   +    + IA   IGYADG+    S       
Sbjct: 251 LIPALSLKTKTVFTKLIQKGDAVSYGATYQAEAPTWIATLPIGYADGWARQNS------- 303

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                GG   + G      G+I MD  M ++++   +  G  + + G      I+LDDVA
Sbjct: 304 ---TKGGYALVNGQKARFAGRICMDQCMIELSE--PVPNGTTVTLVGKDGQEQIELDDVA 358

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY+    +  R  + Y
Sbjct: 359 KRLDTINYEAACMLNPRLPRIY 380


>gi|312130284|ref|YP_003997624.1| alanine racemase [Leadbetterella byssophila DSM 17132]
 gi|311906830|gb|ADQ17271.1| alanine racemase [Leadbetterella byssophila DSM 17132]
          Length = 802

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 155/371 (41%), Gaps = 23/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L A+ +N +     L  + +   +VK  AYG G  ++A  L    V    V   +E
Sbjct: 442 LEINLDAITHNLNYYRRQLGSSTKIMVMVKAFAYGSG-NEVAAWLQYHRVDYLTVAFPDE 500

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH---PY 124
           GV LR       I V+    P     IF+  L P I S   L  Y K             
Sbjct: 501 GVALRENGISLPIMVMNS-DPDSYSTIFEYGLEPEIYSFRVLEAYLKAKENWKPDELTKI 559

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFR 183
            L++DTG +RLG   +E         +    Q++ I SHL  AD+      +  Q+  + 
Sbjct: 560 HLKIDTGMHRLGFLEKEVPPLLKALEDHPKVQVASIFSHLVGADEAKHDAFSKEQIACYE 619

Query: 184 TLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
              S             + +++GI+  P   + ++R GI LYG      +   +QTV T 
Sbjct: 620 RASSAIINGLGYSPIRHICNTAGIIRFPEARYDMSRLGIGLYGVASSGLEQKDLQTVATL 679

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I  I+     E V YG    L R+S IA  AIGYADGY                   
Sbjct: 680 KTTISQIKVLDPKETVGYGRYGVLNRESKIATIAIGYADGYDRGFG----------RGNA 729

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MDM M D+TD    + GD + +FG +  L ++A    T  Y++L
Sbjct: 730 FVLVHGKACPTMGSICMDMCMIDVTDV-DCKEGDEVIVFGENPSLTELAEKINTIPYEIL 788

Query: 359 VRIGTRYAKFY 369
             I +R  + +
Sbjct: 789 TGISSRVKRVF 799


>gi|300704262|ref|YP_003745865.1| alanine racemase 2, plp-binding [Ralstonia solanacearum CFBP2957]
 gi|299071926|emb|CBJ43255.1| alanine racemase 2, PLP-binding [Ralstonia solanacearum CFBP2957]
          Length = 368

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/361 (26%), Positives = 152/361 (42%), Gaps = 18/361 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I   AL NN       + ++R  AVVK NAYG G E++   L       F +  ++E V+
Sbjct: 2   IHGPALANNLQVARRHAPDSRVWAVVKANAYGHGIERVYEGLRQ--TDGFGLLDLDEAVR 59

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR    Q  + +L G   P    ++    L   I    QL         G      L+++
Sbjct: 60  LRQLGWQGPVLLLEGFFKPEDLALVEQYRLTTTIHCEEQLRMLELARLKG-PVSVQLKIN 118

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           TG +RLG +          +         + ++H + AD P       QL  F       
Sbjct: 119 TGMSRLGFAPAAYRAAWERARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFEQATQGL 176

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILI 245
            G EASL++S+  L  P  H    RPG+ LYG +        +   +   +T ++ +I I
Sbjct: 177 PG-EASLSNSAATLWHPRAHRDWVRPGVILYGASPTGVATDIEGTGLMPAMTLKSELIAI 235

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           +    G  + YG + ++ +   I + A GYADGYP    G    H           + G 
Sbjct: 236 QDLQPGATIGYGSRFQVEQPMRIGIVACGYADGYPRHAPGWGDNH-------TPVLVDGV 288

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
              ++G+++MDM   D+       VG  + ++G  + +D+VA A+GT  Y+L+  +  R 
Sbjct: 289 RTRMVGRVSMDMITVDLAGVPGARVGTPVTLWGQGLPIDEVAHAAGTVGYELMCALALRV 348

Query: 366 A 366
            
Sbjct: 349 P 349


>gi|78062814|ref|YP_372722.1| alanine racemase [Burkholderia sp. 383]
 gi|77970699|gb|ABB12078.1| Alanine racemase [Burkholderia sp. 383]
          Length = 373

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 154/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R   VVK +AYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAAQSRVWGVVKADAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELADRHRLTVAVHCDEQLDLLIAARPQQPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            + +        ++ H A AD+        QL++F  
Sbjct: 121 QLKMNSGMNRLGYRPAAFRAAWERAASAPSIGKITLMMHFANADEGE---VDWQLDQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +           P+   +T  +
Sbjct: 178 TTAGIPG-ERSTSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARDIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLSPEETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|70725962|ref|YP_252876.1| alanine racemase 1 [Staphylococcus haemolyticus JCSC1435]
 gi|68446686|dbj|BAE04270.1| alanine racemase 1 [Staphylococcus haemolyticus JCSC1435]
          Length = 382

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S++F R   L +DL+A+ NN++++  L  +     VVK N+YGLG  KIA  L   G   
Sbjct: 2   SDKFYRSTYLNVDLSAILNNYNTVRTLHSDKTVIPVVKANSYGLGSVKIAQHLMKNGADF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS--KLMS 117
           F V +++E ++LR++   A+I +L  I            +   + S+  L          
Sbjct: 62  FAVATLDEAIELRMHGINAQILILGVIPLEDINKAIQHRVALTVPSLQWLQHAIELISDD 121

Query: 118 CGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  RLG+  L+E  +      +        + +H A AD+P   +  
Sbjct: 122 NEKNLWLHVKLDTGMGRLGIKSLEEYKEVIDLIQSHPHLVFEGVYTHFANADEPGD-LMD 180

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKSHPMQTV 235
            Q E+F TL++  +  +   + +S   L  N+      R GISLYG          ++T 
Sbjct: 181 HQYEQFETLVTQAEKPKFIHSQNSAGSLLRNFELCNAVRLGISLYGYYPSAYVKEKVETE 240

Query: 236 VTAEA----RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   A    +++  +    GE VSYG     T D  IA+  IGYADGY  ++        
Sbjct: 241 LQPSAQLLTQVVQTKYLKVGESVSYGSTFTATEDIKIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    +KG+   ++G++ MD  +  + D   ++ GD + +           + +A
Sbjct: 294 -----GAFVNVKGHQCEVIGRVCMDQMIIKVPD--DVKEGDSVTLLDNAYDSPQSAETLA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++L  +G R  + Y
Sbjct: 347 QKQDTISYEVLCNLGRRLPRIY 368


>gi|237750219|ref|ZP_04580699.1| alanine racemase [Helicobacter bilis ATCC 43879]
 gi|229374113|gb|EEO24504.1| alanine racemase [Helicobacter bilis ATCC 43879]
          Length = 375

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 156/379 (41%), Gaps = 26/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            ++   I      +N   +            V+K +AYG G  K+       G+    V 
Sbjct: 8   RYVYANIHTDHFLHNLKLIREYVPQRTYLMLVLKADAYGHGALKLGKLALTHGIYQVGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           + +E ++LR +  QA+I VL    P         ++   +  +      +K         
Sbjct: 68  TFDEAMELREHLTQAKILVLGYTPPSVVDEAIKHDIELCVYDIDMARELNKSAKRQNKQA 127

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG NR+G     ++L+  H         +  I +H A AD       ++Q ER
Sbjct: 128 KIHIKLDTGMNRIGYQCDSKSLNEIHEIAKLSNVFIRGIFTHFASAD-CDLGYLNLQYER 186

Query: 182 FRTLIS---HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
           F   +S    ++      A+S+ I+     H  + R GI  YG             ++ V
Sbjct: 187 FCAFVSLLPKHEDTLLHCANSASIMNASKTHLDMVRLGIIAYGLKPSFAMDMQGLELKPV 246

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A I+ I++    E VSYGG     + + IA   +GYADGY   LS           
Sbjct: 247 MSFRAHIVHIKEVDTNECVSYGGTFITHKKTKIATLPVGYADGYMRLLSN---------- 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALAS 350
              +  I+G    ++G I MD  M D++D   ++VGD   +FG D     + +D++A   
Sbjct: 297 -KAEVLIRGKRARVIGNICMDQCMVDVSDIEEVKVGDCAVLFGYDDFGNILSVDELAAHI 355

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY+L   +  R A+ Y
Sbjct: 356 GTINYELTCAVSKRVARVY 374


>gi|170697807|ref|ZP_02888893.1| alanine racemase [Burkholderia ambifaria IOP40-10]
 gi|170137309|gb|EDT05551.1| alanine racemase [Burkholderia ambifaria IOP40-10]
          Length = 373

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   A+++N   +   +  +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHVRPDAVRHNLDFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELADRHRLTVAVHCDEQFDLLIAAKPRQPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        QL++F  
Sbjct: 121 QLKMNSGMNRLGYRPHAFRAAWERAAAAPSIGKITLMMHFANADEGE---VDWQLDQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERSASNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPDETVGYGRRFTADRPMRIGVVACGYADGYPRQA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|331657235|ref|ZP_08358197.1| alanine racemase [Escherichia coli TA206]
 gi|315297316|gb|EFU56596.1| alanine racemase [Escherichia coli MS 16-3]
 gi|331055483|gb|EGI27492.1| alanine racemase [Escherichia coli TA206]
          Length = 356

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPYARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARV--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 DQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|296130437|ref|YP_003637687.1| alanine racemase [Cellulomonas flavigena DSM 20109]
 gi|296022252|gb|ADG75488.1| alanine racemase [Cellulomonas flavigena DSM 20109]
          Length = 410

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 160/382 (41%), Gaps = 24/382 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R  +DL A++ N  ++ A +  A+  AVVK +AYG G    A A    G        V
Sbjct: 18  PARAVVDLGAVRGNVRALAAHAPTAQVMAVVKADAYGHGLVPSALAALEGGATWLGTAQV 77

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIF--DTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            E + LR         + +   PG            + V S        +     G +  
Sbjct: 78  PEALHLRRAGVTGARILTWLYAPGAPLREAVEADVDLSVASRWALDDVVAAAREAGRTAR 137

Query: 124 YALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             L+VDTG  R GL      E L     +  + + ++  + SHLA AD P   V + Q  
Sbjct: 138 VHLKVDTGLGRNGLVPAQLPEVLTAALAAEAEGVVRVVGVWSHLAFADAPDHAVVAQQAG 197

Query: 181 RFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT- 234
            F   ++  +          LA+S+  L  P  H+ L RPGI++YG +       P +  
Sbjct: 198 VFAEAVAAVEAAGARLEVRHLANSAATLTSPALHWDLVRPGIAVYGLSPVPQLGGPERFG 257

Query: 235 ---VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               +T EA++  ++   AG  VSYG +  +  D+++ V  +GYADG P   SG      
Sbjct: 258 LVPAMTFEAQLATVKPVPAGSGVSYGHEYVVPHDTVLGVVPVGYADGVPRHASGSAER-- 315

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                GG   + G  + + G++ MD  + D+    +   GD + ++G          D A
Sbjct: 316 ----WGGPVQVGGRRLGVAGRVCMDQVVLDLGPGATESAGDRVVLWGDGRDGGPTAQDWA 371

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             +GT +Y+L+ R+G R  + Y
Sbjct: 372 DVAGTISYELVTRLGARVPRTY 393


>gi|295095597|emb|CBK84687.1| alanine racemase [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 356

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +  ++DL ALK+N   +   +  +R  +VVK NAYG G ++I  AL   G   F + 
Sbjct: 2   SRPILAQLDLQALKDNLQIVRRAAPGSRVWSVVKANAYGHGIDRIWSAL--GGTDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  + D   +             +         
Sbjct: 60  NLEEAILLRERGWKGPILLLEGFFHAQDLPLLDKYRLTTSVHSNWQIKAIQDAKLHAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG   +            K      +++H A A+ P    +++      
Sbjct: 120 LYLKVNSGMNRLGFQPERVHTVWQQLRALKNVGEMTLMAHFADAEKPDGIADAMVRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  H+   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLDCPRSLSNSAATLWHPEAHYNWVRPGIVLYGASPSGQWQDIANSGLKPVMTLR 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AG+ V YG + +   +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGDTVGYGSRYRAAGEQRIGIVAGGYADGYPRIA-----------PSGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G     +G ++MDM   D+T      +G  ++++G ++K+DDVA A+GT  Y+L+ 
Sbjct: 286 VWVDGVRTGTVGTVSMDMLAIDLTPCPQAGIGSPVELWGNEVKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|269797315|ref|YP_003311215.1| alanine racemase [Veillonella parvula DSM 2008]
 gi|269093944|gb|ACZ23935.1| alanine racemase [Veillonella parvula DSM 2008]
          Length = 370

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L I+ + ++ N   +  +L   + + AV+K N YG G   +       G +   V 
Sbjct: 2   RPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE V LR       I++L    P   +++ DTN IP +     L   +K+  +  +  
Sbjct: 62  IPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLESLNKVADNHDMII 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+ VDTG +R+G+  ++A++F     + +  ++    SH++ AD         Q ++F
Sbjct: 122 RVAVAVDTGMHRIGIKPEDAIEFIKRIESYENLEIDGFFSHMSNADAADQSHAHSQTQKF 181

Query: 183 RTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
             ++   +           LA+S+G+L   +  F   RPGI  YG    ++      ++ 
Sbjct: 182 HRMVDEIRAFRPEADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++  + ++ ++   AGE + YG     T    IA   +GYADGYP +LS          
Sbjct: 242 VLSFHSEVVHVQHIPAGEGIGYGSTYITTEPMTIATIPVGYADGYPRSLSNR-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I G   P++G+I MD  M  + D+++++ GD + + G      I   ++A  +
Sbjct: 294 ---GTVLIHGTRCPVVGRICMDQFMVSVPDTITVKPGDKVVLLGSQGHESISALEIAALA 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++      R  + Y
Sbjct: 351 STIPYEIFCGFSERVPRQY 369


>gi|22537824|ref|NP_688675.1| alanine racemase [Streptococcus agalactiae 2603V/R]
 gi|25011768|ref|NP_736163.1| alanine racemase [Streptococcus agalactiae NEM316]
 gi|76788152|ref|YP_330298.1| alanine racemase [Streptococcus agalactiae A909]
 gi|77412407|ref|ZP_00788715.1| alanine racemase [Streptococcus agalactiae CJB111]
 gi|77414530|ref|ZP_00790676.1| alanine racemase [Streptococcus agalactiae 515]
 gi|81845386|sp|Q8DY10|ALR_STRA5 RecName: Full=Alanine racemase
 gi|81845564|sp|Q8E3M9|ALR_STRA3 RecName: Full=Alanine racemase
 gi|123601347|sp|Q3JZK5|ALR_STRA1 RecName: Full=Alanine racemase
 gi|22534718|gb|AAN00548.1|AE014268_8 alanine racemase [Streptococcus agalactiae 2603V/R]
 gi|24413308|emb|CAD47387.1| unknown [Streptococcus agalactiae NEM316]
 gi|76563209|gb|ABA45793.1| alanine racemase [Streptococcus agalactiae A909]
 gi|77159428|gb|EAO70593.1| alanine racemase [Streptococcus agalactiae 515]
 gi|77161542|gb|EAO72545.1| alanine racemase [Streptococcus agalactiae CJB111]
          Length = 366

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+ NN  S+      + +T AVVK NAYG G  +++     + V
Sbjct: 1   MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSKY-IESIV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR       I VL  + P Q  +  + N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVASLEWLRLCQTSAV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  +   +   +    +  I +H A AD+  +   + 
Sbjct: 120 DLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASVKGIFTHFATADEADNCKFNQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+  IS           ++S+  L      F   R G+ +YG       ++  +P+
Sbjct: 180 QLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ E+ ++ +++   G  V YG   ++T D  +    IGYADG+   + G       
Sbjct: 240 NPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G +  I+G+++MD     +    +  +G  + + G      I   DVA 
Sbjct: 295 -------VIVNGELCEIIGRVSMDQMTIRLPQKYT--IGTKVTLIGQQGSCNITTTDVAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  ++Y
Sbjct: 346 KRQTINYEVLCLLSDRIPRYY 366


>gi|170768101|ref|ZP_02902554.1| alanine racemase [Escherichia albertii TW07627]
 gi|170122867|gb|EDS91798.1| alanine racemase [Escherichia albertii TW07627]
          Length = 356

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 161/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + ++R  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLRALKQNLTIVRQAAPHSRVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D   +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQYRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG+S +  L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGVSPERVLTVWQQLRAMTNVGEMTLMSHFAGAEHPDGITDAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 DQAAEGLACRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+    G+ V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGIQTLKVGDQVGYGGRYTAPDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|190572625|ref|YP_001970470.1| alanine racemase [Stenotrophomonas maltophilia K279a]
 gi|190010547|emb|CAQ44156.1| putative alanine racemase [Stenotrophomonas maltophilia K279a]
          Length = 355

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 100/369 (27%), Positives = 163/369 (44%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L G  +  A++K +AYG G  + A AL       F V +
Sbjct: 2   RPARALIDLGALRSNYRLAREL-GGGKALAIIKADAYGHGAVRCAQAL-EGEADGFGVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE ++LR    +A I +L GI       ++ + +    + S  QL   +          
Sbjct: 60  IEEALELRQAGIRAPILLLEGIFELSDMALVAEHDFWFAVGSPWQLEAVAAF-DSPRPLT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +RLGL +                +  ++++HLA AD+  S     Q   F 
Sbjct: 119 VWLKLDSGMHRLGLDVDSFRAAHARLSALPEVERIVLMTHLARADELDSERTHEQAATFA 178

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEA 240
             I    G E S+ +S  +L  P+      RPG+ LYG     + +     ++ V+T ++
Sbjct: 179 RAIDGLHG-ETSVCNSPALLGWPDVRSDWVRPGLMLYGANPLPDDNTLTERLRPVMTMQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I  R   AGE V YG +      + + V A+GYADGYP                G   
Sbjct: 238 KVIAERWIEAGEPVGYGARFVAKARTRVGVVALGYADGYPQFAPN-----------GTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G    ++G+++MDM   D+T      VG  ++++G    L ++A   G + Y L   
Sbjct: 287 LIDGQPGALIGRVSMDMLTVDLTAHPQAAVGSVVELWGSAPTLAELAPRCGVSAYQLPCA 346

Query: 361 IGTRYAKFY 369
           +  R AK Y
Sbjct: 347 V-KRVAKVY 354


>gi|319745645|gb|EFV97945.1| alanine racemase [Streptococcus agalactiae ATCC 13813]
          Length = 366

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 164/381 (43%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+ NN  S+      + +T AVVK NAYG G  +++     + V
Sbjct: 1   MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSKY-IESVV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR       I VL  + P Q  +  + N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVASLEWLRLCQTSAV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  +   +   +    +  + +H A AD+  +   + 
Sbjct: 120 DLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASVKGVFTHFATADEADNCNFNQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+  IS           ++S+  L      F   R G+ +YG       ++  +P+
Sbjct: 180 QLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ ++ +++   G  V YG   ++T D  +    IGYADG+   + G       
Sbjct: 240 KPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G +  I+G+++MD     +    +  +G  + + G      I   DVA 
Sbjct: 295 -------VIVNGELCEIIGRVSMDQMTIRLPQKYT--IGTKVTLIGQQGSCNITTTDVAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  ++Y
Sbjct: 346 KRQTINYEVLCLLSDRIPRYY 366


>gi|110805189|ref|YP_688709.1| alanine racemase [Shigella flexneri 5 str. 8401]
 gi|110614737|gb|ABF03404.1| alanine racemase 2, catabolic [Shigella flexneri 5 str. 8401]
 gi|332757831|gb|EGJ88158.1| alanine racemase [Shigella flexneri 4343-70]
 gi|333005412|gb|EGK24930.1| alanine racemase [Shigella flexneri K-218]
          Length = 356

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQSDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|333007517|gb|EGK26995.1| alanine racemase [Shigella flexneri K-272]
 gi|333019899|gb|EGK39171.1| alanine racemase [Shigella flexneri K-227]
          Length = 356

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+  + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYGQHRLTTCVHSNWQLKALQNARLKAPLG 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|315606277|ref|ZP_07881293.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Prevotella buccae ATCC 33574]
 gi|315251968|gb|EFU31941.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Prevotella buccae ATCC 33574]
          Length = 831

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L+A+  N +   + +    +   ++K + YG G  +IA  L +  V    V   
Sbjct: 470 TTLEVNLSAVVKNLNHYRSFMKAETKLVCMIKADGYGAGAVEIAKTLQDHRVDYLAVAVA 529

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K         +P
Sbjct: 530 DEGVTLRRNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLEALIKAAEKEGITGYP 588

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG    Q+         ++       + SH   +D D     ++ Q   
Sbjct: 589 VHIKLDTGMHRLGFDPRQDMEQLIDRLRHQNAIIPRSVFSHFVGSDNDGFDEFSARQFAL 648

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F              I   + +S+GI   P     + R G+ LYG   + N+   +  V 
Sbjct: 649 FDEGSKQLQAAFEHKILRHIDNSAGIEHFPERQLDMCRLGLGLYGINPRNNE--IIHNVS 706

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ +R+  AG+ V Y  +  L  DS++A   IGYADG    LS            
Sbjct: 707 TLKTTILQMRRVPAGDTVGYSRKTVLEHDSVVAAIPIGYADGLDRHLSNRH--------- 757

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y+
Sbjct: 758 -GYCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDIVDTIPYE 815

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 816 VLTGISNRVKRVY 828


>gi|255532920|ref|YP_003093292.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Pedobacter heparinus DSM 2366]
 gi|255345904|gb|ACU05230.1| alanine racemase [Pedobacter heparinus DSM 2366]
          Length = 817

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 158/368 (42%), Gaps = 20/368 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++IDL AL  N       L    +  A+VK  +YG G  +IA  L    V    V   +E
Sbjct: 460 MEIDLNALAGNLQFYRSKLLPGVKVMAMVKAFSYGSGSFEIANLLQYHKVDYLAVAYTDE 519

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G+ LR       I V+    P     I   NL P I ++  L  +   +     +P  L+
Sbjct: 520 GISLRKAGITLPIMVMSP-EPSAFDAIIRYNLEPEIYNIEILQGFIGFLKTD-QYPIHLK 577

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLI 186
           +DTG +RLG    +  D        +  +++ + SHL  ++D         Q+ERF  + 
Sbjct: 578 IDTGMHRLGFEEPDLSDLLKVLTETRKVKVASVFSHLVGSEDGLHDEFTRHQIERFTAMT 637

Query: 187 S-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                  +      ++++SGI   P    ++ R GI LYG    +  +  +QTV   +  
Sbjct: 638 ELISETLHYPFIRHISNTSGISRHPETQLEMVRLGIGLYGFDAALKNNTALQTVAILKTT 697

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  I+     E V YG +  L +   IA   IGYADGY                  G+  
Sbjct: 698 ITQIKHLKPNETVGYGRKGLLPKGGTIATVKIGYADGYSRAFGNGT----------GRML 747

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           IKG +VP +G I MDM M D+T    ++ GD + +F  ++ +  +A   GT  Y++L  +
Sbjct: 748 IKGKLVPTVGVICMDMCMLDVTGL-DVKTGDEVIVFNNELSIAQLATQIGTIPYEILTNV 806

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 807 SQRVKRVY 814


>gi|171319654|ref|ZP_02908747.1| alanine racemase [Burkholderia ambifaria MEX-5]
 gi|171095107|gb|EDT40115.1| alanine racemase [Burkholderia ambifaria MEX-5]
          Length = 373

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   A+++N   +   +  +R  AV+K NAYG G E+I P L         +  
Sbjct: 3   RPIVAHVRPDAVRHNLDFIRRTAAQSRVWAVIKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVDLADRHRLTVTVHCDEHLDLLIAAKPRQPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        QLE+F  
Sbjct: 121 QLKMNSGMNRLGYRPHAFRAAWERAAAAPSIGKITLMMHFANADEGE---VDWQLEQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERSASNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPEETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+LL  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELLCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|224477060|ref|YP_002634666.1| alanine racemase [Staphylococcus carnosus subsp. carnosus TM300]
 gi|254802386|sp|B9DMI9|ALR_STACT RecName: Full=Alanine racemase
 gi|222421667|emb|CAL28481.1| alanine racemase [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 384

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 89/377 (23%), Positives = 151/377 (40%), Gaps = 25/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               LK+DL A+  N+  +  L  N     V+K NAYG+G   +   L   G + F V +
Sbjct: 7   RPTYLKVDLEAILKNYQVLGKLQPNKTVMPVIKANAYGMGSVNVGHYLKKHGAEFFAVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSH 122
           ++E ++LR++    +I +L  + P          +   + S   L    K +        
Sbjct: 67  LDEAIELRMHGIDTKILILGVVMPKDINKAIQHRVALTVPSYAWLNEAIKYLDEDLEKDL 126

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  RLG+   ++         + +      + +H A AD+  S     Q E 
Sbjct: 127 WLHVKIDTGMGRLGVKSAEDYQKTVALIQSHEHLIFEGVFTHFAQADE-DSPHTKEQYEI 185

Query: 182 FRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVV 236
           F   +            +S+G +L       + R GISLYG       +   +  +    
Sbjct: 186 FENWVDTIPHPSYVHAQNSAGTILFDAPICNMVRTGISLYGYYPSEYVEEQTNAELYPSA 245

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
                I+ I+    G+ VSYG      +   IA+  +GYADG+P  + G +         
Sbjct: 246 EWITEIVDIKYLNIGDTVSYGSTYTAEKSEKIAILPVGYADGFPRMMQGTN--------- 296

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                + G    I+G++ MD  M  + ++  I VGD + +   +      L   A    T
Sbjct: 297 ---VEVNGQQCTIIGRVCMDQMMIALPENEDINVGDKVTLLNREHSGPQSLLSHAKQQQT 353

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++L RIG R  + Y
Sbjct: 354 INYEVLCRIGRRVPRIY 370


>gi|323344463|ref|ZP_08084688.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Prevotella oralis ATCC 33269]
 gi|323094590|gb|EFZ37166.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Prevotella oralis ATCC 33269]
          Length = 896

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + +    +   ++K + YG G  +IA  L +  V    V   +E
Sbjct: 537 LEVNLNAVVDNLNHYRSFMKPTTKLVCMIKADGYGAGAVEIAKTLQDHRVDYLAVAVADE 596

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH--PYA 125
           GV LR     + I ++        K +FD +L P + S   L    K          P  
Sbjct: 597 GVTLRKNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLEALIKAAEKEGVAGFPVH 655

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG     +         ++       + SH   +D D     ++ Q   F 
Sbjct: 656 VKLDTGMHRLGFDPNKDIDRLIARMQHQNAVIPRSVFSHFVGSDSDSFDEFSARQFALFD 715

Query: 184 T-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +    I   + +S+GI   P     + R G+ LYG   + N  H +  V T 
Sbjct: 716 EGSRKLQAAFPHKILRHIDNSAGIEHFPERQLDMCRLGLGLYGIDSRNN--HIINNVCTL 773

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  + RDS+IA   IGYADG    L               
Sbjct: 774 KTTILQLRHVPAGDTVGYSRKGVIDRDSVIAAIPIGYADGLNRRLGNRRC---------- 823

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+TM D+T     + GD ++IFG  + +  ++ A  T  Y++L
Sbjct: 824 YCLVGGKRAEYVGNICMDVTMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDALDTIPYEVL 882

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 883 TCISNRVKRVY 893


>gi|293370373|ref|ZP_06616927.1| alanine racemase [Bacteroides ovatus SD CMC 3f]
 gi|292634521|gb|EFF53056.1| alanine racemase [Bacteroides ovatus SD CMC 3f]
          Length = 846

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 149/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 487 LEVNLGAMVANLNHYRSMLRHPETKMICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 546

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 547 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 605

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 606 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSSQFDAFTRGQIELFE 665

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   + + R GI LYG +   N    +  V T 
Sbjct: 666 KGSQELQAAFSHKILRHICNTAGIERFPEAQYDMVRLGIGLYGVSPIDN--SIIHNVSTL 723

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 724 KTTILQIRDVPQEDTVGYSRMGHLVRPSRIAAIPIGYADGLNRHLG----------RGNA 773

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 774 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLKTIPYEVL 832

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 833 TSISTRVKRVY 843


>gi|225567900|ref|ZP_03776925.1| hypothetical protein CLOHYLEM_03973 [Clostridium hylemonae DSM
           15053]
 gi|225163301|gb|EEG75920.1| hypothetical protein CLOHYLEM_03973 [Clostridium hylemonae DSM
           15053]
          Length = 388

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 162/385 (42%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALY-NAGVQ 58
           M +   +  +IDL A++ N   M       A+   VVK + YG G  +IA  L     + 
Sbjct: 1   MKAYNRVCARIDLDAVEYNIEMMKNNVRDGAKMLGVVKTDGYGHGAVQIAKMLSPKDYMW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
            F V +++E V LR    +  I VL  I P Q + +   ++   + +           + 
Sbjct: 61  GFAVATLDEAVVLRHGGIEKPILVLGCIFPDQREDMIKHDIRMTLYTEEMAREVSELAVK 120

Query: 118 CGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      +++DTG +RLG  + +EA D            +  + +H A AD+       
Sbjct: 121 IGKQAYIHIKLDTGMSRLGFLIGEEAADIIERISKMPNLVMEGMYTHFAKADEIDKSFTG 180

Query: 177 VQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q+  +  +                ++S+GI+  P  +  L R GIS YG         +
Sbjct: 181 KQIRNYVWMKETLEKRGVAFTYYHCSNSAGIIDVPEANMDLVRAGISTYGLYPSEEVHKE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           + P++  +   + +  ++   AG  VSYGG     R + IA   +GY DGYP +LS    
Sbjct: 241 NVPLKPAMELISHVAHVKWVDAGTPVSYGGTYITDRRTKIATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I G   PILG++ MD  M D T+   ++  D + + G D    + ++
Sbjct: 298 --------KGYVLIHGKKAPILGRVCMDQFMVDATEIDDVKYADKVTLVGNDGGEKLPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + +
Sbjct: 350 VLSGLSGRFNYEFVCDLGKRIPREF 374


>gi|254253815|ref|ZP_04947132.1| Alanine racemase [Burkholderia dolosa AUO158]
 gi|124898460|gb|EAY70303.1| Alanine racemase [Burkholderia dolosa AUO158]
          Length = 465

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 154/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A++ N   +   +  +R  AVVK NAYG G E+I P L         +  
Sbjct: 95  RPIVAHIRPDAVRRNLAFIRRTAAQSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 152

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +    D + + V     +                
Sbjct: 153 LDEAVRVRELGWDKPVLLLEGIFEPADVEWVDRHRLTVAVHCDEQLDLLIAAKPRQPIDI 212

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        QLERF  
Sbjct: 213 QLKMNSGMNRLGYRPDAFRAAWERAAAAPSIGTITLMMHFANADEGE---IDWQLERFDA 269

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
             +   G E ++A+S+G+L  P  H    RPG  LYG +     +     P+   +T  +
Sbjct: 270 ATAGIPG-ERTVANSAGVLWHPRAHRDWVRPGTILYGASPTGVARHIADTPLLPAMTLTS 328

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII ++    G+ V YG +    R   I V A GYADGYP                G   
Sbjct: 329 RIIGVQTLEPGDTVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 377

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T      +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 378 AVDGVTTRVVGRVSMDMLTVDLTPCPHAGIGSSVELWGDRVKVDDVAEASGTIGYELMCA 437

Query: 361 IGTRYA 366
           +  R  
Sbjct: 438 LARRVP 443


>gi|257885752|ref|ZP_05665405.1| alanine racemase [Enterococcus faecium 1,231,501]
 gi|261207115|ref|ZP_05921804.1| alanine racemase [Enterococcus faecium TC 6]
 gi|289565238|ref|ZP_06445689.1| alanine racemase [Enterococcus faecium D344SRF]
 gi|293556893|ref|ZP_06675454.1| alanine racemase [Enterococcus faecium E1039]
 gi|293567805|ref|ZP_06679146.1| alanine racemase [Enterococcus faecium E1071]
 gi|294615126|ref|ZP_06695012.1| alanine racemase [Enterococcus faecium E1636]
 gi|294618734|ref|ZP_06698265.1| alanine racemase [Enterococcus faecium E1679]
 gi|257821608|gb|EEV48738.1| alanine racemase [Enterococcus faecium 1,231,501]
 gi|260078743|gb|EEW66445.1| alanine racemase [Enterococcus faecium TC 6]
 gi|289162894|gb|EFD10743.1| alanine racemase [Enterococcus faecium D344SRF]
 gi|291589390|gb|EFF21197.1| alanine racemase [Enterococcus faecium E1071]
 gi|291592068|gb|EFF23691.1| alanine racemase [Enterococcus faecium E1636]
 gi|291595023|gb|EFF26369.1| alanine racemase [Enterococcus faecium E1679]
 gi|291600977|gb|EFF31268.1| alanine racemase [Enterococcus faecium E1039]
          Length = 373

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAIETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++      
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAVLEKSKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD       ++Q
Sbjct: 126 TPLSIHLKADTGMGRIGFCTPEEVKEAAAFIKESRVLEWEGLFTHFSTADQADDTYWNLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFIEVLKKLPELPRYIHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+P  + G        
Sbjct: 246 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWPRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + D+A  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDIADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|300717006|ref|YP_003741809.1| alanine racemase, catabolic [Erwinia billingiae Eb661]
 gi|299062842|emb|CAX59962.1| Alanine racemase, catabolic [Erwinia billingiae Eb661]
          Length = 356

 Score =  263 bits (671), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 158/367 (43%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   +D +AL++N       + ++R  +VVK NAYG G +++  +        F + 
Sbjct: 2   SRPIVATVDTSALRHNLAVARQAAPHSRVWSVVKANAYGHGIDRVWQSFAA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     E  I D   +                       
Sbjct: 60  NLEEAILLRERGWKKPILLLEGFFHADELAILDQYRLTTSVHSNWQIQALAKAKLSAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG + ++     +     +      +++H A A+         Q  R  
Sbjct: 120 IYLKVNSGMNRLGFAPEQVQQAWNKLRGLENVGEMTLMAHFAEAETSEGI---EQPLRRI 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L  P+ H    RPGI LYG +         S  +Q V++  
Sbjct: 177 EQAAEGLDCLRSLANSAATLWHPHTHHDWVRPGIILYGASPSGKWQDIASSGLQPVMSLN 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+    G+ V YG + +   +  I V A GYADGYP                G  
Sbjct: 237 SEIIAIQNLKTGDGVGYGSRYRAQGEQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            ++ G     +G I+MDM   D+T  L   +G  ++++G +IK+D+VA ++GT  Y+L+ 
Sbjct: 286 VWVDGVRTHTVGAISMDMITVDLTPCLQAGIGSQVELWGSNIKIDEVAESAGTVGYELMC 345

Query: 360 RIGTRYA 366
            + TR  
Sbjct: 346 ALATRVP 352


>gi|157150127|ref|YP_001449734.1| alanine racemase [Streptococcus gordonii str. Challis substr. CH1]
 gi|189027393|sp|A8AVC4|ALR_STRGC RecName: Full=Alanine racemase
 gi|157074921|gb|ABV09604.1| alanine racemase [Streptococcus gordonii str. Challis substr. CH1]
          Length = 368

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 152/381 (39%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  +DL+A+  N   + A    +    AVVK NAYG G   ++  + +  V
Sbjct: 1   MKTSIHRPSQALVDLSAIHFNIEQLKAHLPQDVEKWAVVKANAYGHGAVAVSSYIDDI-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR      +I +L         +     +   ++S+  L        
Sbjct: 60  DGFCVSNIDEALELREGGLDKKILILGVSAIEVVPLAIQNKITLTVASLEWLDLLEASSL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+VD+G  R+G   ++ L    N       Q+  I +H A AD+  +     
Sbjct: 120 SLQGLVVHLKVDSGMGRIGFRDRQPLQEAINRLQVAGVQVEGIFTHFATADEADASKFEE 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+ +++    +   +   +S+  L   +      R G  +YG       +   + +
Sbjct: 180 QLACFKGILAELDALPPIIHASNSATSLWHTDTVMNAVRLGDIIYGLNPSGSVLELPYDI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + ++ +++  AG  V YG          I    +GYADG+   + G D     
Sbjct: 240 KPALSLVSELVHVKEVEAGADVGYGATYTADEGQFIGTIPLGYADGWTRDMQGFD----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    I G   PI+G+I+MD     + +   +  G  +   G      I   DVA 
Sbjct: 295 -------VLIDGQRCPIVGRISMDQITVRLPEKYPL--GTPVVFIGKSGTESISATDVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  I  R  + Y
Sbjct: 346 KRGTINYEVVCLISDRVPRIY 366


>gi|291557577|emb|CBL34694.1| alanine racemase [Eubacterium siraeum V10Sc8a]
          Length = 379

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 18/370 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    +IDL AL++N++ +  L+      AVVK NAYG   + +   L   GV+ + V++
Sbjct: 6   KRAWAEIDLDALEHNYNEIKKLAKGKDILAVVKANAYGHDDKAVCLKLQELGVKYYGVSN 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + EG KLR +     I             + +  +     SV      S    S GV  P
Sbjct: 66  LWEGEKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLP 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V+TG  R+G+  Q+ +                  +     D         Q E+  
Sbjct: 126 VHIKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAYTHFAAADSLDPSDVEYTDRQQEKLM 185

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV--VTAEAR 241
             I+  KG+     +S GI+   ++   + R G+ LYG         P      +T ++ 
Sbjct: 186 K-IAKDKGLFIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSV 244

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  ++   AG  +SYG      ++  +AV  IGYADGY    S             GK  
Sbjct: 245 VSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFS-----------SKGKML 293

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---DIKLDDVALASGTTNYDLL 358
           I G +  ++G++ MD T+ D+++   I+ GD + ++     +  +D  A    T  Y+L 
Sbjct: 294 INGVLCNVVGRVCMDQTIVDVSNVPDIKTGDIVYVYSDKCRETSVDYNASLIDTIGYELT 353

Query: 359 VRIGTRYAKF 368
             +  R  + 
Sbjct: 354 CAVALRIPRV 363


>gi|241113131|ref|YP_002972966.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240861339|gb|ACS59005.1| alanine racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 377

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 186/365 (50%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++  + R  AVVK +AYGLG E++   LY+ G + FFV    E 
Sbjct: 23  LTIDLAALGRNYRKLVSMLASVRAGAVVKADAYGLGAERVGRTLYSEGCRHFFVAQFVEA 82

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           ++LR      A+IFVL G+ PG E    +  ++PV++S+ Q   +S          P  L
Sbjct: 83  LRLRPALAHDAQIFVLNGLQPGNEIACAEMGVVPVLNSLAQWRQWSTAARILKRCLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +           ++  I+SHLA ADD  S  N  Q+     + 
Sbjct: 143 QFDTGMSRLGFPEEERAELAAALSGSTNVEILFIMSHLASADDMDSDQNGEQIAEMSRIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG     + +PM+ VV+    ++  R
Sbjct: 203 DEFPGFDISFANSGGVFLGDPYHGVLARPGIALYGGAPNAGEKNPMEPVVSLNVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG     R++ +A  A GYADG P  L              G  + KG  
Sbjct: 263 TVPAGAKVGYGGAHVTQRETRLATIAAGYADGLPRCLGDR-----------GAVYFKGIR 311

Query: 307 VPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DI+      +  G  +++ G    L+D+A  +GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDISALPEGALTFGSLVEVLGRHQTLEDIACDAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YDRQY 376


>gi|291530912|emb|CBK96497.1| alanine racemase [Eubacterium siraeum 70/3]
          Length = 379

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 18/370 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    +IDL AL++N++ +  L+      AVVK NAYG   + +   L   GV+ + V++
Sbjct: 6   KRAWAEIDLDALEHNYNEIKKLAKGKDILAVVKANAYGHDDKAVCLKLQELGVKYYGVSN 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + EG KLR +     I             + +  +     SV      S    S GV  P
Sbjct: 66  LWEGEKLRQHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLP 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V+TG  R+G+  Q+ +                  +     D         Q E+  
Sbjct: 126 VHIKVNTGMTRVGIDSQQEMLDIIAMPGLDCKAAYTHFAAADSLDPSDVEYTDRQQEKLM 185

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV--VTAEAR 241
             I+  KG+     +S GI+   ++   + R G+ LYG         P      +T ++ 
Sbjct: 186 K-IAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSV 244

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  ++   AG  +SYG      ++  +AV  IGYADGY    S             GK  
Sbjct: 245 VSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFS-----------SKGKML 293

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---DIKLDDVALASGTTNYDLL 358
           I G +  ++G++ MD T+ D+++   I+ GD + ++     +  +D  A    T  Y+L 
Sbjct: 294 INGVLCNVVGRVCMDQTIVDVSNVPDIKTGDIVYVYSDKCRETSVDYNASLIDTIGYELT 353

Query: 359 VRIGTRYAKF 368
             +  R  + 
Sbjct: 354 CAVALRIPRV 363


>gi|291298088|ref|YP_003509366.1| alanine racemase [Stackebrandtia nassauensis DSM 44728]
 gi|290567308|gb|ADD40273.1| alanine racemase [Stackebrandtia nassauensis DSM 44728]
          Length = 366

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 158/372 (42%), Gaps = 24/372 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               +DL  +  N  ++   + +A     +K N YG G    A A  + G     V +++
Sbjct: 5   AEAVVDLGTIAANVEALAGRT-SAAVMPALKANGYGHGLVPAARACLDGGASRLGVATLD 63

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR     A I               D ++   ++S  QL+  +            L
Sbjct: 64  EAMELRNSGVAAPILAWLVAPGLDLAAAVDADIELAVASREQLSAVA-DAGARHPARIHL 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLERFR 183
           + DTG  R G    E       +   +      I    SHLACAD+P + +   Q + FR
Sbjct: 123 KADTGMGRGGAPRAEWQTLVDLAAKAQADGRIEIVGAFSHLACADEPGNPLTQSQDDNFR 182

Query: 184 T-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +  +     LA+S+G+L  P+ H+ L RPGI++YG    +    P++  +T 
Sbjct: 183 DFLDLLWAADVQPQWQHLANSAGLLAHPDTHYNLVRPGIAVYG-YPPVATEAPLRPAMTL 241

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            AR++L++   AG  + YG      R + +A+  +GYADG P + S              
Sbjct: 242 RARVVLVKTLPAGHGIGYGHTYVTKRPTRVAIVPLGYADGIPRSTSNR-----------A 290

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
           +  + G   PI G+++MD  +    D   +  GD ++ FG  DI  +D A    T +Y++
Sbjct: 291 EVLVGGRRCPIRGRVSMDQVVV-EVDEGDVRAGDVVEFFGDGDITAEDWATWHDTISYEI 349

Query: 358 LVRIGTRYAKFY 369
           L  IG R  + Y
Sbjct: 350 LTSIGPRIPRRY 361


>gi|223043945|ref|ZP_03613986.1| alanine racemase [Staphylococcus capitis SK14]
 gi|222442660|gb|EEE48764.1| alanine racemase [Staphylococcus capitis SK14]
          Length = 382

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/382 (24%), Positives = 162/382 (42%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R   L ++L A+ NN+ + N L  N    +V+K N+YGLG  K+A  L   G   
Sbjct: 2   SEKFYRSTYLNVNLDAILNNYQTFNQLHHNKTVISVIKANSYGLGSVKVAHHLMEHGASF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMS 117
           F V +++E ++LR++   A++ VL  I            +   + S   L     +    
Sbjct: 62  FAVATLDEAIELRMHGIDAKLLVLGVIPTKDISKAIQHRVALTVPSKAWLKEAIRNIPEK 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                    ++D+G  RLG+  ++E  D       K       + +H A AD+P   +N 
Sbjct: 122 NEKKLWLHAKIDSGMGRLGMKDVEEYKDVVDIINKKDDLVFEGVFTHFASADEPGDSMN- 180

Query: 177 VQLERFRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
            Q E F+ +++  +        +S+  LL         R GISLYG         N    
Sbjct: 181 EQYEFFKDIVNQVEKPNYIHSQNSAASLLMDGQFCNAIRLGISLYGYYPSQYVRDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++        I+ ++    GE VSYG      ++  IA+  +GYADGY   +        
Sbjct: 241 LRPSAQLVTEIVQVKSLKVGETVSYGRTFTADKEMKIAILPVGYADGYLRAMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVA 347
                G    + G+   ++G++ MD T+  + D   +++GD + +    I     ++ +A
Sbjct: 294 -----GAYVNVNGHQCEVVGRVCMDQTIVSVPD--DVKMGDKVILMDNHIDSPQSVESLA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +  R  + Y
Sbjct: 347 EKQHTINYEVLCNLSKRLPRIY 368


>gi|261380880|ref|ZP_05985453.1| alanine racemase [Neisseria subflava NJ9703]
 gi|284796357|gb|EFC51704.1| alanine racemase [Neisseria subflava NJ9703]
          Length = 352

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L+ N+  +  L GN +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNAQIRLDNLRQNYRFLKELHGN-KLLAVIKADAYGHGAVRCAHALADI-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+EGV+LR    +  I +L G+    E    D   +                        
Sbjct: 60  VDEGVELRQNGIKNPIVLLEGVFEAAEYADVDRYDLWPAIGSQWQLEAFVHHEWQHLTTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                +  +  +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYAAAYTALKQSESVENIVKFSHFACADEPENGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRDWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP   S                 + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++  S    +G  ++++G  I +++V+  +G   Y++L  I  R
Sbjct: 288 KRSRIIGRVSMDMITVELEASKE-GLGAEVELWGDVININEVSEVAGMIPYEILCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|134288204|ref|YP_001110367.1| alanine racemase [Burkholderia vietnamiensis G4]
 gi|134132854|gb|ABO59564.1| alanine racemase [Burkholderia vietnamiensis G4]
          Length = 365

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 23/367 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I    ++ N      L+  ++  AVVK NAYG G E++ P L +       +  
Sbjct: 3   RPIVARIFPKNVRENLGLARRLTCGSQVWAVVKANAYGHGIERVFPGLSD--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE V++R    +  I +L GI  P    ++ +  L   +  V QL   S+         
Sbjct: 61  LEEAVRVRALGWRKPILLLEGIFEPADLNVVVEHRLTVAVHCVDQLHMLSRSEP-RSPID 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG            + +        +++H A AD+        Q + F 
Sbjct: 120 IQLKMNSGMNRLGFRPDMYRQAWEEASDMSSIANIGLMTHFANADEGE---IDWQTDVFD 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAE 239
                  G   SLA+S+G+L  P  H    RPG  LYG +      H    P++  ++ E
Sbjct: 177 AATQGLPG-TRSLANSAGVLWHPQSHRDWVRPGTILYGTSPTGASRHVARFPLRAAMSLE 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ++II I+     E V YG     +R   I V A GYADGYP                G  
Sbjct: 236 SQIIGIQSISPSETVGYGRTFTGSRRMRIGVVACGYADGYPRHA-----------PTGTP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    ++G+++MDM   D+T   S  +G  ++++G ++ +DDVA ASGT  Y+L+ 
Sbjct: 285 VLVDGVRTQVVGRVSMDMMTVDLTPCPSANIGSRVELWGSNVSVDDVAEASGTIGYELIC 344

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 345 ALARRVP 351


>gi|299067425|emb|CBJ38624.1| alanine racemase 2, PLP-binding [Ralstonia solanacearum CMR15]
          Length = 368

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 93/361 (25%), Positives = 155/361 (42%), Gaps = 18/361 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I   AL NN   +   + ++R  AV+K NAYG G E+    L       F +  ++E V+
Sbjct: 2   IHGPALANNLQVVRRHAAHSRVWAVIKANAYGHGIERAYEGLRQ--ADGFGLLDLDEAVR 59

Query: 71  LRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR    Q  I +L G   P    ++    L   +    QL         G      L+++
Sbjct: 60  LRQLGWQGPILLLEGFFKPEDLALVEQYRLTTTVHCEEQLRMLELARLKG-PVSIQLKIN 118

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           TG +RLG +         ++         + ++H + AD P       QL  F       
Sbjct: 119 TGMSRLGFAPAAYRAAWEHARAISGIGTIVHMTHFSDADGPRGI--DHQLAAFEQATQGL 176

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILI 245
            G EASL++S+  L  P+ H    RPG+ LYG +        +   +   +T ++ +I I
Sbjct: 177 PG-EASLSNSAATLWHPSAHRDWVRPGVILYGASPTGVAADIEGTGLMPAMTLKSELIAI 235

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           +    G  + YG + +  +   I + A GYADGYP    G D  +           + G 
Sbjct: 236 QDVQPGATIGYGSRFEAEQPMRIGIVACGYADGYPRHAPGWDGNY-------TPVLVDGV 288

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
              ++G+++MDM   D+ +     VG  + ++G  + +D+VA A+GT  Y+L+  +  R 
Sbjct: 289 RTRMVGRVSMDMITVDLAEVPGARVGAPVTLWGQGLPIDEVAHAAGTVGYELMCALAPRV 348

Query: 366 A 366
            
Sbjct: 349 P 349


>gi|288926575|ref|ZP_06420492.1| Mur ligase domain protein/alanine racemase [Prevotella buccae D17]
 gi|288336652|gb|EFC75021.1| Mur ligase domain protein/alanine racemase [Prevotella buccae D17]
          Length = 831

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L+A+  N +   + +    +   ++K + YG G  +IA  L +  V    V   
Sbjct: 470 TTLEVNLSAVVKNLNHYRSFMKAETKLVCMIKADGYGAGAVEIAKTLQDHRVDYLAVAVA 529

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K         +P
Sbjct: 530 DEGVTLRRNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLEALIKAAEKEGITGYP 588

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG    Q+         ++       + SH   +D D     ++ Q   
Sbjct: 589 VHIKLDTGMHRLGFDPRQDMERLIDRLRHQNAIIPRSVFSHFVGSDNDGFDEFSARQFAL 648

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F              I   + +S+GI   P     + R G+ LYG   + N+   +  V 
Sbjct: 649 FDEGSKQLQAAFEHKILRHIDNSAGIEHFPERQLDMCRLGLGLYGINPRNNE--IIHNVS 706

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ +R+  AG+ V Y  +  L  DS++A   IGYADG    LS            
Sbjct: 707 TLKTTILQMRRVPAGDTVGYSRKTVLEHDSVVAAIPIGYADGLDRHLSNRH--------- 757

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y+
Sbjct: 758 -GYCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDIVDTIPYE 815

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 816 VLTGISNRVKRVY 828


>gi|218780053|ref|YP_002431371.1| alanine racemase [Desulfatibacillum alkenivorans AK-01]
 gi|218761437|gb|ACL03903.1| alanine racemase [Desulfatibacillum alkenivorans AK-01]
          Length = 363

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 105/369 (28%), Positives = 172/369 (46%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL AL +N+  +  L+    +  +VVK +AYG G ++ A  L + G     V    +
Sbjct: 6   LEIDLKALAHNYRVLADLAGPGTKMVSVVKADAYGHGLKQAARTLVDCGTYALGVFDPAD 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
              +R       I  L GI P + +     N+  VI S+      S+  +  G +    +
Sbjct: 66  AAVIRQEGIHVPIVSLSGIFPWEAEDAAKNNIDAVIFSMEAAQALSQAFLEKGETGNVII 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VDTG  RLG+  ++   F       K  +++ I SHLA ++ P       Q+E FR+  
Sbjct: 126 KVDTGMGRLGIFPEDLPAFVEALAPLKGIRVTGIASHLAASEIPDHPHTKSQVEAFRS-- 183

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTAEARIIL 244
           +    I  +LA+S  +L G      L RPGI+LYG             + V+T + RII 
Sbjct: 184 ASLSMINDTLANSGAVLEGLAKGVPLARPGIALYGSAPDPEMKGADLLKPVMTFKTRIIS 243

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           ++    G  +SYG     +R SLIA   +GYADGY   L+             G   + G
Sbjct: 244 LKTLPKGSPISYGMTFTTSRPSLIAAVPVGYADGYFRRLAN-----------KGVAIVHG 292

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVR 360
             VP++G + M++TM D+T    ++ GD + + G      +  D++A ++GT +Y++   
Sbjct: 293 KRVPVVGTVCMNLTMLDVTGLDEVQPGDEVVLLGEKDGQRVTGDELAASAGTISYEIYCS 352

Query: 361 IGTRYAKFY 369
           +G    + Y
Sbjct: 353 LGHANPRQY 361


>gi|298480379|ref|ZP_06998577.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. D22]
 gi|298273660|gb|EFI15223.1| Mur ligase domain protein/alanine racemase [Bacteroides sp. D22]
          Length = 846

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 149/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 487 LEVNLGAMVANLNHYRSMLRHPETKMICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 546

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 547 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 605

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 606 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSSQFDAFTRGQIELFE 665

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   + + R GI LYG +   N    +  V T 
Sbjct: 666 KGSQELQAAFSHKILRHICNTAGIERFPEAQYDMVRLGIGLYGVSPIDN--SIIHNVSTL 723

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 724 KTTILQIRDVPQEDTVGYSRMGHLVRPSRIAAIPIGYADGLNRHLG----------RGNA 773

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 774 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLETIPYEVL 832

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 833 TSISTRVKRVY 843


>gi|295086668|emb|CBK68191.1| alanine racemase [Bacteroides xylanisolvens XB1A]
          Length = 846

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 149/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 487 LEVNLGAMVANLNHYRSMLRHPETKMICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 546

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 547 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 605

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 606 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSSQFDAFTRGQIELFE 665

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   + + R GI LYG +   N    +  V T 
Sbjct: 666 KGSQELQAAFSHKILRHICNTAGIERFPEAQYDMVRLGIGLYGVSPIDN--SIIHNVSTL 723

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 724 KTTILQIRDVPQEDTVGYSRMGHLVRPSRIAAIPIGYADGLNRHLG----------RGNA 773

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 774 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLETIPYEVL 832

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 833 TSISTRVKRVY 843


>gi|160886878|ref|ZP_02067881.1| hypothetical protein BACOVA_04892 [Bacteroides ovatus ATCC 8483]
 gi|156107289|gb|EDO09034.1| hypothetical protein BACOVA_04892 [Bacteroides ovatus ATCC 8483]
          Length = 821

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 149/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+++L A+  N +   ++      +   +VK +AYG G  +IA +L    V    V   +
Sbjct: 462 LEVNLGAMVANLNHYRSMLRHPETKMICMVKASAYGAGSYEIAKSLQEHHVDYLAVAVAD 521

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPY 124
           EG +LR     A I ++        K +FD  L P + +   L    K        + P 
Sbjct: 522 EGSELRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPI 580

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
            +++DTG +RLG ++++         N+       + SH   +D          Q+E F 
Sbjct: 581 HVKLDTGMHRLGFAVEDIPLLIRRLKNQSAVIPRSVFSHFVGSDSSQFDAFTRGQIELFE 640

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +++GI   P   + + R GI LYG +   N    +  V T 
Sbjct: 641 KGSQELQAAFSHKILRHICNTAGIERFPEAQYDMVRLGIGLYGVSPIDN--SIIHNVSTL 698

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR     + V Y     L R S IA   IGYADG    L               
Sbjct: 699 KTTILQIRDVPQEDTVGYSRMGHLVRPSRIAAIPIGYADGLNRHLG----------RGNA 748

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++    T  Y++L
Sbjct: 749 YCLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDDLPITVLSDKLETIPYEVL 807

Query: 359 VRIGTRYAKFY 369
             I TR  + Y
Sbjct: 808 TSISTRVKRVY 818


>gi|86144171|ref|ZP_01062508.1| alanine racemase [Leeuwenhoekiella blandensis MED217]
 gi|85829433|gb|EAQ47898.1| alanine racemase [Leeuwenhoekiella blandensis MED217]
          Length = 365

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 138/367 (37%), Gaps = 19/367 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL AL +N+  +   L  + +   VVK  AYG     +A  L   G+    V    E
Sbjct: 6   LELDLNALSHNYDYLRSKLEPDVKMLGVVKAYAYGSASVAVAKKLEEKGIDYLAVAYTAE 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PYAL 126
           GV LR    +  I VL+      ++II       + S      F     + G+   P  +
Sbjct: 66  GVALREAGIKTPILVLHPQIENFDQIIKHQLEPSIYSFRVLKAFTEITEAQGLKAYPIHI 125

Query: 127 QVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + +TG NRLG   + E          + L   SL     A  D         Q+E F   
Sbjct: 126 KFNTGLNRLGFKDVNEKDILEQLHATEALKVKSLFSHLAASEDPNERTFTLQQIENFENN 185

Query: 186 ISHYK---GIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             H     G    L   ++S I+  P   F + R GI LYG  +   +   ++ V T + 
Sbjct: 186 AKHMIAGLGYTPMLHQSNTSAIINYPQAQFDMVRSGIGLYGYGNTQEEDLKLKPVATLKT 245

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  I     GE V Y       +    A   IG+ADG                   G  
Sbjct: 246 VISQIHDISIGETVGYNRAHTAAKLGRSATLPIGHADGISRAYG----------KGRGYV 295

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G   PI+G + MDM M D+T     E GD + IFG       ++    +  Y+L+  
Sbjct: 296 MINGKKAPIIGNVCMDMIMVDVTKI-DCEEGDEVVIFGKGASAVALSARIKSIPYELITA 354

Query: 361 IGTRYAK 367
           +  R  +
Sbjct: 355 VSQRIER 361


>gi|228473937|ref|ZP_04058678.1| alanine racemase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274451|gb|EEK13292.1| alanine racemase [Capnocytophaga gingivalis ATCC 33624]
          Length = 367

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 150/373 (40%), Gaps = 22/373 (5%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTS 64
             L+I L  L++N   +   L    R  AVVK N+YG     +A  L       +F V  
Sbjct: 4   TTLEIHLDNLQHNVRQLKKHLKEGTRFLAVVKANSYGNSSVAVAQYLEKKDLADEFAVAF 63

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--SH 122
             EG++LR       I + +       + I   NL P + S   +T +           +
Sbjct: 64  TSEGIELRKAGVTRPILIFHPQL-VDFEDIVRYNLEPTLYSKRLITHFIDFAKEKQLNQY 122

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNSVQLER 181
           P+ L+ ++G NRLG S++E  +       +++L   +     LA  D  +      Q+  
Sbjct: 123 PFHLKCNSGMNRLGFSVEEIDEACELLKGHEELKVRTAFSHLLASEDLQARPFMEKQIAL 182

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F+             I     ++SGIL  P  HF + R GI +YG  +        + + 
Sbjct: 183 FKAFQKKLENHFSHKIIYHNCNTSGILNYPEAHFDMVRSGIGMYGFANDPRLQKDFKPIT 242

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  I     G+ V Y    +  +   IA  ++G+ADG                  
Sbjct: 243 TLKSIISQIHTIQKGDYVGYNFGFQAQKPMEIATISVGHADGLNRIYG----------KE 292

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G  FIK    PI+G + MDM M DIT     E G+ + IF      + +A  + T +Y+
Sbjct: 293 VGFVFIKDKKCPIVGNVCMDMIMVDITGL-GCEEGEEVVIFDERHTSETLAETAKTISYE 351

Query: 357 LLVRIGTRYAKFY 369
           L+  +  R  + +
Sbjct: 352 LITSLSRRIKRVF 364


>gi|322412634|gb|EFY03542.1| alanine racemase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 366

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 155/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S         +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENIASAQEHIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   ++S+  L        
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAITHQVTVTVASLEWLAMAKPEWP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+GL     +D           ++  I +H A AD+  +     
Sbjct: 120 DLKGLKVHIKIDSGMGRIGLRSVTEVDNLIAGLKSMGTEVEGIFTHFATADEADTVKFEQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QL  F  L+       + +   +S+  L      F   R GI +YG      ++    P+
Sbjct: 180 QLTFFTNLVDQLADKPSLVHASNSATSLWHSETIFNAVRLGIVMYGLNPSGSELALPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +     E+ ++ +++   GE V YG   K      +    IGYADG+   + G       
Sbjct: 240 KEAFNLESVLVHVKEIAPGETVGYGATYKAQTREYVGTVPIGYADGWTRDMQGFT----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    ++G    I+G+++MD     +  +  +  G  + + G D    I   D+A 
Sbjct: 295 -------VLVEGQTCEIIGRVSMDQMTIRLPRAYPL--GTKVTLIGQDQEKVISATDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRIPRVY 366


>gi|332878007|ref|ZP_08445737.1| alanine racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332683969|gb|EGJ56836.1| alanine racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 822

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+ +N +   + +    +   +VK +AYG G  +IA  L +  V    V   
Sbjct: 461 TTLEVNLNAVVDNLNYYRSFMKPETKMVCMVKASAYGAGAVEIAKTLQDHQVDYLAVAVA 520

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     A I ++          +F+ +L P + S   L               P
Sbjct: 521 DEGVDLRKAGITANIMIMNPEMSS-FPTLFEYDLEPEVYSFRLLEALIHEAEKEGVTHFP 579

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG   + +          +       + SH   +D D     ++ Q E 
Sbjct: 580 IHVKLDTGMHRLGFDPEKDMPLLVERLKRQSAVIPRSVFSHFVGSDSDDFDAFSARQYEL 639

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F    +         I   + +S+GI   P+ H ++ R G+ LYG   + N+      + 
Sbjct: 640 FLKGSAQLQQAYSHKILRHICNSAGIEHFPDRHLEMVRLGLGLYGINSRNNEIL--HNIS 697

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ I +    + V Y  + +LTRDS IA   IGYADG    L             
Sbjct: 698 TLKTTILQIHEVPKEDTVGYSRKGRLTRDSRIAALPIGYADGLDRKLG----------CG 747

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
                + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++ A GT  Y+
Sbjct: 748 RAYCLVNGRRAPYVGNICMDVCMIDVTDI-DCREGDTAIIFGDDLPVTVLSDAVGTIPYE 806

Query: 357 LLVRIGTRYAKFY 369
           +L  +  R  + Y
Sbjct: 807 ILTGVSARVKRVY 819


>gi|313672870|ref|YP_004050981.1| alanine racemase [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939626|gb|ADR18818.1| alanine racemase [Calditerrivibrio nitroreducens DSM 19672]
          Length = 365

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 102/375 (27%), Positives = 166/375 (44%), Gaps = 25/375 (6%)

Query: 4   NEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAP-ALYNAGVQD 59
           N  LR     IDL    NN +    LS  +    V+K N YG G  ++A   L ++ ++ 
Sbjct: 2   NRSLRGTYALIDLKRYLNNLNIARKLS-KSYITPVIKANGYGHGAIELARFTLEHSDIRI 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIF--DTNLIPVISSVPQLTFYSKLMS 117
           F V + EEGVKLR    ++   ++ G            +  LI +        F   L  
Sbjct: 61  FCVATFEEGVKLRYGIGESAEIIVLGFVDEYFFNEVITNNLLINIYDDEIAFRFNKYLEK 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
             + +P ++++DTG NRLG    +          K    +  ++     + D      S+
Sbjct: 121 KRLKYPVSIKIDTGMNRLGF---DVSINFIEFREKYPNLVPKVLMSHLSSPDSDLDYTSL 177

Query: 178 QLERFRTLISHYKGIEASLAS---SSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           Q++RF ++    K I   + +   +S  LL     F  +RPGI  YG   K +    ++ 
Sbjct: 178 QIDRFSSVAERAKKIFPYIKTSLFNSPALLSFENSFDYSRPGILTYGFV-KSDHDIGIKP 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+   ++II ++     E V Y       + +++ V  IGYADGY   LS          
Sbjct: 237 VMKIFSKIIHVKSLDKNESVGYNRTYITGKKTILGVLPIGYADGYNRLLSNR-------- 288

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
              G  ++ GY  PI+G+I MDMTM DI+D    + G  ++I G +I+ D++A    T +
Sbjct: 289 ---GFVYVDGYKCPIVGRICMDMTMIDISDLPEGKWGKEVEILGDNIRADEMAKMCNTIS 345

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  I  R  + Y
Sbjct: 346 YEILTSISPRIPRIY 360


>gi|319789312|ref|YP_004150945.1| alanine racemase [Thermovibrio ammonificans HB-1]
 gi|317113814|gb|ADU96304.1| alanine racemase [Thermovibrio ammonificans HB-1]
          Length = 357

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 162/367 (44%), Gaps = 26/367 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVE 66
             ++ L  L  N+  +  LSG  +  AVVK NAYG G   +A  L     V  F V +  
Sbjct: 4   WAEVHLDRLLYNYRQVEKLSGPKKLIAVVKANAYGHGSVAVARFLQEQTAVSAFAVATYA 63

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV+LR    Q  I V+      +     +  L+PV+       F+    +  +  P+ +
Sbjct: 64  EGVQLREAGIQRPIIVMSSTLEEELGRAREFRLMPVVYD-----FWELERAKELEVPFHV 118

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG  RLG    +  +      + +  +L+ +++H   AD+      + Q + F   +
Sbjct: 119 KLDTGMGRLGFLPSQWQELLC---SLRGAKLAGVMTHFPSADEDP-EFTAGQAKLFGEFV 174

Query: 187 SHYKGIEASLASSSGIL----LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
              KG    L           LG N  F  +R G++LYG          ++ V+  +ARI
Sbjct: 175 KALKGAFPKLWVHCDNSAALPLGLNGLFTHSRVGLALYGSKPFGGYPASLKQVMEVKARI 234

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +++   G  VSYG     +    + V + GYADG P +LSG            G   +
Sbjct: 235 ISVKELPPGHSVSYGRTYTTSGKERVGVVSFGYADGLPRSLSGR-----------GSFIV 283

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G   PI G++ MDMT+  +   ++ + G    + G ++  +++A  +GT  Y+L+ RI 
Sbjct: 284 NGRRCPIRGRVCMDMTVISLEGVVAGKGG-VATVTGLELPFEELARLAGTIPYELMCRIS 342

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 343 PRVERVY 349


>gi|24112577|ref|NP_707087.1| alanine racemase [Shigella flexneri 2a str. 301]
 gi|30062707|ref|NP_836878.1| alanine racemase [Shigella flexneri 2a str. 2457T]
 gi|24051477|gb|AAN42794.1| alanine racemase 2 [Shigella flexneri 2a str. 301]
 gi|30040955|gb|AAP16685.1| alanine racemase 2 [Shigella flexneri 2a str. 2457T]
 gi|281600603|gb|ADA73587.1| Alanine racemase [Shigella flexneri 2002017]
 gi|313649368|gb|EFS13799.1| alanine racemase [Shigella flexneri 2a str. 2457T]
 gi|332760272|gb|EGJ90562.1| alanine racemase [Shigella flexneri K-671]
 gi|333019431|gb|EGK38714.1| alanine racemase [Shigella flexneri K-304]
          Length = 356

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQSDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGAP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|283832821|ref|ZP_06352562.1| alanine racemase [Citrobacter youngae ATCC 29220]
 gi|291071417|gb|EFE09526.1| alanine racemase [Citrobacter youngae ATCC 29220]
          Length = 356

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL ALK N       + +AR  +VVK NAYG G E++  AL       F + +
Sbjct: 3   RPILASIDLQALKQNLAITRQAAPDARVWSVVKANAYGHGIERVWNAL--GTTDGFAMLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G     +  ++D   +             +          
Sbjct: 61  LEEAITLRERGWKGPILMLEGFFHADDLKVYDKYRLTTCVHSNWQLKALQNARLNAPLDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG                       ++SH A A+ P+    ++       
Sbjct: 121 YLKVNSGMNRLGFLPDRVSTVWQQLRAMPNVGEMTLMSHFADAEHPNGIQEAMTRI---A 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QATEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLKPVMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I+   AG+ V YGG+   + +  I + A GYADGYP                G   
Sbjct: 238 EIIGIQTLKAGDRVGYGGRYTASGEQRIGIVATGYADGYPRHA-----------PSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+  
Sbjct: 287 LVDGVRTTTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVASAAGTVGYELMCS 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LALRVP 352


>gi|299822355|ref|ZP_07054241.1| alanine racemase [Listeria grayi DSM 20601]
 gi|299815884|gb|EFI83122.1| alanine racemase [Listeria grayi DSM 20601]
          Length = 368

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 85/378 (22%), Positives = 155/378 (41%), Gaps = 28/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++++  A++ N  +  A         AVVK NAYG G  ++A    +AG   F V
Sbjct: 6   HRPTWIEVNGDAIRANITNEKAHLPAETAVWAVVKANAYGHGIIEVAKIAKSAGADGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR     + + ++ G  P +   +     I +  ++    + ++L       
Sbjct: 66  AILDEALALREAGFTSELILVLGAVPAEYANLAAEKQISL--TLFDENWLTELPVLTAKL 123

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLER 181
              +++DTG  RLG    EAL         + L +   I +H A AD   +     QL +
Sbjct: 124 SLHVKLDTGMGRLGFRNGEALKRVSTKLAEQPLLEWEGIYTHFATADQKDTTYYEEQLAK 183

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
           F  L S  K     +   +SS  LL     F   R GI++YG T            +Q  
Sbjct: 184 FEGLFSEIKPRPRFVHVANSSAALLHDQTGFNAVRFGIAMYGLTPSDEIADILPFELQPA 243

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++   +I+ +++  AG+ VSYG   +  ++  +A   IGYADG+    +G          
Sbjct: 244 LSLYTKIVQVKQLQAGDCVSYGATYQAAQEEWVATLPIGYADGWIRKYTGFSL------- 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
                 ++G    I+G++ MD  +  +     +  G  + + G      I  ++ A    
Sbjct: 297 -----LVEGEYAEIVGRVCMDQLIIRLPRYYPV--GTKVTLIGKSGEKQITAEEAARKIE 349

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y++   +  R  + Y
Sbjct: 350 TIDYEVTCLLSERIPRIY 367


>gi|257878844|ref|ZP_05658497.1| alanine racemase [Enterococcus faecium 1,230,933]
 gi|257881480|ref|ZP_05661133.1| alanine racemase [Enterococcus faecium 1,231,502]
 gi|257890702|ref|ZP_05670355.1| alanine racemase [Enterococcus faecium 1,231,410]
 gi|258615086|ref|ZP_05712856.1| alanine racemase [Enterococcus faecium DO]
 gi|293560263|ref|ZP_06676760.1| alanine racemase [Enterococcus faecium E1162]
 gi|294621797|ref|ZP_06700956.1| alanine racemase [Enterococcus faecium U0317]
 gi|314938934|ref|ZP_07846199.1| alanine racemase [Enterococcus faecium TX0133a04]
 gi|314943515|ref|ZP_07850282.1| alanine racemase [Enterococcus faecium TX0133C]
 gi|314948190|ref|ZP_07851584.1| alanine racemase [Enterococcus faecium TX0082]
 gi|314951550|ref|ZP_07854596.1| alanine racemase [Enterococcus faecium TX0133A]
 gi|314991587|ref|ZP_07857063.1| alanine racemase [Enterococcus faecium TX0133B]
 gi|314994920|ref|ZP_07860047.1| alanine racemase [Enterococcus faecium TX0133a01]
 gi|257813072|gb|EEV41830.1| alanine racemase [Enterococcus faecium 1,230,933]
 gi|257817138|gb|EEV44466.1| alanine racemase [Enterococcus faecium 1,231,502]
 gi|257827062|gb|EEV53688.1| alanine racemase [Enterococcus faecium 1,231,410]
 gi|291598629|gb|EFF29687.1| alanine racemase [Enterococcus faecium U0317]
 gi|291605713|gb|EFF35150.1| alanine racemase [Enterococcus faecium E1162]
 gi|313590902|gb|EFR69747.1| alanine racemase [Enterococcus faecium TX0133a01]
 gi|313593871|gb|EFR72716.1| alanine racemase [Enterococcus faecium TX0133B]
 gi|313596244|gb|EFR75089.1| alanine racemase [Enterococcus faecium TX0133A]
 gi|313597887|gb|EFR76732.1| alanine racemase [Enterococcus faecium TX0133C]
 gi|313641643|gb|EFS06223.1| alanine racemase [Enterococcus faecium TX0133a04]
 gi|313645323|gb|EFS09903.1| alanine racemase [Enterococcus faecium TX0082]
          Length = 373

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAIETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++      
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAVLEKSKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD       ++Q
Sbjct: 126 TPLSIHLKADTGMGRIGFCTPEEVKEAAAFIKESRVLEWEGLFTHFSTADQADDTYWNLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFIEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+P  + G        
Sbjct: 246 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWPRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + D+A  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDIADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|205352531|ref|YP_002226332.1| D-amino acid dehydrogenase-Alanine racemase fusion protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205272312|emb|CAR37191.1| D-amino acid dehydrogenase-Alanine racemase fusion protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|326627589|gb|EGE33932.1| D-amino acid dehydrogenase-Alanine racemase fusion protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 793

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 440 RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 496

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 497 NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 556

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 557 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 616

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 617 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 673

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 674 SEIIGVQTLNAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 722

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 723 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 782

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 783 AVAPRVP 789


>gi|257867063|ref|ZP_05646716.1| alanine racemase [Enterococcus casseliflavus EC30]
 gi|257873398|ref|ZP_05653051.1| alanine racemase [Enterococcus casseliflavus EC10]
 gi|257801119|gb|EEV30049.1| alanine racemase [Enterococcus casseliflavus EC30]
 gi|257807562|gb|EEV36384.1| alanine racemase [Enterococcus casseliflavus EC10]
          Length = 373

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/380 (20%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  ID TA+  N    +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAIIDTTAITENIKHEIAHLPSETFLFAVVKANGYGHGAVQTALAAKEGGADGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM---SCG 119
            +++E ++LR       I +L  ++     ++   +L   ++S+  L      +      
Sbjct: 66  ATIDEAIELREAGITDPILILGVVNVCDITLLTTYDLSFPVASMDWLIEAGAYLEENPLN 125

Query: 120 VSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 ++VDTG  R+G  +++E         +    +   I +H + AD   +     Q
Sbjct: 126 KPLKVHIKVDTGMGRIGFLTVEEVRQAILWLEDHPSFEWEGIFTHFSTADQADTSYWETQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            +RF+ +++    +   +   +S+  L        + R GI++YG       +++   ++
Sbjct: 186 HQRFKEVLTVLPYLPTYIHTGNSATSLWHKEAVGNMVRFGIAMYGLNPSGHALSEPFSLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + +I ++    G  + YG      R   I    IGYADG+   + G        
Sbjct: 246 PALSLVSELIQVKLLEKGAGIGYGETYITPRQEWIGTVPIGYADGWLRKMQGFSI----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALA 349
                   ++G    I+G++ MD  M  +  +    VG  + +     G  I + DVA  
Sbjct: 301 -------LVEGERCEIVGRVCMDQLMIRLPRAF--AVGTPVTLIGENHGEQITMQDVADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y++   +  R  + Y
Sbjct: 352 LETIHYEVACTLSARIPREY 371


>gi|193215478|ref|YP_001996677.1| alanine racemase [Chloroherpeton thalassium ATCC 35110]
 gi|193088955|gb|ACF14230.1| alanine racemase [Chloroherpeton thalassium ATCC 35110]
          Length = 387

 Score =  262 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 I L  L++N   + A  G +R   A+VK NAYG    K+APAL   GV DF V 
Sbjct: 17  NLSEALISLGNLRHNARQIKAQIGQSRRLMAIVKANAYGHNAGKVAPALVQEGVSDFGVA 76

Query: 64  SVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--LM 116
           ++ E + LR         +    + +      +   +  + I +  +  +    ++    
Sbjct: 77  NINEAIHLRKALQAAQAREDSQILAFASPLECQMPFYLQHEIDLTVTNFETAKLAEAVSK 136

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           + G +    L++DTG  RLG+  +E               L  I +H + + +       
Sbjct: 137 NHGKNLTVHLKIDTGMGRLGIQPREGFALARYVEASPYLNLKGIYTHFSDSGEDL-AFTR 195

Query: 177 VQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKS 229
            QLE ++ L+S ++      +    A+S  I+   + +  + RPGI LYG T    +  +
Sbjct: 196 NQLEIYKKLVSEFEHEAKRTVLKHAANSGAIISDNDTYLDMVRPGILLYGYTPAKSLTTA 255

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+  +A ++  +    G  VSYG +   TR + +A  ++GYADGY   LS     
Sbjct: 256 LDLRRVMQFQAHVLFTKWVEKGATVSYGRRWIATRRTRVATVSVGYADGYHRALSN---- 311

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVAL 348
                    K  I G +   +G +TMD  M  + +  S++VGD + +FG   +  +D+A 
Sbjct: 312 -------KAKVCINGNLYEQIGSVTMDQIMVSLGEDSSVQVGDPVVLFGWDGLGANDLAE 364

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT  Y+LL  +  R  + +
Sbjct: 365 QIGTIGYELLCAVSPRVKRVF 385


>gi|261340176|ref|ZP_05968034.1| alanine racemase [Enterobacter cancerogenus ATCC 35316]
 gi|288317692|gb|EFC56630.1| alanine racemase [Enterobacter cancerogenus ATCC 35316]
          Length = 356

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 161/371 (43%), Gaps = 24/371 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QD 59
           M      +L  DL ALK+N   +   +  +R  +VVK NAYG G ++I  AL   G    
Sbjct: 1   MSRPVLAQL--DLQALKDNLQIVRRAAPGSRVWSVVKANAYGHGIDRIWGAL---GATDG 55

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F + +++E + LR    +  I +L G     +  + D   +             +     
Sbjct: 56  FALLNLDEAILLRERGWKGPILLLEGFFHADDLPLLDKYRLTTSLHSNWQIKALQDAKLH 115

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+V++G NRLG   +          N K      +++H A A+ P    +++  
Sbjct: 116 APLDIYLKVNSGMNRLGFQPERVHTVWQQLRNLKNVGEMTLMAHFADAEKPDGIADAMVR 175

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTV 235
                  +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V
Sbjct: 176 V---EQAAEGLDCPRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWQDIANSGLKPV 232

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  + II ++   AG+ V YG + + T +  I + A GYADGYP               
Sbjct: 233 MTLRSEIIGVQTLKAGDTVGYGSRYRATGEQRIGIVACGYADGYPRIA-----------P 281

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G   ++ G     +G ++MDM   D+T      +G  ++++G ++K+DDVA A+GT  Y
Sbjct: 282 SGTPVWVDGVRTGTVGTVSMDMMAIDLTPCPQAGIGTPVELWGNEVKIDDVASAAGTVGY 341

Query: 356 DLLVRIGTRYA 366
           +L+  +  R  
Sbjct: 342 ELMCALAPRVP 352


>gi|148984140|ref|ZP_01817435.1| alanine racemase [Streptococcus pneumoniae SP3-BS71]
 gi|147923429|gb|EDK74542.1| alanine racemase [Streptococcus pneumoniae SP3-BS71]
 gi|301800506|emb|CBW33145.1| alanine racemase [Streptococcus pneumoniae OXC141]
          Length = 367

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKVLIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       +N  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLNLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|313893858|ref|ZP_07827424.1| alanine racemase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441422|gb|EFR59848.1| alanine racemase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 374

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 167/382 (43%), Gaps = 25/382 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           ++     L I+ + ++ N   +  +L   + + AV+K N YG G   +       G +  
Sbjct: 3   NTMRPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESL 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V   EE V LR       I++L    P   +++ DTN IP +     L    K+  +  
Sbjct: 63  AVAIPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLDALDKVADNHD 122

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +    A+ VDTG +R+G+  ++A++F     + +  ++    SH++ AD         Q 
Sbjct: 123 MIIRIAVAVDTGMHRIGIKPEDAVEFIKRVESYENLEVDGFFSHMSNADAADQTHAHSQA 182

Query: 180 ERFRTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HP 231
            +F  ++   K    +      LA+S+G+L   +  F   RPGI  YG    ++      
Sbjct: 183 MKFHRMVDEIKAFRPNADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLG 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V++  + ++ ++   AGE + YG          IA   +GYADGYP +LS       
Sbjct: 243 LKPVLSFHSEVVHVQHVPAGEGIGYGSTYVTPEPMTIATIPVGYADGYPRSLSNR----- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                 G   I G   P++G+I MD  M  + D+++++ GD + + G      I   ++A
Sbjct: 298 ------GTVLIHGTRCPVVGRICMDQFMVAVPDTITVKPGDKVVLLGSQGHESISALEIA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             + T  Y++      R  + Y
Sbjct: 352 ALASTIPYEIFCGFSERVPRQY 373


>gi|226939283|ref|YP_002794354.1| DadB [Laribacter hongkongensis HLHK9]
 gi|254802367|sp|C1DBE8|ALR_LARHH RecName: Full=Alanine racemase
 gi|226714207|gb|ACO73345.1| DadB [Laribacter hongkongensis HLHK9]
          Length = 359

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 163/371 (43%), Gaps = 25/371 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV-- 62
             +R  +DL A+++N+    A S  +   AV+K +AYG G E++A AL         V  
Sbjct: 3   RPIRATLDLAAIRHNYQQAKACSPESFAFAVIKADAYGHGYEQVAAAL----AVWPTVLP 58

Query: 63  -TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
            ++      LR    +  I +L G     E        + V         + K  S    
Sbjct: 59  SSTSSRARTLREAGLRQPILLLEGCFDRAELEEAARLQLTVPFHAAHQFDWLKQGSLPAP 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+++TG NRLG    EA         +   +L+ +++H A AD       + QL R
Sbjct: 119 LEVMLKLNTGMNRLGFRPDEAPRAAAWLQARNDIRLAGLMTHFATAD--GDPGIAAQLSR 176

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTA 238
           F   ++   G+ + +A+S+ ++  P    Q  RPGI LYG +   ++S     ++  +  
Sbjct: 177 FDE-VNASLGLPSCVANSAALMRHPASRRQYVRPGIMLYGASPFADQSAAELGLRPAMRL 235

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA II ++   AG+ V YG      R   I V A GYADGYP                G 
Sbjct: 236 EADIIGVQSLQAGDAVGYGATFVADRPMRIGVVACGYADGYPR-----------VAPAGT 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDDVALASGTTNYDL 357
              I G    ++G+++MDM   D+T      VGD + ++ G  + +DDVA A+GT  Y+L
Sbjct: 285 PCAIGGQPARLVGRVSMDMLTIDLTSLPQAGVGDRVTLWGGDGVSIDDVATAAGTIGYEL 344

Query: 358 LVRIGTRYAKF 368
           +  +  R  + 
Sbjct: 345 MCALAPRVPRR 355


>gi|91210403|ref|YP_540389.1| alanine racemase [Escherichia coli UTI89]
 gi|117623404|ref|YP_852317.1| alanine racemase [Escherichia coli APEC O1]
 gi|218558114|ref|YP_002391027.1| alanine racemase [Escherichia coli S88]
 gi|237705146|ref|ZP_04535627.1| alanine racemase 2 [Escherichia sp. 3_2_53FAA]
 gi|91071977|gb|ABE06858.1| alanine racemase 2, catabolic [Escherichia coli UTI89]
 gi|115512528|gb|ABJ00603.1| alanine racemase 2, catabolic [Escherichia coli APEC O1]
 gi|218364883|emb|CAR02579.1| alanine racemase 2, PLP-binding [Escherichia coli S88]
 gi|222032985|emb|CAP75725.1| lanine racemase, catabolic [Escherichia coli LF82]
 gi|226899903|gb|EEH86162.1| alanine racemase 2 [Escherichia sp. 3_2_53FAA]
 gi|294490907|gb|ADE89663.1| alanine racemase [Escherichia coli IHE3034]
 gi|307627292|gb|ADN71596.1| alanine racemase [Escherichia coli UM146]
 gi|312945816|gb|ADR26643.1| alanine racemase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315288597|gb|EFU47995.1| alanine racemase [Escherichia coli MS 110-3]
 gi|323949699|gb|EGB45585.1| alanine racemase [Escherichia coli H252]
          Length = 356

 Score =  262 bits (669), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|315221233|ref|ZP_07863156.1| alanine racemase [Streptococcus anginosus F0211]
 gi|315189592|gb|EFU23284.1| alanine racemase [Streptococcus anginosus F0211]
          Length = 368

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 153/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  +DL A+  N   + A   N     AVVK +AYG G   +      + V
Sbjct: 1   MKTSNHRPTKAVVDLAAISFNIKQIAAHIPNDVEKWAVVKADAYGHGAVAVTRY-IESIV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E V+LR      +I VL         +  +  +   ++S+  +    K   
Sbjct: 60  DGFCVSNIDEAVELRDAGITKKILVLGVSDVHAISLAIERKVTCTVASLEWIDLLLKSNI 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
              S    +++D+G  R+G    +      +   K   Q+  I +H A AD+  +H    
Sbjct: 120 DVASLVVHIKIDSGMGRIGFRDSQDAQEAIHRLEKAGAQVEGIFTHFATADEADTHKFEA 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL RF+ ++   + +   +   +S+  L       +  R G  +YG       +   + M
Sbjct: 180 QLARFKEILEQLETVPPIVHASNSATTLWHAETVMKAVRLGDIIYGLNPSGRTLQLPYEM 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + ++ +++  AG  V YG          I    +GYADG+   + G +     
Sbjct: 240 KPALSLVSELVHVKQLEAGADVGYGATYTSENSQYIGTIPLGYADGWTRDMQGFN----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                    I G   PI+G+++MD     +  +    +G  +   G      I   DVA 
Sbjct: 295 -------VLIDGQPCPIVGRVSMDQITVRLPKAYP--IGTPVVFIGESSKKSISATDVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  I  R  + Y
Sbjct: 346 KRGTINYEVVCLISDRVPRVY 366


>gi|309798696|ref|ZP_07692961.1| alanine racemase [Streptococcus infantis SK1302]
 gi|308117639|gb|EFO55050.1| alanine racemase [Streptococcus infantis SK1302]
          Length = 367

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 158/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V
Sbjct: 1   MKTSPHRPTKALIHLEAIRYNIQQMGAHIPQDTLKWAVVKANAYGHGAVAVAMAIQD-DV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR      +I +L         +  D ++   ++ +  +       S
Sbjct: 60  YGFCVSNIDEAIELRQAGISKKILILGVSEVESLSLAKDFDITLTVAGLEWIQKLIATES 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L++D+G  R+G       +       +    +  I +H A AD+ S      
Sbjct: 120 DLSGLTVHLKIDSGMGRIGFRSASEAEEAQTLLKEHGANVEGIFTHFATADEESDSYFKE 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QLE F+ +++  + +      ++S+  L      F   R G S+YG       +   + +
Sbjct: 180 QLEFFKEILAGLQEVPELVHASNSATTLWHAETIFSAVRMGDSMYGLNPSGQVLKLPYEL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T E+ I+ ++   AG  + YG   +   + +IA   IGYADG+   +         
Sbjct: 240 KPALTLESAIVHVKTVPAGACMGYGATYQADGEQVIATVPIGYADGWTRDMQNFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G     +I   +VA+
Sbjct: 295 -------VLVDGQLCPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATNVAV 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY+++  +  R  + Y
Sbjct: 346 YRGTINYEVVCLLSDRIPREY 366


>gi|260558409|ref|ZP_05830605.1| alanine racemase [Enterococcus faecium C68]
 gi|260075583|gb|EEW63889.1| alanine racemase [Enterococcus faecium C68]
          Length = 373

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 151/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAIETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++      
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAVLEKSKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD       ++Q
Sbjct: 126 TPLSIHLKADTGMGRIGFCTPEEVKEAAAFIKESRVLEWEGLFTHFSTADQADDTYWNLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFIEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I I+K  AGE + YG     +    I    IGYADG+P  + G        
Sbjct: 246 PALELVSELIQIKKLPAGEGIGYGETYITSEAEWIGTIPIGYADGWPRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + D+A  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDIADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|330995980|ref|ZP_08319874.1| alanine racemase [Paraprevotella xylaniphila YIT 11841]
 gi|329573977|gb|EGG55555.1| alanine racemase [Paraprevotella xylaniphila YIT 11841]
          Length = 822

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 96/373 (25%), Positives = 155/373 (41%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+ +N +   + +    +   +VK +AYG G  +IA  L +  V    V   
Sbjct: 461 TTLEVNLNAVVDNLNYYRSFMKPETKMVCMVKASAYGAGAVEIAKTLQDHQVDYLAVAVA 520

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     A I ++          +F+ +L P + S   L   +           P
Sbjct: 521 DEGVDLRKAGITANIMIMNPEMSS-FPTLFEYDLEPEVYSFRLLEALTHEAEKEGVTHFP 579

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG   + +          +       + SH   +D D     ++ Q E 
Sbjct: 580 IHVKLDTGMHRLGFDPEKDMPLLVERLKRQSAVIPRSVFSHFVGSDSDDFDAFSARQYEL 639

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F    +         I   + +S+GI   P  H ++ R G+ LYG   + N+      V 
Sbjct: 640 FLKGSAQLQQAYSHKILRHICNSAGIEHFPERHLEMVRLGLGLYGINSRNNEIL--HNVS 697

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ I +    + V Y  + +LTRDS IA   IGYADG    L             
Sbjct: 698 TLKTTILQIHEVPKEDTVGYSRKGRLTRDSRIAALPIGYADGLDRKLG----------CG 747

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
                + G   P +G I MD+ M D+TD      GD   IFG D+ +  ++ A GT  Y+
Sbjct: 748 RAYCLVNGQRAPYVGNICMDVCMIDVTDI-DCREGDTAIIFGDDLPVTVLSDAVGTIPYE 806

Query: 357 LLVRIGTRYAKFY 369
           +L  +  R  + Y
Sbjct: 807 ILTGVSARVKRVY 819


>gi|114766132|ref|ZP_01445136.1| alanine racemase [Pelagibaca bermudensis HTCC2601]
 gi|114541592|gb|EAU44634.1| alanine racemase [Roseovarius sp. HTCC2601]
          Length = 345

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 124/365 (33%), Positives = 187/365 (51%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +L IDL A++ NW ++  L+      AVVK +AYGLG +K+AP L +AG + FFV    
Sbjct: 4   AQLSIDLAAIRANWRALADLTTG-EAGAVVKADAYGLGVDKVAPVLADAGAKRFFVAIAS 62

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR        I V  G   G  + +   NL+P+I+S+ Q+    + +     HP+ 
Sbjct: 63  EGVTLRRVLGEGPEICVFSGHMKGDAEALRAANLVPMINSIDQML---RHVEALPGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +  +   +  L++SHLACAD+P   +N++QL  FR +
Sbjct: 120 IQLDSGMNRLGMEPSEWAALREIALAQ---KPRLVMSHLACADEPEHGMNALQLRTFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                    SL+++ GIL+GP+YHF+LTRPGI +YGG    + +     VV     +I  
Sbjct: 177 TDDIDA-PRSLSATGGILMGPDYHFELTRPGIGIYGGLPFADAT----PVVELMLPVIQT 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   GE V YG        + +A  A GYADG    L              G  +    
Sbjct: 232 REVTPGESVGYGNAWVARVPTKVATIAAGYADGIHRAL-----------AKKGYVWAGNT 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
              ILG+++MD+   D+T    +     +++ G    +D VA A GT  Y++L  +G RY
Sbjct: 281 RCKILGRVSMDLITIDVTTLKEVPE--QVELLGQKQSVDTVADAIGTIGYEVLTSLGNRY 338

Query: 366 AKFYT 370
           A+ YT
Sbjct: 339 ARTYT 343


>gi|257063503|ref|YP_003143175.1| alanine racemase [Slackia heliotrinireducens DSM 20476]
 gi|256791156|gb|ACV21826.1| alanine racemase [Slackia heliotrinireducens DSM 20476]
          Length = 434

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 101/386 (26%), Positives = 158/386 (40%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +  +++DL A++NN   +  +     R  AVVK + YG G  ++A A   AG     V
Sbjct: 58  QRWSWVEVDLGAIRNNVQVVKRIIPAGCRFMAVVKADGYGHGAVEVARASIAAGANQLAV 117

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVS 121
             V E V+LR     A I VL         ++   +++P + S    + +       G+ 
Sbjct: 118 AGVYEAVELRKAGITAPILVLSEPPAESIPLLLAYDIMPSVYSAEFAIAYAEMADLHGMR 177

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            PY L V+TG NR+G+   E +DF       +        +H A AD   +   S+Q  R
Sbjct: 178 APYHLAVNTGMNRIGVRFDEVIDFCRQVEFHRALDRVGTFTHFATADCAETFDFSLQFRR 237

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQT 234
           F  +I   + +         A+S+  L  P  H  + R GISLYG    I       ++ 
Sbjct: 238 FCEVIDGMRQVGLDPGIVHCANSAATLRYPQTHLDMVRFGISLYGYHPCIETRGHFDLRP 297

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  +      E VSYG   +      I    +GYADG+   LSG  +      
Sbjct: 298 AMSLHARITAVNTPPMSEGVSYGLHYRSPGSVKICAVPVGYADGFSRGLSGRTAF----- 352

Query: 295 FLGGKGFIKGYMVPILGKITMDMTM--FDITDS-----LSIEVGDYIQIFGPD----IKL 343
                    G +   +G I MD  M   D+  S     L   VGD + +FG      I +
Sbjct: 353 ------IYGGRLCKQVGNICMDQCMFEVDLRTSAMRSRLDPHVGDEVVLFGSKDGCTIYV 406

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +D+     T  ++++  +  R  K Y
Sbjct: 407 EDLCDVLNTIPHEIICAMSLRMPKVY 432


>gi|255536698|ref|YP_003097069.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Flavobacteriaceae bacterium
           3519-10]
 gi|255342894|gb|ACU09007.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-
           diaminopimelate--D-alanyl-D- alanyl ligase
           [Flavobacteriaceae bacterium 3519-10]
          Length = 813

 Score =  262 bits (669), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 90/369 (24%), Positives = 153/369 (41%), Gaps = 19/369 (5%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   +L     +  A+VK  +YGLG  +IA  L +  +    V   +E
Sbjct: 453 LEVNLNAVLHNINVHKSLLKPKTKMMAMVKAYSYGLGGYEIAEFLQHHHIDYLGVAYADE 512

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDT--NLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           G  LR       I V+       + II       I     +               +P  
Sbjct: 513 GADLRKNGISVPIMVMNPEQHSYDSIIEHHLEPEIYSFRVLDLFNQQLIRKGADKDYPIH 572

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++++TG NRLG    E  +         +   S+         +   +    Q+E+F+++
Sbjct: 573 IKLETGMNRLGFREDEIDELAARLAKMDVKVASVFSHLSTADSEEEHNYTMHQIEKFQSI 632

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +             + +SSGI    +Y F++ R GI + G T      + ++ VV+ ++
Sbjct: 633 STRLAEKLKYEPIRHILNSSGIANYADYQFEMVRIGIGMVGITSNEQIKNQLRNVVSFKS 692

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  I +  AG+ V Y  + K T+ + IA   +GYADG P  +              G  
Sbjct: 693 VISQISEINAGDSVGYDRKYKATKRTRIATIPVGYADGVPRMIGNGI----------GHV 742

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I G + PI+G I MDM M ++ D  S + GD + IF     L + +    T  Y++L  
Sbjct: 743 SISGNLYPIVGNICMDMMMVEVGD-SSAKEGDEVIIFNSKPSLAEFSDYCKTIPYEVLTS 801

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 802 ISRRVKRVY 810


>gi|116511664|ref|YP_808880.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125695|sp|Q030B4|ALR_LACLS RecName: Full=Alanine racemase
 gi|116107318|gb|ABJ72458.1| alanine racemase [Lactococcus lactis subsp. cremoris SK11]
          Length = 367

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 155/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +      +DL A++NN          NA     VK +AYG G  +++ A+ +  V
Sbjct: 1   MKTSPHRNTSAIVDLKAIRNNIEKFKKHINPNAEIWPAVKADAYGHGSVEVSKAVSDL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR +     I VL GI P    I    N+     S+  L    +  +
Sbjct: 60  GGFCVSNLDEAIELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPSLEWLKLVVQEEA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   + VD+G  R+G+   E  +      +K       I +H A AD         
Sbjct: 120 ELSDLKIHIGVDSGMGRIGIRDVEEANQMIELADKYAINFEGIFTHFATADMADETKFKN 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           Q  RF  +++        +   +++  L        + R GIS+YG       +     +
Sbjct: 180 QQARFNKIMAGLSRQPKFIHSTNTAAALWHKEQVQAIERLGISMYGLNPSGKTLELPFEI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + +  I+K  AGE V YG   + + ++ I    IGYADG+   + G       
Sbjct: 240 EPALSLVSELTHIKKIAAGETVGYGATYETSEETWIGTVPIGYADGWTRQMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  + G    I+G++ MD  M  +  S  +  G  + + G D    I   DVA 
Sbjct: 294 ------KVLVDGKFCEIVGRVCMDQMMIKLDKSYPL--GTKVTLIGRDKANEITTTDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 WRGTINYEVLCLLSDRIKRIY 366


>gi|254437149|ref|ZP_05050643.1| alanine racemase [Octadecabacter antarcticus 307]
 gi|198252595|gb|EDY76909.1| alanine racemase [Octadecabacter antarcticus 307]
          Length = 345

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 131/363 (36%), Positives = 190/363 (52%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL AL +NW S++A++ +  T AVVK N YGLG  K+  AL  AGV+ FFV   +EG
Sbjct: 6   LSVDLDALSSNWRSLDAMT-DVETCAVVKANGYGLGVAKVGRALMKAGVKRFFVAVAQEG 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V LR    P   I +  G   G   +I D  L P+I++V Q    ++ +     HP+ +Q
Sbjct: 65  VTLRQALGPNVEICIFAGHMRGDTDMIADMMLTPIINTVGQ---LTRHLEALPEHPFGVQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL + E       + ++      L++SHLACAD P   +N  QL++F  +  
Sbjct: 122 IDTGMNRLGLEIDEWASVAEIALSQ---NCRLVMSHLACADTPDHPMNRQQLDQFHLMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILLGP YHF +TRPGI LYGG    +        +     +I +R 
Sbjct: 179 G-INVPRSLAATGGILLGPEYHFDMTRPGIGLYGGAPFTDALPVAYLDL----PVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y       R S IA  + GYADG    LS            G   +     V
Sbjct: 234 VNVGETVGYANAWTAQRQSKIATVSGGYADGLTRALS-----------AGANLWHGAQAV 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+++MD+   D+TD   +  G  + I GPD  +D +A  +GT  Y++L  +G+RY +
Sbjct: 283 PLVGRVSMDLITADVTDLPEL-PG-VLSILGPDQTVDQLAERAGTIGYEILTSLGSRYQR 340

Query: 368 FYT 370
            Y+
Sbjct: 341 RYS 343


>gi|283471286|emb|CAQ50497.1| alanine racemase [Staphylococcus aureus subsp. aureus ST398]
          Length = 382

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 154/371 (41%), Gaps = 27/371 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+   + L  N    AVVK NAYGLG  K+A  L   G   F V +++E ++
Sbjct: 13  VDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIE 72

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQV 128
           LR++   A+I VL  +            +   + S   L    K +           +++
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIKL 132

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           DTG  RLG+   +          +        + +H ACAD+    + + Q  RF+ +++
Sbjct: 133 DTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADE-PGDMTTEQYHRFKDMVN 191

Query: 188 HYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHPMQTVVTAEARI 242
                E     +S   L  +  F    RPGISLYG              ++  V   A +
Sbjct: 192 EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVHLKPSVQLIANV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +   AGE VSYG     T  + IA+  IGYADGY   + G                +
Sbjct: 252 VQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGS------------FVNV 299

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G+   ++G++ MD T+  + D   ++ GD + +          ++  A    T NY++L
Sbjct: 300 IGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVAAEKQHTINYEVL 357

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 358 CNLSRRLPRIY 368


>gi|15672826|ref|NP_267000.1| alanine racemase [Lactococcus lactis subsp. lactis Il1403]
 gi|281491333|ref|YP_003353313.1| alanine racemase [Lactococcus lactis subsp. lactis KF147]
 gi|20137230|sp|Q9CH94|ALR_LACLA RecName: Full=Alanine racemase
 gi|12723770|gb|AAK04942.1|AE006318_5 alanine racemase [Lactococcus lactis subsp. lactis Il1403]
 gi|281375074|gb|ADA64592.1| Alanine racemase [Lactococcus lactis subsp. lactis KF147]
          Length = 367

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 155/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +      +DL A++NN          NA     VK +AYG G  +++ A+ +  V
Sbjct: 1   MKTSPHRNTSAIVDLKAIRNNIEKFKKHIHPNAEIWPAVKADAYGHGSVEVSKAVSDL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR +     I VL GI P    I    N+     S+  L    +  +
Sbjct: 60  GGFCVSNLDEAIELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPSLEWLKLVVQEEA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   + VD+G  R+G+   E  +      +K       I +H A AD         
Sbjct: 120 ELSDLKIHIGVDSGMGRIGIRDVEEANQMIELADKYAINFEGIFTHFATADMADDTKFKD 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           Q  RF  +++        +   +++  L        + R GIS+YG       +     +
Sbjct: 180 QQARFNKIMAGLSRKPKFVHSTNTAAALWHKEQVQAIERLGISMYGLNPSGKTLELPFEI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + +  I+K  AGE V YG   + + ++ I    IGYADG+   + G       
Sbjct: 240 EPALSLVSELTHIKKIAAGETVGYGATYETSEETWIGTVPIGYADGWTRQMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  + G    I+G++ MD  M  +  S  +  G  + + G D    I   DVA 
Sbjct: 294 ------KVLVNGEFCEIVGRVCMDQMMIKLDKSYPL--GTKVTLIGRDKTNEITTTDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 WRGTINYEVLCLLSDRIKRIY 366


>gi|157160693|ref|YP_001458011.1| alanine racemase [Escherichia coli HS]
 gi|170020442|ref|YP_001725396.1| alanine racemase [Escherichia coli ATCC 8739]
 gi|188493753|ref|ZP_03001023.1| alanine racemase 2, catabolic [Escherichia coli 53638]
 gi|194437125|ref|ZP_03069224.1| alanine racemase [Escherichia coli 101-1]
 gi|253773812|ref|YP_003036643.1| alanine racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161272|ref|YP_003044380.1| alanine racemase [Escherichia coli B str. REL606]
 gi|300928267|ref|ZP_07143804.1| alanine racemase [Escherichia coli MS 187-1]
 gi|301648159|ref|ZP_07247912.1| alanine racemase [Escherichia coli MS 146-1]
 gi|307137803|ref|ZP_07497159.1| alanine racemase [Escherichia coli H736]
 gi|312971372|ref|ZP_07785547.1| alanine racemase [Escherichia coli 1827-70]
 gi|331641716|ref|ZP_08342851.1| alanine racemase [Escherichia coli H736]
 gi|157066373|gb|ABV05628.1| alanine racemase [Escherichia coli HS]
 gi|169755370|gb|ACA78069.1| alanine racemase [Escherichia coli ATCC 8739]
 gi|188488952|gb|EDU64055.1| alanine racemase 2, catabolic [Escherichia coli 53638]
 gi|194424108|gb|EDX40096.1| alanine racemase [Escherichia coli 101-1]
 gi|242376970|emb|CAQ31692.1| alanine racemase 2, PLP-binding [Escherichia coli BL21(DE3)]
 gi|253324856|gb|ACT29458.1| alanine racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253973173|gb|ACT38844.1| alanine racemase [Escherichia coli B str. REL606]
 gi|253977387|gb|ACT43057.1| alanine racemase [Escherichia coli BL21(DE3)]
 gi|300463736|gb|EFK27229.1| alanine racemase [Escherichia coli MS 187-1]
 gi|301073745|gb|EFK88551.1| alanine racemase [Escherichia coli MS 146-1]
 gi|310335969|gb|EFQ01169.1| alanine racemase [Escherichia coli 1827-70]
 gi|315615973|gb|EFU96599.1| alanine racemase [Escherichia coli 3431]
 gi|323962767|gb|EGB58345.1| alanine racemase [Escherichia coli H489]
 gi|323973413|gb|EGB68600.1| alanine racemase [Escherichia coli TA007]
 gi|331038514|gb|EGI10734.1| alanine racemase [Escherichia coli H736]
          Length = 356

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|296101876|ref|YP_003612022.1| alanine racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056335|gb|ADF61073.1| alanine racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 356

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 159/370 (42%), Gaps = 22/370 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M      +L  DL ALK+N   +   +  +R  +VVK NAYG G ++I  AL       F
Sbjct: 1   MSRPVLAQL--DLQALKDNLQIVRRAAPGSRVWSVVKANAYGHGIDRIWSALSA--TDGF 56

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            + ++EE + LR    +  I +L G     +  + D   +             +      
Sbjct: 57  ALLNLEEAILLRERGWKGPILLLEGFFHADDLPLLDKYRLTTSVHSNWQIKAIQDAKLHA 116

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+V++G NRLG   +            K      +++H A A+ P    +++   
Sbjct: 117 PLDIYLKVNSGMNRLGFQPERVHTVWQQLRALKNVGEMTLMAHFADAEKPDGIADAMVRI 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVV 236
                 +       SL++S+  L  P  H+   RPGI LYG +         +  ++ V+
Sbjct: 177 ---EQAAEGLDCPRSLSNSAATLWHPEAHYNWVRPGIVLYGASPSGQWQDIANSGLKPVM 233

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  + II ++   AG+ V YG + + T +  I + A GYADGYP                
Sbjct: 234 TLRSEIIGVQTLKAGDTVGYGSRYRATGEQRIGIVAGGYADGYPRIA-----------PS 282

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
           G   ++ G     +G ++MDM   D+T      +G  ++++G ++K+DDVA A+GT  Y+
Sbjct: 283 GTPVWVDGVRTGTVGTVSMDMLAVDLTPCPQAGIGSPVELWGNEVKIDDVAAAAGTVGYE 342

Query: 357 LLVRIGTRYA 366
           L+  +  R  
Sbjct: 343 LMCALAPRVP 352


>gi|288573304|ref|ZP_06391661.1| alanine racemase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569045|gb|EFC90602.1| alanine racemase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 371

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 154/379 (40%), Gaps = 26/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R+++ L  L  N+ S+        +  +V+K +AYG G  ++A  L + G Q F V 
Sbjct: 4   RPSRMEVSLDNLAFNYRSIKNHVGPEVQLMSVIKADAYGHGVMEVARRLSSEGCQRFAVA 63

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           + +E   LR       + V+          +   N+   ++ +      SK     G   
Sbjct: 64  TSDEAFALRDGGVGEALLVMGPTSYASAGELVRRNVSVALTDMDMARALSKAAESEGTPA 123

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VD+G  R+G   +E         +     +  + +H A AD+        Q  R+
Sbjct: 124 YVHLKVDSGMGRIGFLPEEVPAILDELISLPGVVVEGLFTHFATADERRLDYTESQYRRY 183

Query: 183 RTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             +++    KG+      + +S+G L  P  H    RPG+ LYG     +   P++   T
Sbjct: 184 LDVLAMLEDKGVRIPVRHVCNSAGTLNSPEKHLDACRPGVILYGMWPSGDCIRPIELKPT 243

Query: 238 AEAR--IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            E +  I +IR       V YG +     D  IAV  IGYADG     S           
Sbjct: 244 FEVKTSIAMIRNLPPRSGVGYGLRYMTRGDERIAVLPIGYADGLSRAFSMRI-------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS- 350
              +  +KG  VP +G I MD TM D+T    + VGD + I G      I  D++A A  
Sbjct: 296 ---QMLVKGTRVPQVGNICMDQTMIDVTGL-DVSVGDEVVIVGSQGDETITPDELAGARH 351

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T NY++ +    R  + Y
Sbjct: 352 NTINYEIPIMFSKRVPRVY 370


>gi|323953960|gb|EGB49759.1| alanine racemase [Escherichia coli H263]
          Length = 356

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPRARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|15901532|ref|NP_346136.1| alanine racemase [Streptococcus pneumoniae TIGR4]
 gi|111657514|ref|ZP_01408257.1| hypothetical protein SpneT_02001280 [Streptococcus pneumoniae
           TIGR4]
 gi|116515765|ref|YP_816964.1| alanine racemase [Streptococcus pneumoniae D39]
 gi|221232432|ref|YP_002511585.1| alanine racemase [Streptococcus pneumoniae ATCC 700669]
 gi|225855126|ref|YP_002736638.1| alanine racemase [Streptococcus pneumoniae JJA]
 gi|225857311|ref|YP_002738822.1| alanine racemase [Streptococcus pneumoniae P1031]
 gi|298229862|ref|ZP_06963543.1| alanine racemase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255738|ref|ZP_06979324.1| alanine racemase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503442|ref|YP_003725382.1| alanine racemase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254308|ref|ZP_07340416.1| alanine racemase [Streptococcus pneumoniae BS455]
 gi|61218406|sp|P0A2W8|ALR_STRPN RecName: Full=Alanine racemase
 gi|61218407|sp|P0A2W9|ALR_STRR6 RecName: Full=Alanine racemase
 gi|122278190|sp|Q04J74|ALR_STRP2 RecName: Full=Alanine racemase
 gi|254802389|sp|B8ZMG1|ALR_STRPJ RecName: Full=Alanine racemase
 gi|254802391|sp|C1CFR7|ALR_STRZJ RecName: Full=Alanine racemase
 gi|254802392|sp|C1CM34|ALR_STRZP RecName: Full=Alanine racemase
 gi|5759209|gb|AAD51027.1|AF171873_1 alanine racemase [Streptococcus pneumoniae]
 gi|14973192|gb|AAK75776.1| alanine racemase [Streptococcus pneumoniae TIGR4]
 gi|116076341|gb|ABJ54061.1| alanine racemase [Streptococcus pneumoniae D39]
 gi|220674893|emb|CAR69468.1| alanine racemase [Streptococcus pneumoniae ATCC 700669]
 gi|225723137|gb|ACO18990.1| alanine racemase [Streptococcus pneumoniae JJA]
 gi|225725718|gb|ACO21570.1| alanine racemase [Streptococcus pneumoniae P1031]
 gi|298239037|gb|ADI70168.1| alanine racemase [Streptococcus pneumoniae TCH8431/19A]
 gi|302598659|gb|EFL65697.1| alanine racemase [Streptococcus pneumoniae BS455]
          Length = 367

 Score =  261 bits (668), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|288927757|ref|ZP_06421604.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288330591|gb|EFC69175.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 825

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 150/373 (40%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+ +N +   A+   N +   ++K + YG G  +IA  L +       V   
Sbjct: 464 TTLEVNLNAMIDNLNYYRAMMHPNTKLVCMIKADGYGAGAVEIAKTLQDHRADYLAVAVA 523

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EG  LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 524 DEGATLRRNGISSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLEALIKAAEKEGITGFP 582

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG   + +         N+       + SH   AD D   + +  Q E 
Sbjct: 583 VHIKLDTGMHRLGFDPEKDVPRLIERLHNQNALIPKSVFSHFVGADADQFDNFSQRQFEC 642

Query: 182 FRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F         +    I   + +S+GI   P     + R G+ LYG   + N      +  
Sbjct: 643 FDKGSKMLQAAFEHHILRHIDNSAGIEHFPQRQLDMCRLGLGLYGINPRNNAIINNVS-- 700

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T    I+ + K  AGE V Y  +  +  DS+IA   IGYADG    L             
Sbjct: 701 TLRTTILQLHKVKAGETVGYSRRGTIEHDSVIAAIPIGYADGLNRRLGNR---------- 750

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   +       +G I MD+ M D+T       GD ++IFG ++ +  ++ A  T  Y+
Sbjct: 751 NGHCLVNNQRAEYVGNICMDVAMIDVTGI-DCNEGDSVEIFGDNLPVTVLSDALQTIPYE 809

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 810 VLTGISNRVNRVY 822


>gi|149006639|ref|ZP_01830338.1| alanine racemase [Streptococcus pneumoniae SP18-BS74]
 gi|225861522|ref|YP_002743031.1| alanine racemase [Streptococcus pneumoniae Taiwan19F-14]
 gi|307127910|ref|YP_003879941.1| alanine racemase [Streptococcus pneumoniae 670-6B]
 gi|254802393|sp|C1CSV9|ALR_STRZT RecName: Full=Alanine racemase
 gi|147761937|gb|EDK68900.1| alanine racemase [Streptococcus pneumoniae SP18-BS74]
 gi|225726792|gb|ACO22643.1| alanine racemase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306484972|gb|ADM91841.1| alanine racemase [Streptococcus pneumoniae 670-6B]
 gi|327389883|gb|EGE88228.1| alanine racemase [Streptococcus pneumoniae GA04375]
 gi|332072868|gb|EGI83349.1| alanine racemase [Streptococcus pneumoniae GA17545]
 gi|332200256|gb|EGJ14329.1| alanine racemase [Streptococcus pneumoniae GA47368]
          Length = 367

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKVLIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|255007708|ref|ZP_05279834.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides fragilis 3_1_12]
          Length = 831

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 473 LEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 532

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + +   L    K        + P  
Sbjct: 533 GSDLRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH 591

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG   ++         N+       + SH   +D          Q+ER+  
Sbjct: 592 VKLDTGMHRLGFEEKDIPQLIRRLKNQNAVIPRSVFSHFVGSDSPQFDAFTRQQIERYEH 651

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +         I   + +++GI   P   F + R GI LYG +   N      +  T +
Sbjct: 652 MSTELQEAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSVINNVS--TLK 709

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L              G 
Sbjct: 710 TTILQIRDVAEEDTVGYSRKGHLVRPSRIAAIPIGYADGLNRHLGCGH----------GY 759

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD      GD   IFG ++ +  ++    T  Y++L 
Sbjct: 760 CLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAVIFGDELPITVLSDTLDTIPYEVLT 818

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 819 GISTRVKRVY 828


>gi|115358240|ref|YP_775378.1| alanine racemase [Burkholderia ambifaria AMMD]
 gi|115283528|gb|ABI89044.1| alanine racemase [Burkholderia ambifaria AMMD]
          Length = 373

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   A+++N   +   +  +R  AV+K NAYG G E+I P L         +  
Sbjct: 3   RPIVAHVRPDAVRHNLDFIRRTAAQSRVWAVIKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELADRHRLTVAVHCDEQLDLLIAAKPRQPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        QLE+F  
Sbjct: 121 QLKMNSGMNRLGYRPYAFRAAWERAAAAPSIGKITLMMHFANADEGE---VDWQLEQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERSASNSAAVLWHPRAHRDWVRPGTILYGASPTGAAGHIADTPLMPAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPDETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGMMTRVVGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LARRVP 351


>gi|312863275|ref|ZP_07723513.1| alanine racemase [Streptococcus vestibularis F0396]
 gi|322516061|ref|ZP_08068998.1| alanine racemase [Streptococcus vestibularis ATCC 49124]
 gi|311100811|gb|EFQ59016.1| alanine racemase [Streptococcus vestibularis F0396]
 gi|322125476|gb|EFX96822.1| alanine racemase [Streptococcus vestibularis ATCC 49124]
          Length = 367

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+  N   + +      +T AVVK NAYG G  ++A  +    V
Sbjct: 1   MISSLHRPTLAKVDLSAISENIEQVVSHIPKQVQTFAVVKANAYGHGAVEVAKHVSKQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           + F V++++E ++LR    +  I +L  + P +  +    N+   ++S+  L    K   
Sbjct: 60  EGFCVSNLDEALELRQAGLEQPILILGVVLPDEVPLAIQENITLTVASLEWLEMAKKQGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+G+   E  D            +  I +H A AD+        
Sbjct: 120 DLTGLTCHIKIDSGMGRIGVRNLEDADNLIAGLKDLGADVEGIFTHFATADEADDSKFKR 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+++       +   +S+  +      F   R G+ +YG       ++  + +
Sbjct: 180 QLAFFTDLVNNLVDRPRLVHASNSATSIWHAETVFNAVRLGVVIYGLNPSGSVLDLPYNI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E  ++ ++   AG+ V YG     T D +I    IGYADG+   L G       
Sbjct: 240 RPALSLETALVHVKTLPAGKDVGYGATYTTTVDEVIGTIPIGYADGWTRDLQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G +    I   +VA 
Sbjct: 294 ------HVIVDGQLCPIVGRVSMDQITVRLPKVYPL--GTPVTLMGENGGASITATEVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRVPRSY 366


>gi|303229989|ref|ZP_07316763.1| alanine racemase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515355|gb|EFL57323.1| alanine racemase [Veillonella atypica ACS-134-V-Col7a]
          Length = 370

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 166/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L ID + ++ N   +  +L   + + AV+K N YG G   +       G +   V 
Sbjct: 2   RPTYLTIDTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE V LR       I++L    P   +++ DTN IP +     L   +K+  +  +  
Sbjct: 62  IPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLEALNKVADNHDMII 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+ VDTG +R+G+  ++A++F     +     +    SH++ AD         Q ++F
Sbjct: 122 RVAVAVDTGMHRIGIKPEDAVEFIKRVESYPNLAVDGFFSHMSNADAADQSHAHGQAQKF 181

Query: 183 RTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
            T++   +           LA+S+G+L   +  F   RPGI  YG    ++      ++ 
Sbjct: 182 HTMVDEIRAFRPDADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++  + ++ ++   AGE + YG          IA   +GYADGYP +LS          
Sbjct: 242 VLSLHSEVVHVQHLEAGEGIGYGSTYITPEPMTIATIPVGYADGYPRSLSNR-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I+G   P++G+I MD  M  + D+++++ GD + + G      I   ++A  +
Sbjct: 294 ---GTVLIQGTRCPVVGRICMDQFMVAVPDTITVKPGDKVVLLGSQGHESISALEIAALA 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++      R  + Y
Sbjct: 351 STIPYEIFCGFSDRVPRQY 369


>gi|326803963|ref|YP_004321781.1| alanine racemase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650608|gb|AEA00791.1| alanine racemase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 385

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 98/391 (25%), Positives = 155/391 (39%), Gaps = 39/391 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   R+ + +  + +N+     A S  A+T AV+K +AYG G   IA AL  AG + F V
Sbjct: 6   HRPTRVVVSIPNIVDNYLLFKHAFSPKAKTYAVIKADAYGHGSIPIAKALTEAGAEGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--- 119
              +E + LR    QA I +L         +    ++   ISS+  L             
Sbjct: 66  AVTDEALALREAGIQAPILILGITEVEDAWLHAQHDISLTISSLAWLKAAYAQRPTDQEF 125

Query: 120 VSHPYALQVDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HV 174
                 L+VD+G  R+GL      QE +D+  +                A +D       
Sbjct: 126 PPLKLHLKVDSGMGRIGLRDSQAGQEIIDYISDHQEAFELDGIFTHYATADSDQVKDQDY 185

Query: 175 NSVQLERFRTLISH------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---- 224
            + Q +RF   I         K      ++++  L  P     + R GI LYG +     
Sbjct: 186 VAKQSQRFEDFIQALDFSHLNKKPLIHRSNTALALWYPEKTMDIVRLGIGLYGESPAGPD 245

Query: 225 -KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
             + +   ++   T E+ ++ ++K  AGE +SYG       D  I    IGYADG P + 
Sbjct: 246 FALPEDMALKPAFTLESELVYVKKLQAGESISYGATYTTESDQWIGTLPIGYADGLPRSS 305

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           SG             +  I GY  PI+G++ MD  M  +   L +     + + G D   
Sbjct: 306 SGF------------EVLIAGYKCPIVGRVCMDQCMVALPKELPLHE--KVTLIGSDDQG 351

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             I   D+AL + T  Y++   I  R  + Y
Sbjct: 352 NHISAWDLALYNHTIAYEITCGISERVPRTY 382


>gi|160947411|ref|ZP_02094578.1| hypothetical protein PEPMIC_01345 [Parvimonas micra ATCC 33270]
 gi|158446545|gb|EDP23540.1| hypothetical protein PEPMIC_01345 [Parvimonas micra ATCC 33270]
          Length = 393

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 158/373 (42%), Gaps = 25/373 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++L  LKNN+  +      A+   V+K NAYGLG   +A  L   G   F V +  E ++
Sbjct: 10  VNLDKLKNNFLKIKEKCNGAKVGIVLKANAYGLGACTVAEFLQKQGADYFCVANFSEAME 69

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQVD 129
           LR    +  I +L  +     + +   N+   + ++  +         C       +++D
Sbjct: 70  LRKKKIKLPILILGYVPNALFEKLIKNNVDLTVYNIEMIRELNEISAKCRKKCKIHIKID 129

Query: 130 TGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-- 186
           TG NRLG  + +   D+    ++ K   +  + SHL  +D        +Q+ERF  +   
Sbjct: 130 TGMNRLGFLIDDKLKDYLKEIYSMKHIIVKGMFSHLCVSDIDDFSFTKLQVERFEKVKHI 189

Query: 187 --SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV----TAEA 240
                  I     ++ G  L  +Y++ + R GI +YG           +  +    +  +
Sbjct: 190 LEEENLKIPMLHIANDGGALLHDYYYDMVRVGIGIYGHYPSEYVKDNSKMKMDTVVSFVS 249

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  I+    G+ V YG      R   +A  +IGYADGYP  LS             G  
Sbjct: 250 TVSNIKYIHKGDTVGYGRTFCADRTIKVATISIGYADGYPYELSN-----------KGYV 298

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYD 356
            I      ILGK+ MD TM DI+D   +++GD   ++G      + + ++A  + T  YD
Sbjct: 299 MINNKKAKILGKVCMDQTMIDISDIDDVKIGDTALLYGEYKDMKLDIFEIAKIANTNVYD 358

Query: 357 LLVRIGTRYAKFY 369
           L+ RI  R  + Y
Sbjct: 359 LICRINMRIPRVY 371


>gi|119963782|ref|YP_948596.1| alanine racemase [Arthrobacter aurescens TC1]
 gi|119950641|gb|ABM09552.1| alanine racemase [Arthrobacter aurescens TC1]
          Length = 417

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/380 (24%), Positives = 151/380 (39%), Gaps = 31/380 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+++N      ++  A   AVVK +AYG G  ++A A  +AG     V  + E 
Sbjct: 27  AVIDLDAVRHNVRQFVGIASPAAVMAVVKADAYGHGAVQVARAALDAGAAWLGVAHISEA 86

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR    +A +           +      +   IS        +            L+V
Sbjct: 87  LALRAAGVEAPLLAWLHTRESNFQAAVAAGIDVGISGWELEAVVAAAREQERPARVHLKV 146

Query: 129 DTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G ++ +            ++ L ++  + SHLA AD+P       QL  FR  
Sbjct: 147 DTGLGRNGCTIADWDQLLGQAMEYQDQGLLRVVGVFSHLAVADEPERPETDEQLAVFREA 206

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVT 237
           ++  +          +A++   L  P+ HF L R G+ +YG +           +   +T
Sbjct: 207 LAMAEDAGVDTEVRHIANTPAALSRPDSHFDLVRVGLGIYGLSPFDGATSAELGLHPAMT 266

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               +   +K   G+ VSYG   +   +S + +  +GYADG P             +  G
Sbjct: 267 VRTLLSNCKKVPEGQGVSYGLNYRTIEESTLGLVPLGYADGVPR------------IATG 314

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDS-LSIEV---GDYIQIFGP----DIKLDDVALA 349
           G   + G   P++G+I MD  + D+            G    +FG         DD A A
Sbjct: 315 GPVRVNGINYPVVGRIAMDQMVIDLGPLSPEAAAGLKGAEAVMFGNGADGGPTADDWAAA 374

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           +GT NY+++ RI  R  + Y
Sbjct: 375 AGTNNYEIVTRISPRVPRSY 394


>gi|313889680|ref|ZP_07823323.1| alanine racemase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121977|gb|EFR45073.1| alanine racemase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 368

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/382 (22%), Positives = 162/382 (42%), Gaps = 28/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +      +DL A++NN  ++        +T AVVK +AYG G  +++ A+    V
Sbjct: 1   MISSIHRPTVATVDLEAIRNNIKAVQGHIPKGTKTYAVVKADAYGHGAVEVSKAIDKE-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I VL  +      +  +  +   ++S   L      + 
Sbjct: 60  DAYCVSNLDEALELRQAGISKEILVLGVVLADALLLAIENQITVTVASQEWLDDAQAFLG 119

Query: 118 CGVS-HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             ++     ++VD+G  R+G+      +       +    +  I +H A AD+  +    
Sbjct: 120 EDLTNLHVHVKVDSGMGRIGVRSLAEANQLIAGLRQAKVAVDGIFTHFATADEADTTKFQ 179

Query: 177 VQLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHP 231
            QL  F  L+S           ++S+  L   +  F   R GI++YG       +   +P
Sbjct: 180 SQLNFFTDLVSRLTDKPDLVHASNSATSLWHSDTIFNAVRLGIAIYGLNPSGSDLKLPYP 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++  +R++ +++  AG+ V YG     T D  I    IGYADG+   L G      
Sbjct: 240 LKPSLSLRSRLVHVKEIQAGDTVGYGATYTATEDECIGTIPIGYADGWTRDLQGF----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  I G    I+G+++MD     +  +    +G  + + G     +I   DVA
Sbjct: 295 -------EVLIDGQFCQIIGRVSMDQMTVRLPKTYE--IGKLVTLIGTSGDQEITATDVA 345

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 346 EKKGTINYEVLCLLSDRIPRKY 367


>gi|167758273|ref|ZP_02430400.1| hypothetical protein CLOSCI_00611 [Clostridium scindens ATCC 35704]
 gi|167664170|gb|EDS08300.1| hypothetical protein CLOSCI_00611 [Clostridium scindens ATCC 35704]
          Length = 388

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 89/385 (23%), Positives = 161/385 (41%), Gaps = 27/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQ 58
           M++   +  ++DL A++ N   M   +    +  +V+K + YG G  +IA  L     + 
Sbjct: 1   MNNYTRICARVDLDAIEYNMEMMKKNIKEGVQMISVIKTDGYGHGALQIARMLEGKEYLW 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
            + V + +E V LR    +  I VL  I P Q K + +  +   + +            S
Sbjct: 61  GYAVATPDEAVVLRKGGIKKPILVLGCIFPDQRKAMIENEIRMTVYTEEMAKEVSELAGS 120

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            G      +++DTG +RLG     E++D   +        +  + +H A AD+       
Sbjct: 121 MGKQAYIHIKLDTGMSRLGFLIEDESVDKIESISRMPNLIMEGMYTHFAKADETDKTFTH 180

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q++ +  +                ++S+GI+     +  L R GIS YG         +
Sbjct: 181 SQMDGYLWMKKALDERRVTFKFYHCSNSAGIIDVKEANLDLVRAGISTYGLYPSSEVKKE 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           + P++  +   + +  ++    G  VSYGG     R + IA   +GY DGYP +LS    
Sbjct: 241 NVPLKPAMELISHVAHVKWVKEGTPVSYGGTFITKRPTKIATIPVGYGDGYPRSLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   I G   PILG++ MD  M D T+   ++  D + + G      + ++
Sbjct: 298 --------KGYVLIHGKKAPILGRVCMDQFMVDATEIDDVKYADKVTLVGCDGNEKLPVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++  SG  NY+ +  +G R  + +
Sbjct: 350 TLSDLSGRFNYEFVCDLGKRIPREF 374


>gi|314934146|ref|ZP_07841507.1| alanine racemase [Staphylococcus caprae C87]
 gi|313653051|gb|EFS16812.1| alanine racemase [Staphylococcus caprae C87]
          Length = 382

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 94/382 (24%), Positives = 161/382 (42%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R   L ++L A+ NN+   N L  N    +V+K N+YGLG  K+A  L   G   
Sbjct: 2   SEKFYRSTYLNVNLDAILNNYQIFNQLHHNKTVISVIKANSYGLGSVKVAHHLMEHGASF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMS 117
           F V +++E ++LR++   A+I VL  I            +   + S   L     +    
Sbjct: 62  FAVATLDEAIELRMHGIDAKILVLGVIPTKDISKAIQHRVALTVPSKAWLKEAIRNIPEK 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                    ++D+G  RLG+  ++E  D       K       + +H A AD+P   +N 
Sbjct: 122 NEKKLWLHAKIDSGMGRLGMKDVEEYKDVVDIINKKDDLVFEGVFTHFASADEPGDSMN- 180

Query: 177 VQLERFRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
            Q E F+ +++  +        +S+  LL         R GISLYG         N    
Sbjct: 181 EQYEFFKDIVNQVEKPNYIHSQNSAASLLMDGQFCNAIRLGISLYGYYPSQYVRDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++        I+ ++    GE VSYG      ++  IA+  +GYADGY   +        
Sbjct: 241 LRPSAQLVTEIVQVKSLKVGETVSYGRTFTADKEMKIAILPVGYADGYLRAMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVA 347
                G    + G+   ++G++ MD T+  + D   +++GD + +    I     ++ +A
Sbjct: 294 -----GAYVNVNGHQCEVVGRVCMDQTIVSVPD--DVKMGDKVILMDNHIDSPQSVESLA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +  R  + Y
Sbjct: 347 EKQHTINYEVLCNLSKRLPRIY 368


>gi|146312008|ref|YP_001177082.1| alanine racemase [Enterobacter sp. 638]
 gi|145318884|gb|ABP61031.1| alanine racemase [Enterobacter sp. 638]
          Length = 356

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +  ++DL ALKNN   +   +  +R  +VVK N YG G E I  AL       F + 
Sbjct: 2   SRPILAQLDLQALKNNLQIVRRAAPGSRVWSVVKANGYGHGIESIWSALSA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     E  + D   +             +         
Sbjct: 60  NLEEAILLRERGWKGPILLLEGFFHADELPLLDKYRLTTSVHSNWQIKALQNAKLHSPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   +            K      +++H A A+ P    N++      
Sbjct: 120 IYLKMNSGMNRLGFQPERVNTVWQQLRAIKNVGEMTLMAHFADAEKPDGITNAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  H+Q  RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLDCARSLSNSAATLWHPEAHYQWVRPGIVLYGASPSGQWQDIANSGLKPVMTLR 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II I+   AG+ V YG + + T +  I + A GYADGYP                G  
Sbjct: 237 SEIIGIQTLKAGDTVGYGSRYRSTGEQRIGIVAGGYADGYPRLA-----------PSGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            +I G     +G I+MDM   D+T      +G  ++++G ++K+DDVA A+GT  Y+LL 
Sbjct: 286 VWIDGVRTGTVGTISMDMMAIDLTPCPQAGIGSPVELWGNEVKVDDVASAAGTVGYELLT 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|262195116|ref|YP_003266325.1| alanine racemase [Haliangium ochraceum DSM 14365]
 gi|262078463|gb|ACY14432.1| alanine racemase [Haliangium ochraceum DSM 14365]
          Length = 397

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 110/384 (28%), Positives = 177/384 (46%), Gaps = 28/384 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDF 60
           H+    R++IDL A+  N   +      A   AVVK +AYG G   +A +L   G  + F
Sbjct: 3   HTVRPTRVEIDLDAIHANARVLRE-VSQAALYAVVKADAYGHGARVVARSLAEVGAAEGF 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+ VEEG +LR     A I V+     G E  I   +L+  +SS   +   +   +   
Sbjct: 62  AVSLVEEGCELRDAGIDAPILVMGPALRGGEDEIVGRDLMAALSSFDDIARLAAAAARRG 121

Query: 121 SH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD----DPSSHVN 175
           +  P  L+VDTG  RLG++     +   +       ++  ++SHLACAD         ++
Sbjct: 122 ARLPVHLKVDTGMGRLGIAPARVGEALDHIRAHGSLEVVGLMSHLACADGDDPADPGCMS 181

Query: 176 SVQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q+ RF    +       + +   LA+SS  LL P     L R G++LYG + +  +  
Sbjct: 182 YEQIARFDEAAAVLRARGLRHVRQHLANSSATLLFPEARRDLVRCGLALYGNSQQPERVP 241

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  V     I  +R+  AG  VSYG   +   D+ +AV  IGYADG P  L+G+    
Sbjct: 242 RLRQGVRLVTEIAQVREVAAGSSVSYGALWRAPHDARVAVIPIGYADGAPRRLTGV---- 297

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD----IKLDD 345
                  G+  I G   P++G ++MDMTM D++    S+  GD + + G      I + +
Sbjct: 298 -------GEVLIAGRRCPMVGAVSMDMTMIDVSALGGSVGEGDEVVLLGEQGDDAISVHE 350

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A  +G   Y++   +  R  + Y
Sbjct: 351 MASWTGLCEYEVTCGLSKRVPRVY 374


>gi|149011437|ref|ZP_01832684.1| alanine racemase [Streptococcus pneumoniae SP19-BS75]
 gi|225859452|ref|YP_002740962.1| alanine racemase [Streptococcus pneumoniae 70585]
 gi|303258631|ref|ZP_07344611.1| alanine racemase [Streptococcus pneumoniae SP-BS293]
 gi|303261794|ref|ZP_07347740.1| alanine racemase [Streptococcus pneumoniae SP14-BS292]
 gi|303263658|ref|ZP_07349580.1| alanine racemase [Streptococcus pneumoniae BS397]
 gi|303266834|ref|ZP_07352713.1| alanine racemase [Streptococcus pneumoniae BS457]
 gi|303269891|ref|ZP_07355633.1| alanine racemase [Streptococcus pneumoniae BS458]
 gi|254802388|sp|C1C8T6|ALR_STRP7 RecName: Full=Alanine racemase
 gi|147764427|gb|EDK71358.1| alanine racemase [Streptococcus pneumoniae SP19-BS75]
 gi|225720818|gb|ACO16672.1| alanine racemase [Streptococcus pneumoniae 70585]
 gi|301802398|emb|CBW35152.1| alanine racemase [Streptococcus pneumoniae INV200]
 gi|302636877|gb|EFL67366.1| alanine racemase [Streptococcus pneumoniae SP14-BS292]
 gi|302640132|gb|EFL70587.1| alanine racemase [Streptococcus pneumoniae SP-BS293]
 gi|302640569|gb|EFL70974.1| alanine racemase [Streptococcus pneumoniae BS458]
 gi|302643602|gb|EFL73870.1| alanine racemase [Streptococcus pneumoniae BS457]
 gi|302646696|gb|EFL76921.1| alanine racemase [Streptococcus pneumoniae BS397]
          Length = 367

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   K    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREVSEVEQAQDLLQKHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|307705415|ref|ZP_07642272.1| alanine racemase [Streptococcus mitis SK597]
 gi|307621014|gb|EFO00094.1| alanine racemase [Streptococcus mitis SK597]
          Length = 367

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 157/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPEGTLKFAVVKANAYGHGAVAVATAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSELEVVSLAKEYDITLTVAGLEWIQALLDKEADLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +   ++  I +H A AD+ S    +VQLERF
Sbjct: 125 TVHLKIDSGMGRIGFREAREAEQAQDLLQQHGARVEGIFTHFATADEESDDYFNVQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +++++  K +      ++S+  L      F   R G ++YG       ++  + +   + 
Sbjct: 185 KSILASMKEVPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGDALDLPYDLTPALF 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVSAGAYMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + +     G +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGGKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|161503072|ref|YP_001570184.1| alanine racemase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160864419|gb|ABX21042.1| hypothetical protein SARI_01137 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 356

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 160/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL  +G   F + +
Sbjct: 3   RPIQASLDLQVMKQNLSIVRRAAPEARVWSVVKANAYGHGIERVWNAL--SGTDGFAMLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G    Q+   +DT  +             +          
Sbjct: 61  LEEAITLRERGWKGPILMLEGFFHAQDLETYDTYRLTTCIHSNWQLKALQNARLNAPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V++G NRLG   + A          +      I+SH A AD P     +++     T
Sbjct: 121 YVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTIMSHFAQADHPEGIGEAMRRIALAT 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
                     SLA+S+  L  P  H+   RPGI LYG +         +  ++ V+T  +
Sbjct: 181 EGIQC---PYSLANSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIANTGLKPVMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AGE V YGG     ++  I + A GYADGYP                G   
Sbjct: 238 EIIGVQTLRAGEKVGYGGCYSAHQEQRIGIVAAGYADGYPRHA-----------PTGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL  
Sbjct: 287 LVDGIRTGTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVAAAAGTLGYELLCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|238757005|ref|ZP_04618193.1| Alanine racemase, catabolic [Yersinia aldovae ATCC 35236]
 gi|238704835|gb|EEP97364.1| Alanine racemase, catabolic [Yersinia aldovae ATCC 35236]
          Length = 358

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/366 (25%), Positives = 155/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  K++L+AL +N + +    G ++  +VVK NAYG G  ++ P L       F +  
Sbjct: 3   RPIAAKLNLSALNHNLNIVRQHVGTSKIWSVVKANAYGHGLARVWPGLAA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR    Q  I +L G     +  + D   +             +          
Sbjct: 61  LNEAVLLREQGWQGPILLLEGFFQPPDLALVDHYRLTTTVHSDWQLEAIRAARLDAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG   ++A      + +        ++SH A AD+        Q  R   
Sbjct: 121 YLKLNSGMNRLGFPSEQAEAVWQWANSLSNVAEVTLMSHFANADNHIGA--GEQFARI-Q 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
            +S +       A+S+ IL  P  H+   RPGI LYG +   +     +  ++ V++  +
Sbjct: 178 HVSEHISAARCFANSAAILRHPETHYDWVRPGIILYGASPSGDIADIAALGLRPVMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++    G  V YG     +    I V A GYADGYP    G           G   
Sbjct: 238 EIIALQTLSVGHSVGYGSHYCASEPHRIGVVACGYADGYPRLAPG-----------GTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G ++MDM   D+T      VG  ++++G  + +D+VA A+GT  Y+L+  
Sbjct: 287 RVDGVLTHTVGAVSMDMLTVDLTPCPQAGVGSKVEVWGEHLPIDNVAAAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAGRVP 352


>gi|332759341|gb|EGJ89649.1| alanine racemase [Shigella flexneri 2747-71]
 gi|332767413|gb|EGJ97607.1| alanine racemase [Shigella flexneri 2930-71]
          Length = 356

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQSDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTACDEQRIGIVAAGYADGYPRHA-----------PTGAP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|53803938|ref|YP_114173.1| alanine racemase [Methylococcus capsulatus str. Bath]
 gi|81823645|sp|Q607M5|ALR_METCA RecName: Full=Alanine racemase
 gi|53757699|gb|AAU91990.1| alanine racemase [Methylococcus capsulatus str. Bath]
          Length = 359

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 19/366 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R  +D+ A  +N+  + A + +++  AV+K NAYG G  +   A        F V  VE
Sbjct: 5   ARAVLDMAAFAHNFAWIRAAAPDSKIMAVIKANAYGHGLIR--AARALPAADAFAVARVE 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG+ LR      RI VL G    +   +   + +  +          + +   V     L
Sbjct: 63  EGIVLRQAGIAQRIAVLQGYGDEEGMRLSARHGLEPVIHSGFQLDLLERLDTSVPMGVWL 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + D+G +RLGL+ +E            ++ Q   +++HLA AD        +QL  F  +
Sbjct: 123 KADSGMHRLGLADEEFARARLRLARMPQVRQPVPVMTHLANADATDDPTTEIQLRCFGRM 182

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEARI 242
                  E S+ +S+G++          RPGI LYG +    +S P      V+T ++R+
Sbjct: 183 AGGRG--EFSIGNSAGLMAWAAARSAWVRPGILLYGVSPFPGRSGPEEGLMPVMTLQSRL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +++   G+ V YGG     R + + +AAIGY DGYP                G    +
Sbjct: 241 IAVKQLKTGDAVGYGGDFICRRPTRMGIAAIGYGDGYPRRA-----------ATGTPVLV 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           +G  VP++G+++MDM   D+TD  S E+GD + ++G  + ++++AL + T  Y LL  + 
Sbjct: 290 RGRRVPLIGRVSMDMISVDLTDCPSAEIGDTVTLWGQGLPVEEIALHADTIPYVLLCNVT 349

Query: 363 TRYAKF 368
            R    
Sbjct: 350 QRVNMV 355


>gi|197103527|ref|YP_002128904.1| alanine racemase [Phenylobacterium zucineum HLK1]
 gi|196476947|gb|ACG76475.1| alanine racemase [Phenylobacterium zucineum HLK1]
          Length = 382

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 188/365 (51%), Gaps = 19/365 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL+A++ N+ ++   +  AR AAVVK +AYGLG   ++ AL   G +DFFV  + E ++
Sbjct: 16  IDLSAVRENFRALARHAAPARLAAVVKADAYGLGAGPVSEALAAEGCRDFFVAHLSEALE 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY-ALQV 128
           L+   P  AR++VL G+  G+E       ++PV++S+ Q   +S+L   G + P   LQ+
Sbjct: 76  LKPVLPEDARLYVLNGLAAGREPACAAAGVLPVLNSLDQAERWSRLAPDGGAAPPAVLQI 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLGL   E      ++      ++ L++SHLACAD+P    N+ Q E F  L + 
Sbjct: 136 DSGMSRLGLPEAEVRRLAGDADLLGRLRIDLLMSHLACADEPDHPANAAQAEAFDRLAAA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
                 SLA+S G LLGP +  QL R G+ L+GG     +    + VV   A ++ +R  
Sbjct: 196 LPDWPRSLANSHGALLGPRFRHQLVRSGVFLFGGVRS--QVLSPRPVVRLTAPVVQVRDV 253

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG  V YG        + IA  A+GYADG+   L             G      G  +P
Sbjct: 254 PAGAGVGYGFAHVTRAPARIATVALGYADGWSWNL-----------AEGWPALFDGQTLP 302

Query: 309 ILGKITMDMTMFDITDSLSI----EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           + G+++MD    D+T   +     + GD ++  G    + D A A+GT  Y++L R+G R
Sbjct: 303 VAGRVSMDSITLDVTAFEAAGGRLQPGDEVEFLGAGRDIVDAAEAAGTIPYEILTRMGRR 362

Query: 365 YAKFY 369
             + Y
Sbjct: 363 LQRRY 367


>gi|319654677|ref|ZP_08008756.1| alanine racemase [Bacillus sp. 2_A_57_CT2]
 gi|317393593|gb|EFV74352.1| alanine racemase [Bacillus sp. 2_A_57_CT2]
          Length = 423

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 150/375 (40%), Gaps = 26/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +I+L  +  N  SM   +       AVVK N YG G   +A A   AG     V ++
Sbjct: 49  TWAEINLDHISYNVESMKKHAEEGTNVIAVVKANGYGHGDAAVAEAALEAGASSLAVATL 108

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR     A I V+    P         N+   +     L+   + +  G      
Sbjct: 109 DEAMALRNKKIAAPILVMGASRPEHAGEASAKNIALTVFQKEWLSQAYEYVEDGEVLNIH 168

Query: 126 LQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L+ DTG  RLG+    E           K   L  + +H A AD   +     QL RF  
Sbjct: 169 LKFDTGMGRLGIRSRDELAGIESVIKKDKRFMLEGVFTHFATADSLENAYFEKQLSRFEE 228

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTA 238
           + S  + +   +   +S+  L  P  HF   R GIS+YG    +        P++   + 
Sbjct: 229 MTSWLEILPKYIHTSNSAAGLRFPKAHFNAVRMGISMYGLAPSMEIKSDLPFPLKEAFSL 288

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
              I+ ++K   GE VSYG   +   D  IA   IGYADG+   L G             
Sbjct: 289 HTSIVHVKKLHKGEKVSYGATYEAQEDEWIATLPIGYADGWIRKLQGQ------------ 336

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
           +   +G  VPI+G++ MD  M  +   + +  G  + + G      I +D++A    T N
Sbjct: 337 EVLAEGLRVPIVGRVCMDQCMIKLPHEMPV--GTKVTLIGEQGEEKIPVDEIAEKLETIN 394

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   + +R  + Y
Sbjct: 395 YEVTCMVSSRVPRIY 409


>gi|260593152|ref|ZP_05858610.1| Mur ligase domain protein/alanine racemase [Prevotella veroralis
           F0319]
 gi|260534860|gb|EEX17477.1| Mur ligase domain protein/alanine racemase [Prevotella veroralis
           F0319]
          Length = 826

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + +    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFMKPETKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR     + I ++        K +FD +L P + S   L     +         P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMSS-FKTLFDYDLEPEVYSFRLLDALVKAAQKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   Q +  +      ++       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPQKDMDELIDRLKHQNAIIPRSVFSHFVGSDADSFDEFSAKQFALFD 645

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +SSGI   P     + R G+ LYG   + NK     +  T 
Sbjct: 646 EGSKKLQAAFKHKIIRHIDNSSGIEHFPARQLDMCRLGLGLYGINPRTNKIINNVS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  +  DS+IA   IGYADG    L               
Sbjct: 704 KTTILQLRHVPAGDTVGYSRKGSIDHDSVIAAIPIGYADGLNRHLGNRHC---------- 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDVLDTIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 813 TTISNRVKRVY 823


>gi|319946373|ref|ZP_08020611.1| alanine racemase [Streptococcus australis ATCC 700641]
 gi|319747526|gb|EFV99781.1| alanine racemase [Streptococcus australis ATCC 700641]
          Length = 375

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 151/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   R  +D+ A+  N   + A       T AVVK NAYG G   +   L    V  F V
Sbjct: 6   HRPTRAYVDVEAIAYNVQQIQAHIPKETLTFAVVKANAYGHGVVPVVERLLPL-VDAFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E +++R    +  I +L         I     +   ++S+  L       +     
Sbjct: 65  SNLDEALEVRQVAGEKPILILGVAPVEHVAIAIKEGIRYTVASLEWLKALLAKKTDLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VD+G  R+G    E L            ++  I +H A AD+        QL+RF
Sbjct: 125 KVHIKVDSGMGRIGFRSAEDLQEAMILLRDHGAEVEGIFTHFATADEKDDRHFQNQLQRF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVT 237
           + L+         +   +S+  L   +  F   R G  +YG      ++   + ++  ++
Sbjct: 185 KCLLELLPFTPKIVHASNSATTLWHADTIFNAVRLGDVMYGLNPSGRELELPYDIRPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E  ++ ++    G+ V YG   + + +  I    IGYADG+   + G            
Sbjct: 245 LETELVHVKPLEVGQTVGYGATYQTSDEEWIGTIPIGYADGWTRDMQGF----------- 293

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G   PI+G+++MD     +  +    +G  + + G D    I + DVA   GT 
Sbjct: 294 -HVLVDGQFCPIVGRVSMDQITIRLPKAYP--IGTKVVLIGVDGDLAITITDVADYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCVLSDRVPRVY 366


>gi|163746601|ref|ZP_02153959.1| alanine racemase [Oceanibulbus indolifex HEL-45]
 gi|161380486|gb|EDQ04897.1| alanine racemase [Oceanibulbus indolifex HEL-45]
          Length = 347

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 129/364 (35%), Positives = 186/364 (51%), Gaps = 23/364 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A+ NNW +++ L+  A T AVVK ++YGLG E++A AL  AG + FFV   E
Sbjct: 4   ATLTIDLQAIANNWRALDRLT-KAETGAVVKADSYGLGAERVANALAQAGARQFFVALAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG  LR     +  I V  G   G  + I D  L P+I+S  Q     + +     HP+ 
Sbjct: 63  EGAALRQALGDRPVINVFSGHMAGDAEAIRDAALTPMINSTEQ---LLRQLETLPGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       + ++ L   +LI+SHLAC+D P   +N+ QL  F  +
Sbjct: 120 VQLDSGMNRLGMEPAEWAALRDIAQSQPL---TLIMSHLACSDAPDHEMNAAQLRSFHDM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SL+++ GILLG +YHF +TRPGI LYGG    +     Q VVT +  +I  
Sbjct: 177 TQG-IDVARSLSATGGILLGSDYHFDVTRPGIGLYGGRPFDDA----QPVVTLDVPVIQT 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG          +A  A GYADG    L     E              G 
Sbjct: 232 RTVTPGETVGYGNSWTADTMVTLATVAAGYADGLKRALGNAVGEACFQH--------DGK 283

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            +PI+G+++MD+   DI+    +     +Q+ GP   +DD+A  +GT  Y++L  +G RY
Sbjct: 284 TLPIVGRVSMDLITVDISALSDVP--QTLQLIGPGQGVDDLADWAGTIGYEILTSLGARY 341

Query: 366 AKFY 369
            + Y
Sbjct: 342 DRHY 345


>gi|33862083|ref|NP_893644.1| alanine racemase [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|33634301|emb|CAE19986.1| putative Alanine racemase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 395

 Score =  261 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 108/383 (28%), Positives = 180/383 (46%), Gaps = 31/383 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   A+++N   +   L  N    AVVK + YG   + ++      G     V 
Sbjct: 22  QRAWIEVSGKAIESNVRQLRSKLKNNCEFMAVVKADGYGHDAKVVSEKAIKGGASQLGVA 81

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EG+KLR +   A I VL  ++      I F  +L+P IS+  +    + +  S  + 
Sbjct: 82  TLKEGIKLRSFGINAPILVLGNLYTKKDLLICFRNDLMPTISTFRECLICNNIGKSNNLK 141

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L+VDTG +RLG    + +   +N  + +   +  I SHLACAD+           +
Sbjct: 142 FSLHLKVDTGMSRLGFECDQFVQQFNNIKSLENIAVKGIYSHLACADEKNALNPKSSTQL 201

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSH 230
           Q E+F+       I + + I+  LA+S+G++LG ++HF + R G+S+YG      IN++ 
Sbjct: 202 QKEKFQELLKIIDIDNTQNIKIHLANSAGMVLGKDFHFDMVRVGLSMYGYDPSVNINENL 261

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  +A++  +R    G  VSYG +    R + +AV +IGYADG    LSG  S  
Sbjct: 262 FLKPALFLKAKVTFVRTIEKGIGVSYGNKFVSDRKTKLAVLSIGYADGIIRNLSGKIS-- 319

Query: 291 SPSVFLGGKGFIKGYM-VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                      I      P +G ITMD  M DITDS  IEVG  + + G +    I   D
Sbjct: 320 ----------LIHNKRLYPQVGSITMDQMMVDITDSNDIEVGSTMLLLGSEGDKSISPID 369

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
            A    +  +++L     R  + 
Sbjct: 370 WADKCNSIPWEILCSFKNRLPRV 392


>gi|291451858|ref|ZP_06591248.1| alanine racemase [Streptomyces albus J1074]
 gi|291354807|gb|EFE81709.1| alanine racemase [Streptomyces albus J1074]
          Length = 391

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 149/372 (40%), Gaps = 32/372 (8%)

Query: 17  KNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTP 76
           + N  ++ A +  A   AVVK +AYG G  + A A   AG     V +  E ++LR    
Sbjct: 2   RANVRALRARTDGAAYMAVVKADAYGHGMVRCAEAALQAGATWVGVATPYEALELRAAGV 61

Query: 77  Q---ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQVDTGF 132
               AR+        G  +   + +L   +S +  L        + G      L+ DTG 
Sbjct: 62  TPERARVMCWLWTPGGPWREGIEADLDMSVSDLWALAEVTEAARATGRRARIQLKADTGL 121

Query: 133 NRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLERFRTLISHY 189
            R G    +  D    +   +   L  +    SH ACAD+P     + QL RF  +    
Sbjct: 122 GRNGCQPADWADLVDRARAAEREGLVTVTGLWSHFACADEPGHPSIAAQLARFDEMSGRA 181

Query: 190 K-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                      +A+S  +L  P   F L RPGI++YG +          H ++ V+T  A
Sbjct: 182 YAGGLRPEVRHMANSPAVLTLPEARFDLVRPGIAMYGLSPAPELGTPADHGLRPVMTLAA 241

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + L++    G  VSYG        + + +  +GY DG P   SG            G  
Sbjct: 242 PLALVKHVPGGHGVSYGHHYVTAGPTTLGLVPLGYGDGVPRHASG-----------AGPV 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYD 356
            + G    + G+I MD  + D+      E G    +FGP    +   +D A A+GT  Y+
Sbjct: 291 LVDGKWRTVAGRIAMDQFVVDLGGETPPE-GTEAVLFGPGDRGEPGAEDWARAAGTIGYE 349

Query: 357 LLVRIGTRYAKF 368
           ++ RIG R  + 
Sbjct: 350 IVTRIGGRVPRV 361


>gi|149913818|ref|ZP_01902350.1| alanine racemase [Roseobacter sp. AzwK-3b]
 gi|149812102|gb|EDM71933.1| alanine racemase [Roseobacter sp. AzwK-3b]
          Length = 346

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 130/362 (35%), Positives = 184/362 (50%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A++ NW +++AL G ++TAAVVK +AYGL   ++AP L  AG + FFV   EEG
Sbjct: 6   LTIDLDAIRANWRALDAL-GTSQTAAVVKADAYGLDAGRVAPVLAAAGARSFFVAVAEEG 64

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR    P   I V  G   G  ++I    LIP+++SV Q+    +       H + +Q
Sbjct: 65  AALRKVLGPDVAIHVFSGHMAGDAELIGGAGLIPMLNSVDQM---IRHAEALPGHAFGVQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +D+G NRLG+   E       + ++     +L++SHLACAD+P   +N  QL+ FR +  
Sbjct: 122 LDSGMNRLGMEPSEWAAVRDVALSQ---SPTLVMSHLACADEPDHPMNLQQLQAFREMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
                   LA++ GIL+GP YHF LTRPGI LYGG          + VVT +  +I  R 
Sbjct: 179 GVTA-PLCLANTGGILMGPEYHFDLTRPGIGLYGGRPFEGA----RPVVTLDIPVIQCRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
               E V Y      TR + IA    GYADG    +                    G   
Sbjct: 234 LTPRETVGYANSFTATRPTRIATIGAGYADGIIRAMGPRS-----------HVLADGVPC 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI G+I+MD+   DITD        ++Q+ GP   +DD+A  +GT  Y++L  +G RY +
Sbjct: 283 PIAGRISMDLIGVDITDLGHDPE--HLQLLGPTQTVDDLADNAGTIGYEILTSLGARYVR 340

Query: 368 FY 369
            Y
Sbjct: 341 RY 342


>gi|148989349|ref|ZP_01820717.1| alanine racemase [Streptococcus pneumoniae SP6-BS73]
 gi|168493602|ref|ZP_02717745.1| alanine racemase [Streptococcus pneumoniae CDC3059-06]
 gi|194398697|ref|YP_002038309.1| alanine racemase [Streptococcus pneumoniae G54]
 gi|226711062|sp|B5E745|ALR_STRP4 RecName: Full=Alanine racemase
 gi|147925099|gb|EDK76179.1| alanine racemase [Streptococcus pneumoniae SP6-BS73]
 gi|183576433|gb|EDT96961.1| alanine racemase [Streptococcus pneumoniae CDC3059-06]
 gi|194358364|gb|ACF56812.1| alanine racemase [Streptococcus pneumoniae G54]
 gi|332199723|gb|EGJ13798.1| alanine racemase [Streptococcus pneumoniae GA41317]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|195977514|ref|YP_002122758.1| alanine racemase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|226711061|sp|B4U178|ALR_STREM RecName: Full=Alanine racemase
 gi|195974219|gb|ACG61745.1| alanine racemase Alr [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 366

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 160/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     ++DL A++ N   +        +T AVVK NAYG G   ++ A+ +  V
Sbjct: 1   MISSLHRPTVARVDLEAIQANIDKIQRHIPKKVKTYAVVKANAYGHGAVAVSKAVEDQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  I   + ++     L   ++S+  L    K   
Sbjct: 60  DGYCVSNLDEALELRQAGIDKEILILGVILASELQLAIKHQLTITVASLEWLELAKKESV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+      +   +  +    QL  I +H A AD+    +   
Sbjct: 120 DFSQLHVHVKVDSGMGRIGVRSLAEANQLISILSDMGVQLDGIFTHFATADESDHAMFDK 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           QL  F+ L+       A +   +S+  L      F   R GI +YG     N      P+
Sbjct: 180 QLTFFKQLVEQLDKRPALVHASNSATSLWHSETIFNAIRLGIVIYGLNPSGNSLSLPCPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+R++ +++  AG+ V YG          +    IGYADG+   + G       
Sbjct: 240 KEALSLESRLVHVKQIQAGDSVGYGASYVAAESEYVGTLPIGYADGWTRNMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  ++G    I+G+++MD     +  +    +G  + + G      I   DVA 
Sbjct: 294 ------KVLVEGEFCDIIGRVSMDQLTIRLLQAYP--IGTKVTLIGQQGKQVITATDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 YRGTINYEVLCLLSDRIPREY 366


>gi|329890148|ref|ZP_08268491.1| alanine racemase [Brevundimonas diminuta ATCC 11568]
 gi|328845449|gb|EGF95013.1| alanine racemase [Brevundimonas diminuta ATCC 11568]
          Length = 361

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 122/362 (33%), Positives = 184/362 (50%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL AL  N+ ++ A+SG A    VVK + YGLG   +   L   G + FFV    EG
Sbjct: 23  LNVDLDALARNYRTLGAVSG-APVNPVVKADGYGLGAAAVTQRLMAEGARTFFVARAAEG 81

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V+LR    P+  I++L G H     ++  +NL PVI+   QL  +             LQ
Sbjct: 82  VRLREAIGPEPVIYILDGCHGDGAAMLKASNLRPVINHPTQLQTWQ----AAGGGACGLQ 137

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG  +++A         +    L L+++HLACAD+PS+ +N  Q + +   ++
Sbjct: 138 IDTGMNRLGFRVEDAP--------EPFEGLQLVMTHLACADEPSNPMNRAQRDAYAAAVT 189

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            Y  +  S A+S G  LGP++ F + RPGI LYGG  +      +  V +  A+ + +R 
Sbjct: 190 RYPSVTRSFANSGGCFLGPDFAFDVVRPGICLYGGGPEGRPHDRITPVASLIAQAVQVRD 249

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AGE V Y    +  R   +A    GYADG   +               G+ FI G M 
Sbjct: 250 VPAGETVGYSQGYRAERPMRVATVGAGYADGVLRSYGPR-----------GQVFIAGEMR 298

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI+G+++MD+   D+T    +  GD ++IFG +  +DD A A+GT +Y+LL  I  R  +
Sbjct: 299 PIIGRVSMDVLAVDVTGL-DVTAGDPVEIFGANRLVDDAAAAAGTISYELLTSITPRVPR 357

Query: 368 FY 369
            Y
Sbjct: 358 VY 359


>gi|167554127|ref|ZP_02347868.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205321605|gb|EDZ09444.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 356

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            I  R  
Sbjct: 346 AIAPRVP 352


>gi|33241130|ref|NP_876072.1| alanine racemase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|81835791|sp|Q7V9Z2|ALR_PROMA RecName: Full=Alanine racemase
 gi|33238660|gb|AAQ00725.1| Alanine racemase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 386

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 109/382 (28%), Positives = 170/382 (44%), Gaps = 28/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   +++   A+K N  ++ +L        AVVK + YG G E +A A    G  +  V
Sbjct: 14  RQRAWVEVSPDAIKANTLAIRSLLDEQCLLMAVVKADGYGHGSETVAEAALAGGATNLGV 73

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-V 120
            +++E ++LR       I VL   I+P         +L+P +SS  +    +++      
Sbjct: 74  ATLQEALELRKAGIVCPILVLGNLINPEDLDACIHWDLMPTLSSAREALLCNQIAESHDK 133

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD----DPSSHVNS 176
                ++VDTG  RLG  L+ A +      N K   L  I SHLA AD      ++   S
Sbjct: 134 EFCVHIKVDTGMTRLGCDLRLASELIQLVDNLKNLSLRGIYSHLALADVEANGQANSFTS 193

Query: 177 VQLERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
            Q E+F TL+S        +   LA+S+G L     HF + R G++LYG +    +  + 
Sbjct: 194 KQKEKFETLLSSVMPRGKPLYRHLANSAGTLRDKGLHFDMVRVGLALYGYSPLKDLRNNF 253

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +Q  +   A++ L+R   +   VSYG      R S +AV  IGYADG    LSG  S  
Sbjct: 254 SLQPALAVRAKVTLLRDVPSDTGVSYGHTFITQRPSRLAVVGIGYADGISRALSGKMS-- 311

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDV 346
                      I G   P +G ITMD  + DIT+S  I++G  + + G      I   D 
Sbjct: 312 ---------VLIDGKFYPQVGSITMDQLVIDITESPQIQIGSVVTLLGVDGDSAITPYDW 362

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           +  SG+  +++L     R  + 
Sbjct: 363 SEISGSIPWEILCSFKYRLPRV 384


>gi|304382932|ref|ZP_07365414.1| Mur ligase domain protein/alanine racemase [Prevotella marshii DSM
           16973]
 gi|304335957|gb|EFM02205.1| Mur ligase domain protein/alanine racemase [Prevotella marshii DSM
           16973]
          Length = 824

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/373 (25%), Positives = 147/373 (39%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L AL  N +   + +    +   ++K N YG G  +IA  L +  V    V   
Sbjct: 463 TTLEVNLNALVENLNYYRSFMKPETKLVCMIKANGYGTGAVEIAKTLQDHRVDYLAVAVA 522

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH--P 123
           +EGV LR     + I ++        K +FD  L P + S   L    K          P
Sbjct: 523 DEGVTLRNNGITSSIMIMNPEMTA-FKTMFDYELEPEVYSFRLLDALIKAARKEGIAGYP 581

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG    Q+         ++       + SH   +D +     +  Q   
Sbjct: 582 VHIKLDTGMHRLGFDPQQDIEKLIDVFKHQNALIPRSVFSHFVGSDSNDFDDFSRHQFVL 641

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F              I   + +S+GI   P     + R GI LYG   + N         
Sbjct: 642 FDEASRKIQSAFPHKILRHIDNSAGIEHFPERQLDMCRLGIGLYGVNPRSNAIIHNVC-- 699

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ +R   A E + Y  +  + RDSLIA   IGYADG    L             
Sbjct: 700 TLKTTILQLRIVKAHETIGYSRRGTVERDSLIAAIPIGYADGLNRRLGNRH--------- 750

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   + G     +G I MD+ M D+T     + GD ++IFG  + +  ++ A  T  Y+
Sbjct: 751 -GYCLVNGKKADYIGNICMDVAMIDVTGI-DCKEGDAVEIFGDRLPVTVLSDALSTIPYE 808

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 809 VLTGISNRVKRVY 821


>gi|296268597|ref|YP_003651229.1| alanine racemase [Thermobispora bispora DSM 43833]
 gi|296091384|gb|ADG87336.1| alanine racemase [Thermobispora bispora DSM 43833]
          Length = 381

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 152/377 (40%), Gaps = 27/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            + ++DL A+++N   +   +G A   AVVK + YG G   +A     AG        V 
Sbjct: 12  AQARVDLAAVRHNVSLLAEHAGGAELMAVVKADGYGHGAVPVARTCVAAGAARIGTALVT 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYA 125
           E + LR     A I         +       ++     ++  +   +      G +    
Sbjct: 72  EAIALRDAGITAPILAWIFTPGERPDEALRRDIELSAGALWAIDEIAAAARRTGRTAKVH 131

Query: 126 LQVDTGFNRLGLSLQEALDFTHN---SFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           L+VDTG +R G +L +      +      +   +++ I SHLACAD P + VN  QL  F
Sbjct: 132 LKVDTGMSRAGATLDDWPALLQHALAVQAEGSIEITGIWSHLACADTPENPVNERQLAVF 191

Query: 183 RTLISHYK------GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
              +          G+   +A+S+  L  P   + + RPGI++YG +         ++  
Sbjct: 192 DQALRIADKAGVSSGVIRHIANSAATLTLPAARYDMVRPGIAIYGLSPAPRHGDFGLRPA 251

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  AR+  +++  AG  VSYG      R + + +  +GYADG     S      +    
Sbjct: 252 MTLVARLSSVKRVAAGAGVSYGHTYVAERATTLGIVPLGYADGIMRAGSNRLEVLAAGRR 311

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
               G            + MD    D+ D    E GD + +FGP    +    + A   G
Sbjct: 312 RRIAGR-----------VCMDQFAIDLGDDP-AEPGDEVILFGPGDHGEPTCQEWADQLG 359

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y+++ +IG R  + 
Sbjct: 360 TITYEIVTKIGGRVPRI 376


>gi|154500483|ref|ZP_02038521.1| hypothetical protein BACCAP_04155 [Bacteroides capillosus ATCC
           29799]
 gi|150270714|gb|EDM98010.1| hypothetical protein BACCAP_04155 [Bacteroides capillosus ATCC
           29799]
          Length = 715

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 106/380 (27%), Positives = 153/380 (40%), Gaps = 30/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +ID +AL +N   +  L        AVVK NAYG G    A    ++GV+ F V +
Sbjct: 346 RAWAEIDRSALVHNISQLTGLLPSGCELMAVVKANAYGHGDVLTARVCMSSGVKAFAVAT 405

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EEG++LR    +  I +L    P Q + +    L   + S       S           
Sbjct: 406 LEEGIRLRQAGMKGEILILGWTPPEQAQQLTRWRLSQAVVSRTYAEELSHSAH---RVKV 462

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--VNSVQLERF 182
            L VDTG +RLGLS  +          K+L    L                    QL RF
Sbjct: 463 HLAVDTGMHRLGLSWDDGDGLLAVCRLKQLRVTGLFTHLAFSESLEPDAVGHTREQLHRF 522

Query: 183 RT----LISHYKGIEASLASSSGILLG--PNYHFQLTRPGISLYGGTDKINKSHPM---- 232
                 +IS   G  A  A SS  LL           RPGI+LYG   + ++        
Sbjct: 523 YQAADLVISAGYGPVALHALSSYGLLNCPKQAGMAYARPGIALYGVLSRPDEQVGTLPDL 582

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++  A+I  I     G+   Y G    +  + +A   IGYADGYP +LS        
Sbjct: 583 RPVLSLRAKIARIHNLEPGDCAGYDGAFAPSASARVAAVTIGYADGYPRSLSNG------ 636

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                GK  I+G   P+ G I MD  + D+T     +  D + + G D    +  ++VA 
Sbjct: 637 ----KGKVLIRGKFAPVAGLICMDQLLVDVTGIPEAQEDDTVTLIGRDGENILTAEEVAR 692

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
            +GT   +LL R+G R  + 
Sbjct: 693 DAGTITNELLSRLGERVTRV 712


>gi|125624499|ref|YP_001032982.1| alanine racemase [Lactococcus lactis subsp. cremoris MG1363]
 gi|20137246|sp|Q9RLU5|ALR_LACLM RecName: Full=Alanine racemase
 gi|16974088|emb|CAB56755.2| alanine racemase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124493307|emb|CAL98277.1| Alr protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071289|gb|ADJ60689.1| alanine racemase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 155/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +      +DL A++NN          NA     VK +AYG G  +++ A+ +  V
Sbjct: 1   MKTSPHRNTSAIVDLKAIRNNIEKFKKHINPNAEIWPAVKADAYGHGSIEVSKAVSDL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR +     I VL GI P    I    N+     S+  L    +  +
Sbjct: 60  GGFCVSNLDEAIELRNHLVTKPILVLSGIVPEDVDIAAALNISLTAPSLEWLKLVVQEEA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   + VD+G  R+G+   E  +      +K       I +H A AD         
Sbjct: 120 ELSDLKIHIGVDSGMGRIGIRDVEEANQMIELADKYAINFEGIFTHFATADMADETKFKN 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           Q  RF  +++        +   +++  L        + R GIS+YG       +     +
Sbjct: 180 QQARFNKIMAGLSRQPKFIHSTNTAAALWHKEQVQAIERLGISMYGLNPSGKTLELPFEI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + +  I+K  AGE V YG   + + ++ I    IGYADG+   + G       
Sbjct: 240 EPALSLVSELTHIKKIAAGETVGYGATYETSEETWIGTVPIGYADGWTRQMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  + G    I+G++ MD  M  +  S  +  G  + + G D    I   DVA 
Sbjct: 294 ------KVLVDGKFCEIVGRVCMDQMMIKLDKSYPL--GTKVTLIGRDKANEITTTDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 WRGTINYEVLCLLSDRIKRIY 366


>gi|313145406|ref|ZP_07807599.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134173|gb|EFR51533.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 840

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 482 LEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 541

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + +   L    K        + P  
Sbjct: 542 GSDLRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH 600

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG   ++         N+       + SH   +D          Q+ER+  
Sbjct: 601 VKLDTGMHRLGFEEKDIPQLIRRLKNQNAVIPRSVFSHFVGSDSPQFDAFTRQQIERYEH 660

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +         I   + +++GI   P   F + R GI LYG +   N      +  T +
Sbjct: 661 MSTELQEAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSVINNVS--TLK 718

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L              G 
Sbjct: 719 TTILQIRDVAEEDTVGYSRKGHLVRPSRIAAIPIGYADGLNRHLGCGH----------GY 768

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD      GD   IFG ++ +  ++    T  Y++L 
Sbjct: 769 CLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAVIFGDELPITVLSDTLDTIPYEVLT 827

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 828 GISTRVKRVY 837


>gi|15903583|ref|NP_359133.1| alanine racemase [Streptococcus pneumoniae R6]
 gi|15459204|gb|AAL00344.1| Alanine racemase [Streptococcus pneumoniae R6]
          Length = 374

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 13  HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 72  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 131

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 132 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 191

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 192 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 251

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 252 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 301

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 302 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 357

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 358 NYEVVCLLSDRIPREY 373


>gi|323138212|ref|ZP_08073284.1| alanine racemase [Methylocystis sp. ATCC 49242]
 gi|322396464|gb|EFX98993.1| alanine racemase [Methylocystis sp. ATCC 49242]
          Length = 382

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 125/364 (34%), Positives = 194/364 (53%), Gaps = 12/364 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL+AL +NW +++ L G A   AVVK + YG+G   +  AL  AG + FFV +V EG
Sbjct: 25  LTVDLSALVSNWRALSTLGGQAECGAVVKADGYGVGQIPVMRALLAAGCRTFFVATVVEG 84

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
              R   P+A I+VL G+ PG    +    L P I S  +   + +   + G     A+ 
Sbjct: 85  ETARALAPEATIYVLDGVAPGCALRLAAARLRPAIGSFAELEEWAAAGRTLGRKLEAAIH 144

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            DTG NRLG S  +A D        K    ++++SHL+ +  P + VN+ Q+  F     
Sbjct: 145 FDTGMNRLGFSPADAADVA---ERAKAIAPTVVMSHLSTSQIPEAPVNARQIAAFEETRR 201

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           H+ G+ AS+A+SS + L    HF+LTRPG +LYGG      ++PM+ VV+  ARII +R 
Sbjct: 202 HFPGLAASMANSSAVFLPEKPHFELTRPGYALYGGNPTPGAANPMRAVVSLHARIIAMRD 261

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V Y G     R S +A    GYADG P       S  +      G+  + G   
Sbjct: 262 LAPGDCVGYDGIWTAARPSRVATIGAGYADGLP------VSATAAPKKPAGEAIVGGVRC 315

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P +G+++MD  + D+TD+   + + G ++++ G  I ++++A  + T  Y++L R+G RY
Sbjct: 316 PFIGRVSMDYIVLDVTDAPREAAQRGAWVELLGETIDVEELAGRARTIGYEVLTRLGRRY 375

Query: 366 AKFY 369
           A+ Y
Sbjct: 376 ARRY 379


>gi|221194906|ref|ZP_03567962.1| alanine racemase [Atopobium rimae ATCC 49626]
 gi|221184809|gb|EEE17200.1| alanine racemase [Atopobium rimae ATCC 49626]
          Length = 383

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 103/389 (26%), Positives = 164/389 (42%), Gaps = 33/389 (8%)

Query: 3   SNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +N +   +I+L AL+ N  +    L+   +  A+VK +AYG G    A AL + G   F 
Sbjct: 5   NNRWAWAEINLGALRRNAKAFKAQLARGVKFMAIVKADAYGHGAAACAKALRSVGADQFG 64

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGV 120
           V +V+EG+ LR    +  I VL          +   +L+P +  +     +     + G 
Sbjct: 65  VATVDEGIALRQSGIEDPILVLNQPPLESIDDLVTFDLMPSVYEIDFALGFGEASSAAGK 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
              Y L +D+G  R+G+  +EAL+        +  + +   +H A AD       ++Q+ 
Sbjct: 125 VGKYHLAIDSGMTRIGVRREEALELRRAIDFHRGLECAGTFTHFATADLLDDWDFALQVN 184

Query: 181 RFRTLIS--HYKGIEASL---ASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQ 233
           RF   +S  H  G+E  L    ++ G +L P+  F + R GI LYG     N      ++
Sbjct: 185 RFTEAVSVIHEAGLETGLVHADNTPGTILHPDVQFDMCRIGIGLYGLHPAENTIPRIALE 244

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSP 292
            V++   R+        G+ V YG   ++ R +  +A   IGYADG    LS        
Sbjct: 245 PVMSVRGRVTRAIYPNVGDGVGYGLTWRVPRKNIQVATVPIGYADGLARCLSNRMD---- 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTM--FDIT------DSLSIEVGDYIQIFGPD---- 340
                    + G     +G I MD  M   DI           +  GD + I G D    
Sbjct: 301 -------VLVDGMRARQVGNICMDQFMFAVDINRARSYRPGYEVIEGDMVTIMGADGDEY 353

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           I  D++A   GT NY+++   G R  K Y
Sbjct: 354 ISADEIAKLRGTINYEVVCDFGMRLDKVY 382


>gi|295090179|emb|CBK76286.1| alanine racemase [Clostridium cf. saccharolyticum K10]
          Length = 710

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 103/382 (26%), Positives = 163/382 (42%), Gaps = 31/382 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                +++    L  N  +++ L     +    VK NAYG G   IA AL   G++ F V
Sbjct: 341 QARAWIELSKQQLYQNVDALSQLLPPGCQLMPAVKANAYGHGAVLIAKALQEKGIRAFCV 400

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            SV EGV+LR       I +L   HP    +++   L   +   P     +   +C    
Sbjct: 401 ASVTEGVELRKNGITGTILILGYTHPDSFPLLWKYRLTQTVVDYPYAQSLN---ACRKKV 457

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQL 179
              L++DTG +RLG+   + ++     F      +  I +HL  +D            Q 
Sbjct: 458 QVHLKIDTGMHRLGIR-SDHIEEISRMFQMDNLLVDGIYTHLCVSDSMTAADREFTYQQA 516

Query: 180 ERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGG----TDKINKSH 230
             F TL+              L++S G++  P +     R GI+LYG      D+ N S 
Sbjct: 517 NAFYTLLEKLSERGISCPNIHLSASYGLIHYPEFPSNYARIGIALYGMLSSRQDEENCSI 576

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
           P+  V++ +AR+  +R    GE   YG +     +  IAV +IGYADG P +LS      
Sbjct: 577 PLFPVLSVKARVSSVRDLYKGEGAGYGLRYVAKENRQIAVLSIGYADGIPRSLSNGH--- 633

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDV 346
                  G+  I G   PI+G I MD  + D+TD   ++ GD   + G     +I   D+
Sbjct: 634 -------GRVLINGQFAPIIGNICMDQMLVDVTDIKEVKQGDIAVLIGKSGDLEITAYDL 686

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  + +   ++L R+G R  + 
Sbjct: 687 AEQTESITNEILSRLGARLERI 708


>gi|110641415|ref|YP_669145.1| alanine racemase [Escherichia coli 536]
 gi|191171055|ref|ZP_03032606.1| alanine racemase [Escherichia coli F11]
 gi|300996024|ref|ZP_07181358.1| alanine racemase [Escherichia coli MS 200-1]
 gi|110343007|gb|ABG69244.1| alanine racemase, catabolic [Escherichia coli 536]
 gi|190908787|gb|EDV68375.1| alanine racemase [Escherichia coli F11]
 gi|300304631|gb|EFJ59151.1| alanine racemase [Escherichia coli MS 200-1]
 gi|324015669|gb|EGB84888.1| alanine racemase [Escherichia coli MS 60-1]
          Length = 356

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPYARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +   +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVLTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|53712185|ref|YP_098177.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides fragilis YCH46]
 gi|52215050|dbj|BAD47643.1| alanine racemase [Bacteroides fragilis YCH46]
          Length = 848

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 490 LEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 549

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + +   L    K        + P  
Sbjct: 550 GSDLRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH 608

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG   ++         N+       + SH   +D          Q+ER+  
Sbjct: 609 VKLDTGMHRLGFEEKDIPQLIRRLKNQNALIPRSVFSHFVGSDSAQFDAFTRQQIERYEK 668

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +           I   + +++GI   P   F + R GI LYG +   N      +  T +
Sbjct: 669 MSKELQDAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSIINNVS--TLK 726

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L              G 
Sbjct: 727 TTILQIRDVAEEDTVGYSRKGHLIRPSRIAAIPIGYADGLNRHLGCGH----------GY 776

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD      GD   IFG ++ +  ++ A  T  Y++L 
Sbjct: 777 CLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDELPITALSDALETIPYEVLT 835

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 836 GISTRVKRVY 845


>gi|254475313|ref|ZP_05088699.1| alanine racemase [Ruegeria sp. R11]
 gi|214029556|gb|EEB70391.1| alanine racemase [Ruegeria sp. R11]
          Length = 345

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 185/365 (50%), Gaps = 25/365 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +L I+L AL  NW +++AL+ N  TAAVVK N YGL   ++  AL  AG ++FFV   E
Sbjct: 4   AKLTINLDALVTNWRNLDALT-NCETAAVVKANGYGLDAGRVGQALAKAGARNFFVAIAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G   G  K++ D  L P+++S+ Q+  + + +     H + 
Sbjct: 63  EGVALRRALGPGPGISVFAGHMEGDAKLLRDFQLTPMLNSLDQMLRHFESL---PGHAFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +         L++SHLACAD+PS  +N+ QL+ F  L
Sbjct: 120 VQLDSGMNRLGMEAAEWAAVRDIAL---GQGPVLVMSHLACADEPSHPMNAQQLQTFSEL 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SL+++ G+LLG NYHF L RPGI LYGG    +       V   +  +I I
Sbjct: 177 TDG-LDVPRSLSATGGLLLGRNYHFDLCRPGIGLYGGQPFGDA----LPVAQLDLPVIQI 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG      R S IA  A GYADG    L             G   F    
Sbjct: 232 RDLDVGETVGYGNAWSAQRPSRIATVAAGYADGLHRALGNG----------GISVFAGDT 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P+ G+++MD+   DITD        ++ I      +D +A A GT  Y++L  +G+RY
Sbjct: 282 PCPVAGRVSMDLITVDITDLPD--SPSHLTILNEQQTVDMLADAGGTIGYEILTSLGSRY 339

Query: 366 AKFYT 370
           A+ YT
Sbjct: 340 ARSYT 344


>gi|259501954|ref|ZP_05744856.1| alanine racemase [Lactobacillus antri DSM 16041]
 gi|259170131|gb|EEW54626.1| alanine racemase [Lactobacillus antri DSM 16041]
          Length = 374

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 149/374 (39%), Gaps = 29/374 (7%)

Query: 11  IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I+L AL  N  +  A L  +++  AVVK NAYG G   +A A   AG     V  ++E +
Sbjct: 13  INLRALGENIQAQKAALPADSKILAVVKANAYGHGLVPVAQAALRAGATGMCVAILDEAL 72

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSKLMSCGVSHPYAL 126
           ++R         VL      +  +  +  +   + S+        +++  +        L
Sbjct: 73  EIRDSGLDVITLVLGITPVEEANVAAEAGVSLTVGSLDWLTKYHQFARQFNWKKPLKIHL 132

Query: 127 QVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            VDTG  R+G  ++ E              +   + +H A AD         Q   ++  
Sbjct: 133 AVDTGMGRIGFTNVAEFNQAVKILRRYPEFEFEGMFTHFATADSADHTYFDRQYALWQKF 192

Query: 186 ISHYKGIEA--SLASSSGILLGPNYHF-QLTRPGISLYGGTDK---INKSHPMQTVVTAE 239
           I+    +     +A+S+  L   +       R G+S+YG       + +   +Q V T  
Sbjct: 193 IASLDELPPYTHMANSATGLWHRDQITANTIRMGLSMYGYNPSGTDLPEDLHLQPVGTLR 252

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + I  ++K  AGE VSYG       D  +A   IGYADGYP  ++G             K
Sbjct: 253 SSISFVKKLAAGEAVSYGATYTAKHDEWLATVPIGYADGYPRCMTGF------------K 300

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             + G   PI G++ MD  M  +     ++    + + G      I  +++A  + T NY
Sbjct: 301 VLVDGQYCPIAGRVCMDQMMVRLPKYYPVD--TPVVLMGRSGALTITAEEMAEQAQTINY 358

Query: 356 DLLVRIGTRYAKFY 369
           ++L     R  + Y
Sbjct: 359 EILTNFNNRIHRTY 372


>gi|148997751|ref|ZP_01825315.1| alanine racemase [Streptococcus pneumoniae SP11-BS70]
 gi|168575112|ref|ZP_02721075.1| alanine racemase [Streptococcus pneumoniae MLV-016]
 gi|307068325|ref|YP_003877291.1| alanine racemase [Streptococcus pneumoniae AP200]
 gi|147756250|gb|EDK63292.1| alanine racemase [Streptococcus pneumoniae SP11-BS70]
 gi|183578867|gb|EDT99395.1| alanine racemase [Streptococcus pneumoniae MLV-016]
 gi|306409862|gb|ADM85289.1| Alanine racemase [Streptococcus pneumoniae AP200]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ I L A++ N   M           AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKVLIHLGAIRQNIQQMGTHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|169832829|ref|YP_001695074.1| alanine racemase [Streptococcus pneumoniae Hungary19A-6]
 gi|226711063|sp|B1I755|ALR_STRPI RecName: Full=Alanine racemase
 gi|168995331|gb|ACA35943.1| alanine racemase [Streptococcus pneumoniae Hungary19A-6]
          Length = 367

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKCLPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|238019929|ref|ZP_04600355.1| hypothetical protein VEIDISOL_01805 [Veillonella dispar ATCC 17748]
 gi|237863453|gb|EEP64743.1| hypothetical protein VEIDISOL_01805 [Veillonella dispar ATCC 17748]
          Length = 370

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L I+ + ++ N   +  +L   + + AV+K N YG G   +       G +   V 
Sbjct: 2   RPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE V LR       I++L    P   +++ DTN IP +     L    K+  +  +  
Sbjct: 62  IPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLEALDKVAENHDMII 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+ VDTG +R+G+  ++A++F     + +  ++    SH++ AD         Q ++F
Sbjct: 122 RVAVAVDTGMHRIGIKPEDAVEFIKRVESYENLEVDGFFSHMSNADAADQSHAHGQAQKF 181

Query: 183 RTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
             ++   +           LA+S+G+L   +  F   RPGI  YG    ++      ++ 
Sbjct: 182 HKMVDEIRAFRPDADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++  + ++ ++   AGE + YG          IA   +GYADGYP +LS          
Sbjct: 242 VLSFHSEVVHVQHLEAGEGIGYGSTYVTPEPMTIATIPVGYADGYPRSLSNR-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I G   P++G+I MD  M  + D+++++ GD + + G      I   ++A  +
Sbjct: 294 ---GTVLIHGTRCPVVGRICMDQFMVAVPDTITVQPGDKVVLLGSQGHESISALEIAALA 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++      R  + Y
Sbjct: 351 STIPYEIFCGFSERVPRQY 369


>gi|149001990|ref|ZP_01826944.1| alanine racemase [Streptococcus pneumoniae SP14-BS69]
 gi|237649236|ref|ZP_04523488.1| alanine racemase [Streptococcus pneumoniae CCRI 1974]
 gi|237821996|ref|ZP_04597841.1| alanine racemase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759799|gb|EDK66789.1| alanine racemase [Streptococcus pneumoniae SP14-BS69]
 gi|332074034|gb|EGI84512.1| alanine racemase [Streptococcus pneumoniae GA41301]
          Length = 367

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ I L A++ N   M           AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKVLIHLGAIRQNIQQMGTHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|160941522|ref|ZP_02088855.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435548|gb|EDP13315.1| hypothetical protein CLOBOL_06421 [Clostridium bolteae ATCC
           BAA-613]
          Length = 394

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 161/373 (43%), Gaps = 26/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++DL  +  N   + A++    + AAVVK + YG G   IAPA+   G     V ++ E
Sbjct: 18  VEVDLDRIAFNVRQIKAMAGPGTQVAAVVKADGYGHGALGIAPAIMENGASLLAVATLSE 77

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
            V+L+   P   + ++          + +  +I  I ++ Q    ++L S         +
Sbjct: 78  AVELKQAYPGYPVLIMGLTPDRLLPYVLEYGIIQTIDTLAQARLLNRLASEKKQQAVIHI 137

Query: 127 QVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + DTGF+R+G     E+LD      +    +   I SHLA  DD S   N VQ   F   
Sbjct: 138 KYDTGFHRIGFPDCPESLDEIRQICSMPWLKPEGIYSHLALKDDQS---NQVQFRCFMDA 194

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           ++             +A S   +  P Y   + R G  +YG          ++  +T + 
Sbjct: 195 VNELESEGCHFRYKHIADSIAAVDFPEYRLDMIRAGAIVYGLKGFHKGQLDIRQALTFKT 254

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI  I   L G+ VSY       +D+ +A    GYADGYP  L G               
Sbjct: 255 RISHITPVLKGQGVSYDYLWTAPQDTRVAALPFGYADGYPRNLRG-----------KAMV 303

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            ++G  VP++G I MD  M D+TD    ++GD + I+G      + +D V+  +GT   +
Sbjct: 304 TLRGKQVPVIGVICMDQCMIDLTDVPEAQIGDQVIIYGDGSGNTLDIDAVSRLAGTNKNE 363

Query: 357 LLVRIGTRYAKFY 369
           ++ R+  R  + Y
Sbjct: 364 IVARLTRRPPRIY 376


>gi|51104395|gb|AAT96856.1| DadX [Rhizobium etli]
          Length = 377

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 192/365 (52%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+ G + FFV    E 
Sbjct: 23  LTIDLAALGRNYLKLASMLAPVRAGAVVKADAYGLGAERVAQTLYDQGCRHFFVAQFVEA 82

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V+LR      A+IFVL G+ PG E    ++ +IPV++S+ Q   +S        S P  L
Sbjct: 83  VRLRPALAEDAQIFVLNGLQPGNEVACAESGIIPVLNSLAQWRQWSATARLLTRSLPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG   +E  +      +    ++  I+SHLACAD+  S  N  QL     + 
Sbjct: 143 QFDTGMSRLGFPWEERAELAAVIGDGANVEILFIMSHLACADELDSGQNGDQLAEMARIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             + G + S A+S G+ LG  YH  L RPGI+LYGG      ++PM+ VV  +  ++  R
Sbjct: 203 DEFPGFDISFANSGGLFLGDAYHGVLARPGIALYGGAPNAGGTNPMEPVVRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              +G  + YGG     R++ +A  A GYADG P +L              G  + KG  
Sbjct: 263 TVPSGARIGYGGAHVTRRETRLATIAAGYADGLPRSLGDC-----------GAVYHKGIR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DIT       E     ++ GP+  L+DVA A+GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSATVDITALPEGGAEAWKPCRMLGPNQTLEDVAGAAGTISYEILTGLGDR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YDRQY 376


>gi|332523529|ref|ZP_08399781.1| alanine racemase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314793|gb|EGJ27778.1| alanine racemase [Streptococcus porcinus str. Jelinkova 176]
          Length = 368

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 88/382 (23%), Positives = 160/382 (41%), Gaps = 28/382 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +      +DL  ++NN  ++      + +  AVVK NAYG G  +++ A+    V
Sbjct: 1   MISSIHRPTVATVDLKVIQNNIKAVQGHIPKDTKIYAVVKANAYGHGAVEVSKAIDKE-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLM 116
             + V++++E ++LR       I VL  +      +  +    I V S        + L 
Sbjct: 60  DAYCVSNLDEALELRQAGISKEILVLGVVLADDLLLAIENQITITVASQEWLDDAQAFLG 119

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
               +    ++VD+G  R+G+      D       +    +  I +H A AD+  +    
Sbjct: 120 GDLTNLHVHVKVDSGMGRIGVRSLAEADQLIAHLRQAKVIVDGIFTHFATADEADTRKFE 179

Query: 177 VQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHP 231
            QL  F  L++H     A +   +S+  L   +  F   R GI++YG       +N  +P
Sbjct: 180 TQLNFFTDLVNHLTYKPALVHASNSATSLWHSDTIFNAVRLGIAIYGSNPSGSELNLPYP 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++  +R++ +++  AG+ V YG     T    +    IGYADG+   L G      
Sbjct: 240 LKPALSLRSRLVHVKEIHAGDTVGYGATYTATETEFVGTIPIGYADGWTRDLQGF----- 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  I G    I+G+++MD     +       +G  + + G     +I   D+A
Sbjct: 295 -------EVLIDGQFCQIIGRVSMDQITVRLPKVYE--IGKLVTLIGTSGDQEITATDLA 345

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 346 EKKGTINYEVLCLLSDRIPREY 367


>gi|294084215|ref|YP_003550973.1| alanine racemase [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292663788|gb|ADE38889.1| alanine racemase [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 383

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 123/377 (32%), Positives = 190/377 (50%), Gaps = 27/377 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           R+ IDL A+ +NW  +++LS  +   AA+VK N YGLG   +  ALY AG + FFV +++
Sbjct: 18  RIDIDLGAIAHNWLYLDSLSPKSTITAAMVKANGYGLGANHVGAALYKAGCRQFFVANLD 77

Query: 67  EGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           E V  R Y        A+I VL+G H GQE  +    L PV++ + Q++ +         
Sbjct: 78  EAVSFRTYLDNISISDAQIMVLHGCHRGQEHDMRAYRLTPVLNDLEQVSRWRLYAQNANE 137

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           ++P  L +DTG  RLG    +      N       +++ I+SHL   +      N+ Q  
Sbjct: 138 TYPAMLHLDTGMTRLGFDPDQTDWLIENKQALNGLEITYIMSHLISGEISDDPANTAQKT 197

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-----KSHPMQTV 235
           RF    S + GI+ASLA+S G+ LG  +H+Q+TRPGI++YG            S+ +++ 
Sbjct: 198 RFDEYRSFFGGIKASLANSGGVFLGNEFHYQMTRPGIAIYGVHPCGKDQAITDSNGLKSC 257

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T   RII +R A  G  V YGG  +L+R S IA   +GYADGY   LS           
Sbjct: 258 ITWHGRIIQVRTAPEGATVGYGGTHRLSRPSRIATVGVGYADGYQRNLSN---------- 307

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLS---IEVGDYIQIFGPDIKLDDVALASGT 352
                 I G+  P++G+I+MD    D+TD      ++  +   +      ++D+A  + T
Sbjct: 308 -KAFVNILGHRAPVIGRISMDSITIDVTDIPPNIMLKA-ETAALLSDLYSIEDMANDAST 365

Query: 353 TNYDLLVRIGTRYAKFY 369
             Y++L  I  R  + Y
Sbjct: 366 IPYEILTGISRRAIRRY 382


>gi|167750416|ref|ZP_02422543.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702]
 gi|167656567|gb|EDS00697.1| hypothetical protein EUBSIR_01390 [Eubacterium siraeum DSM 15702]
          Length = 379

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 18/370 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +    +IDL AL++N++ +  L+      AVVK NAYG   + +   L   GV+ + V++
Sbjct: 6   KRAWAEIDLDALEHNYNEIKKLAKGKDILAVVKANAYGHDDKAVCLKLQELGVKYYGVSN 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           + EG KLR +     I             + +  +     SV      S    S GV  P
Sbjct: 66  LWEGEKLRCHGITGTILTFGYTDEDYFDELLEYGITQTAGSVQYAKQLSDYAVSKGVKLP 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V+TG  R+G+  Q+ +                  +     D         Q E+  
Sbjct: 126 VHIKVNTGMTRVGIDSQQEMLDILAMPGLDCKAAYTHFAAADSLDPSDVEYTDRQQEKLM 185

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV--VTAEAR 241
             I+  KG+     +S GI+   ++   + R G+ LYG         P      +T ++ 
Sbjct: 186 K-IAKDKGLLIHSQNSGGIIYHGDFGGDIVRAGVILYGHYPNYPLEVPFDMKSVMTVKSV 244

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  ++   AG  +SYG      ++  +AV  IGYADGY    S             GK  
Sbjct: 245 VSQLKTIPAGTQISYGRTYTAEKEMTVAVIPIGYADGYFRDFS-----------SKGKML 293

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---DIKLDDVALASGTTNYDLL 358
           I G +  ++G++ MD T+ D+++   I+ GD + ++     +  +D  A    T  Y+L 
Sbjct: 294 INGVLCNVVGRVCMDQTIVDVSNVPDIKTGDIVYVYSDKCRETSVDYNASLIDTIGYELT 353

Query: 359 VRIGTRYAKF 368
             +  R  + 
Sbjct: 354 CAVALRIPRV 363


>gi|153006329|ref|YP_001380654.1| alanine racemase [Anaeromyxobacter sp. Fw109-5]
 gi|152029902|gb|ABS27670.1| alanine racemase [Anaeromyxobacter sp. Fw109-5]
          Length = 393

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 158/373 (42%), Gaps = 19/373 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL +N   + A +  ++  AVVK NAYG G   +  A   AG     V  
Sbjct: 11  RPVWAEIDLDALAHNVRLLAARAAPSKLYAVVKANAYGHGAIAVGRAALAAGASALAVVC 70

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
           V+E  +LR     A I V+    P     +   +L P ++S       +      GV   
Sbjct: 71  VDEAEELRRGGVDAPILVIGYTPPADAARVVALDLRPTVASADVAEALAVAAKRRGVPVA 130

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NR GL+    +            ++  + +H A A++        Q +  R
Sbjct: 131 VHLELETGLNRHGLTPDALVALATRLRAMPELRVEGLFTHFAAAEEGDQRFTRRQFDVLR 190

Query: 184 TLISHYKGI-EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEA 240
            + +    I E   A+S+ +LL      ++ R G+S+YG            ++ V++  A
Sbjct: 191 DVSARLSWIPERHCAASASLLLDHEMALEVVRAGLSMYGYRPAPWCGTDADLRPVLSLRA 250

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+  + +   G  V YG      R S +A+   GYADGY  +L                 
Sbjct: 251 RVARVLEVERGATVGYGRTWAAARPSRVALVMCGYADGYRRSLGNR-----------AHL 299

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            ++G   P++G++ MDM M D+T    +  GD   + G D    +  D++A  + T +++
Sbjct: 300 LVRGRRAPVVGRVAMDMCMVDVTAVPEVRAGDVATLLGRDGEERVDADELASLADTISWE 359

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 360 ILAGITARVPRLY 372


>gi|322375697|ref|ZP_08050209.1| alanine racemase [Streptococcus sp. C300]
 gi|321279405|gb|EFX56446.1| alanine racemase [Streptococcus sp. C300]
          Length = 367

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIYLGAIRQNIQQMGAHIPEGTLKWAVVKANAYGHGAVAVAMAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ V  +       +   S 
Sbjct: 65  SNIDEAIELRQAGLSKKILILGVSEIEAIALAKEYDITLTVAGVEWIQALLARETDLSSL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +       +   ++  I +H A AD+ S    + QLE F
Sbjct: 125 TVHLKIDSGMGRIGFREASEAEQAQTMLQQHGARVEGIFTHFATADEESDAYFNAQLECF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + +++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KAILASMKEVPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLTPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + +     G +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKIYPL--GTKVTLIGTNGGKEITATQVATYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|237731822|ref|ZP_04562303.1| alanine racemase [Citrobacter sp. 30_2]
 gi|226907361|gb|EEH93279.1| alanine racemase [Citrobacter sp. 30_2]
          Length = 356

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/366 (26%), Positives = 156/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   IDL ALK N       + +AR  +VVK NAYG G E++  AL       F + +
Sbjct: 3   RPILASIDLQALKQNLTITRQAAPDARVWSVVKANAYGHGIERVWNAL--GTTDGFAMLN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR    +  I +L G    ++  ++D   +             +          
Sbjct: 61  LEEAITLRERGWKGPILMLEGFFHAEDLTVYDNYRLTTCVHSNWQLKALQNARLKAPLDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG   +                   ++SH A A+ P     ++       
Sbjct: 121 YLKVNSGMNRLGFLPERVPTVWQQLRAMPNVGEMTLMSHFADAEHPEGIQEAMARI---A 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +       SL++S+  L  P  H+   RPGI LYG +         +  ++ V+T  +
Sbjct: 178 QATEELECRRSLSNSAATLWHPEAHYDWVRPGIILYGASPSGQWRDIANTGLKPVMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I+   AG+ V YGG+   + +  I + A GYADGYP                G   
Sbjct: 238 EIIGIQTLKAGDRVGYGGRYTASGEQRIGIVATGYADGYPRHA-----------PSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+  
Sbjct: 287 LVDGVRTGTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVATAAGTVGYELMCS 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LALRVP 352


>gi|261856961|ref|YP_003264244.1| alanine racemase [Halothiobacillus neapolitanus c2]
 gi|261837430|gb|ACX97197.1| alanine racemase [Halothiobacillus neapolitanus c2]
          Length = 367

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 159/372 (42%), Gaps = 20/372 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  L   I L A ++N+    A  G  R  AVVK +AYG G  + A A+ +     F V 
Sbjct: 2   SRPLVAHIRLDAFRHNYRLAKAAHGG-RALAVVKADAYGHGAVECARAIADE-ADGFAVA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EE + LR     A I +L G     E +    + + ++                    
Sbjct: 60  MIEEALSLRAAGITAPILLLEGFFDVSELLDIQIHNLWIVVHHRWQVDALLAAHLTRPIT 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++D+G +R+G++  +         N       +++SH A AD+P S     QLE F 
Sbjct: 120 VWLKMDSGMHRVGIAPDQYRATYERLKNHPSIAQIVLMSHFARADEPESGHMLQQLETFH 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQTVVTA 238
                      SL++S+ +L          RPGI LYG    + K+       ++ V+  
Sbjct: 180 AATMGIDA-PVSLSNSAAVLGWSGARADWARPGIMLYGADPFVGKAGASIAEQLRPVMRL 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           E  II +R    GE + YGG     R + + V + GYADGYP            +   G 
Sbjct: 239 EGGIISVRIIARGEPLGYGGAFVADRPTRVGVVSCGYADGYPR-----------TAPTGT 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G +  ++G+++MDM   D+T     ++G  ++++G  + ++ VA   GT  Y+LL
Sbjct: 288 PVAVDGQLTRLIGRVSMDMLTVDLTHLPQADIGSRVELWGDQVPVNAVASRVGTIAYELL 347

Query: 359 VRIGTRYAKFYT 370
             +  R    Y+
Sbjct: 348 CHV-KRARFEYS 358


>gi|182684640|ref|YP_001836387.1| alanine racemase [Streptococcus pneumoniae CGSP14]
 gi|182629974|gb|ACB90922.1| alanine racemase [Streptococcus pneumoniae CGSP14]
          Length = 374

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 13  HRPTKALIHLGAIRQNIQQMGAHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 72  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 131

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   K    +  I +H A AD+ S    + QLERF
Sbjct: 132 TVHLKIDSGMGRIGFREVSEVEQAQDLLQKHGVCVEGIFTHFATADEESDDYFNAQLERF 191

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 192 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 251

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 252 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 301

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 302 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 357

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 358 NYEVVCLLSDRIPREY 373


>gi|60680368|ref|YP_210512.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Bacteroides fragilis NCTC 9343]
 gi|60491802|emb|CAH06560.1| putative alanine racemase and
           UDP-N-acetylmuramoylalanyl-D-glutamyl,
           6-diaminopimelate-D-alanyl-D-alanyl ligase fusion
           protein [Bacteroides fragilis NCTC 9343]
 gi|301161901|emb|CBW21445.1| putative alanine racemase and
           UDP-N-acetylmuramoylalanyl-D-glutamyl,
           6-diaminopimelate-D-alanyl-D-alanyl ligase fusion
           protein [Bacteroides fragilis 638R]
          Length = 840

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 482 LEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 541

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + +   L    K        + P  
Sbjct: 542 GSDLRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH 600

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG   ++         N+       + SH   +D          Q+ER+  
Sbjct: 601 VKLDTGMHRLGFEEKDIPQLIRRLKNQNALIPRSVFSHFVGSDSAQFDAFTRQQIERYEK 660

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +           I   + +++GI   P   F + R GI LYG +   N      +  T +
Sbjct: 661 MSKELQDAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSIINNVS--TLK 718

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L              G 
Sbjct: 719 TTILQIRDVAEEDTVGYSRKGHLIRPSRIAAIPIGYADGLNRHLGCGH----------GY 768

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD      GD   IFG ++ +  ++ A  T  Y++L 
Sbjct: 769 CLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDELPITVLSDALETIPYEVLT 827

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 828 GISTRVKRVY 837


>gi|270292352|ref|ZP_06198563.1| alanine racemase [Streptococcus sp. M143]
 gi|270278331|gb|EFA24177.1| alanine racemase [Streptococcus sp. M143]
          Length = 374

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 152/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M           AVVK NAYG G   +A       V  F V
Sbjct: 13  HRPTKALIYLGAIRQNIQQMGDHIPKGTLKWAVVKANAYGHGAVAVA-TAIQEDVDGFCV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      +I +L         +  + ++   ++ V  +       +     
Sbjct: 72  SNIDEAIELRQAGLSKKILILGVSEIDAIALAKEYDITLTVAGVEWIQALLDKEADLTGL 131

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +       +   ++  I +H A AD+ S    + QLERF
Sbjct: 132 TVHLKIDSGMGRIGFREAGEAEQAQALLQQHGARVEGIFTHFATADEESDAYFNTQLERF 191

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + +++  K +      ++S+  L      F   R G S+YG       +N  + +   +T
Sbjct: 192 KAILASMKEVPELVHASNSATTLWHAETIFNAVRMGDSMYGLNPSGEVLNLPYDLTPALT 251

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 252 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFT---------- 301

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 302 --VLVDGQACPIVGRVSMDQITIRLPKVYPL--GTKVTLIGSNEDKEITATQVATYRGTI 357

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 358 NYEVVCLLSDRIPREY 373


>gi|253563777|ref|ZP_04841234.1| alanine racemase [Bacteroides sp. 3_2_5]
 gi|265765516|ref|ZP_06093791.1| alanine racemase [Bacteroides sp. 2_1_16]
 gi|251947553|gb|EES87835.1| alanine racemase [Bacteroides sp. 3_2_5]
 gi|263254900|gb|EEZ26334.1| alanine racemase [Bacteroides sp. 2_1_16]
          Length = 848

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + L    +   +VK +AYG G  +IA  L         V   +E
Sbjct: 490 LEVNLGAMVANLNHYRSMLKPETKMVCMVKASAYGAGSYEIAKTLQEHHADYLAVAVADE 549

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     A I ++        K +FD  L P + +   L    K        + P  
Sbjct: 550 GSDLRKAGITASIIIMDPELTA-FKTMFDYKLEPEVYNFHLLDALIKAAEKEGITNFPIH 608

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRT 184
           +++DTG +RLG   ++         N+       + SH   +D          Q+ER+  
Sbjct: 609 VKLDTGMHRLGFEEKDIPQLIRRLKNQNALIPRSVFSHFVGSDSAQFDAFTRQQIERYEK 668

Query: 185 LISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +           I   + +++GI   P   F + R GI LYG +   N      +  T +
Sbjct: 669 MSKELQDAFPHKILRHICNTAGIERFPGAQFDMVRLGIGLYGISPIDNSIINNVS--TLK 726

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ IR     + V Y  +  L R S IA   IGYADG    L              G 
Sbjct: 727 TTILQIRDVAEEDTVGYSRKGHLIRPSRIAAIPIGYADGLNRHLGCGH----------GY 776

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G   P +G I MD+ M D+TD      GD   IFG ++ +  ++ A  T  Y++L 
Sbjct: 777 CLVNGKKAPYVGNICMDVCMIDVTDI-DCREGDQAIIFGDELPITVLSDALETIPYEVLT 835

Query: 360 RIGTRYAKFY 369
            I TR  + Y
Sbjct: 836 GISTRVKRVY 845


>gi|311111926|ref|YP_003983148.1| alanine racemase [Rothia dentocariosa ATCC 17931]
 gi|310943420|gb|ADP39714.1| alanine racemase [Rothia dentocariosa ATCC 17931]
          Length = 437

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/387 (23%), Positives = 156/387 (40%), Gaps = 28/387 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL AL++N   +  + G  +  AVVK +AYG G   +A ++  AG     V  V E 
Sbjct: 22  AIIDLNALEHNTRVLKDMIGERKLIAVVKADAYGHGAYPVARSVLEAGADILGVVHVTEA 81

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR     A I               + ++I   S                     L+V
Sbjct: 82  LELRSEGITAPIIAWLHTPQTDFDEALEADIILGASGWDLEAIAEAANRTKKRARVHLKV 141

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G + ++       +   +   L ++  I SHLA AD+P     + Q+ R    
Sbjct: 142 DTGLGRNGSTFEDWPALVARALELEAAGLVRIEGIFSHLAVADEPERPETARQITRLNEF 201

Query: 186 I-----SHYKGIEASLASSSGILLGPNYHF--------QLTRPGISLYGGTDKIN---KS 229
           +     +        LA+S G + G +  +           R GI+LYG +       K 
Sbjct: 202 VTVARSAGLTPELVHLANSPGTITGASPLYNTNEAVLADAVRCGIALYGLSPLAGVSSKD 261

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T    +  +++  AG+ VSYG +    + + +A+  +GYADG P    G    
Sbjct: 262 LNLRPVMTLGTHVCNVKEVPAGQGVSYGLRYSTDKPTTLALIPLGYADGVPRIAEGAPVR 321

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV-----GDYIQIF--GPDIK 342
             P          +     ++G+I MD  + D+ +    +      G    +F  G +  
Sbjct: 322 IYPRADAANPV--EPRTYRVVGRIAMDQLVVDLEEPGLADPARGILGGSAVLFGSGDNPP 379

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++ A A+ T NY+++ RI  R  + Y
Sbjct: 380 VEEWAAAAQTINYEIVTRISPRVIRIY 406


>gi|282849282|ref|ZP_06258667.1| alanine racemase [Veillonella parvula ATCC 17745]
 gi|282580986|gb|EFB86384.1| alanine racemase [Veillonella parvula ATCC 17745]
          Length = 370

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L I+ + ++ N   +  +L   + + AV+K N YG G   +       G +   V 
Sbjct: 2   RPTYLTINTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE V LR       I++L    P   +++ DTN IP +     L    K+  +  +  
Sbjct: 62  IPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLEALDKVADNHDMII 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+ VDTG +R+G+  ++A++F     + +  ++    SH++ AD         Q ++F
Sbjct: 122 RVAVAVDTGMHRIGIKPEDAIEFIKRIESYENLEIDGFFSHMSNADAADQSHAHSQTQKF 181

Query: 183 RTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
             ++   +           LA+S+G+L   +  F   RPGI  YG    ++      ++ 
Sbjct: 182 HHMVDEIRAFRPEADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++  + ++ ++   AGE + YG          IA   +GYADGYP +LS          
Sbjct: 242 VLSFHSEVVHVQHIPAGEGIGYGSTYITAEPMTIATIPVGYADGYPRSLSNR-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I G   P++G+I MD  M  + D+++++ GD + + G      I   ++A  +
Sbjct: 294 ---GTVLIHGTRCPVVGRICMDQFMVAVPDTITVKPGDKVVLLGSQGHESISALEIAALA 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++      R  + Y
Sbjct: 351 STIPYEIFCGFSERVPRQY 369


>gi|260911429|ref|ZP_05918020.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 472 str. F0295]
 gi|260634476|gb|EEX52575.1| Mur ligase domain protein/alanine racemase [Prevotella sp. oral
           taxon 472 str. F0295]
          Length = 825

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/373 (24%), Positives = 151/373 (40%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+ +N +   A+   N +   ++K + YG G  +IA  L +       V   
Sbjct: 464 TTLEVNLNAMVDNLNYYRAMMHPNTKLVCMIKADGYGAGAVEIAKTLQDHRADYLAVAVA 523

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EG  LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 524 DEGATLRRNGITSSIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLEALIKAAEKEGITGFP 582

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
             +++DTG +RLG   + +         N+       + SH   +D D     +  Q ER
Sbjct: 583 VHIKLDTGMHRLGFDPEKDVPRLIERLHNQNALIPKSVFSHFVGSDADQFDDFSQQQFER 642

Query: 182 FR-----TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F         +    I   + +S+GI   P     + R G+ LYG   + N      +  
Sbjct: 643 FDVGSKMLQAAFEHHILRHIDNSAGIEHFPQRQLDMCRLGLGLYGINPRNNAIINNVS-- 700

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T    I+ +RK  AG+ V Y  +  +  DS+IA   IGYADG    L             
Sbjct: 701 TLRTTILQLRKVKAGDTVGYSRRGTIDHDSVIAAIPIGYADGLNRRLGNR---------- 750

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G   +       +G I MD+ M D+T       GD ++IFG ++ +  ++ A  T  Y+
Sbjct: 751 NGYCLVNNQQAEYVGNICMDVAMIDVTGI-DCHEGDSVEIFGDNLPVTVLSDALQTIPYE 809

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 810 VLTGISNRVNRVY 822


>gi|303257818|ref|ZP_07343828.1| alanine racemase [Burkholderiales bacterium 1_1_47]
 gi|330998760|ref|ZP_08322488.1| alanine racemase [Parasutterella excrementihominis YIT 11859]
 gi|302859421|gb|EFL82502.1| alanine racemase [Burkholderiales bacterium 1_1_47]
 gi|329576257|gb|EGG57773.1| alanine racemase [Parasutterella excrementihominis YIT 11859]
          Length = 360

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 94/368 (25%), Positives = 163/368 (44%), Gaps = 17/368 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  ID  AL+ N   + A SGN     VVK NAYG G   + P   +  V    +  
Sbjct: 3   RPIRALIDTYALEKNLSLLRAKSGNRFLWGVVKANAYGHGLIGLLPTF-DNWVDGLALLD 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EGV +R       + ++ GI      ++  +     VI +  Q+ +  K      +  
Sbjct: 62  PKEGVDIRKAGWAKAVLLIEGIFAASDIEMADEYGFETVIHNERQIEWLEKAELKN-TLR 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+ +TG NRLG   +          N    ++  +++H A A+        V ++   
Sbjct: 121 VHLKCNTGMNRLGFRPEAIPQVLFRLNNIPKVEVVDLLAHFANAEVTYEQDKPVTVQNQL 180

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
             +   +G+     S++G +L      +  R GI++YG +   N   +S  +  V+T E+
Sbjct: 181 AALIQLRGLLPMCLSNTGGILWHEAGDEAVRAGIAMYGVSPDGNVSSQSLGIDPVMTLES 240

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II  +    GE   YG +    R + +AV A GYADGYP                  + 
Sbjct: 241 EIIAFQDLQPGEACGYGSKFIAHRPTKLAVVACGYADGYPRK-----------DNPHREV 289

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            ++G  VP++G ++MDM   D+TD  ++ +G  ++I+G ++ +++VA   GT  Y+LL  
Sbjct: 290 VVEGKRVPVIGNVSMDMLTIDVTDLPNVRLGSKVEIWGKNLPVNEVAKGFGTIGYELLCD 349

Query: 361 IGTRYAKF 368
           +  R  + 
Sbjct: 350 VNQRVPRV 357


>gi|303231043|ref|ZP_07317785.1| alanine racemase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514307|gb|EFL56307.1| alanine racemase [Veillonella atypica ACS-049-V-Sch6]
          Length = 370

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 164/379 (43%), Gaps = 25/379 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L ID + ++ N   +  +L   + + AV+K N YG G   +       G +   V 
Sbjct: 2   RPTYLTIDTSLVRENLRKIKDSLPEWSTSTAVIKANGYGHGSVMMGRIAVEEGYESLAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             EE V LR       I++L    P   +++ DTN IP +     L   +K+  +  +  
Sbjct: 62  IPEESVPLRNAGIMVPIYLLGLTRPQSFELVADTNSIPAVCESTDLEALNKVADNHDMII 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+ VDTG +R+G+  + A++F     +     +    SH++ AD         Q ++F
Sbjct: 122 RVAVAVDTGMHRIGIKPENAVEFIKRIESYPNLAVDGFFSHMSNADAADQSHAHGQAQKF 181

Query: 183 RTLISHYKGIEAS------LASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
             ++   +           LA+S+G+L   +  F   RPGI  YG    ++      ++ 
Sbjct: 182 HKMVDEIRAFRPDADYRFSLANSAGLLSVKDSLFTDARPGIIQYGIMPSLDVPNRLGLKP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++  + ++ ++   AGE + YG          IA   +GYADGYP +LS          
Sbjct: 242 VLSFHSEVVHVQHLEAGEGIGYGSTYVTPEPMTIATIPVGYADGYPRSLSNR-------- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I+G   P++G+I MD  M  I D+++++ GD + + G      I   ++A  +
Sbjct: 294 ---GTVLIQGTRCPVVGRICMDQFMVAIPDTITVKPGDKVVLLGSQGHESISALEIAALA 350

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T  Y++      R  + Y
Sbjct: 351 STIPYEIFCGFSDRVPRQY 369


>gi|215486418|ref|YP_002328849.1| alanine racemase [Escherichia coli O127:H6 str. E2348/69]
 gi|312966424|ref|ZP_07780646.1| alanine racemase [Escherichia coli 2362-75]
 gi|215264490|emb|CAS08857.1| alanine racemase 2, PLP-binding [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288877|gb|EFR16775.1| alanine racemase [Escherichia coli 2362-75]
          Length = 356

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPYARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLANSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +   +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVLTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|188595863|pdb|2VD9|A Chain A, The Crystal Structure Of Alanine Racemase From Bacillus
           Anthracis (Ba0252) With Bound L-Ala-P
 gi|188595864|pdb|2VD9|B Chain B, The Crystal Structure Of Alanine Racemase From Bacillus
           Anthracis (Ba0252) With Bound L-Ala-P
          Length = 391

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 153/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVVK NAYG     +A     AG
Sbjct: 3   MEEAPFYRDTWVEVDLDAIYNNVTHIXEFIPSDVEIFAVVKGNAYGHDYVPVAXIALEAG 62

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +     L 
Sbjct: 63  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQXEWVDEAIXLW 122

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+  + E   F  +       +L  + +H A AD+  +   
Sbjct: 123 DGSSTMXYHINFDSGMGRIGIRERXELXGFLXSLEGAPFLELEGVYTHFATADEVETSYF 182

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 183 DXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 242

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++    +  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 243 FLPFXLEPALSLHTXVAHIKQVIXGDGISYNVTYRTXTEEWIATVAIGYADGWLRRLQGF 302

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 303 ------------EVLVNGXRVPIVGRVTMDQFMIHLP--CEVPLGTXVTLIGRQGDEYIS 348

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 349 ATEVAEYSGTINYEIITTISFRVPRIF 375


>gi|319949830|ref|ZP_08023848.1| alanine racemase [Dietzia cinnamea P4]
 gi|319436508|gb|EFV91610.1| alanine racemase [Dietzia cinnamea P4]
          Length = 409

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 160/376 (42%), Gaps = 26/376 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R +IDL A+++N   +   +  AR  AVVK +AYG G   ++ A    G     VT++ E
Sbjct: 11  RAEIDLDAIEHNSRVLVRSARGARVMAVVKADAYGHGAVPVSLAALRGGAHALGVTTIAE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSHPYAL 126
            ++LR     A I           +   + +  + + S     T        G       
Sbjct: 71  ALQLRSAGIDAEILAWLYSVSDDVRAAVEADVDLAIPSPAHLDTVLEAARRTGRRARVTP 130

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFR 183
           ++DTG  R G+SL+E               L +++ +++H A ADDP + V  +Q+ R  
Sbjct: 131 KIDTGLARSGISLEEWPAVLERLVTATAGGLVEVTGLMAHFAHADDPGNPVIDLQVARLH 190

Query: 184 TLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
             +   +G          A+S+  L  P   F++ RPGI+LYG          +   +T 
Sbjct: 191 ECVGQARGRGLDCPVNHHANSAATLTRPEDGFEMVRPGIALYGLNPVEGLEVDLVPAMTF 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A ++++++  AG+ VSYG       D+ +A+ A GYADG    LSG             
Sbjct: 251 SAEVLMVKRLAAGQGVSYGHTWHAPHDTTVALIAAGYADGVWRLLSGRLD---------- 300

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGP----DIKLDDVALASGT 352
              I G   P +G++ MD  + D+       + VGD   +FG          + A   GT
Sbjct: 301 -VSIGGRRYPNVGRVCMDQFVVDLGPDPGQAVRVGDTAVLFGTGADGGPTAAEWAETLGT 359

Query: 353 TNYDLLVRIGTRYAKF 368
            +Y+++  +  R A+ 
Sbjct: 360 IHYEVVTAVRGRAARH 375


>gi|242371567|ref|ZP_04817141.1| alanine racemase [Staphylococcus epidermidis M23864:W1]
 gi|242350719|gb|EES42320.1| alanine racemase [Staphylococcus epidermidis M23864:W1]
          Length = 382

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 92/377 (24%), Positives = 161/377 (42%), Gaps = 27/377 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L ++L A+  N+   + L  N    +V+K N+YGLG  +IA  L   G   F V +
Sbjct: 7   RPTYLNVNLDAILANYQIFDQLHHNKTVISVIKANSYGLGSVRIAQHLMEHGASFFAVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSH 122
           ++E ++LR++  +A+I +L  I            +   + S   L     +         
Sbjct: 67  LDEAIELRMHGIKAKILILGVIRTEDISKAIQHRVALTVPSKAWLKEAIKNIPEDNEKKL 126

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++DTG  RLG+  ++E  +       ++      + +H A AD+P   +N  Q E 
Sbjct: 127 WLHAKLDTGMGRLGMKDVEEYREVVDLIDKREHLVFEGVYTHFASADEPGDSMN-EQFEF 185

Query: 182 FRTLISHYKGIEASL-ASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVV 236
           F+T+++  +        +S+  LL         R GISLYG         +    ++   
Sbjct: 186 FKTVVNQVEKPTYIHTQNSAASLLMDGQFCNAIRLGISLYGYYPSQYVKDHVKVHLRPSA 245

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
              + I+ ++   AGE VSYG   K T +  IA+  IGYADGY   +             
Sbjct: 246 QLVSEIVQVKTLKAGETVSYGRTFKATEEMRIAILPIGYADGYLRAMQ------------ 293

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALASGT 352
           G    + G+   ++G++ MD T+  + +   ++VGD + +    I      + +A    T
Sbjct: 294 GAYVNVNGHQCEVVGRVCMDQTILRVPE--DVKVGDKVILMDNHIDSPQSAEALAEKQQT 351

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++L  I  R  + Y
Sbjct: 352 INYEVLCNISRRLPRIY 368


>gi|262375308|ref|ZP_06068541.1| alanine racemase [Acinetobacter lwoffii SH145]
 gi|262309562|gb|EEY90692.1| alanine racemase [Acinetobacter lwoffii SH145]
          Length = 356

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 97/360 (26%), Positives = 161/360 (44%), Gaps = 23/360 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL+ N + +  L+  A+  ++VK NAYG G +    AL       F V  ++E ++
Sbjct: 8   IDSAALQYNLNRVKQLAPTAKIVSMVKANAYGHGVKDCLAALSE--TDAFGVACLQEALE 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLM--SCGVSHPYALQ 127
           +R       I ++ G+    E  I  + N+  V+    QL +                ++
Sbjct: 66  IRELGYLQPITLIEGVFSADEMPIVIEQNIEVVVHHQAQLDWLLAHKETYIAKDLKVWVK 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG  +    D  H    +    +  +    A A+     +N  Q+ +F  + +
Sbjct: 126 LNSGMNRLGFKIDVIKDVIHTLKAEGFSCVLAMHFANADAE---HPLNDEQIRQFLEIKN 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTAEARIIL 244
               I AS  +S+ I   P  HF   RPGI LYG T   ++       + V+T  A II 
Sbjct: 183 DCAPILASCCNSAAIYKYPELHFDYVRPGIMLYGATPFADRDVHDLDLKPVMTFTAEIIA 242

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           + +  AGE V YG      ++  +A+ +IGY DGYP                     I G
Sbjct: 243 LNEIQAGEHVGYGSTFTADQNMTLAIVSIGYGDGYPRAF-----------PKQNYVAING 291

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ++G++ MDM   D+T    +++G  ++++G    +DDVA A+GT  Y+LL R+  R
Sbjct: 292 QQTRVIGRVAMDMIAIDVTGL-DVQLGTEVELWGKTRLIDDVAEANGTIGYELLCRLSNR 350


>gi|225076292|ref|ZP_03719491.1| hypothetical protein NEIFLAOT_01333 [Neisseria flavescens
           NRL30031/H210]
 gi|224952416|gb|EEG33625.1| hypothetical protein NEIFLAOT_01333 [Neisseria flavescens
           NRL30031/H210]
          Length = 352

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 154/365 (42%), Gaps = 16/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L+ N+  +  L GN +  AV+K +AYG G  + A AL +     F V +
Sbjct: 2   RPLNAQIRLDNLRQNYRFLKELHGN-KLLAVIKADAYGHGAVRCAHALADI-ADGFAVAT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+EGV+LR    +  I +L G+    E    D   +                        
Sbjct: 60  VDEGVELRQNGIKNPIVLLEGVFDAAEYADVDRYDLWPAIGSQWQLEAFVHHEWQRPTTV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G                +  +  +  SH ACAD+P + +  +QLE F  
Sbjct: 120 WLKMDSGMHRAGFFPHNYAAAYTALKQSESVENIVKFSHFACADEPENGMTEMQLEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
                +G E SLA+S+ IL  P       R G++LYG +        ++ V+   +R+  
Sbjct: 180 ACEGLEGEE-SLANSAAILNVPEARRNWGRAGLALYGISPFGGVDERLKPVMRLTSRVFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R       + YG     ++ + + + A GYADGYP   S                 + G
Sbjct: 239 ERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAS-----------TNSPVAVDG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               I+G+++MDM   ++  S    +G  ++++G  I +++V+  +    Y++L  I  R
Sbjct: 288 KRSRIIGRVSMDMITVELEASKE-GLGAEVELWGDVININEVSEVASMIPYEILCNI-KR 345

Query: 365 YAKFY 369
               Y
Sbjct: 346 AKFTY 350


>gi|196232506|ref|ZP_03131358.1| alanine racemase [Chthoniobacter flavus Ellin428]
 gi|196223268|gb|EDY17786.1| alanine racemase [Chthoniobacter flavus Ellin428]
          Length = 335

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/346 (27%), Positives = 159/346 (45%), Gaps = 22/346 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            AVVK NAYG G   +A AL     + F V +V E  +LR + P A IF+L    P +  
Sbjct: 1   MAVVKANAYGHGLGPVAKALVGH-AEMFGVATVGEAEELRSHVPDAPIFILGPALPDERL 59

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
            +     IP IS+V +   Y+  ++     P  L +DTG  R+G+   +A+       + 
Sbjct: 60  PVVTGCFIPAISTVEEARAYAA-LTGAKPLPVHLLIDTGMGRVGILQDDAVATAREILSL 118

Query: 153 KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPN 207
           +   ++ + SHL  AD+        QL +F  ++   + +        + +S+GI+  P 
Sbjct: 119 RGLTVTGLASHLPVADE-DDAFTREQLAQFHQVVGQLRSLGISQPVVHVENSAGIISYPT 177

Query: 208 YHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSL 267
               + R G+ +YG +        ++ V+T + R+ L+R+  AG  +SYG      R   
Sbjct: 178 QAGDMVRAGLMIYGSSPVPEFQPKLRAVMTWKTRVTLVREMPAGHGISYGRTFITPRPMR 237

Query: 268 IAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS 327
           IA   +GYADGY   LS   ++            I G   P+LG++TMD  + D++    
Sbjct: 238 IATLGVGYADGYQRHLSNRSAD----------VLIGGQRCPVLGRVTMDQILADVSALPQ 287

Query: 328 IEVGDYIQIF----GPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +  GD   +     G +I   ++A  SGT  +++   +G R  + Y
Sbjct: 288 VTAGDEAVLIGSQGGEEISAAELAQKSGTIPWEIFTGVGRRVERAY 333


>gi|73662116|ref|YP_300897.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
 gi|123643046|sp|Q49Z24|ALR_STAS1 RecName: Full=Alanine racemase
 gi|72494631|dbj|BAE17952.1| alanine racemase [Staphylococcus saprophyticus subsp. saprophyticus
           ATCC 15305]
          Length = 382

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 155/382 (40%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S+++ R   + +DL A+  N+     L  N     VVK N YGLG  K+A  L + G + 
Sbjct: 2   SDKYYRSTYVNVDLNAIVANFQVFQKLHPNKTVMPVVKANGYGLGSIKVARQLMDNGAEF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A+I VL  I            +   + S             S
Sbjct: 62  FAVATLDEAIELRMHGIDAKILVLGVIPTEHINKAIQHRVAITVPSKSWLVEAVKEIPES 121

Query: 118 CGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                   +++DTG  RLG+   +E  +               + +H ACAD+P   +N 
Sbjct: 122 NEKDLWIHVKLDTGMGRLGMKTAEEYKEVIELINGHSHLIFEGVFTHFACADEPGDSMNR 181

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKI----NKSHP 231
            Q   F  ++      +   + +S   L  +  F    R GISLYG         N    
Sbjct: 182 QQTM-FEEIVGQADKPDYIHSQNSAGALMKDTQFCNAVRVGISLYGYYPSAYVKSNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      + I+  +   AGE VSYG        + I V  +GYADGYP  + G      
Sbjct: 241 LKPSAQWISEIVQTKLLHAGESVSYGSVYTADEKTKIGVIPVGYADGYPRMMKGFS---- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     + G    ++GK+ MD T+  I D   I+VGD + I           + +A
Sbjct: 297 --------VNVNGKQCEVIGKVCMDQTIIKIPD--EIQVGDKVIIMDHHSDTPQSAEALA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L R+  R  + Y
Sbjct: 347 HQQQTINYEVLCRLSRRLPRVY 368


>gi|332201121|gb|EGJ15192.1| alanine racemase [Streptococcus pneumoniae GA47901]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 153/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K        ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEAPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|148994015|ref|ZP_01823371.1| alanine racemase [Streptococcus pneumoniae SP9-BS68]
 gi|168484889|ref|ZP_02709834.1| alanine racemase [Streptococcus pneumoniae CDC1873-00]
 gi|168488585|ref|ZP_02712784.1| alanine racemase [Streptococcus pneumoniae SP195]
 gi|147927482|gb|EDK78510.1| alanine racemase [Streptococcus pneumoniae SP9-BS68]
 gi|172041957|gb|EDT50003.1| alanine racemase [Streptococcus pneumoniae CDC1873-00]
 gi|183572801|gb|EDT93329.1| alanine racemase [Streptococcus pneumoniae SP195]
 gi|332072526|gb|EGI83009.1| alanine racemase [Streptococcus pneumoniae GA17570]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|55821698|ref|YP_140140.1| alanine racemase [Streptococcus thermophilus LMG 18311]
 gi|81820398|sp|Q5M2S7|ALR_STRT2 RecName: Full=Alanine racemase
 gi|55737683|gb|AAV61325.1| alanine racemase [Streptococcus thermophilus LMG 18311]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 158/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+  N   + +      +T AVVK NAYG G  ++A  +    V
Sbjct: 1   MISSLHRPTLAKVDLSAISENIEQVVSHIPKQVQTFAVVKANAYGHGAVEVAKHVSKQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  + P    +    N+   ++S+  LT   K   
Sbjct: 60  DGFCVSNLDEALELRQAGIEQPILILGVVLPDGVPLAIQENISLTVASLEWLTLAQKQGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  D            +  I +H A AD+        
Sbjct: 120 DLTGLTCHIKVDSGMGRIGVRNLKDADNLIAGLKALGADVEGIFTHFATADEADDSKFKR 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+ +       +   +S+  +      F   R G+ +YG       +   + +
Sbjct: 180 QLSFFTDLVDNLTDRPRLVHASNSATSIWHAATVFNTVRLGVVIYGLNPSGSVLELPYNI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E  +I ++   AG+ V YG     T + +I    IGYADG+   L G       
Sbjct: 240 QPALSLETALIHVKTLPAGQDVGYGATYTTTDEEVIGTLPIGYADGWTRDLQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G +    I   +VA 
Sbjct: 294 ------HVIVDGQLCPIVGRVSMDQITVRLPKVYPL--GTPVTLMGENGGVSITATEVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRVPRSY 366


>gi|34540830|ref|NP_905309.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Porphyromonas gingivalis W83]
 gi|34397144|gb|AAQ66208.1| Mur ligase domain protein/alanine racemase [Porphyromonas
           gingivalis W83]
          Length = 823

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L+A+ +N +    L     +T  +VK   YG+G  ++   L    V    V   +E
Sbjct: 465 LRINLSAIIHNLNFYRNLVPSGTKTICMVKAQGYGVGSYELVKTLQEHRVDYIAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR       I V+        + + D  L P I S   L  +S+ +     V +P  
Sbjct: 525 GKELRERGIGMPIVVMNPQRNA-FQTLIDYGLEPEIYSFALLASFSETVVRNGLVGYPVH 583

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRT 184
           +++DTG +RLG    +               +  + +HLA ADDP        QL  F  
Sbjct: 584 IKIDTGMHRLGFLPSDMTRLGEILAKDAGLSIRSVFTHLAGADDPDLDDFTRSQLLSFDA 643

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +    +        + +++G+    +YH  + R GI LYG T    +      V T  
Sbjct: 644 AFASLSSLLGYIPLRHVLNTAGVERFADYHADMIRLGIGLYGVTASGVQGLRP--VATLM 701

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I+   + + V YG + ++ + S IA+  IGYADG    LS             G+
Sbjct: 702 TTILQIKDISSSDTVGYGRKGRVQQPSRIAIIPIGYADGLDRRLSCGV----------GE 751

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G+  PI+G + MD+ M D+T     E GD + +FG ++ +++VA    T  Y++L 
Sbjct: 752 VLVRGHRCPIVGNVCMDICMIDVTGMP-AEEGDPVVVFGEELPIEEVARKMNTIPYEVLT 810

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 811 GISPRVRRVY 820


>gi|118594787|ref|ZP_01552134.1| alanine racemase [Methylophilales bacterium HTCC2181]
 gi|118440565|gb|EAV47192.1| alanine racemase [Methylophilales bacterium HTCC2181]
          Length = 358

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 157/370 (42%), Gaps = 21/370 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L+      A  +N   + + S N++  AV+K NAYG G  + A AL +     F V +
Sbjct: 2   RALKASFHSAAFSSNLKRVKSYSPNSKVMAVLKANAYGHGLIEAARALND--ADGFSVLT 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E ++LR +     + +L G     E  I     I  +    Q   Y   +        
Sbjct: 60  LSEAIELREHGFTQHLLLLEGFFKPYEVKICSLMGIGAVIHHAQQIDYINQVKPVKPIDV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V+TG NRLG   ++                 +I++H + AD       + QL  F  
Sbjct: 120 HLKVNTGMNRLGFMPKDVDLILKQLEESPYINKIVIMTHFSDADGEKG--VASQLACFNE 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEAR 241
            I      E S+A+S+ I+  P  HF+  RPGI LYG +   +K      ++ V++  + 
Sbjct: 178 -IKGIDIYERSVANSAAIIKYPETHFEWVRPGIMLYGASPFDDKTGNDFQLKPVMSLRSE 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II I+     + V YG          + + A GYADGYP                G    
Sbjct: 237 IIAIQTLEESQSVGYGSVFTAPHKMTVGIVACGYADGYPRHA-----------PSGTPLM 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +   +G+++MDM   D++   +  VG  ++++G  + +D+VA  S T  Y+LL  I
Sbjct: 286 VDGVITQTVGRVSMDMLYVDLSSLPNAGVGSSVELWGKGVLVDEVARQSHTVGYELLCAI 345

Query: 362 --GTRYAKFY 369
              +R    Y
Sbjct: 346 SASSRVPMEY 355


>gi|223933704|ref|ZP_03625679.1| alanine racemase [Streptococcus suis 89/1591]
 gi|302024422|ref|ZP_07249633.1| alanine racemase [Streptococcus suis 05HAS68]
 gi|330833424|ref|YP_004402249.1| alanine racemase [Streptococcus suis ST3]
 gi|223897620|gb|EEF64006.1| alanine racemase [Streptococcus suis 89/1591]
 gi|329307647|gb|AEB82063.1| alanine racemase [Streptococcus suis ST3]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 149/376 (39%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +++++L A+  N+   M  L       AVVK NAYG G   +A  L +     F V
Sbjct: 6   HRPTQIRVNLDAIAENFEQVMTNLPHKTEAFAVVKANAYGHGAVAVAKKLSSQ-AAGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR    +  I +L  +      +    N+   ++S+  L     L +     
Sbjct: 65  SNLDEALELRKAGIEHPILILGVVPVRFLPVAHQLNISVTVASLDWLQDAKDLEADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++DTG  R+G      L        +    +  + +H A AD+        QL  F
Sbjct: 125 TVHLKLDTGMGRIGFRKIADLLQAIAILEELEYDIEGVYTHFATADEVDQAHFEYQLSIF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +  +         +   +S+  +   +  F L R G  LYG       +     +Q  ++
Sbjct: 185 KEFLDVLPITPRWIHASNSATSIWHADTVFNLVRLGNILYGLNPSGRVLELPFDVQPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I+ +++   G  + YG          IA   IGYADG   +L GL           
Sbjct: 245 LVSEIVHVKQVETGTTIGYGATYHSADSEWIATVPIGYADGLVRSLQGLS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G    I+G+I+MD     +  +  +  G  + + G D    I + + A   GT 
Sbjct: 295 --VLVDGQACEIVGRISMDQITIRLPHAYPL--GQKVTLIGQDGDKTISVQEWADCIGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + +
Sbjct: 351 NYEVVCLLTDRLPRIF 366


>gi|294672917|ref|YP_003573533.1| alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
           alanine ligase [Prevotella ruminicola 23]
 gi|294472302|gb|ADE81691.1| alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
           alanine ligase [Prevotella ruminicola 23]
          Length = 792

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 160/371 (43%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + +    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 433 LEVNLNAVVENLNYYRSFMKPETKMVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 492

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR     A I ++        K +FD +L P + S   L    K          P  
Sbjct: 493 GVTLRKAGITANIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLDALIKAARKEGITGWPVH 551

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   + +  +      +++      + SH   +D D   + +++Q +RF 
Sbjct: 552 IKLDTGMHRLGFDPEQDMDELIDRLTHQQAVIPRSVFSHFVGSDSDDFDNFSTLQFKRFE 611

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P+    + R G+ LYG   + N+     TV T 
Sbjct: 612 MGSQKLQAAFSHKILRHIDNSAGIEHFPDRQLDMCRLGLGLYGIDSRDNRIL--HTVSTL 669

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ + +    E V Y  + KLTRDS+IA   IGYADG    L               
Sbjct: 670 KTTILQMHQVPKSETVGYSRKGKLTRDSVIAAIPIGYADGLNRRLGNRHC---------- 719

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ + D+TD    + GD ++IFG  + +  ++    T  Y++L
Sbjct: 720 YCLVNGQKAEYVGNICMDVALIDVTDIP-CQEGDQVEIFGEHLPVTVLSDVLETIPYEVL 778

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 779 TGISNRVKRVY 789


>gi|282859438|ref|ZP_06268543.1| alanine racemase [Prevotella bivia JCVIHMP010]
 gi|282587666|gb|EFB92866.1| alanine racemase [Prevotella bivia JCVIHMP010]
          Length = 826

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   +L     +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVANLNWYRSLMKPETKLVCMIKADAYGAGSVEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR     + I ++        K +FD +L P + S   L    K          P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMSS-FKTLFDFDLEPEVYSFRILDALVKAAEKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERF- 182
           +++DTG +RLG     +  +  +   ++       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPISDIDELINRLKHQNAIIPRSVFSHFVGSDSDGFDDFSAQQFALFD 645

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
               +   +    I   + +S+GI   P+    + R G+ LYG   + N+     +  T 
Sbjct: 646 AGSKKLQAAFSHKILRHIDNSAGIEHFPSRQLDMCRLGLGLYGINPRTNERINTIS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   +G+ V Y  +  +  DS+IA   IGYADG    L              G
Sbjct: 704 KTTILQLRNVPSGDTVGYSRKGTIQHDSVIAAIPIGYADGLNRHLGNRH----------G 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVGGQKAAYVGNICMDVAMIDVTGI-DCKEGDSVEIFGEHLPVTVLSDILDTIPYEIL 812

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 813 TNISNRVKRIY 823


>gi|239990088|ref|ZP_04710752.1| putative alanine racemase [Streptomyces roseosporus NRRL 11379]
          Length = 390

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 96/382 (25%), Positives = 150/382 (39%), Gaps = 31/382 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N   +   +  A+  AVVK + YG G    A A   AG       + 
Sbjct: 8   RARAEIDLAALRANVRVLRERAAGAQLMAVVKSDGYGHGAVPCARAARAAGATWLGTATP 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E + LR      RI        G  +   + ++      +  L   +            
Sbjct: 68  HEALALRAAGLDGRIMCWLWTPGGPWREAIEADIDVSAGGMWALREIAAAAEAAGRPARV 127

Query: 126 L-QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLER 181
             + DTG  R G    +  +    + + +      I    SH ACAD+P     + QL  
Sbjct: 128 QLKADTGLGRGGCQPADWPELVGAARDAERAGHLRITGLWSHFACADEPGHPSIAAQLAV 187

Query: 182 FRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           +R L++             LA+S   L  P  HF L R GI++YG +            +
Sbjct: 188 YRDLVAYAEKEGVDPEVRHLANSPATLTIPEAHFDLVRTGIAMYGISPAPELGTSAELGL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+T  A + L++ A AG  VSYG       ++ + +  +GYADG P   SG       
Sbjct: 248 RPVMTLAAAVALVKDAPAGHGVSYGHHYTTPAETTLGLIPVGYADGVPRHASGS------ 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDI-TDSLSIEVGDYIQIFGP----DIKLDDVA 347
                G   + G +  + G++ MD  + D+  D      G    +FGP    +    D A
Sbjct: 302 -----GPVLVGGKVRTVAGRVAMDQFVVDLEGDRPEA--GAEAVLFGPGDRGEPTAQDWA 354

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
            A+ T  Y+++ RIG R  + Y
Sbjct: 355 EAADTIAYEIVTRIGARVPRVY 376


>gi|168487532|ref|ZP_02712040.1| alanine racemase [Streptococcus pneumoniae CDC1087-00]
 gi|183569644|gb|EDT90172.1| alanine racemase [Streptococcus pneumoniae CDC1087-00]
          Length = 367

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   ++ I L A++ N   M           AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKVLIHLGAIRQNIQQMGTHIPQGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|62180365|ref|YP_216782.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|224583706|ref|YP_002637504.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|62127998|gb|AAX65701.1| alanine racemase 2, catabolic [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224468233|gb|ACN46063.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|322714840|gb|EFZ06411.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 356

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++    GE V YGG+  +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSVGERVGYGGRYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|152964696|ref|YP_001360480.1| alanine racemase [Kineococcus radiotolerans SRS30216]
 gi|151359213|gb|ABS02216.1| alanine racemase [Kineococcus radiotolerans SRS30216]
          Length = 415

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 90/382 (23%), Positives = 149/382 (39%), Gaps = 25/382 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+  N   +    G  +  AVVK +AYG G    A A    G     V  V
Sbjct: 8   PAEAVVDLDAIARNVAVVRERVGGPQVMAVVKADAYGHGLVPAARAALAGGATWLGVAHV 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E + LR    +A +                  +   +++V       +   +   +   
Sbjct: 68  HEALALRGAGVEADLLAWILTPGTDLVPALRRGVDVSVAAVWALEEVVAAARASATTARI 127

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L+VDTG +R G S +E                 ++    +H A AD P       QL  
Sbjct: 128 HLEVDTGMSRGGASPEEWPALLDAVAGHVADGTVRVRGTWAHFASADVPGDPSVPAQLAA 187

Query: 182 FRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPM 232
           F   +  +   G+E      A+S+  L  P   + L R G++ YG +   +        +
Sbjct: 188 FEAALGTARRHGVEPGLRHHANSAAALFVPQARYDLVRVGLAAYGLSPAPDLATGADLGL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              +T +AR+  +R+   G  VSYG      RD+ + +  +GY DG P   S        
Sbjct: 248 VPAMTLQARLAHVRRVPRGAGVSYGLTYTAERDTTLGLVPLGYGDGLPRHASWDGERS-- 305

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G+  + G    I G++ MD  + D+ D   +  G+   + GP    +   DD A 
Sbjct: 306 -----GEVLVAGARRRIAGRVCMDQVVLDLGDDA-VAPGEVAVVLGPGTRGEATADDWAR 359

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
           A+GT +++++ R+G R  + YT
Sbjct: 360 AAGTISWEIVTRVGARVPRRYT 381


>gi|3661473|gb|AAC61705.1| alanine racemase [Escherichia coli]
          Length = 356

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P      +      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGRMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGRSPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------LTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|168491420|ref|ZP_02715563.1| alanine racemase [Streptococcus pneumoniae CDC0288-04]
 gi|183574262|gb|EDT94790.1| alanine racemase [Streptococcus pneumoniae CDC0288-04]
          Length = 367

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 80/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHDVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|116628421|ref|YP_821040.1| alanine racemase [Streptococcus thermophilus LMD-9]
 gi|122266984|sp|Q03IX8|ALR_STRTD RecName: Full=Alanine racemase
 gi|116101698|gb|ABJ66844.1| alanine racemase [Streptococcus thermophilus LMD-9]
          Length = 367

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     K+DL+A+  N   + +      +T AVVK NAYG G  ++A  +    V  F V
Sbjct: 6   HRPTLAKVDLSAISENIEQVVSHIPKQVQTFAVVKANAYGHGAVEVAKHVSKQ-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR    +  I +L  + P    +    N+   ++S+  L    K     +  
Sbjct: 65  SNLDEALELRQAGIEQPILILGVVLPDGVPLAIQENISLTVASLEWLALAQKQGLDLIGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VD+G  R+G+   +  D            +  I +H A AD+        QL  F
Sbjct: 125 TCHIKVDSGMGRIGVRNLKDADNLIAGLKALGADVEGIFTHFATADEADDSKFKRQLSFF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
             L+ +       +   +S+  +      F   R G+ +YG       +   + +Q  ++
Sbjct: 185 TDLVDNLTDRPRLVHASNSATSIWHAATVFNTVRLGVVIYGLNPSGSVLELPYNIQPALS 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E  +I ++   AG+ V YG     T + +I    IGYADG+   L G            
Sbjct: 245 LETALIHVKTLPAGQDVGYGATYTTTAEEVIGTLPIGYADGWTRDLQGF----------- 293

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G + PI+G+++MD     +     +  G  + + G +    I   +VA   GT 
Sbjct: 294 -HVIVDGQLCPIVGRVSMDQITVRLPKVYPL--GTPVTLMGENGGASITATEVAEKRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  +  R  + Y
Sbjct: 351 NYEVLCLLSDRVPRSY 366


>gi|172063006|ref|YP_001810657.1| alanine racemase [Burkholderia ambifaria MC40-6]
 gi|171995523|gb|ACB66441.1| alanine racemase [Burkholderia ambifaria MC40-6]
          Length = 373

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 155/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   A+++N   +   +  +R  AV+K NAYG G E+I P L         +  
Sbjct: 3   RPIVAHVRPDAVRHNLDFIRRTAAQSRVWAVIKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPADVELADRHRLTVAVHCDEQLDVLIAAKPRQPLDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+        QLE+F  
Sbjct: 121 QLKMNSGMNRLGYRPHAFRAAWERAAAAPSIGKITLMMHFANADEGE---VDWQLEQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGIPG-ERSASNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMPAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    R   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPDETVGYGRRFTADRPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVVGRVSMDMLTVDLTPCPNAGIGSGVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTRYA 366
           +  R  
Sbjct: 346 LAHRVP 351


>gi|78211897|ref|YP_380676.1| alanine racemase [Synechococcus sp. CC9605]
 gi|78196356|gb|ABB34121.1| alanine racemase [Synechococcus sp. CC9605]
          Length = 376

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 110/381 (28%), Positives = 174/381 (45%), Gaps = 24/381 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++  +   +++   A++ N  ++   L    +  AVVK + YG G E +A A    G   
Sbjct: 5   LNPRQRAWVEVSPAAIRANARALCQHLGPRTQLMAVVKADGYGHGAETVARAALQGGATS 64

Query: 60  FFVTSVEEGVKLRLYTPQARI-FVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMS 117
             V +++EG++LR    +A +  +     P   +      L+P +SS+       +    
Sbjct: 65  LGVATLQEGLELRRAGLEAPVLLLSNLNEPDDLRTCLHWRLMPTLSSLRDAQLCNALAAD 124

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G      L++DTG  RLG SL E         + +   L  I SHLACAD+P   + S+
Sbjct: 125 SGRCFDVQLKIDTGMARLGCSLSEGHQTAAVLQSLEHLNLEGIYSHLACADEPDDALTSL 184

Query: 178 QLERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
           Q ERF +++S       GI   LA+S+G LL    H  L R G++LYG      +N   P
Sbjct: 185 QQERFVSMLSALPRGGAGITRHLANSAGTLLNRELHHDLVRVGLALYGHAPASHLNNVIP 244

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q  +   AR+ LIR  +AG  VSYG +    R + +AV  IGYADG   +LSG      
Sbjct: 245 LQPALAVRARVSLIRDVIAGTGVSYGHRFITQRPTRLAVVGIGYADGVLRSLSGHI---- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                          +P +G ITMD  + D TD+  +E GD + + G D    +   + +
Sbjct: 301 -------HALHSNRQLPQVGAITMDQLLLDATDAAGLEPGDIVTLLGQDGDLELSPQNWS 353

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
              G+  +++L     R  + 
Sbjct: 354 DHCGSIPWEILCGFKRRLPRV 374


>gi|194442850|ref|YP_002041058.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194401513|gb|ACF61735.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
          Length = 356

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A       +  +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLWAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++    GE V YGG+  +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSVGERVGYGGRYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|325681053|ref|ZP_08160585.1| alanine racemase [Ruminococcus albus 8]
 gi|324107282|gb|EGC01566.1| alanine racemase [Ruminococcus albus 8]
          Length = 374

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 96/382 (25%), Positives = 145/382 (37%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M   +    +IDL+A++ N      L         VVK   YG     I P L    G +
Sbjct: 1   MDYIKRCWAEIDLSAVEYNVTEYKKLLPAGTELMYVVKAACYGHDDSLIVPFLQEKLGAE 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V  ++E ++LR       I +L    P    +I   N+I   + +      S   + 
Sbjct: 61  YFAVADLDEAIRLRGMGISGDILILGYTLPEYAPLIAKHNVIQACTDLSYARELS--KNA 118

Query: 119 GVSHPYALQVDTGFNRLGLS--LQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSH 173
             +      VDTG  R+G+    +E               L  I +H + AD        
Sbjct: 119 EGTVRVHGAVDTGMTRIGVHGTAEEQAAELSEIAATPNIALEGIFTHFSSADGTAQADDD 178

Query: 174 VNSVQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
             ++Q ERF  +         +   A + +S+G   G      L R GI +YG      K
Sbjct: 179 YTNMQAERFFRVRDLLTAGGIELKHAHIKNSAGGAYGFGEGSTLARLGIIMYGLYPDPAK 238

Query: 229 SHPMQTV--VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             P +    +T +A +  ++   AG  VSYG      R   +A    GYADGYP  LS  
Sbjct: 239 PLPFEPKPVMTWKAVVSQVKWIDAGTAVSYGRTFVSDRRMKLATITAGYADGYPRALSN- 297

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                      G+  I G    I G++ MD  M D+TD   I  GD   +   ++  D +
Sbjct: 298 ----------KGEVIIGGKRCRICGRVCMDQFMCDVTDLPDIRSGDEAILMDAEMNADHL 347

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  +GT  Y++   I  R  + 
Sbjct: 348 AALTGTIGYEITCGISPRVPRV 369


>gi|16129153|ref|NP_415708.1| alanine racemase 2, PLP-binding [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108035|ref|AP_001815.1| alanine racemase 2, PLP-binding [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080818|ref|YP_001730138.1| alanine racemase 2, PLP-binding [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238900421|ref|YP_002926217.1| alanine racemase 2, PLP-binding [Escherichia coli BW2952]
 gi|256023134|ref|ZP_05436999.1| alanine racemase [Escherichia sp. 4_1_40B]
 gi|300951652|ref|ZP_07165476.1| alanine racemase [Escherichia coli MS 116-1]
 gi|300955586|ref|ZP_07167944.1| alanine racemase [Escherichia coli MS 175-1]
 gi|301029512|ref|ZP_07192593.1| alanine racemase [Escherichia coli MS 196-1]
 gi|2506172|sp|P29012|ALR2_ECOLI RecName: Full=Alanine racemase, catabolic
 gi|1651592|dbj|BAA36045.1| alanine racemase 2, PLP-binding [Escherichia coli str. K12 substr.
           W3110]
 gi|1787439|gb|AAC74274.1| alanine racemase 2, PLP-binding [Escherichia coli str. K-12 substr.
           MG1655]
 gi|169888653|gb|ACB02360.1| alanine racemase 2, PLP-binding [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238859950|gb|ACR61948.1| alanine racemase 2, PLP-binding [Escherichia coli BW2952]
 gi|260449676|gb|ACX40098.1| alanine racemase [Escherichia coli DH1]
 gi|299877620|gb|EFI85831.1| alanine racemase [Escherichia coli MS 196-1]
 gi|300317515|gb|EFJ67299.1| alanine racemase [Escherichia coli MS 175-1]
 gi|300449098|gb|EFK12718.1| alanine racemase [Escherichia coli MS 116-1]
 gi|309701490|emb|CBJ00797.1| alanine racemase, catabolic [Escherichia coli ETEC H10407]
 gi|315135826|dbj|BAJ42985.1| alanine racemase [Escherichia coli DH1]
 gi|323937908|gb|EGB34172.1| alanine racemase [Escherichia coli E1520]
 gi|323942468|gb|EGB38636.1| alanine racemase [Escherichia coli E482]
 gi|332342769|gb|AEE56103.1| alanine racemase [Escherichia coli UMNK88]
          Length = 356

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|315501356|ref|YP_004080243.1| alanine racemase [Micromonospora sp. L5]
 gi|315407975|gb|ADU06092.1| alanine racemase [Micromonospora sp. L5]
          Length = 372

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 159/375 (42%), Gaps = 27/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +++DL A++ N   + A + +A   AVVK + YG G    A A  +AG     V +++E 
Sbjct: 6   VRVDLDAIRENVTRLKAGT-SAELMAVVKGDGYGHGMVPAARAALDAGADQLGVCTLDEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           ++LR     A +                  +    + + Q                  L+
Sbjct: 65  LRLREEGITAPVLAWLLSPGLPLHDGITVGVDLGCAGLTQLDEMIQASRRADRPARLHLK 124

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +DTG  R G ++ +       +   +   L ++  + SH   AD P       QL  F+ 
Sbjct: 125 IDTGLARGGATVADWPALLEAAAKAQADGLVEVVGVWSHFVYADSPGHPTTDRQLAVFQE 184

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            +     +  +     LA+S+  L  P+ HF L RPGI++YG +    +   ++  +TA 
Sbjct: 185 GLEMVTRAGLRPRYRHLANSAATLTRPDTHFDLVRPGIAVYGLSPVAGEQFGLRPAMTAR 244

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           AR++L ++  AG  VSYG      +++ +AV  +GYADG P   S             G 
Sbjct: 245 ARVMLTKRVAAGTGVSYGHTYLTEQEANLAVVPLGYADGVPRHASNT-----------GP 293

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNY 355
             + G    I G++ MD  + D  D   +  GD   +FG     +   DD A A GT NY
Sbjct: 294 VQLAGKRRTISGRVCMDQFVVDCGDD-EVADGDVATLFGSGADGEPTADDWAEAVGTINY 352

Query: 356 DLLVRIGT-RYAKFY 369
           +++ R G  R  + Y
Sbjct: 353 EIVTRFGGVRVPRVY 367


>gi|255326888|ref|ZP_05367964.1| alanine racemase [Rothia mucilaginosa ATCC 25296]
 gi|255296105|gb|EET75446.1| alanine racemase [Rothia mucilaginosa ATCC 25296]
          Length = 437

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 88/391 (22%), Positives = 161/391 (41%), Gaps = 30/391 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL AL++N   +  L G+    AV+K +AYG G   +A +   AG     V  V E 
Sbjct: 25  ATIDLDALEHNVRRLKELIGDRALIAVIKADAYGHGAYPVARSAIAAGADLLGVVHVNEA 84

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR    +A +                  +   +S        +     G      L+ 
Sbjct: 85  LELRADGIEAPLMAWLHTPSTDFDAALQEKIHLGVSGWDLEAVAAAAERTGERAIVHLKA 144

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G +  +       +   +   L  +  I SHLA AD+P+    + QL+   T 
Sbjct: 145 DTGLGRNGATAADWPALVARAACLEESGLITVEGIFSHLAVADEPTRAETAQQLDTLDTF 204

Query: 186 ISHYK--GIEASLASSSG-------ILLGPNYH----FQLTRPGISLYGGTDKIN---KS 229
           ++  +  G++  +   +         L G +          R G++LYG +       + 
Sbjct: 205 VAQAREAGLDPKIVHLANSPATLTASLEGWDTEERLLGDGVRCGLALYGLSPLPEVTAED 264

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T  + I  +++  AG+ VSYG +    + + +A+  +GYADG P         
Sbjct: 265 LGLKPVMTVGSYIAAVKEVPAGQGVSYGLRYHTPKATTLALVPLGYADGVPRIAENAPVR 324

Query: 290 HSPSVFLGGKGFI----KGYMVPILGKITMDMTMFDITD----SLSIE-VGDYIQIF--G 338
             P       G +    +G    ++G+I MD  + D+ +      ++  +G    +F  G
Sbjct: 325 IYPGAQNAEDGSVPNNTEGKTYRVVGRIAMDQMVVDLGEPGLSDPALGYLGAPAILFGAG 384

Query: 339 PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +  +++ A A+ T NY+++ RI +R  + Y
Sbjct: 385 ENPPVEEWADAAQTINYEIVTRISSRVERLY 415


>gi|227894495|ref|ZP_04012300.1| alanine racemase [Lactobacillus ultunensis DSM 16047]
 gi|227863654|gb|EEJ71075.1| alanine racemase [Lactobacillus ultunensis DSM 16047]
          Length = 376

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 144/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N  + +  L+   +  AVVK NAYG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIRRNLENEIKHLAPGQKMLAVVKANAYGHGAVEVAKVATEVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    ++   + ++  L    K      + 
Sbjct: 66  AILDEALQLRRADIVKPILVLGVVSPEYAPIAAVNDVSLTVPNLEWLKEAEKYLAKENLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G S  E     +             + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFSEDEDFIAANKFLENNDHFFVEGMFAHFASADSADETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV--- 235
           +F  + S        +   +++  +        L R GI +YG     N   P       
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHEGIKSDLVRFGIGIYGLNPSSNPDSPDLNPAFK 245

Query: 236 ----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHKGDGVGYGSTFVADKDTIIGTVPVGYADGWIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVA 347
                  K  +     PI+G+I MD  M  + + + +  G  + I   +      +   A
Sbjct: 301 -------KVKVGDKYCPIVGRICMDQFMVKLPEKMPV--GTKVVIISNNPADPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +G R  + Y
Sbjct: 352 DYVDTIHYEVACLLGDRLPRVY 373


>gi|332882707|ref|ZP_08450318.1| alanine racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332679209|gb|EGJ52195.1| alanine racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 369

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 153/378 (40%), Gaps = 21/378 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M + E + L+IDLTAL+ N   +   L       AVVK ++YG    +IA  +       
Sbjct: 1   MKTEETV-LEIDLTALERNIQYLKSRLKPTTWFLAVVKASSYGNEATQIAAYIEKKKLAN 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V    EG+ LR       I VL+      + II       + S      F       
Sbjct: 60  YFAVAYTSEGIALRKRGISLPIIVLHPQSINFDDIIKYQLEPTLYSLRTAHLFLEYAEKH 119

Query: 119 GVS-HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNS 176
            +S +P  L+ +TG NRLG    +  +      N    ++    SHLA ++D +      
Sbjct: 120 QLSDYPVHLKCNTGLNRLGFDFNQIDEVLSLLKNNATVKVKTAYSHLAASEDMNEKVFTE 179

Query: 177 VQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q++RF              +     ++SGIL  P   F + R GI +YG  +       
Sbjct: 180 NQIQRFIAFQEKVNQTFAHKVIYHQCNTSGILNYPEAQFDMVRSGIGMYGFANDAALQPY 239

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +  +++ ++ I  I +   G+ + Y         +  A   +G+ADG             
Sbjct: 240 LTPIMSLKSVISQIHRLEIGDSLGYNRGYIADHITKTATIPVGHADGINRIYG------- 292

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G  FI G   PILG + MDM M DIT     E GD + +F  D   + +A ++G
Sbjct: 293 ---KGKGFVFIHGKKAPILGNVCMDMIMVDITHI-DCEEGDEVIVFDKDHTAETLAESAG 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+L+  +  R  + Y
Sbjct: 349 TISYELMTSMAHRIKRLY 366


>gi|330821390|ref|YP_004350252.1| Alanine racemase [Burkholderia gladioli BSR3]
 gi|327373385|gb|AEA64740.1| Alanine racemase [Burkholderia gladioli BSR3]
          Length = 375

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 21/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +I   A+++N   +   + ++R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPILAQIRPAAVRHNLAVIRRRAASSRVWAVVKANAYGHGIERIYPGLAE--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L G+    +  I D   + V    P+                
Sbjct: 61  LDEAVRVRELGWTRPVLLLEGLFEAADVAIADRYRLSVAVHTPEQLDMLAAARPTRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG       +    +          ++ H A AD+  +     Q++ F  
Sbjct: 121 QLKMNSGMNRLGFRPDVYREAWQRASTTPAVGRIALMMHFANADEGQA---DWQMQVFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEA 240
                 G E +L++S+G+L  P  H    RPG  LYG +     +      +   +T  +
Sbjct: 178 ATQGLPG-ERTLSNSAGVLWHPAAHRDWVRPGTILYGASPTGVARDIADTGLLPAMTLSS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I I+   A E V YG +   +    + V A GYADGYP                G   
Sbjct: 237 RLIGIQTIEANETVGYGRRFAASSAMRVGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T   +  +G  ++++G  + +D+VA A+ T  Y+L+  
Sbjct: 286 VVDGVRTRVVGRVSMDMLTVDLTPCPNARIGSPVELWGSQVHVDEVAEAASTIGYELICA 345

Query: 361 IGTRYA 366
           I  R  
Sbjct: 346 IARRVP 351


>gi|87124994|ref|ZP_01080841.1| putative Alanine racemase [Synechococcus sp. RS9917]
 gi|86167314|gb|EAQ68574.1| putative Alanine racemase [Synechococcus sp. RS9917]
          Length = 390

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 104/379 (27%), Positives = 161/379 (42%), Gaps = 26/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   L++   A+ +N  S+ +L        AVVK + YG G   +A A    G     V
Sbjct: 20  RQRAWLEVAPAAISHNARSIRSLLRPGCALMAVVKADGYGHGAVTVARAALAGGATQLGV 79

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--SCGV 120
            +++EG++LR    +  + V+  +    +        +    S  +     + +    G 
Sbjct: 80  ATLQEGIELRQAGLREPVLVMGNLTQADDLRRCLHWQLMPTLSGMREALLCQNLASDSGR 139

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS----HVNS 176
                L++DTG  RLG   QEA             +L  I SHLA AD   +     V  
Sbjct: 140 RFDVQLKLDTGMTRLGCDWQEAPRLVDAIQQLDRIRLEGIYSHLALADGDPNGDGERVTQ 199

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-- 232
            Q +RFR  +           LA+S+G L  P  H  L R G++LYG +   +  H +  
Sbjct: 200 QQHQRFREALRLLPEGDAVHHLANSAGTLRDPELHHDLVRVGLALYGHSPSPHLDHAVAL 259

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T  AR+ LIR+  AG  VSYG +    R S +AV AIGYADG    LSG       
Sbjct: 260 EPAMTVRARVSLIRQVGAGVGVSYGHRFITARPSRLAVVAIGYADGVSRALSGRIC---- 315

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                     +G  +P +G ITMD  + D+TD  ++E G  + + G D    I   D + 
Sbjct: 316 -------ALHQGRRLPQVGAITMDQLILDVTDHPNLEPGAVVTLLGRDGDLTIHPRDWSD 368

Query: 349 ASGTTNYDLLVRIGTRYAK 367
              +  +++L     R  +
Sbjct: 369 QCDSIPWEVLCGFKHRLPR 387


>gi|168241390|ref|ZP_02666322.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168462709|ref|ZP_02696640.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194451208|ref|YP_002045847.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194409512|gb|ACF69731.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|195633999|gb|EDX52351.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|205339703|gb|EDZ26467.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 356

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIAEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLNAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|145704|gb|AAC36881.1| catabolic alanine racemase [Escherichia coli]
          Length = 356

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  A+   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAI---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P      +      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGRMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGRSPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------LTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAVRVP 352


>gi|158317753|ref|YP_001510261.1| alanine racemase [Frankia sp. EAN1pec]
 gi|158113158|gb|ABW15355.1| alanine racemase [Frankia sp. EAN1pec]
          Length = 380

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 166/376 (44%), Gaps = 29/376 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L A++++  ++ A +G A T AVVK + YG G    A A  +AG        +EE + 
Sbjct: 16  IELDAVRDSVAALVARAGAAATMAVVKADGYGHGMLPCARAALDAGASWLGTAFLEEALA 75

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQVD 129
           LR       +         +       ++    S+        +   + G +    L++D
Sbjct: 76  LRAAGITVPVLSWLAAPGERLAAGIAADVDLSASAGWALDDLAAAARTAGRAARVHLKID 135

Query: 130 TGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERF--RT 184
           TG  R G + ++      ++   +   L ++  + SH A AD P       Q+ RF    
Sbjct: 136 TGLGRAGATGEDWPGLCDSAAALEADGLIEVVGVWSHFAFADAPGHPTVQAQISRFGDAV 195

Query: 185 LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----QTVVT 237
            ++   G+      LA+S+  L+ P  HF + RPG+S+YG +       P     +  +T
Sbjct: 196 DVARKAGLRPQVRHLANSAATLVSPEAHFDMVRPGVSVYGLSPGPEVGPPSAFGLRPAMT 255

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A I L+++  AG  VSY  + + + ++ +AV  +GYADG P + +             
Sbjct: 256 LRASIALVKRVPAGTGVSYAHRYRTSAETGLAVVPLGYADGIPRSATNT----------- 304

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
            +  + G    I G + MD  + D+     + VGD + +FGP    +   DD A A GT 
Sbjct: 305 AEVLVGGRRRRIAGTVCMDQFVMDVGADP-VRVGDEVILFGPGDRGEPTADDWARALGTI 363

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++ RIG R  + Y
Sbjct: 364 NYEIVTRIGPRVPRVY 379


>gi|254449940|ref|ZP_05063377.1| alanine racemase [Octadecabacter antarcticus 238]
 gi|198264346|gb|EDY88616.1| alanine racemase [Octadecabacter antarcticus 238]
          Length = 345

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 127/363 (34%), Positives = 186/363 (51%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL AL  NW S++A++ +  T AVVK + YGLG  K+  AL  AGV+ FFV   EEG
Sbjct: 6   LSVDLDALTANWRSLDAMT-DVETCAVVKADGYGLGVAKVGRALMKAGVKRFFVAVPEEG 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR    P   I +  G   G   +I D  L P+I+++ Q    ++ +     HP+ +Q
Sbjct: 65  AILRHAVGPNVEICIFAGHMRGDTDMIADMMLTPMINTIGQ---LTRHLEALPDHPFGVQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL + E       +  +      L++SHLACAD P   +N  QL++F  +  
Sbjct: 122 LDTGMNRLGLEIDEWASIAEIALTQ---NCRLVMSHLACADTPDHPMNRKQLDQFHLMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILLGP YHF +TRPGI LYGG    +        +     +I +R 
Sbjct: 179 G-INVPRSLAATGGILLGPEYHFDMTRPGIGLYGGAPFADALPVAYLDL----PVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y       R S IA  + GYADG    LS            G   +     V
Sbjct: 234 VEIGETVGYANAWTAQRPSKIATLSGGYADGLTRALS-----------AGANLWHGAQPV 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+++MD+   D+TD   +  G  + + G D  +D++A  +GT  Y++L  +G RY +
Sbjct: 283 PLVGRVSMDLITADVTDLPEL-PG-VLSVLGLDQTVDELAARAGTIGYEILTSLGPRYER 340

Query: 368 FYT 370
            Y+
Sbjct: 341 RYS 343


>gi|301794676|emb|CBW37127.1| alanine racemase [Streptococcus pneumoniae INV104]
          Length = 367

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       +   + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLALPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ I+   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHIKTVPAGACMGYGATYQTDSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|194337539|ref|YP_002019333.1| alanine racemase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310016|gb|ACF44716.1| alanine racemase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 365

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/377 (26%), Positives = 157/377 (41%), Gaps = 26/377 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                + L  L  N   +    G  AR   +VK NAYG    ++A  L  +GV+DF V +
Sbjct: 1   MTEALVSLDNLAWNTSLIRKRVGGSARIMGIVKANAYGHNVHRVAETLEKSGVRDFGVAN 60

Query: 65  VEEGVKLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPV-ISSVPQLTFYSKLMSCGV 120
           + E ++L+        A I       P         ++      S+   +      +   
Sbjct: 61  IHEAIELKTGGALKKPANILAFSSPLPSHIPFFLHHDIEMTLCDSLTLQSAEEIAAAENK 120

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    L+VDTG  RLG     A++      +    +L  I +H   AD  ++   + QL+
Sbjct: 121 TIAVQLKVDTGMGRLGTPPAVAMELLRQIDHSPHLELKGIYTHF--ADSSTAEGTTKQLD 178

Query: 181 RFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQ 233
            F+TL + Y+      +    A+S  IL  P     + RPGI LYG     N      ++
Sbjct: 179 AFKTLTAEYEHASSKTVCKHAANSGAILSAPESWLDMVRPGILLYGYHPTKNSPCRLDVR 238

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  EA++I ++K  AG  +SY           IA  A GYADGY   LSG  +     
Sbjct: 239 PVMQFEAKVIFVKKVPAGTTISYNRTWTANEPRSIATIAAGYADGYTRALSGRAT----- 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGT 352
                   I G   P +G +TMD  M D+     ++ GD   +FG   I  D +A  +GT
Sbjct: 294 ------VMINGNTYPQVGIVTMDQIMVDLGTRHDVKTGDTATLFGWEGIGADSLAGLAGT 347

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y++L  +  R  + +
Sbjct: 348 ISYEMLCSVSARVKRIF 364


>gi|161613692|ref|YP_001587657.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168820548|ref|ZP_02832548.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|161363056|gb|ABX66824.1| hypothetical protein SPAB_01417 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205342561|gb|EDZ29325.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320085692|emb|CBY95470.1| alanine racemase 2, catabolic [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 356

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|317485550|ref|ZP_07944427.1| alanine racemase [Bilophila wadsworthia 3_1_6]
 gi|316923230|gb|EFV44439.1| alanine racemase [Bilophila wadsworthia 3_1_6]
          Length = 384

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 168/378 (44%), Gaps = 32/378 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + + L  L++N  ++  L+ +     V+K +AYG G   +A  L   G+Q   V SV EG
Sbjct: 8   ITVHLENLRHNLKTL--LARHPSLMPVIKADAYGHGVVAVARVLAEEGIQHMAVGSVGEG 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI----PVISSVPQLTFYSKLMSCGVSHPY 124
             LR     A +  L G+   ++  +  +  I        S+ ++   S L         
Sbjct: 66  ALLRQEGHTAFLLALMGLARDEDTALAASYDITPLVHSRESLERILAQSHLTGRAKPLTV 125

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFR 183
           A++ DTG +RLG  + EA +        K  +  L++SHLA +D P+       Q  RF 
Sbjct: 126 AIKFDTGMSRLGFRVDEAAELADYLRTLKEVRPVLVMSHLAASDTPALDDFTHEQARRFH 185

Query: 184 TLISHY----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQT 234
                      G++ SL +S G+L  P+Y   L RPG++LYGG              +  
Sbjct: 186 EATESMKAVFPGLKTSLTNSPGLLCWPSYVGDLARPGVTLYGGNPLHGTDRAKLGMGLLP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+   A ++ +   + G  VSYG      +D   AV   GYADGYP +LS          
Sbjct: 246 VMEMAAPVLSVHPVVKGATVSYGCLYTAPKDIRAAVVGAGYADGYPRSLSMR-------- 297

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I+G   PILG++ M M + D+TD   +E GD   + G      I+ +++A   
Sbjct: 298 ---GSVLIRGQRAPILGRVCMQMCIVDVTDIPGVEPGDTAYLLGGSGPLAIRPEELAEWW 354

Query: 351 GTTNYDLLVRIGTRYAKF 368
           GT +Y++   +G R  + 
Sbjct: 355 GTISYEVFCALG-RNRRV 371


>gi|207856691|ref|YP_002243342.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|206708494|emb|CAR32815.1| Alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
          Length = 356

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLNAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|317124143|ref|YP_004098255.1| alanine racemase [Intrasporangium calvum DSM 43043]
 gi|315588231|gb|ADU47528.1| alanine racemase [Intrasporangium calvum DSM 43043]
          Length = 387

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 90/378 (23%), Positives = 155/378 (41%), Gaps = 25/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +  +IDL A ++N  ++ A + +++  AVVK + YG G   +A A   AG     V    
Sbjct: 12  VWAEIDLDAFEDNVRTLRARAPHSQLMAVVKADGYGHGLLPVARAAVRAGADWLGVAQPT 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   LR      RI     +           ++    S+   L   +      G S    
Sbjct: 72  EAFALRDAGVTTRILTWLSVPGTDFAGAVRRDIDVSASAPWTLDAIAGAARSEGRSARVH 131

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKL---GQLSLIISHLACADDPSSHVNSVQLERF 182
           L+VDTG  R G    +      ++   +      +  I +H A AD P       Q + F
Sbjct: 132 LKVDTGLGRGGAFGTDWPTLVEHARRLESEGAISVVGIWTHFAMADAPEHPTVLAQQDTF 191

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
              +     +  +     LA+S+  L+ P  H  L RPGI++YG +          ++ V
Sbjct: 192 FEAVATAERAGVRPEVRHLANSAATLVHPAAHADLVRPGIAMYGLSPVPEVADDFGLRPV 251

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  AR+ L+++  AG  +SYG       D+++ +   GYADG P + + +         
Sbjct: 252 MTLRARLALVKRWPAGRGISYGHVYAPEVDTVVGLVPAGYADGVPRSATNV--------- 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG---PDIKLDDVALASGT 352
                 +      I G++ MD  + D+    +   GD + +FG         D A A+ T
Sbjct: 303 --APVQVGARRTTIAGRVCMDQFVVDLGPDSAAAAGDVVTLFGKPSEGPTAQDWADATET 360

Query: 353 TNYDLLVRIGTRYAKFYT 370
            +Y+++ RIG R  + ++
Sbjct: 361 ISYEIVTRIGARVPRLWS 378


>gi|229829044|ref|ZP_04455113.1| hypothetical protein GCWU000342_01129 [Shuttleworthia satelles DSM
           14600]
 gi|229792207|gb|EEP28321.1| hypothetical protein GCWU000342_01129 [Shuttleworthia satelles DSM
           14600]
          Length = 387

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 170/382 (44%), Gaps = 27/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFF 61
           ++ + + IDL A++ N  +M + +  + R  AVVK +AYG G  +IA  L  +  V  + 
Sbjct: 3   HKRVWMDIDLDAVRANVDAMFDRMRPDCRMMAVVKADAYGHGAREIAALLEPDQRVFGYA 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
           V +V+E  +LR +     I +L    P +   +    + P I S      + +     G+
Sbjct: 63  VATVDEAYELRRHQISKPILILGYSFPEEYPAMVRLGIRPAIFSYESALAFDRAASQAGM 122

Query: 121 SHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
             P  +++DTG +R+G  + +E L         K  ++  I +H A AD+        Q 
Sbjct: 123 IAPVHIKIDTGMSRIGFQVDEEDLSQAARIAQLKHLRMEGIFTHFARADEKDKSHAYAQA 182

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPM 232
           + F+  I   +           ++S+ I+  P  +  + R GISLYG           P+
Sbjct: 183 DLFQQAIDRLERAGVEFEIRHCSNSASIMELPELNMDMVRAGISLYGLWPSEEMDPNFPL 242

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++  + I  I+    G  +SYGG  ++   + IA   +GYADGY   LS        
Sbjct: 243 SAAMSLGSHITHIKTLGEGRCISYGGTYQVKGKAKIATIPVGYADGYARGLSNR------ 296

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                G   I+G   PI+G+I MD  M D++    I VG+ + + G D    I L+++  
Sbjct: 297 -----GYVLIQGKRAPIVGRICMDQFMVDVSAFDHIAVGEKVTLLGEDGKERISLEELGR 351

Query: 349 ASGTTNYDLLVRIG-TRYAKFY 369
            SG  NY+    +G  R  K +
Sbjct: 352 LSGRFNYEFACLLGNRRIPKVF 373


>gi|222054518|ref|YP_002536880.1| alanine racemase [Geobacter sp. FRC-32]
 gi|221563807|gb|ACM19779.1| alanine racemase [Geobacter sp. FRC-32]
          Length = 351

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 155/358 (43%), Gaps = 27/358 (7%)

Query: 28  GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH 87
                 AVVK +AYG G   I+  L + GV  F V  + EG++LR       I +L GI+
Sbjct: 4   PGCGLLAVVKADAYGHGFMDISLELESLGVTAFGVAFLAEGIQLRKSGIDRPILILGGIY 63

Query: 88  PGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
           PGQEK     N+   + S+ Q                  L+VDTG  RLG+++ EA  F 
Sbjct: 64  PGQEKKCVGFNISTAVFSLEQAKALDETARKLYRKAKVHLKVDTGMGRLGVTIAEAGAFL 123

Query: 147 HNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLISHYKGI-----EASLAS 198
                 K  +L  I SH A AD+     +   + Q E F  ++   K +        +A+
Sbjct: 124 RELRGLKNIELEGIFSHFASADELDESGNRYTAQQAEIFALVLQDAKKVGFSPTYVHIAN 183

Query: 199 SSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVVTAEARIILIRKALAGELVSY 256
           S+           L RPGI LYG     +      ++ V+  ++R+ +++       +SY
Sbjct: 184 SAAAFSRDLPFCNLMRPGIVLYGALPSADFKGKIDVKPVMRLKSRVAMLKWVEQDTSISY 243

Query: 257 GGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMD 316
             +      +L+A   +GYADGY   L+             G+  I+G    + G + MD
Sbjct: 244 ARRYVSQGKTLVASVPVGYADGYDRGLTN-----------KGEALIRGQRARVAGTVCMD 292

Query: 317 MTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             M D+T    ++VGD + + G D     I  +++A  +GT  Y++   I  R  + Y
Sbjct: 293 WIMLDVTHIPGVQVGDEVTLLGCDGQGNCIHAEELAELAGTIPYEIFCGISKRVPRVY 350


>gi|282880769|ref|ZP_06289465.1| alanine racemase [Prevotella timonensis CRIS 5C-B1]
 gi|281305303|gb|EFA97367.1| alanine racemase [Prevotella timonensis CRIS 5C-B1]
          Length = 824

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 156/371 (42%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   +L  +  +   ++K +AYG G  ++A  L +  V    V   +E
Sbjct: 465 LEVNLNAIVDNLNYYRSLLKHGTKLVCMIKADAYGAGAVEVAKTLQDHRVDYLAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR     A I V+        K++FD +L P + S   L    K         +P  
Sbjct: 525 GVTLRKNGITANIMVMNPEMSS-FKMLFDYDLEPEVYSFRLLDALVKAAEKEGITDYPVH 583

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPSSHVNSVQLERFR 183
           +++DTG +RLG   Q+ +    +   ++   +   +         D     ++ Q   F 
Sbjct: 584 IKLDTGMHRLGFDPQKDMQTLISRLKRQNAIIPRSVFSHFVGSDSDDFDSFSAQQFALFD 643

Query: 184 T-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +    I   + +S+GI   P     + R G+ LYG   + N+   +  V T 
Sbjct: 644 EGSKLLQAAFTHKIIRHMDNSAGIEHFPERQLDMCRLGLGLYGINPRTNQ--VIHQVSTL 701

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
              I+  R+  AG+ V Y  +  +  DS+IA   IGYADG    L              G
Sbjct: 702 RTTILQKREVKAGDTVGYSRKGTIAHDSVIAAIPIGYADGLNRRLGNRH----------G 751

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G   P +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 752 YCLVNGQRAPYVGNICMDVAMIDVTGI-DCKEGDRVEIFGEHLPVTVLSDILETIPYEVL 810

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 811 TSVSNRVKRVY 821


>gi|238912133|ref|ZP_04655970.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 356

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---CSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|325270857|ref|ZP_08137445.1| Mur ligase domain protein/alanine racemase [Prevotella multiformis
           DSM 16608]
 gi|324986812|gb|EGC18807.1| Mur ligase domain protein/alanine racemase [Prevotella multiformis
           DSM 16608]
          Length = 826

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFLKPETKLVCMIKADAYGAGAAEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR     + I ++        K +FD +L P +     L     +         P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMSS-FKTLFDYDLEPEVYCFRLLDALVKAAQKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   Q +  +      ++       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPQKDMDELISRLKHQNAIIPRSVFSHFVGSDADSFDDFSARQFALFE 645

Query: 184 T-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +    I   + +S+GI   P     + R G+ LYG   + NK     +  T 
Sbjct: 646 EGSGKLQSAFKHKIIRHMDNSAGIEHFPERQMDMCRLGLGLYGINPRTNKIINNVS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  +  DSLIA   IGYADG    L               
Sbjct: 704 KTTILQLRHVPAGDTVGYSRKGTVEHDSLIAAIPIGYADGLNRHLGNRHC---------- 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVNGKKAAYVGNICMDVAMVDVTGI-DCKEGDSVEIFGDHLPVTVLSDVLDTIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 813 TTVSNRVKRVY 823


>gi|114704797|ref|ZP_01437705.1| alanine racemase [Fulvimarina pelagi HTCC2506]
 gi|114539582|gb|EAU42702.1| alanine racemase [Fulvimarina pelagi HTCC2506]
          Length = 396

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 137/371 (36%), Positives = 205/371 (55%), Gaps = 10/371 (2%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R++ID  ALK NW ++ ++  NA+T A VK + YGLG  +++ AL+ AG ++FFV  
Sbjct: 26  RLPRVEIDRGALKRNWAALASIHPNAQTGAAVKADGYGLGAVEVSRALFEAGCRNFFVAW 85

Query: 65  VEEGVKLRLY----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
            EEG  +R         AR+FVL G+ P   + + D +L+PV+SS   LT +   L +  
Sbjct: 86  PEEGQIVRSALAPKNKNARVFVLQGMEPAAVRFLTDHDLVPVLSSPDDLTIWTEGLTALA 145

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              P ALQ++TG NRLGL  +  L            +++L+++HLA AD      +  Q 
Sbjct: 146 RRAPAALQLETGMNRLGLD-ERGLGKAMALVEAGELEVALLLTHLASADVSPED-SEAQR 203

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            RF  + + +  I  SLA+S+G++ G ++   LTRPGI+LYGG   +      + V    
Sbjct: 204 IRFSAMSARFPYISRSLANSAGLVCGESFGLDLTRPGIALYGGMGCLGGLIATEPVARLS 263

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A +I +R+  AGE V Y G  +LTR ++IA   IGY DGY   LSG              
Sbjct: 264 AAVIQVREVEAGEKVGYAGAARLTRRTIIATLGIGYGDGYLRALSGAGVPLRMDRPAASA 323

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
             I G  VP+LG+I+MD+T+ D+TD    S+  GD  ++FGP++ +D VA A+GT  Y+L
Sbjct: 324 V-ISGCAVPVLGRISMDLTLLDVTDLPAGSVRPGDRAELFGPNMPIDKVAEAAGTIPYEL 382

Query: 358 LVRIGTRYAKF 368
           L  +G R  + 
Sbjct: 383 LTGLGPRVQRV 393


>gi|55823619|ref|YP_142060.1| alanine racemase [Streptococcus thermophilus CNRZ1066]
 gi|81820232|sp|Q5LY71|ALR_STRT1 RecName: Full=Alanine racemase
 gi|55739604|gb|AAV63245.1| alanine racemase [Streptococcus thermophilus CNRZ1066]
 gi|312279040|gb|ADQ63697.1| Alanine racemase [Streptococcus thermophilus ND03]
          Length = 367

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 157/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+  N   + +      +T AVVK NAYG G  ++A  +    V
Sbjct: 1   MISSLHRPTLAKVDLSAISENIEQVVSHIPKQVQTFAVVKANAYGHGAVEVAKHVSKQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  + P    +    N+   ++S+  L    K   
Sbjct: 60  DGFCVSNLDEALELRQAGIEQPILILGVVLPDGVPLAIQENISLTVASLEWLALAQKQGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  D            +  I +H A AD+        
Sbjct: 120 DLTGLTCHIKVDSGMGRIGVRNLKDADNLIAGLKALGADVEGIFTHFATADEADDSKFKR 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+ +       +   +S+  +      F   R G+ +YG       +   + +
Sbjct: 180 QLSFFTDLVDNLTARPRLVHASNSATSIWHATTVFNTVRLGVVIYGLNPSGSVLELPYNI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ E  +I ++   AG+ V YG     T + +I    IGYADG+   L G       
Sbjct: 240 QPALSLETALIHVKTLPAGQEVGYGATYTTTAEEVIGTLPIGYADGWTRDLQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G + PI+G+++MD     +     +  G  + + G +    I   +VA 
Sbjct: 294 ------HVIVDGQLCPIVGRVSMDQITVRLPKVYPL--GTPVTLMGENGGASITATEVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRVPRSY 366


>gi|325859574|ref|ZP_08172707.1| alanine racemase [Prevotella denticola CRIS 18C-A]
 gi|327314494|ref|YP_004329931.1| alanine racemase [Prevotella denticola F0289]
 gi|325482854|gb|EGC85854.1| alanine racemase [Prevotella denticola CRIS 18C-A]
 gi|326945620|gb|AEA21505.1| alanine racemase [Prevotella denticola F0289]
          Length = 826

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFLKPETKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           GV LR     + I ++        K +FD +L P +     L     +         P  
Sbjct: 527 GVTLRKNGITSNIMIMNPEMSS-FKTLFDYDLEPEVYCFRLLDALVKAAQKEGITGFPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   Q +  +      ++       + SH   +D D     ++ Q   F 
Sbjct: 586 IKLDTGMHRLGFDPQKDMDELISRLKHQNAIIPRSVFSHFVGSDADSFDGFSARQFALFE 645

Query: 184 T-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +    I   + +S+GI   P     + R G+ LYG   + NK     +  T 
Sbjct: 646 EGSGKLQSAFKHKIIRHMDNSAGIEHFPERQMDMCRLGLGLYGINPRTNKIINNVS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  +  +  DSLIA   IGYADG    L               
Sbjct: 704 KTTILQLRHVPAGDTVGYSRKGTIEHDSLIAAIPIGYADGLNRHLGNRHC---------- 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 754 YCLVNGKKAAYVGNICMDVAMIDVTGI-DCKEGDSVEIFGDHLPVTVLSDVLDTIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 813 TTVSNRVKRVY 823


>gi|168233845|ref|ZP_02658903.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194471678|ref|ZP_03077662.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194458042|gb|EDX46881.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205332109|gb|EDZ18873.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 356

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++    GE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSVGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|77406426|ref|ZP_00783484.1| alanine racemase [Streptococcus agalactiae H36B]
 gi|77174959|gb|EAO77770.1| alanine racemase [Streptococcus agalactiae H36B]
          Length = 366

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 162/381 (42%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   R  IDL A+ NN  S+      + +T AVVK NAYG G  +++     + V
Sbjct: 1   MISSYHRPTRALIDLEAIANNVKSVQEHIPSDKKTFAVVKANAYGHGAVEVSKY-IESIV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR       I VL  + P Q  +  + N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEAIELRQAGIVKMILVLGVVMPEQVILAKNENITLTVASLEWLRLCQTSAV 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+   +  +   +   +    +  I +H A AD+  +   + 
Sbjct: 120 DLSGLEVHIKVDSGMGRIGVRQLDEGNKLISELGESGASVKGIFTHFATADEADNCKFNQ 179

Query: 178 QLERFRTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F+  IS           ++S+  L      F   R G+ +YG       ++  +P+
Sbjct: 180 QLTFFKDFISGLDNCPDLVHASNSATSLWHSETIFNAVRLGVVMYGLNPSGTDLDLPYPI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              ++ E+ ++ +++   G  V YG   ++T D  +    IGYADG+   + G       
Sbjct: 240 NPALSLESELVHVKQLHDGSQVGYGATYQVTGDEFVGTVPIGYADGWTRDMQGFS----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G +  I+G+++MD     +    +  +G  +   G      I   DVA 
Sbjct: 295 -------VIVNGELCEIIGRVSMDQMTIRLPQKYT--IGTKVTXIGQQGSCNITTTDVAQ 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  ++Y
Sbjct: 346 KRQTINYEVLCLLSDRIPRYY 366


>gi|148553730|ref|YP_001261312.1| alanine racemase [Sphingomonas wittichii RW1]
 gi|148498920|gb|ABQ67174.1| alanine racemase [Sphingomonas wittichii RW1]
          Length = 378

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 196/365 (53%), Gaps = 16/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+IDL A+ +N+  +   +  A  AAVVK +AYGLG  ++A AL +AG + FFV  + E 
Sbjct: 12  LRIDLDAIIDNYRLIQQRAAPAEVAAVVKADAYGLGAARVAAALRDAGCRRFFVAHLVEA 71

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
            +LR        I VL G+ PG E    +   +PV++++ Q+  + +   +     P  +
Sbjct: 72  ARLREAIGDGVEIGVLNGLQPGAETACAELGAVPVLNALDQIERWAALARASSARLPCMI 131

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGL+  E               + LI+SHLACAD+P    N  Q + F    
Sbjct: 132 QFDTGMSRLGLAPGEVRALIDRPERLDGLDIRLIMSHLACADEPERASNQHQAQAFDAFC 191

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + + GI  SL +S G LL   +H+ + R GI+LYGG  +   + PM+ VVT +AR+I +R
Sbjct: 192 ARFPGIPRSLDNSGGALLPRAHHYDVVRAGIALYGGAPQTGPN-PMRPVVTLDARVIQLR 250

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  V YG   +  R + +A  ++GYADG+P +L              G  ++ G+ 
Sbjct: 251 TVEPGTAVGYGLTHRFDRPARLATLSVGYADGWPRSLGNR-----------GAAYVAGHR 299

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            PI+G+I+MD    D++D     +  G  I++ GP   +DDVA  +GT +Y++L ++G R
Sbjct: 300 APIVGRISMDSLTIDVSDIPEELLLPGSLIELIGPHQSIDDVARDAGTISYEILTQLGHR 359

Query: 365 YAKFY 369
           YA+ Y
Sbjct: 360 YARSY 364


>gi|238751628|ref|ZP_04613118.1| Alanine racemase, catabolic [Yersinia rohdei ATCC 43380]
 gi|238710190|gb|EEQ02418.1| Alanine racemase, catabolic [Yersinia rohdei ATCC 43380]
          Length = 358

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I+L+AL +N + +    G A+  +VVK NAYG G  ++   L       F +  
Sbjct: 3   RPISATINLSALHHNLNIVRQHVGAAKIWSVVKANAYGHGLARVWQGLAA--TDGFAMLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    ++ ++ D   +                        
Sbjct: 61  LNEAIMLREQGWQGPILLLEGFFQPRDIMLLDHYHLTTTVHSDWQLEAINAARLSAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+ ++G NRLG  + +       + +        ++SH A AD+P       Q    + 
Sbjct: 121 YLKFNSGMNRLGFPIGQMDAIWQWATSLSNVGDITLMSHFANADNPIG--VGEQFSVIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             +        LA+S+ IL  P  HF   RPGI LYG +   +        +Q V++  +
Sbjct: 179 ASAAIPAAR-CLANSAAILGNPETHFDWVRPGIILYGASPSGDVADIAEIGLQPVMSLNS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG  V YG + +      I V A GYADGYP                G   
Sbjct: 238 EIIALQSLTAGHCVGYGSRYQARSAQRIGVVACGYADGYPRLAPN-----------GTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     ++G  ++I+G ++ +D VA A+GT  Y+L+  
Sbjct: 287 MVDGILTQTVGAISMDMLTVDLTPCPQAQIGSKVEIWGENVPIDTVAQAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LANRVK 352


>gi|226305403|ref|YP_002765361.1| alanine racemase [Rhodococcus erythropolis PR4]
 gi|226184518|dbj|BAH32622.1| alanine racemase [Rhodococcus erythropolis PR4]
          Length = 400

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 158/378 (41%), Gaps = 26/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               +DL A+ +N   +   +G+A   AV+K + Y  G   +A    +AG ++  VT++ 
Sbjct: 28  TEAVVDLDAIAHNVRVLREFAGDAALMAVIKADGYNHGAVAVARTALSAGARELGVTTIA 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPYA 125
           E + LR     A +                +++   +SS              G      
Sbjct: 88  EALVLREAGITAPVLAWLHGLDADFSSAIRSDVEIGVSSPRHLAAVVDAARVLGQQATVT 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           L+VDTG NR G+S  E      +    +         + SHLA +D+P   V  +Q +R 
Sbjct: 148 LKVDTGLNRNGVSRTEWPQMLDDLATARDEGTIRLRGVFSHLAHSDEPHHDVIDMQKQRL 207

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
              +       ++     L++S+  +  P+  F + RPGI++YG +         ++  +
Sbjct: 208 IEAVVDVRARGFEPEVVHLSNSAATVTRPDLQFDMVRPGIAIYGLSPVPELGDFGLRPAM 267

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A++IL++K  AGE VSYG Q     D+ +A+  +GYADG   +LSG           
Sbjct: 268 TLRAKVILVKKVAAGEGVSYGHQWVAPHDTTLALLPVGYADGLTRSLSGKF--------- 318

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             +  + G     +G+I MD  + D+  D   +  GD    FG     +      A    
Sbjct: 319 --EVQLGGKRRQAVGRICMDQVLVDLGPDGDGVREGDTAIFFGNGDHGEPNAQAWADVLD 376

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+++  I  R  + Y
Sbjct: 377 TIHYEVVTGIRGRTVRTY 394


>gi|16765143|ref|NP_460758.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56413279|ref|YP_150354.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|167993251|ref|ZP_02574346.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168259965|ref|ZP_02681938.1| alanine racemase [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|197362204|ref|YP_002141841.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|113661|sp|P06191|ALR2_SALTY RecName: Full=Alanine racemase, catabolic
 gi|153939|gb|AAA27054.1| alanine racemase (dadB) (EC 5.1.1.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16420333|gb|AAL20717.1| alanine racemase 2 [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56127536|gb|AAV77042.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197093681|emb|CAR59151.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|205328703|gb|EDZ15467.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205350739|gb|EDZ37370.1| alanine racemase [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|261246987|emb|CBG24804.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267993756|gb|ACY88641.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301158326|emb|CBW17825.1| Alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312912792|dbj|BAJ36766.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321224435|gb|EFX49498.1| Alanine racemase, catabolic [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322616798|gb|EFY13706.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322620391|gb|EFY17257.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322625707|gb|EFY22526.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322626157|gb|EFY22967.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322638917|gb|EFY35610.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322640736|gb|EFY37386.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322644122|gb|EFY40667.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322649194|gb|EFY45632.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655353|gb|EFY51661.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660890|gb|EFY57121.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322662812|gb|EFY59019.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322667996|gb|EFY64155.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322674242|gb|EFY70336.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675403|gb|EFY71477.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322683182|gb|EFY79198.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322686875|gb|EFY82853.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323130076|gb|ADX17506.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323195234|gb|EFZ80414.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323200174|gb|EFZ85260.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323203827|gb|EFZ88845.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207381|gb|EFZ92329.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213735|gb|EFZ98517.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217366|gb|EGA02085.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323220884|gb|EGA05320.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227984|gb|EGA12132.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231387|gb|EGA15500.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323235827|gb|EGA19906.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240396|gb|EGA24439.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323245289|gb|EGA29289.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249860|gb|EGA33759.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323252850|gb|EGA36686.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257434|gb|EGA41128.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263314|gb|EGA46850.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323266762|gb|EGA50248.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323268968|gb|EGA52424.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|332988689|gb|AEF07672.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 356

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|169349572|ref|ZP_02866510.1| hypothetical protein CLOSPI_00299 [Clostridium spiroforme DSM 1552]
 gi|169293647|gb|EDS75780.1| hypothetical protein CLOSPI_00299 [Clostridium spiroforme DSM 1552]
          Length = 369

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 166/371 (44%), Gaps = 18/371 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQD 59
           M  +      I+L  LK N  ++          AV+K +AYG G +++A  + +   ++ 
Sbjct: 13  MSLHRDTYAMINLKYLKENIETIYKRFKRP-LMAVIKADAYGHGYKEVASYIKDLEYIEM 71

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSC 118
           F V +++E ++LR       I +L  +   +E+I    +    ++ +  +  ++ + +  
Sbjct: 72  FAVATLQEAIELRELGITKGILILGAVPTTKEEIELAISYDISLTMISLEYMYHLQTLIS 131

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  +++DTG  R+GL+ ++ L+    + +++   L  I +H A AD   +     Q
Sbjct: 132 NKPLKIHIKLDTGMQRIGLTNKKELEEMLQTIDRRKFILEGIFTHYATADGEEAAFVKQQ 191

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
            + F  L+  ++       +S+ +    +    L R GI +YG     N+S   + V++ 
Sbjct: 192 -QLFYKLVGQHEFKYIHCCNSAAMAYHQDNKSNLGRIGIVMYGIDPAGNESDYYKQVMSL 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             R+ +++K  AG  V YG      +D  +A   IGYADG      G             
Sbjct: 251 FTRVSMVKKIKAGSRVGYGLTYTAKQDEYLATLPIGYADGIIRKNQGR------------ 298

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           + +I G    I+G++ MD  M  +    S++VGD ++IFG  I L  +A    T  Y+++
Sbjct: 299 RVYINGKYFEIVGRVCMDQMMVRV--DESVKVGDKVEIFGDHISLASMAKDLDTIPYEII 356

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 357 CLISKRVERIY 367


>gi|52081594|ref|YP_080385.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52786974|ref|YP_092803.1| YncD [Bacillus licheniformis ATCC 14580]
 gi|319647506|ref|ZP_08001726.1| alanine racemase [Bacillus sp. BT1B_CT2]
 gi|52004805|gb|AAU24747.1| putative alanine racemase [Bacillus licheniformis ATCC 14580]
 gi|52349476|gb|AAU42110.1| YncD [Bacillus licheniformis ATCC 14580]
 gi|317390354|gb|EFV71161.1| alanine racemase [Bacillus sp. BT1B_CT2]
          Length = 393

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 94/384 (24%), Positives = 162/384 (42%), Gaps = 31/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             + ++++L A+K N  +        ++  AVVK NAYG G  ++A      G  +  V 
Sbjct: 6   REVWVEVNLDAIKKNLRAFRRHIPKKSKIMAVVKANAYGHGSVEVARHALEHGASELAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC---GV 120
           SVEE V LR    +A I VL        K     N+      V  +   ++++       
Sbjct: 66  SVEEAVVLRKAGIKAPILVLGFTPLSCVKEAAAWNISLSAFQVDWIKEANEILENEADPN 125

Query: 121 SHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                + VDTG  RLG+  +E  L         +  +   I +H + AD+P + +  +Q 
Sbjct: 126 RLAVHINVDTGMGRLGVRTKEKLLAIVEALTASENLEWEGIFTHFSTADEPDTELTMIQH 185

Query: 180 ERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---- 230
           E+F + +       +K     + +++  +  P +   + R GI +YG             
Sbjct: 186 EKFISFLRFLKEQGFKLPTVHMNNTAAAIAFPEFSADMIRLGIGMYGLYPSDYIRQLNLV 245

Query: 231 PMQTVVTAEARIILIRKA-LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            +   ++ +ARI  ++        VSYG      R  +IA   +GYADGY   LS     
Sbjct: 246 KLVPALSLKARIAYVKTMLTEPRTVSYGATYVAERGEVIATIPVGYADGYSRELSNR--- 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                   G    +G  VP+ G++TMDM M  + +    +  + + I+G     +I +D+
Sbjct: 303 --------GFILHRGRRVPVAGRVTMDMIMVSLGEGEGKQG-EEVVIYGRQKGAEISVDE 353

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY+++  I  R  +FY
Sbjct: 354 IAEMLDTINYEVVSTISWRVPRFY 377


>gi|188995058|ref|YP_001929310.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Porphyromonas gingivalis ATCC
           33277]
 gi|188594738|dbj|BAG33713.1| alanine racemase [Porphyromonas gingivalis ATCC 33277]
          Length = 823

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 23/370 (6%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L+A+ +N +    L     +T  +VK   YG+G  ++   L    V    V   +E
Sbjct: 465 LRINLSAIIHNLNFYRNLVPSGTKTICMVKAQGYGVGSYELVKTLQEHRVDYIAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G +LR       I V+        + + D  L P I S   L  +S+ +     V +P  
Sbjct: 525 GKELRERGISMPIVVMNPQRNA-FQTLIDYGLEPEIYSFALLASFSETVVRNGLVGYPVH 583

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRT 184
           +++DTG +RLG    +               +  + +HLA ADDP        QL  F  
Sbjct: 584 IKIDTGMHRLGFLPSDMTRLGEILAKDAGLSIRSVFTHLAGADDPDLDDFTRSQLLSFDA 643

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +    +        + +++G+    +YH  + R GI LYG T    +      V T  
Sbjct: 644 AFASLSSLLGYIPLRHVLNTAGVERFADYHADMIRLGIGLYGVTASGVQGLRP--VATLM 701

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             I+ I+   + + V YG + ++ + S IA+  IGYADG    LS             G+
Sbjct: 702 TTILQIKDISSSDTVGYGRKGRVQQPSRIAIIPIGYADGLDRRLSCGV----------GE 751

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             ++G+  PI+G + MD+ M D+T     E GD + +FG ++ +++VA    T  Y++L 
Sbjct: 752 VLVRGHRCPIVGNVCMDICMIDVTGMP-AEEGDPVVVFGEELPIEEVAHKMNTIPYEVLT 810

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 811 GISPRVRRVY 820


>gi|198244745|ref|YP_002215339.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197939261|gb|ACH76594.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326623083|gb|EGE29428.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 356

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRVMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   +GE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLNSGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|301067541|ref|YP_003789564.1| alanine racemase [Lactobacillus casei str. Zhang]
 gi|300439948|gb|ADK19714.1| Alanine racemase [Lactobacillus casei str. Zhang]
          Length = 378

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++ ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPAKVLIDETAILHNIQHEVARLKKQTQLFAVVKADAYGHGMLRVARVAKAAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SS   L     ++      P
Sbjct: 67  ILDEALGLRKADYSEPVLVLGIVPSQYAAIAAAQTISLPVSSTEWLEQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
                L +DTG  R+G +  +AL            Q  +  I +H A AD P       Q
Sbjct: 127 PLRIHLALDTGMGRIGFTEDQALKTAVAFVEAHSKQFVIEGIFTHFATADAPDDTYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           +++F  L+         +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VDKFNHLVDLLPSRPRYVHVSNSATSLWHAACNGNMIRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   +   D  I    IGYADG+   L G       
Sbjct: 247 EPALSLESELTYCKQVHAGDGISYGVTYRAKGDEFIGTVPIGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGQYCEIVGRICMDQFMIRLPKAYPA--GTKVVLVGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   +  R  +
Sbjct: 353 YSKTIHYEIACNLTPRLKR 371


>gi|269216099|ref|ZP_06159953.1| alanine racemase [Slackia exigua ATCC 700122]
 gi|269130358|gb|EEZ61436.1| alanine racemase [Slackia exigua ATCC 700122]
          Length = 435

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 96/386 (24%), Positives = 165/386 (42%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNN-WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +  ++IDL A+++N + +   L    R  AVVK + YG G  ++A    +AG     V
Sbjct: 59  RRWSWVEIDLGAIRHNTYANKRCLKPGTRLMAVVKADGYGHGAVQVARTALSAGASQLAV 118

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVS 121
            +V+EG++LR     A I +L         ++   +++P + +    + +     + G+ 
Sbjct: 119 ATVDEGIELRRAGIAAPILILSEPPASAAPLLLQHDIMPSVYTPEFAIAYAELADAHGMR 178

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            PY L ++TG NR+G+   EA++F       +        +H A AD   +   ++Q  R
Sbjct: 179 APYHLALNTGMNRIGVRHDEAVEFARQISFHRALDQVGTFTHFATADCAETLDFNLQFRR 238

Query: 182 FRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQT 234
           F   I   +  GI+      A+S+ +L  P  H  + R GISLYG         +  ++ 
Sbjct: 239 FADAIEGMRVAGIDPGIVHCANSAALLRYPETHMDMVRMGISLYGFHPCPETRGAAVLKP 298

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  +      E V YG   + T    I    +GYADG+   LSG         
Sbjct: 299 AMSVHARITAVNAPQLSEGVGYGLHYRSTGSVRICTVPVGYADGFARALSGRTDF----- 353

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT-------DSLSIEVGDYIQIFGP----DIKL 343
                    G     +G I MD +MF++          L  +VGD + + G      + +
Sbjct: 354 ------IYGGRRCHQVGNICMDQSMFEVDMRSLGTRPRLDPQVGDEVVVIGEKDGLSVGV 407

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +++    GT  Y++   +  R  K Y
Sbjct: 408 EELCDVLGTIPYEVCCALAMRMPKVY 433


>gi|200389510|ref|ZP_03216121.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|199601955|gb|EDZ00501.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
          Length = 356

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---HSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|326406390|gb|ADZ63461.1| alanine racemase [Lactococcus lactis subsp. lactis CV56]
          Length = 367

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 154/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  +      +DL A++NN          NA     VK +AYG G  +++ A+ +  V
Sbjct: 1   MKTSPHRNTSAIVDLKAIRNNIEKFKKHIHPNAEIWPAVKADAYGHGSVEVSKAVSDL-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR +     I VL GI      I    N+     S+  L    +  +
Sbjct: 60  GGFCVSNLDEAIELRNHLVTKPILVLSGIVQEDVDIAAALNISLTAPSLEWLKLVVQEEA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   + VD+G  R+G+   E  +      +K       I +H A AD         
Sbjct: 120 ELSDLKIHIGVDSGMGRIGIRDVEEANQMIELADKYAINFEGIFTHFATADMADDTKFKD 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           Q  RF  +++        +   +++  L        + R GIS+YG       +     +
Sbjct: 180 QQARFNKIMAGLSRKPKFVHSTNTAAALWHKEQVQAIERLGISMYGLNPSGKTLELPFEI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++  + +  I+K  AGE V YG   + + ++ I    IGYADG+   + G       
Sbjct: 240 EPALSLVSELTHIKKIAAGETVGYGATYETSEETWIGTVPIGYADGWTRQMQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 K  + G    I+G++ MD  M  +  S  +  G  + + G D    I   DVA 
Sbjct: 294 ------KVLVNGEFCEIVGRVCMDQMMIKLDKSYPL--GTKVTLIGRDKTNEITTTDVAD 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 WRGTINYEVLCLLSDRIKRIY 366


>gi|121603048|ref|YP_980377.1| alanine racemase [Polaromonas naphthalenivorans CJ2]
 gi|166969423|sp|A1VIH8|ALR_POLNA RecName: Full=Alanine racemase
 gi|120592017|gb|ABM35456.1| alanine racemase [Polaromonas naphthalenivorans CJ2]
          Length = 365

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 152/376 (40%), Gaps = 31/376 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I L AL +N   +   + +A+  AVVK NAYG G E++  AL +     F +  
Sbjct: 3   RPILATIHLAALSHNLARVRTAAPDAKVWAVVKANAYGHGIERVFDALRS--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  +LR    +  I +L G       ++     L   I    Q+   +   +  + H 
Sbjct: 61  LDEARRLRALDWRGPILLLEGCFEARDLELCSRLGLWHTIHCQEQIDMLAAHKTQ-LPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG + +                   ++ H   AD P       QL+ F 
Sbjct: 120 VFLKMNTGMNRLGFTPERFRAAWIRLNALPQVDEISLMQHFPDADGPKGIT--AQLQAFD 177

Query: 184 TLISHYKGIEASLASSSGILLGPNY---HFQLTRPGISLYGGTDKINKSHPMQT----VV 236
            +     G E +L++S+ IL             RPGI LYG      +           +
Sbjct: 178 AVTHDLPG-ERTLSNSAAILRHTGALAGRSDWVRPGIVLYGSAPDFPEHSASDWELQPTM 236

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +RII ++   AG+ V YG          I V A GYADGYP                
Sbjct: 237 TLSSRIIGLQTLAAGDTVGYGSSFVAEGPMRIGVVACGYADGYPRHC-----------PT 285

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDVALAS 350
           G    + G    ++G+++MDM   D+T      +G  + ++G        + +D+VA A+
Sbjct: 286 GTPVLVNGVRTRMVGRVSMDMITVDLTPVPRAGMGSEVTLWGRASKGGAMLPIDEVARAA 345

Query: 351 GTTNYDLLVRIGTRYA 366
           GT  Y+L+  +  R  
Sbjct: 346 GTVGYELMCAVAPRVP 361


>gi|260436550|ref|ZP_05790520.1| alanine racemase [Synechococcus sp. WH 8109]
 gi|260414424|gb|EEX07720.1| alanine racemase [Synechococcus sp. WH 8109]
          Length = 376

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 110/381 (28%), Positives = 180/381 (47%), Gaps = 24/381 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++  +   +++   A++ N  ++   L    +  AVVK + YG G E +A A    G   
Sbjct: 5   LNPRQRAWVEVSPAAIRGNARALCQHLGPRTQLMAVVKADGYGHGAETVARAALQGGATS 64

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQ-LTFYSKLMS 117
             V +++EG++LR    +A + +L  ++ P   +      L+P +SS+ +     +    
Sbjct: 65  LGVATLQEGLELRRAGLEAPVLLLSNLNKPDDLRTCLHWGLMPTLSSLREAQLCNALAAD 124

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G      L++DTG  RLG SL E         + +   L  I SHLACAD+P+  + S+
Sbjct: 125 SGRCFDVQLKIDTGMARLGCSLSEGHQTAAELESLEHLNLEGIYSHLACADEPNDALTSL 184

Query: 178 QLERFRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--P 231
           Q ERF ++++       GI   LA+S+G LL    H  L R G++LYG     + S+  P
Sbjct: 185 QQERFVSMLAALPQAGAGITRHLANSAGTLLNRELHHDLVRVGLALYGHAPASHLSNVIP 244

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q  +   AR+ LIR+  AG  VSYG +    R + +AV  IGYADG   +LSG      
Sbjct: 245 LQPALAVRARVSLIREVPAGTGVSYGHRFITERPTRLAVVGIGYADGVLRSLSGRI---- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                      +   +P +G ITMD  + D TD+  +E GD + + G D    +     +
Sbjct: 301 -------HALHRNRQLPQVGAITMDQLLLDATDAAELEQGDIVTLLGQDGDLEVSPQSWS 353

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
              G+  +++L     R  + 
Sbjct: 354 NHCGSIPWEILCGFKRRLPRV 374


>gi|254294303|ref|YP_003060326.1| alanine racemase [Hirschia baltica ATCC 49814]
 gi|254042834|gb|ACT59629.1| alanine racemase [Hirschia baltica ATCC 49814]
          Length = 370

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 187/365 (51%), Gaps = 22/365 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             + L  + NNW  +  LSG A T AVVK NAYGLG E++A  LY AG + FFV  ++E 
Sbjct: 17  AIVHLQNVVNNWKELARLSGAADTGAVVKANAYGLGAEQVASTLYEAGCRTFFVAHIDEA 76

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           +++R      A +F+ +GI       +   +++PV++S  Q       +  G   P AL 
Sbjct: 77  IQIRKTLGNLALVFIFHGIQADNVDDVIAHDIVPVLNSTDQ---VELWIRSGAPFPAALH 133

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG NRLGL L+E     +        ++  ++SHLACAD P   +N+ QL  F  + +
Sbjct: 134 VDTGMNRLGLQLKE---LANVKKRLPANRIGWVMSHLACADIPEHPMNARQLALFEKVAA 190

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR- 246
            +   E SL++++GI LG  Y F LTRPGI LYGG  +     P    VT  A I+ I  
Sbjct: 191 IWPHAEKSLSNTAGICLGSKYTFDLTRPGIGLYGGYSRKGVFTPSHC-VTLSAPILSIIE 249

Query: 247 -KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
             A     + YG   K+T    +A  A+GYADG   +LS             G  F+ G 
Sbjct: 250 PDASNENTIGYGATSKVTNGQRLATIALGYADGALRSLSNS-----------GFVFVNGV 298

Query: 306 MVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              I+G+++MD+   DIT++ +   V D ++  G    ++  A A+ T +Y+LL  +G R
Sbjct: 299 PCSIVGRVSMDLITIDITNAPTRTTVLDRVEFLGQHASVEIQARAASTASYELLTSMGER 358

Query: 365 YAKFY 369
             + Y
Sbjct: 359 IPRVY 363


>gi|328951278|ref|YP_004368613.1| Alanine racemase [Marinithermus hydrothermalis DSM 14884]
 gi|328451602|gb|AEB12503.1| Alanine racemase [Marinithermus hydrothermalis DSM 14884]
          Length = 364

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 93/372 (25%), Positives = 157/372 (42%), Gaps = 25/372 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               L+I L AL +N   +   L       AV+K +AYG G   IA  L   GV+ F V 
Sbjct: 2   RATWLEIHLDALAHNLRVIRARLQPGTGIIAVIKADAYGHGAVPIAHELARLGVERFAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +VEEG +LR    Q  + +L  +HP +     +  LIP +S++        + +      
Sbjct: 62  TVEEGARLRQARIQHPVHLLGSLHPEEAAPALEHALIPTLSTL---EAARAVAAHRPGAT 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++ D+G  R+G+   EAL            ++  + +H A AD+        QLE F 
Sbjct: 119 VHVKADSGMGRVGV-PLEALRRFVEEVEAMGLEVEGVFTHFASADEDP-AATRRQLEAFL 176

Query: 184 TLISHYKG-IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-KSHPMQTVVTAEAR 241
            + + ++G  +   A+S+ +L  P  H    RPGI+LYG           +  ++  +A 
Sbjct: 177 AVTAPWRGRYKLHAANSAALLRFPEAHLDFVRPGIALYGLPPGEGFAREGLWPILAWKAH 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
             L+++   G+ + YGG     R+  IA   +GYADG+   LS             G   
Sbjct: 237 PTLVKRVQPGQRIGYGGTYTAQREEWIATLPLGYADGFSRALSNR-----------GWVR 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD----VALASGTTNYDL 357
           +     P++G+++MD     +     + +    ++  PD+         A   GT  Y+L
Sbjct: 286 LGSTYCPVVGRVSMDQITVRLPG--PVGLDAVFEVITPDLDARTSLTGRAAQLGTIPYEL 343

Query: 358 LVRIGTRYAKFY 369
              +  R  + Y
Sbjct: 344 ATLLSPRLPRVY 355


>gi|167837061|ref|ZP_02463944.1| alanine racemase [Burkholderia thailandensis MSMB43]
          Length = 356

 Score =  259 bits (661), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 149/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +  ++  A+VK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLTVVRRHAAQSKVWAIVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDLDVIDRYSLTTAVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + Q+  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKFRAAWERARACPGIGQITLMTHFSDADGGRG--VAEQMATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +   +        ++  +T  +
Sbjct: 179 GAQGIAGAR-SLANSAAVLWHPSAHFDWVRPGIVLYGASPSGHSADIADKGLKPAMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTLAKGQAVGYGSVFVAEETMRIGVVACGYADGYPRIA-----------PEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA    T  Y+L+  
Sbjct: 287 VVDGVRTRIVGRVSMDMLTVDLTPVPQAGVGARVELWGETLPIDDVAACCMTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|85542701|gb|ABC71322.1| alanine racemase [Acetobacter aceti]
          Length = 368

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 120/365 (32%), Positives = 183/365 (50%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L I+L+A+  N+  +    G    AAVVK +AYGLG  ++AP L   G + FFV  V+EG
Sbjct: 11  LTINLSAIAENYRYLVNKLGKTVCAAVVKADAYGLGVAQVAPILEQVGAKHFFVAHVDEG 70

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           + LR   +P   + VL+G  P   ++    NL PV++S+ Q+                A+
Sbjct: 71  LALRPYLSPHTSVTVLHGPRPDAAEVCVRNNLRPVLNSLKQVAVLRDLAAKMDKPLDVAI 130

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +R GLS  +           +   +SL++SHLACAD P +  N++Q ERF    
Sbjct: 131 QLDTGMSRFGLSEADIHKLMATPELLEGLSVSLVMSHLACADTPENAANAMQRERFENYA 190

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                   SL++SSGI LG  +HF L RPG +LYG   + +  +P++ VV  +  I+ IR
Sbjct: 191 RMLPKAALSLSASSGIFLGQPFHFDLVRPGAALYGVAPQNDGVNPLKPVVGLQTHILQIR 250

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V YG   + T    +A  A+GY               + +    G  + KGY 
Sbjct: 251 TLSKGDRVGYGLTWQATGPCRVATIAVGY-----------ADGFARAGAAAGCAWYKGYR 299

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PILG+I+MD    D++      +E    +++      +D VA A GT  Y++L  +G R
Sbjct: 300 LPILGRISMDSMTVDLSAVPEGLLEEDSMVELLNESYGVDAVAKAEGTIGYEVLTSLGRR 359

Query: 365 YAKFY 369
           Y + Y
Sbjct: 360 YHRVY 364


>gi|300313242|ref|YP_003777334.1| alanine racemase [Herbaspirillum seropedicae SmR1]
 gi|300076027|gb|ADJ65426.1| alanine racemase protein [Herbaspirillum seropedicae SmR1]
          Length = 368

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 120/377 (31%), Positives = 185/377 (49%), Gaps = 19/377 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +     L IDL A+  NW +++A    AR  AVVK +AYGLG   +  AL +AG ++F
Sbjct: 1   MSTQPTASLTIDLPAIVANWKTLSARVAPARCGAVVKADAYGLGATMVVRALLDAGCREF 60

Query: 61  FVTSVEEGVKLRLYTPQ-----ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           FV  V EGV L+          AR+ +L G  PG E +     L PV++S+ Q+  +   
Sbjct: 61  FVALVSEGVSLKQTLADRWPKGARLHILNGTLPGDELLCLHYGLTPVLNSLEQVRSWQGY 120

Query: 116 MSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                     ALQVDTG  RLGL+  E    T +         + ++SHL  A++ ++ +
Sbjct: 121 ARQLDFPLAAALQVDTGMARLGLAPAEVAQLTESRAGLAGIAPTFLMSHLVSAEETANPL 180

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           N  QLERF  +  H+  I   LA+SSGI LG ++HF   RPG +LYG        +PM+ 
Sbjct: 181 NQHQLERFVAIRRHWPEIAGCLANSSGIFLGADFHFGCVRPGAALYGVHPGGAGPNPMRP 240

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  +A +I  R+  AGE V Y    + +R + +   A+GYADGY  + S          
Sbjct: 241 VLRLQAPLIQWRELQAGESVGYNHTWQASRPTRVGTIALGYADGYLRSASNRGVLRL--- 297

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSI--EVGDYIQIFGPDIKLDDVALASGT 352
                   +G   P++G+++MD    D++         G    +      ++ +A+ +GT
Sbjct: 298 --------EGVEAPLIGRVSMDSITVDLSAIDPARLRPGLLFDVLDAQQDINALAVQAGT 349

Query: 353 TNYDLLVRIGTRYAKFY 369
             Y++L  +  RY + Y
Sbjct: 350 NAYEILTSLRHRYRRHY 366


>gi|281421247|ref|ZP_06252246.1| Mur ligase domain protein/alanine racemase [Prevotella copri DSM
           18205]
 gi|281404782|gb|EFB35462.1| Mur ligase domain protein/alanine racemase [Prevotella copri DSM
           18205]
          Length = 825

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 90/373 (24%), Positives = 150/373 (40%), Gaps = 24/373 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+++L A+  N +   A +    +   ++K + YG G  +IA  L +  V    V   
Sbjct: 464 TTLEVNLNAVVANLNYYRAFMKPETKLVCMIKADGYGAGAVEIAKTLQDHRVDYLAVAVA 523

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           +EGV LR     + I ++        K +FD +L P + S   L    K          P
Sbjct: 524 DEGVTLRKNGITSNIMIMNPEMTA-FKTMFDYDLEPEVYSFRLLDALIKAAEKEGVTGFP 582

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPSSHVNSVQLER 181
             +++DTG +R+G   +  ++        +   +   +        DD     ++ Q E 
Sbjct: 583 VHIKLDTGMHRMGFDPENDMEELIGKLKHQNAIIPRSVFSHFVGSDDDSFDDFSAHQFEL 642

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F              I   + +S+GI   P     + R G+ LYG   + NK+    +  
Sbjct: 643 FDKGSKQLQAAFDHKILRHICNSAGIEHFPERQLDMCRLGLGLYGINSRNNKTINCVS-- 700

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  I+ +    AG+ V Y  +  L RDS+IA   IGYADG    L             
Sbjct: 701 TLKTTILQMHNVKAGDSVGYSRKTILDRDSVIAAIPIGYADGLNRRLGNRH--------- 751

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
                + G     +G I MD+ M D+TD    + GD ++IFG  + +  ++    T  Y+
Sbjct: 752 -AYCLVNGQKAEYVGNICMDVAMIDVTDIP-CKEGDSVEIFGEHLPVQTLSDILETIPYE 809

Query: 357 LLVRIGTRYAKFY 369
           +L  I  R  + Y
Sbjct: 810 VLTTISNRVKRVY 822


>gi|229816616|ref|ZP_04446914.1| hypothetical protein COLINT_03673 [Collinsella intestinalis DSM
           13280]
 gi|229807822|gb|EEP43626.1| hypothetical protein COLINT_03673 [Collinsella intestinalis DSM
           13280]
          Length = 383

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 107/384 (27%), Positives = 165/384 (42%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +   +ID  AL+ N  +  +L     R   VVK +AYG G    A  ++ AG   F V 
Sbjct: 10  RWAWAEIDTGALRRNTRAFKSLVGPRQRLCCVVKADAYGHGVANCAKVMHAAGADMFAVA 69

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSH 122
           +V EGV LR    +  I +L     G    + + +++P + S      +  +  + G   
Sbjct: 70  TVLEGVALREAGQKLPILLLSEPPQGAIDTLLEYDIMPSVYSPEFAWAYGERAAALGRVG 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            Y + ++TG NR+G+   E +DF  +       +     +H A ADDP    + +Q +RF
Sbjct: 130 KYHMAINTGMNRIGVHCTEVVDFRRSVDFHAGLECDGTFTHFATADDPDGWDHQLQCKRF 189

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTV 235
              I     + +        ++ G +L P  HF + R GI LYG       +   P++ V
Sbjct: 190 TEAISALREAGFDPGIVHCDNTPGSVLNPAMHFDMIRAGIGLYGLQPCERTASVLPLEPV 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++  AR+        GE V YG   ++ R    +    IGYADG P  LS          
Sbjct: 250 MSIRARVTHACYPAMGEGVGYGFTYRVPRTRVEVCTLPIGYADGLPRVLSNRMD------ 303

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSL-----SIEVGDYIQIFGPD----IKLDD 345
                   +G  +  +G I MD  M  ++++        EVGD + I G D    I LD+
Sbjct: 304 -----VLFRGERIRQVGNICMDQCMVAVSETSLRPTQEAEVGDLMTIVGRDGDAQITLDE 358

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A A GT NY+L    G R  K Y
Sbjct: 359 LARACGTINYELACGFGMRLEKIY 382


>gi|220934104|ref|YP_002513003.1| alanine racemase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254802394|sp|B8GNS7|ALR_THISH RecName: Full=Alanine racemase
 gi|219995414|gb|ACL72016.1| alanine racemase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 361

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 107/372 (28%), Positives = 171/372 (45%), Gaps = 20/372 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               R +IDL AL++N  +    +  +R  AV+K  AYG G   +A AL         ++
Sbjct: 2   RRAARARIDLNALRHNLRTARRAAPRSRVMAVIKAEAYGHGMLAVARALAAQADAF-AIS 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT--NLIPVISSVPQLTFYSKLMSCGVS 121
            ++E   LR       + VL G     + I      ++ PVI S  QL       +    
Sbjct: 61  CIDEARVLREAGVTLPLVVLQGFRDAAQLIEVARLGDVQPVIHSTGQLDVLES-AALPAP 119

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI-ISHLACADDPSSHVNSVQLE 180
               L++DTG +RLGL   EA    +              ++HLACAD+P      +QL+
Sbjct: 120 LRVWLKLDTGMHRLGLPPGEAAVLQNRIAALPQVAGVPGLMTHLACADEPERPETGIQLQ 179

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVT 237
            F    +   G E S+A+S+ +L  P       RPGI LYG +    +  +S  +Q V+T
Sbjct: 180 VFDAATADLPG-ERSIANSAAVLRTPAACRDWVRPGIMLYGASPLAGETAQSLDLQPVMT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A ++ +++  AG+ V YGG         +AV A+GY DGYP                G
Sbjct: 239 VSAPVVAVKRLAAGDAVGYGGGYVCQSPRTMAVVAMGYGDGYPRHA-----------PSG 287

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               + G    ++G+++MDM   D+T+   +  GD + ++G  + +D++A A+GT +Y+L
Sbjct: 288 TPVRVHGRRCALMGRVSMDMLCVDVTEVPGVAPGDDVTLWGEGLPVDEIAAAAGTISYEL 347

Query: 358 LVRIGTRYAKFY 369
           L  +G R    Y
Sbjct: 348 LCSVGGRLRLEY 359


>gi|186476117|ref|YP_001857587.1| alanine racemase [Burkholderia phymatum STM815]
 gi|184192576|gb|ACC70541.1| alanine racemase [Burkholderia phymatum STM815]
          Length = 363

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 145/348 (41%), Gaps = 22/348 (6%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
              +  ++  AVVK NAYG G  +  P L       F +  +EE VKLR       I +L
Sbjct: 29  RRYAPKSKIWAVVKANAYGHGLARAFPGLRA--TDGFGLLDLEEAVKLRELGWAGPILLL 86

Query: 84  YGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEA 142
            G   P    +I   +L   + S  QL                L++++G NRLG + ++ 
Sbjct: 87  EGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVNIQLKMNSGMNRLGYTPEKF 145

Query: 143 LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGI 202
                 +   +      +++H + AD       S Q+E F        G   SLA+S+  
Sbjct: 146 RAAWERARACQGVGQITLMTHFSDADSERGI--SHQMEAFERGAQGIAGAR-SLANSAAT 202

Query: 203 LLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGG 258
           L  P  HF   RPG+ LYG +        K   +Q  +T  + +I ++    G+ + YG 
Sbjct: 203 LWYPEAHFDWVRPGVMLYGASPSGVSSAIKDTGLQPAMTLASELIAVQTLAQGQTIGYGS 262

Query: 259 QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318
                    I V A GYADGYP                G    + G    I+G+++MDM 
Sbjct: 263 TFTAREGMRIGVVACGYADGYPR-----------VAPEGTPIIVDGIRTRIVGRVSMDMI 311

Query: 319 MFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
             D+T      VG  ++++G  + +DDVA + GT  Y+L+  +  R  
Sbjct: 312 TVDLTPCPQANVGSRVELWGAQLPVDDVAQSCGTIGYELVCAVAPRVP 359


>gi|322373681|ref|ZP_08048217.1| alanine racemase [Streptococcus sp. C150]
 gi|321278723|gb|EFX55792.1| alanine racemase [Streptococcus sp. C150]
          Length = 367

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 156/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     K+DL+A+  N   + +      +T AVVK NAYG G   +A    +  V
Sbjct: 1   MISSLHRPTLAKVDLSAISENIEQVVSHIPKKVKTFAVVKANAYGHGAVAVAK-QVSERV 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V++++E ++LR    +  I +L  + P +  +    N+   ++S+  L        
Sbjct: 60  DGFCVSNLDEALELRQAGLEQPILILGVVLPDEVPLAIQENITLTVASLEWLEMTKNQGL 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   ++VD+G  R+G+  Q   D            +  I +H A AD+        
Sbjct: 120 DLTGLTCHIKVDSGMGRIGVRSQGDADSLIAGLKTLGADVEGIFTHFATADEADDSKFKR 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPM 232
           QL  F  L+ +       +   +S+  +      F   R G+ +YG       +N  + +
Sbjct: 180 QLAFFTNLVENLADRPRLVHASNSATSIWHAETVFNAVRLGVVIYGLNPSGSALNLPYKI 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E  ++ ++   AG+ V YG     T D +I    IGYADG+   L G       
Sbjct: 240 RPALSLETALVHVKTLPAGQDVGYGATYTTTTDEVIGTIPIGYADGWTRDLQGF------ 293

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G   PI+G+++MD     +     +  G  + + G +    I   +VA 
Sbjct: 294 ------HVIVDGQFCPIVGRVSMDQITIRLPKVYPL--GTPVTLIGENGRASITATEVAE 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT NY++L  +  R  + Y
Sbjct: 346 KRGTINYEVLCLLSDRVPRSY 366


>gi|302379690|ref|ZP_07268175.1| alanine racemase [Finegoldia magna ACS-171-V-Col3]
 gi|302312597|gb|EFK94593.1| alanine racemase [Finegoldia magna ACS-171-V-Col3]
          Length = 391

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 97/379 (25%), Positives = 154/379 (40%), Gaps = 28/379 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LK+DL  LK+N+  +  +S   +  AVVK NAYG G   I   L   G+  F V+++ E 
Sbjct: 8   LKVDLDKLKHNYKEIKNISNLVKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQ 127
           ++LR       I +L  I     ++    N+   +         + +           ++
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 128 VDTGFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           +DTG  RLG        + L+     +      L  I SH + AD         Q   + 
Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEIFKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYNTYI 187

Query: 184 TLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTV 235
             +   +     +     ++    +   Y   + R GI LYG         N    ++ +
Sbjct: 188 GFMIDVENRGITVPIKHIANDAGAIIHGYFLDMIRCGIGLYGYHASDYVTENSRLNLEEI 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    + +I+    G  + YG       ++++A A IGYADGYPL LS           
Sbjct: 248 SSLYTTVSMIKTVPKGTDIGYGRTFTTNSETIVATATIGYADGYPLELSN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I G    ILGK+ MD  M D+T    ++VGD + +FG D    I L D+A  + 
Sbjct: 298 -KAYVIINGKKAKILGKVCMDQIMIDVTYIRDVKVGDKVLLFGKDDMGEISLYDLAEMAN 356

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T  Y+LL R+  R  + YT
Sbjct: 357 TNVYELLCRVTMRIPRIYT 375


>gi|26247504|ref|NP_753544.1| alanine racemase [Escherichia coli CFT073]
 gi|227886397|ref|ZP_04004202.1| alanine racemase [Escherichia coli 83972]
 gi|300971950|ref|ZP_07171738.1| alanine racemase [Escherichia coli MS 45-1]
 gi|301046830|ref|ZP_07193947.1| alanine racemase [Escherichia coli MS 185-1]
 gi|306813916|ref|ZP_07448089.1| alanine racemase [Escherichia coli NC101]
 gi|27923729|sp|P59237|ALR2_ECOL6 RecName: Full=Alanine racemase, catabolic
 gi|26107905|gb|AAN80104.1|AE016759_378 Alanine racemase, catabolic [Escherichia coli CFT073]
 gi|227836601|gb|EEJ47067.1| alanine racemase [Escherichia coli 83972]
 gi|300301198|gb|EFJ57583.1| alanine racemase [Escherichia coli MS 185-1]
 gi|300411075|gb|EFJ94613.1| alanine racemase [Escherichia coli MS 45-1]
 gi|305852553|gb|EFM53001.1| alanine racemase [Escherichia coli NC101]
 gi|307553240|gb|ADN46015.1| alanine racemase [Escherichia coli ABU 83972]
 gi|315290759|gb|EFU50131.1| alanine racemase [Escherichia coli MS 153-1]
 gi|324006029|gb|EGB75248.1| alanine racemase [Escherichia coli MS 57-2]
          Length = 356

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 101/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   +  AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPYARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P    +++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L     HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLANSAATLWHQEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +   +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 286 VLVDGVLTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALALRVP 352


>gi|210631730|ref|ZP_03296972.1| hypothetical protein COLSTE_00857 [Collinsella stercoris DSM 13279]
 gi|210159850|gb|EEA90821.1| hypothetical protein COLSTE_00857 [Collinsella stercoris DSM 13279]
          Length = 383

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 107/384 (27%), Positives = 164/384 (42%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +   +I+  AL+ N  +  +L G   R   VVK +AYG G    A  ++ AG   F V 
Sbjct: 10  RWAWAEINTGALRRNTRAFKSLIGARQRLCCVVKADAYGHGAASCAKVMHAAGADMFAVA 69

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSH 122
           +V EGV LR    +  I +L     G    + + +++P + S      +  +  S G   
Sbjct: 70  TVLEGVALREAGQKLPILLLSEPPAGAIDALLEFDIMPSVYSPEFAWAYGERAASLGKVG 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            Y + ++TG NR+G+   E +DF  +       Q     +H A AD+P    + +Q +RF
Sbjct: 130 KYHMAINTGMNRIGVHYTEVVDFRRSVDFHAGLQCDGTFTHFATADEPDGWDHQLQCKRF 189

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTV 235
              ++  +            ++ G +L P  HF + R GI LYG     +     P++ V
Sbjct: 190 SEAVACLRDAGFDPGIVHCDNTPGSILNPAMHFDMIRAGIGLYGLQPCERTRAVLPLEPV 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++ +AR+        GE V YG   ++ R    I    IGYADG P  LS          
Sbjct: 250 MSIKARVTHTCHPAMGEGVGYGFTYRVPRTRVEICTLPIGYADGLPRVLSNRM------- 302

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITD-----SLSIEVGDYIQIFGPD----IKLDD 345
               +    G  +  +G I MD  M  I++         EVGD + I G D    I LD+
Sbjct: 303 ----EVLFNGRRMRQVGNICMDQCMVAISENPMHPVPEAEVGDLMTIVGRDGDAQITLDE 358

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY+L    G R  K Y
Sbjct: 359 LASMCQTINYELACGFGMRLEKIY 382


>gi|290579829|ref|YP_003484221.1| putative alanine racemase [Streptococcus mutans NN2025]
 gi|254996728|dbj|BAH87329.1| putative alanine racemase [Streptococcus mutans NN2025]
          Length = 371

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +      + L  +K N   +      A +T AVVK NAYG G  ++A A+    V  F V
Sbjct: 6   HRPTTALVHLDRIKFNIEQVQHHIPKAAKTFAVVKANAYGHGAVQVAKAIQKQ-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L  + P +  +    N+   ++ +                
Sbjct: 65  SNLDEALELRQAGLNDFILILGVLLPEEVALAKKENITITVADLDWFDKVQTENIDLAGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VD+G  R+G+      +       K    ++ I +H A AD+ S+   S QLE F
Sbjct: 125 SVHVKVDSGMGRIGVRSTAEANQLIAGLQKAGATVNGIFTHFATADEASTVKFSQQLEMF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
            TLIS       ++   +S+  +   +      R GI +YG     N     + ++  + 
Sbjct: 185 TTLISQLDYKPQTVHASNSATSIWHSDTVMNAVRLGIVMYGLNPSGNALELPYEVKPALE 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG+ V YG     ++  +I    +GYADG+   L G            
Sbjct: 245 LTSALVQVKEVQAGDTVGYGATYTASQAEIIGTVPVGYADGWTRDLQGF----------- 293

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G+   I+G+++MD     +  +  +  G  + + G D    I   DVA    T 
Sbjct: 294 -HVLVNGHYCEIVGRVSMDQITIRLPKAYPL--GTKVTLIGQDGHETISATDVAEKRETI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  I  R  + Y
Sbjct: 351 NYEVLCLISDRVPRKY 366


>gi|50085519|ref|YP_047029.1| alanine racemase 1, biosynthetic [Acinetobacter sp. ADP1]
 gi|49531495|emb|CAG69207.1| alanine racemase 1, biosynthetic [Acinetobacter sp. ADP1]
          Length = 358

 Score =  258 bits (660), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 22/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + ID  AL+ N + +  L+ +A+  ++VK NAYG G +    AL       F V  
Sbjct: 2   RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALET--TDSFGVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFYSKLMSCGV--S 121
           + E +++R       I ++ G+    E  I  + NL  V+    Q+ +  +  +  +   
Sbjct: 60  LAEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQK 119

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++++G NRLG    E ++      ++      ++  H A AD P   +N  Q+++
Sbjct: 120 LKVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGFHC--VLTMHFANADVPDHPMNQRQIDQ 177

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTVVTA 238
             T+ +    IE S  +S+ I   P  HF   RPGI LYG +    ++      + V+  
Sbjct: 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A I+ +    AGE + YG       D  +A+ +IGY DGYP                  
Sbjct: 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAF-----------IAQN 286

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              +   + PI+G+++MDM   D+TD   I +   I+++G    +D+VA A+GT  Y+LL
Sbjct: 287 FVALGQQLFPIVGRVSMDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELL 345

Query: 359 VRIGTRYAK 367
            R+  R  +
Sbjct: 346 CRLSNRPIR 354


>gi|145225510|ref|YP_001136188.1| alanine racemase [Mycobacterium gilvum PYR-GCK]
 gi|145217996|gb|ABP47400.1| alanine racemase [Mycobacterium gilvum PYR-GCK]
          Length = 383

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 152/384 (39%), Gaps = 29/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M++       IDL A+ +N   +   +G A   AVVK + YG G   +A A   AG  + 
Sbjct: 9   MNT---PSAVIDLDAIAHNVGVLRDRAGRAAVMAVVKADGYGHGATAVARAALAAGATNL 65

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCG 119
            V +++E + LR     A +                 ++   +SS  Q       +   G
Sbjct: 66  GVATLDEALSLRRDGVTAPVLSWLHPPGTDFTPAVQADIEVALSSRRQLDDLLRAVARTG 125

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLII---SHLACADDPSSHVNS 176
            +    ++ DTG +R G+S  +           +      +    SHLA  D P    N 
Sbjct: 126 RTATVTVKADTGLSRNGVSPADHPGLVSALARAQTDGAVTVHGLMSHLAHGDVPDHPFND 185

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SH 230
            Q  R   + S  +          L +S   L  P+  F + RPGI++YG T    +   
Sbjct: 186 EQARRLTEMASEARSAGVAYDVVHLCNSPAALTRPDLAFDMVRPGIAVYGQTPIPERGDM 245

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +T +  + L+R   AG+ VSYG      RD+ +A+   GYADG    LS      
Sbjct: 246 GLRPAMTVKCPVALVRSVRAGDGVSYGHTWLAPRDTTLALIPAGYADGVFRALSNRF--- 302

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDD 345
                   +  I G   P +G++ MD  + D+      +  GD   +FGP    +    D
Sbjct: 303 --------EVTINGRRYPNVGRVCMDQFVVDLGPGPVDVAEGDDAILFGPGDDGEPTAQD 354

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A   GT NY+++     R  + Y
Sbjct: 355 WADLLGTINYEVVTSPRGRIVRGY 378


>gi|229489364|ref|ZP_04383227.1| alanine racemase [Rhodococcus erythropolis SK121]
 gi|229323461|gb|EEN89219.1| alanine racemase [Rhodococcus erythropolis SK121]
          Length = 400

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 159/378 (42%), Gaps = 26/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               +DL A+ +N   +   +G+A   AV+K + Y  G   +A    +AG ++  VT++ 
Sbjct: 28  TEAVVDLDAIAHNVRVLREFAGDAALMAVIKADGYNHGAVAVARTALSAGARELGVTTIA 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E + LR     A +                +++   +SS   L          G      
Sbjct: 88  EALVLREAGITAPVLAWLHGVDADFASAIRSDVEIGVSSPRHLAAVVGAARVLGQQATVT 147

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERF 182
           L+VDTG NR G+S  E      +    +         + SHLA +D+P   V  +Q +R 
Sbjct: 148 LKVDTGLNRNGVSRTEWPQMLDDLATARDEGTIRLRGVFSHLAHSDEPHHDVIDMQKQRL 207

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
              ++  +          L++S+  +  P+  F + RPGI++YG +         ++  +
Sbjct: 208 IDAVADVRARGFDPEVVHLSNSAATVTRPDLRFDMVRPGIAIYGLSPVPELGDFGLRPAM 267

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A++IL++K  AGE VSYG Q     D+ +A+  +GYADG   +LSG           
Sbjct: 268 TLRAKVILVKKVAAGEGVSYGHQWVAPHDTTLALLPVGYADGLSRSLSGKF--------- 318

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             +  + G     +G+I MD  + D+  D   +  GD    FG     +      A    
Sbjct: 319 --EVQLGGKRRQAVGRICMDQVLVDLGPDGDGVREGDTAIFFGNGDHGEPNAQAWADVLD 376

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+++  I  R  + Y
Sbjct: 377 TIHYEVVTGIRGRTVRTY 394


>gi|303234171|ref|ZP_07320817.1| alanine racemase [Finegoldia magna BVS033A4]
 gi|302494712|gb|EFL54472.1| alanine racemase [Finegoldia magna BVS033A4]
          Length = 391

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 96/379 (25%), Positives = 154/379 (40%), Gaps = 28/379 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LK+DL  LK+N+  +  +S   +  AVVK NAYG G   I   L   G+  F V+++ E 
Sbjct: 8   LKVDLDKLKHNYKEIKNISNLVKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQ 127
           ++LR       I +L  I     ++    N+   +         + +           ++
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 128 VDTGFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           +DTG  RLG        + L+     +      L  I SH + AD         Q   + 
Sbjct: 128 IDTGMTRLGFQVRLDHDKCLEEIFKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYNTYI 187

Query: 184 TLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTV 235
             +   +     +     ++    +   Y   + R GI LYG         N    ++ +
Sbjct: 188 GFMIDVENRGITVPIKHIANDAGAIIHGYFLDMIRCGIGLYGYHASDYVRENSRLNLEEI 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    + +I+    G  + YG       ++++A A IGYADGYPL LS           
Sbjct: 248 SSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I G    ILGK+ MD  M D+T    ++VGD + +FG D    I L ++A  + 
Sbjct: 298 -KAYVIINGKKAKILGKVCMDQIMIDVTYIRDVKVGDKVLLFGKDDMGEISLYELAEMAN 356

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T  Y+LL R+  R  + YT
Sbjct: 357 TNVYELLCRVTMRIPRIYT 375


>gi|149021206|ref|ZP_01835452.1| alanine racemase [Streptococcus pneumoniae SP23-BS72]
 gi|147930307|gb|EDK81291.1| alanine racemase [Streptococcus pneumoniae SP23-BS72]
          Length = 367

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 81/376 (21%), Positives = 155/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVKANAYGHGAVAVAKAIQD-DVNGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G      ++   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLKIDSGMGRIGFREASEVEQAQDLLQQHGVRVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ I+   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHIKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKPYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|160872424|ref|ZP_02062556.1| alanine racemase [Rickettsiella grylli]
 gi|159121223|gb|EDP46561.1| alanine racemase [Rickettsiella grylli]
          Length = 367

 Score =  258 bits (660), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 89/363 (24%), Positives = 163/363 (44%), Gaps = 17/363 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++++L AL +N   +  ++  ++  A+VK NAYG G   IA AL +  +  F V+
Sbjct: 2   SRPFTVELNLGALCHNVKRVRDIAPRSKLLAMVKANAYGHGLLPIAKALTD--IDGFGVS 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             EE + LR    + RI ++ GI    E  +     +  +       +            
Sbjct: 60  CSEEALYLRQAGLKQRIVLMEGIFSQDEISLLTDYELDTVIHDHHQLYLLSKHPLPRKVN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NRLG S  +               +  +++H + AD+  +     Q++ F 
Sbjct: 120 VWLKINTGMNRLGFSPNDFDAVLDKLSRHAWLNIVCVMTHFSNADNIRNTTTKNQIKLFE 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
             +  Y     SLA+S+ IL  P+ H    RPG+ LYG +   N     + ++ V+T ++
Sbjct: 180 QTLKGY-PFPTSLANSAAILASPHVHADWVRPGLMLYGVSPFSNSSGAHYGLKPVMTLKS 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I++   G+ V Y G     +   +   AIGY DGYP            S   G   
Sbjct: 239 EIISIQQLKKGDKVGYRGTWISPQSLRVGTVAIGYGDGYP-----------YSAKSGTPI 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G ++MDM   ++ + L  ++GD + ++G  + ++ +A  + +  Y+LL  
Sbjct: 288 LVNGKLTELIGHVSMDMLTVNLLNQLETKIGDSVVLWGAGLPVEQIAKRTSSFCYELLCG 347

Query: 361 IGT 363
           I  
Sbjct: 348 INR 350


>gi|295425675|ref|ZP_06818362.1| alanine racemase [Lactobacillus amylolyticus DSM 11664]
 gi|295064691|gb|EFG55612.1| alanine racemase [Lactobacillus amylolyticus DSM 11664]
          Length = 376

 Score =  258 bits (659), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 78/382 (20%), Positives = 147/382 (38%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++++L A+K N  + M  L    +  AVVK N YG G   +A     AG   F V
Sbjct: 6   HRPAVVRVNLGAIKQNIDNEMKHLRPGQKLFAVVKANGYGHGAVPVAKVAEKAGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++EG++LR       I VL  + P    I    ++   + ++  L    K +    + 
Sbjct: 66  AILDEGLELRKADIVKPILVLGVVSPEYAPIAAVNDISLTVPNLKWLKQAEKYLKKENLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G S  +     +    K        + +H A AD         Q+ 
Sbjct: 126 LKIHLGIDSGMGRIGFSEDDEFIAANKFLEKNDSFFVEGMFAHFASADSSDDSYFKKQVA 185

Query: 181 RFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F+ +            +A+++  +   + H  L R GI +YG     N   P       
Sbjct: 186 KFKHMQDLLTVHPKWIHVANTAASIFDKDIHSDLVRFGIGIYGLNPSSNPDSPDLKADIA 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++  + +  ++    G+ V YG       D++I    +GYADG+     G      
Sbjct: 246 LKPALSFVSELTHVKTIHKGDGVGYGSTFVADHDTIIGTVPVGYADGWIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVA 347
                  K  +     PI+G++ MD  M ++ + + +  G  + +   +      +   A
Sbjct: 301 -------KVKVGDQYCPIVGRVCMDQFMVEMPEKMPV--GTKVVLISDNPNDPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLSDRLPREY 373


>gi|315445863|ref|YP_004078742.1| alanine racemase [Mycobacterium sp. Spyr1]
 gi|315264166|gb|ADU00908.1| alanine racemase [Mycobacterium sp. Spyr1]
          Length = 375

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 152/384 (39%), Gaps = 29/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M++       IDL A+ +N   +   +G A   AVVK + YG G   +A A   AG  + 
Sbjct: 1   MNT---PSAVIDLDAIAHNVGVLRDRAGRAAVMAVVKADGYGHGATAVARAALAAGATNL 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCG 119
            V +++E + LR     A +                 ++   +SS  Q       +   G
Sbjct: 58  GVATLDEALSLRRDGVTAPVLSWLHPPGTDFTPAVQADIEVALSSRRQLDDLLRAVARTG 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLII---SHLACADDPSSHVNS 176
            +    ++ DTG +R G+S  +           +      +    SHLA  D P    N 
Sbjct: 118 RTATVTVKADTGLSRNGVSPADHPGLVSALARAQTDGAVTVHGLMSHLAHGDVPDHPFND 177

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SH 230
            Q  R   + S  +          L +S   L  P+  F + RPGI++YG T    +   
Sbjct: 178 EQARRLTEMASEARSAGVAYDVVHLCNSPAALTRPDLAFDMVRPGIAVYGQTPIPERGDM 237

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +T +  + L+R   AG+ VSYG      RD+ +A+   GYADG    LS      
Sbjct: 238 GLRPAMTVKCPVALVRSVRAGDGVSYGHTWLAPRDTTLALIPAGYADGVFRALSNRF--- 294

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDD 345
                   +  I G   P +G++ MD  + D+      +  GD   +FGP    +    D
Sbjct: 295 --------EVTINGRRYPNVGRVCMDQFVVDLGPGPVDVAEGDDAILFGPGDDGEPTAQD 346

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A   GT NY+++     R  + Y
Sbjct: 347 WADLLGTINYEVVTSPRGRIVRGY 370


>gi|191639471|ref|YP_001988637.1| Alanine racemase [Lactobacillus casei BL23]
 gi|226711049|sp|B3WAR0|ALR_LACCB RecName: Full=Alanine racemase
 gi|190713773|emb|CAQ67779.1| Alanine racemase [Lactobacillus casei BL23]
 gi|327383565|gb|AEA55041.1| Possible alanine racemase [Lactobacillus casei LC2W]
 gi|327386757|gb|AEA58231.1| Possible alanine racemase [Lactobacillus casei BD-II]
          Length = 378

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 148/379 (39%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNIQHEVARLKKQTQLFAVVKADAYGHGMLRVARVAKAAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SS   L     ++      P
Sbjct: 67  ILDEALGLRKADYSEPVLVLGIVPSQYAAIAAAQTISLPVSSTEWLEQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
                L +DTG  R+G +  +AL            Q  +    +H A AD P       Q
Sbjct: 127 PLRIHLALDTGMGRIGFTEDQALKTAVAFVEAHPKQFVIEGVFTHFATADAPDDTYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           + +F  L++        +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VNKFNHLVNLLPSRPRYVHVSNSATSLWHAACNGNMIRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   +   D  I    IGYADG+   L G       
Sbjct: 247 EPALSLESELTYCKQVHAGDGISYGVTYRAKGDEFIGTVPIGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGQYCEIVGRICMDQFMIRLPKAYPA--GTKVVLVGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   +  R  +
Sbjct: 353 YSKTIHYEIACNLTPRLKR 371


>gi|170780960|ref|YP_001709292.1| putative alanine racemase fusion protein [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169155528|emb|CAQ00640.1| putative alanine racemase fusion protein [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 578

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 163/374 (43%), Gaps = 25/374 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  IDL A+++N  ++ AL+  ART   VK +AYG G  ++A A   +G +   V  V  
Sbjct: 19  RAVIDLDAIRHNVRTLAALAAPARTMVAVKADAYGHGALQVARAALESGAESLAVLDVAS 78

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
            V+LR     AR+           ++  +  +   +S++ +L    +   + G+     L
Sbjct: 79  AVELRRAGIDARLLAWLHGVDTDFRVAVEEEIDLGVSALWELKRIAAAGRATGIRARVHL 138

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG +R G + +   D    +          + +  +   D S   +   L RFR  +
Sbjct: 139 KADTGLSRNGATPELWPDLVRAAVAADSAGELTLHALWSHLADASPEDDDAALARFREAV 198

Query: 187 S-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTA 238
                   + +E  LA+SS  +  P   F + R GI++YG +   +   +   +   +T 
Sbjct: 199 RVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPAMTL 258

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA ++ +++  AG  VSYG   +    S + +  +GYADG P   +   S          
Sbjct: 259 EADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRAS---------- 308

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
              + G   P+ G+I MD  + D+ D   +EVGD   I GP    +   ++ A  + T  
Sbjct: 309 -VLLNGRRFPVAGRIAMDQLVLDVGDLP-VEVGDTAVILGPGDRGEPTAEEWAGWAETIG 366

Query: 355 YDLLVRIGTRYAKF 368
            +++ R+G R  + 
Sbjct: 367 DEIVTRVGPRVDRV 380


>gi|300742014|ref|ZP_07072035.1| alanine racemase [Rothia dentocariosa M567]
 gi|300381199|gb|EFJ77761.1| alanine racemase [Rothia dentocariosa M567]
          Length = 437

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/387 (22%), Positives = 150/387 (38%), Gaps = 28/387 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL AL++N   +  + G  +  AVVK +AYG G   +A ++  AG     V  V E 
Sbjct: 22  AIIDLNALEHNTRVLKDMIGERKLIAVVKADAYGHGAYPVARSVLEAGADILGVVHVTEA 81

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR     A I               + ++I   S                     L+V
Sbjct: 82  LELRSEGITAPIIAWLHTPQTDFDEALEADIILGASGWDLEAIAEAANRTKKRARVHLKV 141

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G + ++       +   +   L ++  I SHLA AD+P     + Q+ R    
Sbjct: 142 DTGLGRNGSTFEDWPALVARALELEAAGLVRIEGIFSHLAVADEPERPETARQIARLNEF 201

Query: 186 --ISHYKGIEASLASSSG-----------ILLGPNYHFQLTRPGISLYGGTDKIN---KS 229
             ++   G+   L   +                        R GI+LYG +       K 
Sbjct: 202 ATVARSAGLTPELVHLANSPGTITGASPLYNTNEAVLADAVRCGIALYGLSPLAGVSSKD 261

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T    +  +++  AG+ VSYG +    + + + +  +GYADG P    G    
Sbjct: 262 LNLRPVMTLGTHVCNVKEVPAGQGVSYGLRYSTDKPTTLVLIPLGYADGVPRIAEGAPVR 321

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV-----GDYIQIF--GPDIK 342
             P          +     ++G+I MD  + D+ +    +      G    +F  G +  
Sbjct: 322 IYPRADAANPV--EPRTYRVVGRIAMDQLVVDLEEPGLADPARGILGGSAVLFGSGDNPP 379

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++ A A+ T NY+++ RI  R  + Y
Sbjct: 380 VEEWAAAAQTINYEIVTRISPRVIRIY 406


>gi|315224260|ref|ZP_07866097.1| alanine racemase [Capnocytophaga ochracea F0287]
 gi|314945763|gb|EFS97775.1| alanine racemase [Capnocytophaga ochracea F0287]
          Length = 369

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 148/379 (39%), Gaps = 23/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M + E + L+I+LTAL+ N   +   L        VVK ++YG     IA  L   G   
Sbjct: 1   MKTEETV-LEINLTALEKNVLYLKSRLKPTTLFLGVVKASSYGNNSVPIALHLQKKGLAN 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V    EG  LR       I VL+   P     I    L P + S      + +    
Sbjct: 60  YFAVAYTSEGKALREAGITLPILVLHP-QPINFDDIVKYKLEPTLYSQRITKLFLEYAEK 118

Query: 119 GV--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVN 175
                +P  L+ +TG NRLG  L E         N     +    SHLA ++D +     
Sbjct: 119 HHLVKYPVHLKCNTGLNRLGFDLNEIDQELTLLKNNTTVTVKTAYSHLAASEDMNEKEFT 178

Query: 176 SVQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q++ F              +     ++SGIL   +  F + R GI +YG  +      
Sbjct: 179 ENQIKTFIAFQEKINKTFSHKVIYHQCNTSGILNYAHAQFDMVRCGIGMYGFANDAQLQQ 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +  ++T ++ I  I     G+ + Y         +  A   +G+ADG            
Sbjct: 239 YLTPIMTLKSVISQIHTLQVGDSLGYNRGYIADHITKTATIPVGHADGINRIYG------ 292

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                  G  FI G   PI+G + MDM + D+T+    E G  + +F  D   + +A ++
Sbjct: 293 ----KGKGFVFINGKKAPIIGNVCMDMILVDVTNIP-CEEGGEVIVFDKDHTAETLAESA 347

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+L+  +  R  + Y
Sbjct: 348 GTISYELITSMAHRIKRVY 366


>gi|116495991|ref|YP_807725.1| alanine racemase [Lactobacillus casei ATCC 334]
 gi|122262609|sp|Q034T9|ALR_LACC3 RecName: Full=Alanine racemase
 gi|116106141|gb|ABJ71283.1| alanine racemase [Lactobacillus casei ATCC 334]
          Length = 378

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 149/379 (39%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNIQHEVARLKKQTQLFAVVKADAYGHGMLRVARVAKAAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SS   L     ++      P
Sbjct: 67  ILDEALGLRKADYSEPVLVLGIVPSQYAAIAAAQTISLPVSSTEWLEQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
                L +DTG  R+G +  +AL            Q  +    +H A AD P       Q
Sbjct: 127 PLRIHLALDTGMGRIGFTEDQALKTAVAFVEAHPKQFVIEGVFTHFATADAPDDTYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           +++F  L++        +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VDKFNHLVNLLPSRPRYVHVSNSATSLWHAACNGNMIRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ ++ +   ++  AG+ +SYG   +   D  I    IGYADG+   L G       
Sbjct: 247 EPALSLKSELTYCKQVHAGDGISYGVTYRAKGDEFIGTVPIGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGQYCEIVGRICMDQFMIRLPKAYPA--GTKVVLVGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   +  R  +
Sbjct: 353 YSKTIHYEIACNLTPRLKR 371


>gi|83720249|ref|YP_442531.1| alanine racemase [Burkholderia thailandensis E264]
 gi|167581458|ref|ZP_02374332.1| alanine racemase [Burkholderia thailandensis TXDOH]
 gi|167619567|ref|ZP_02388198.1| alanine racemase [Burkholderia thailandensis Bt4]
 gi|257138740|ref|ZP_05587002.1| alanine racemase [Burkholderia thailandensis E264]
 gi|83654074|gb|ABC38137.1| alanine racemase [Burkholderia thailandensis E264]
          Length = 356

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/366 (24%), Positives = 149/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +  ++  A+VK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLTVVRRHAAQSKVWAIVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTAVHNDEQMRMLETARLSKPVNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + Q+  F  
Sbjct: 121 QLKMNSGMNRLGYAPEKFRAAWERARACPGIGQITLMTHFSDADGERG--VAEQMATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                 G   SLA+S+ +L  P+ HF   RPGI LYG +   +        +Q  +T  +
Sbjct: 179 GAQGIAGAR-SLANSAAVLWHPSAHFDWVRPGIMLYGASPSGHSADIAGKGLQPTMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTLAKGQAVGYGSVFVAEDTMRIGVVACGYADGYPRIA-----------PEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA    T  Y+L+  
Sbjct: 287 VVDGVRTRIVGRVSMDMLTVDLTPVPQAGVGARVELWGETLPIDDVAARCMTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|257785044|ref|YP_003180261.1| alanine racemase [Atopobium parvulum DSM 20469]
 gi|257473551|gb|ACV51670.1| alanine racemase [Atopobium parvulum DSM 20469]
          Length = 384

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 33/388 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           + +  ++IDL+A+++N  +    L+   +   VVK +AYG G  + A A+ + G   F V
Sbjct: 7   DRWAWIEIDLSAVRHNVKAFKAQLNRGVKLMCVVKADAYGHGAAQCAKAMQSVGADQFAV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVS 121
            +V+EGV+LR    ++ I VL          +   +++P + +V   L +     +    
Sbjct: 67  ATVDEGVELRCSGIESPILVLSEPPVTSIPDLVRFDIMPSVYTVDFALAYGEASAAANKV 126

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
             Y L +DTG  R+G+  ++ L+   +    +  + +   +H A AD   +    +Q+ R
Sbjct: 127 GRYHLAIDTGMTRIGVRREDLLEVRGSIDFHRGLECAGTFTHFATADVLDNWDFDLQVNR 186

Query: 182 FRTLISHYKGIEASL-----ASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQT 234
           F   I+  K     L      ++ G +L  +  F + R GI LYG            +Q 
Sbjct: 187 FVEAITALKNAGYELGLVHADNTPGTILHKDIQFDMVRVGIGLYGLHPSKLTIPRIDLQL 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPS 293
           V++   R+  +     G+ V YG   ++ R++  +A   IGYADG    LS         
Sbjct: 247 VMSVRGRVTRVVYPAVGDGVGYGMTWRVPRNNIQVATVPIGYADGLARNLSNRMD----- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDIT--------DSLSIEVGDYIQIFGPD----I 341
                    +G  V  +G I MD  M  +             I  GD + + G D    I
Sbjct: 302 ------VLARGSRVRQVGNICMDQFMIAVDTTGARANKPVYEICYGDVVTLIGKDGDQEI 355

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +D++A    T NY+++   G R  K Y
Sbjct: 356 TVDEMADLRETINYEVVCNFGARLDKVY 383


>gi|217967880|ref|YP_002353386.1| alanine racemase [Dictyoglomus turgidum DSM 6724]
 gi|217336979|gb|ACK42772.1| alanine racemase [Dictyoglomus turgidum DSM 6724]
          Length = 378

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 28/375 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVT 63
               +I+L+ L +N   +    G      AVVK +AYG G + I+  L   A +  F V 
Sbjct: 5   LAWREINLSFLLDNLKVIKEKVGGKVDVIAVVKADAYGHGAKVISLFLQKYANINTFAVA 64

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            ++EG+ LR      +I VL           F+  L PVIS +  L        +     
Sbjct: 65  HIDEGIFLRKIGVNKKILVLSPQLKSSIPYYFEYELTPVISDIEFLDELGKYSNNKDKKL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L  DTG  R G    E+ +            L  I SHL+  ++     N  Q + F
Sbjct: 125 KVHLIFDTGMGREGFLPSESEEILKLLRRYPNLILEGISSHLSNPENKKDPYNIFQKKLF 184

Query: 183 RTLISHYKG--IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             + + +K   +    +++ GI   P +HF   RPGISLYG  DK+ K      V+  +A
Sbjct: 185 YDIYNQFKDEDLVFHFSNTGGIFNFPEFHFNAVRPGISLYGYGDKLLKP-----VMEIKA 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI L+++   G  V YG      + + IA+  +GYADGY   LS             G+ 
Sbjct: 240 RITLVKELPEGWGVGYGHTFMTEKSTKIAIVPLGYADGYRRDLSN-----------KGRV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYD 356
            + G    I+G+++MD    DITD   ++ GD + + G +    +   ++A+ S T  Y+
Sbjct: 289 IVNGEYCKIIGRVSMDQFTIDITD-KEVKRGDLVTVMGRENEKMVDAQELAILSNTIPYE 347

Query: 357 LLVRIG--TRYAKFY 369
           +L   G   R    Y
Sbjct: 348 ILTGFGSAKRLKSIY 362


>gi|163741439|ref|ZP_02148830.1| alanine racemase [Phaeobacter gallaeciensis 2.10]
 gi|161385173|gb|EDQ09551.1| alanine racemase [Phaeobacter gallaeciensis 2.10]
          Length = 345

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 131/365 (35%), Positives = 192/365 (52%), Gaps = 25/365 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL ++L AL  NW +++AL+ N  TAAVVK N YGL   ++  AL NAG ++FFV   E
Sbjct: 4   ARLTLNLDALVTNWRNLDALT-NCETAAVVKANGYGLDAGRVGKALANAGARNFFVAMAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G   G  K++ D  L P+++S+ Q+  + + +     HP+ 
Sbjct: 63  EGVALRRAIGPGPGISVFAGHMEGDAKLLRDFQLTPMLNSLDQMLRHFESL---PGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+DTG NRLG+   E       + ++      L++SHLACAD+ +  +NS QL+ F   
Sbjct: 120 VQLDTGMNRLGMEAAEWAAVRDIALSQ---GPVLLMSHLACADETTHPMNSHQLQNFLD- 175

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
           ++    +  SLA++ G+LLG NYHF L RPGI LYGG    +       V   +  +I I
Sbjct: 176 LTEGLDLPRSLAATGGLLLGRNYHFDLCRPGIGLYGGQPYGDA----LPVAQLDLPVIQI 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG      R S IA  A GYADG    L               + +  G 
Sbjct: 232 RSLDPGETVGYGNSWAAQRPSRIATVAAGYADGLHRALGSGQI----------QVYAGGT 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+++MD+   D+TD        ++ I      +D +A A+GT  Y++L  +G+RY
Sbjct: 282 PCPVVGRVSMDLITVDVTDLGDDP--SHLAILNERQTVDTLADAAGTIGYEILTSLGSRY 339

Query: 366 AKFYT 370
           A+ YT
Sbjct: 340 ARSYT 344


>gi|254509706|ref|ZP_05121773.1| alanine racemase [Rhodobacteraceae bacterium KLH11]
 gi|221533417|gb|EEE36405.1| alanine racemase [Rhodobacteraceae bacterium KLH11]
          Length = 405

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 186/362 (51%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L I+L AL  NW +++A + N  T AVVK +AYGLG E +A AL   GV+ FFV + EEG
Sbjct: 67  LTINLHALAQNWQALDAGT-NVETGAVVKADAYGLGAEPVAWALAEEGVRKFFVAAAEEG 125

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R    P   + V  G   G   ++ + +L P+I+S  Q   + + +       + +Q
Sbjct: 126 ATVREAVGPGPMVAVFSGHMEGDADLLRNHDLTPLINSPEQ---FKRHLQALPDRKFGIQ 182

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL   +  +  H++         +++SHLAC+D+P   +N  QL+ F+ +  
Sbjct: 183 LDTGMNRLGLEPSDWAELRHDALKL---DPLVVMSHLACSDEPEHPMNKQQLQTFKQMTD 239

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ G LLG  YHF   RPGI LYGG            VVT +  II +R 
Sbjct: 240 G-VEVPRSLAATGGTLLGSEYHFDFCRPGIGLYGGMPFAGAK----PVVTVDLPIIQVRD 294

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG   K  R S IA  A GYADG    + G           G   F      
Sbjct: 295 VAVGETVGYGNAWKARRPSKIATVAAGYADGLHRAIGG-----------GIDAFAGDQPC 343

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+I+MD+   D+TD       + ++I      +DD+A A+GT  Y++L  +G+RY++
Sbjct: 344 PVVGRISMDLITVDVTDLP--YTPERLRILNGHQTVDDLAEAAGTIGYEILTSLGSRYSR 401

Query: 368 FY 369
            Y
Sbjct: 402 GY 403


>gi|256818882|ref|YP_003140161.1| alanine racemase [Capnocytophaga ochracea DSM 7271]
 gi|256580465|gb|ACU91600.1| alanine racemase [Capnocytophaga ochracea DSM 7271]
          Length = 369

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 149/379 (39%), Gaps = 23/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M + E + L+I+LTAL+ N   +   L        VVK ++YG     IA  L   G   
Sbjct: 1   MKTEETV-LEINLTALEKNVLYLKSRLKPTTLFLGVVKASSYGNNSVPIALHLQKKGLAN 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V    EG  LR       I VL+   P     I    L P + S      + +    
Sbjct: 60  YFAVAYTSEGKALREAGITLPILVLHP-QPINFDDIVKYKLEPTLYSQRITKLFLEYAEK 118

Query: 119 GV--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVN 175
                +P  L+ +TG NRLG  L E  +      N     +    SHLA ++D +     
Sbjct: 119 HHLVKYPVHLKCNTGLNRLGFDLNEIDEVLALLKNNTTVTVKTAYSHLAASEDMNEKEFT 178

Query: 176 SVQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q++ F              +     ++SGIL   +  F + R GI +YG  +      
Sbjct: 179 ENQIKTFIAFQEKINKTFSHKVIYHQCNTSGILNYAHAQFDMVRCGIGMYGFANDAQLQQ 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +  ++T ++ I  I     G+ + Y         +  A   +G+ADG            
Sbjct: 239 YLTPIMTLKSVISQIHTLQVGDSLGYNRGYIADHITKTATIPVGHADGINRIYG------ 292

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                  G  FI G   PI+G + MDM + D+T+    E G  + +F  D   + +A ++
Sbjct: 293 ----KGKGFVFINGKKAPIIGNVCMDMILVDVTNIP-CEEGGEVIVFDKDHTAETLAESA 347

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+L+  +  R  + Y
Sbjct: 348 GTISYELITSMAHRIKRVY 366


>gi|257126593|ref|YP_003164707.1| alanine racemase [Leptotrichia buccalis C-1013-b]
 gi|257050532|gb|ACV39716.1| alanine racemase [Leptotrichia buccalis C-1013-b]
          Length = 365

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 151/371 (40%), Gaps = 21/371 (5%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I++  L +N   +  +    +  AV+K +AYG G  KI  AL   G+++F V + +E
Sbjct: 4   WAEININNLYSNIDEIEKIVAKDKIIAVIKADAYGHGMLKICDALIKKGIKNFAVATSDE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            +K++       + +L  +      +I D N+  +++   ++ +  K             
Sbjct: 64  ALKIKELHNDIMVLILGPVENEYMDLIADKNIYFMVTDFEEIEYLEKTGGKKGKTTDVFI 123

Query: 128 -VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            +DTG  R+G    E  D  +           + I     + D       +Q  +F+ + 
Sbjct: 124 KIDTGMGRVGFQESEVEDL-NKILKNSSHINPIGIFSHFSSSDSDKDYTKLQESKFKAMC 182

Query: 187 SHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGT-DKINKSHPMQTVVTAEA 240
                         L +S G L   +      R GI LYGG  D+    +  + V++  A
Sbjct: 183 EKISSGIPSIKYRHLHNSFGTLKFQDSIEDFVRVGIILYGGVIDEETFPYKFKPVMSLLA 242

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I  I+       +SYG   K       A  +IGYADG    LS             G  
Sbjct: 243 KISYIKTLKEDSFISYGNTYKGKAGGTYATVSIGYADGVRRDLSN-----------KGYV 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           F KG+   I+G++ MD  M  + D L    + GD ++ FG +I + +VA    T +Y+++
Sbjct: 292 FYKGHKCEIVGRVCMDQLMILLPDELKDMAKKGDIVEFFGENISVVEVADLCNTISYEIM 351

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 352 CGISQRVPRIY 362


>gi|148238739|ref|YP_001224126.1| alanine racemase [Synechococcus sp. WH 7803]
 gi|147847278|emb|CAK22829.1| Alanine racemase [Synechococcus sp. WH 7803]
          Length = 393

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 173/379 (45%), Gaps = 26/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   +++   A+++N  ++  L +      AVVK + YG G E +A A    G     V
Sbjct: 23  RQRAWMEVSAQAVESNARALRQLLAPGCALMAVVKADGYGHGAETVARAAICGGATSLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG++LR    +  + VL   I     +      L+P +SS+ +      L S  G 
Sbjct: 83  ATLQEGIELRRAGLELPVLVLGNLIQVEDLRACLHWQLMPTLSSMREALLCQNLASGSGR 142

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS----HVNS 176
                L++DTG  RLG   Q+    T          L  + SHLA AD   S     +  
Sbjct: 143 RFAVQLKLDTGMTRLGCDWQDGSRLTQAIQQLDQLILRGVYSHLALADGGPSGDAERITR 202

Query: 177 VQLERFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPM 232
           +Q ERF  +   ++   ++  LA+S+G L   + H    R G++LYG      +N++ P+
Sbjct: 203 LQQERFEAVTRAHRSDNLQFHLANSAGTLRDRSLHHDQVRVGLALYGHAPSEHLNQTVPL 262

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +  +AR+ LIR   AG  VSYG +   +R S +AV  IGYADG    LSG  +    
Sbjct: 263 EPAMGVKARVSLIRDVPAGVGVSYGHRFVTSRPSRLAVVGIGYADGVSRCLSGQIA---- 318

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                      G  +P +G ITMD  M D TD  +++VGD + + G D    I   D A 
Sbjct: 319 -------VLHAGRRLPQVGAITMDQLMVDATDHPTLDVGDVVTLLGSDGDAVIHPQDWAE 371

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S +  +++L     R  +
Sbjct: 372 LSDSIPWEVLCSFKHRLPR 390


>gi|308232460|ref|ZP_07664093.1| alanine racemase alr [Mycobacterium tuberculosis SUMu001]
 gi|308370262|ref|ZP_07420828.2| alanine racemase alr [Mycobacterium tuberculosis SUMu002]
 gi|308371343|ref|ZP_07424633.2| alanine racemase alr [Mycobacterium tuberculosis SUMu003]
 gi|308372542|ref|ZP_07667405.1| alanine racemase alr [Mycobacterium tuberculosis SUMu004]
 gi|308373739|ref|ZP_07433510.2| alanine racemase alr [Mycobacterium tuberculosis SUMu005]
 gi|308374873|ref|ZP_07667888.1| alanine racemase alr [Mycobacterium tuberculosis SUMu006]
 gi|308376117|ref|ZP_07446099.2| alanine racemase alr [Mycobacterium tuberculosis SUMu007]
 gi|308377347|ref|ZP_07441912.2| alanine racemase alr [Mycobacterium tuberculosis SUMu008]
 gi|308378321|ref|ZP_07482199.2| alanine racemase alr [Mycobacterium tuberculosis SUMu009]
 gi|308379509|ref|ZP_07486543.2| alanine racemase alr [Mycobacterium tuberculosis SUMu010]
 gi|308380696|ref|ZP_07669258.1| alanine racemase alr [Mycobacterium tuberculosis SUMu011]
 gi|308213938|gb|EFO73337.1| alanine racemase alr [Mycobacterium tuberculosis SUMu001]
 gi|308324884|gb|EFP13735.1| alanine racemase alr [Mycobacterium tuberculosis SUMu002]
 gi|308329065|gb|EFP17916.1| alanine racemase alr [Mycobacterium tuberculosis SUMu003]
 gi|308332926|gb|EFP21777.1| alanine racemase alr [Mycobacterium tuberculosis SUMu004]
 gi|308336536|gb|EFP25387.1| alanine racemase alr [Mycobacterium tuberculosis SUMu005]
 gi|308340412|gb|EFP29263.1| alanine racemase alr [Mycobacterium tuberculosis SUMu006]
 gi|308344272|gb|EFP33123.1| alanine racemase alr [Mycobacterium tuberculosis SUMu007]
 gi|308348222|gb|EFP37073.1| alanine racemase alr [Mycobacterium tuberculosis SUMu008]
 gi|308352946|gb|EFP41797.1| alanine racemase alr [Mycobacterium tuberculosis SUMu009]
 gi|308356810|gb|EFP45661.1| alanine racemase alr [Mycobacterium tuberculosis SUMu010]
 gi|308360758|gb|EFP49609.1| alanine racemase alr [Mycobacterium tuberculosis SUMu011]
          Length = 347

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/352 (26%), Positives = 146/352 (41%), Gaps = 26/352 (7%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            AVVK + YG G  ++A     AG  +  V +V+E + LR     A +            
Sbjct: 1   MAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALALRADGITAPVLAWLHPPGIDFG 60

Query: 93  IIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
                ++   +SS+ Q       +   G +    ++VDTG NR G+   +          
Sbjct: 61  PALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVDTGLNRNGVGPAQFPAMLTALRQ 120

Query: 152 KKLGQLSL---IISHLACADDPSSHVNSVQLERFRTLISHYKGIE-----ASLASSSGIL 203
                      ++SH+  AD P   +N VQ +RF   ++  +        A L++SS  +
Sbjct: 121 AMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFLAQAREQGVRFEVAHLSNSSATM 180

Query: 204 LGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTAEARIILIRKALAGELVSYGGQKKL 262
             P+  F L RPGI++YG +         +   +T +  + L++   AGE VSYG     
Sbjct: 181 ARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKCAVALVKSIRAGEGVSYGHTWIA 240

Query: 263 TRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI 322
            RD+ +A+  IGYADG   +L G             +  I G   P +G+I MD  M D+
Sbjct: 241 PRDTNLALLPIGYADGVFRSLGGRL-----------EVLINGRRCPGVGRICMDQFMVDL 289

Query: 323 TDSL-SIEVGDYIQIFGPDI----KLDDVALASGTTNYDLLVRIGTRYAKFY 369
                 +  GD   +FGP I       D A   GT +Y+++     R  + Y
Sbjct: 290 GPGPLDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY 341


>gi|116333170|ref|YP_794697.1| alanine racemase [Lactobacillus brevis ATCC 367]
 gi|122270141|sp|Q03T06|ALR_LACBA RecName: Full=Alanine racemase
 gi|116098517|gb|ABJ63666.1| alanine racemase [Lactobacillus brevis ATCC 367]
          Length = 373

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 84/380 (22%), Positives = 143/380 (37%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +L ID  AL +N  + +  L+       VVK N YG G  ++A     AG   F V
Sbjct: 6   HRPTQLVIDRQALHDNIQAEVTRLASGCELFMVVKANGYGHGAVQVAQVAKEAGATGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCG 119
             ++E ++LR       I VL    P    ++   +    +     +     Y  L    
Sbjct: 66  AILDEALELRAAGFNEPILVLGVTEPEDAPLMAQQHISATVAATDWLVAADAYLALAQPT 125

Query: 120 VSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L +DTG  R+G     E                  I +H A AD P       Q
Sbjct: 126 APLQVHLGLDTGMGRIGFKTTTELTTAVSYLATHATLNFEGIFTHFATADSPDETYFKQQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
           + +++TL +  K     +   +S+  L     +  + R G++ YG       I   + ++
Sbjct: 186 VAKWQTLTAALKERPRYVHVSNSATSLWHAACNDNMVRFGVAGYGLNPSGTAIPAPYALK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  ++++  ++ +AGE V YG      +   +    IGYADGY   L G        
Sbjct: 246 PALSLTSQLVHSKQVVAGESVGYGATYTAQQTEWVGTVPIGYADGYERRLQGF------- 298

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                   + G    I+G++ MD  M  +        G  + + G D    I L ++A  
Sbjct: 299 -----HVLVDGQACEIIGRVCMDQLMIRLPHDY--ARGTRVTLIGRDGDHVITLQEMADY 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y+L     +R  + Y
Sbjct: 352 CQTIHYELACGFTSRLPRVY 371


>gi|303232760|ref|ZP_07319445.1| alanine racemase [Atopobium vaginae PB189-T1-4]
 gi|302481246|gb|EFL44321.1| alanine racemase [Atopobium vaginae PB189-T1-4]
          Length = 386

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 169/387 (43%), Gaps = 33/387 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++++L A+++N  ++ +L +   +  A+VK +AYG G    A A+ +AG Q F V 
Sbjct: 9   RNAWMEVNLAAIRHNVRTIKSLMAPTCKLMAIVKADAYGHGAGVCARAMASAGAQQFGVA 68

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVSH 122
           +V+E ++LR       I +L         ++ + +++P V SS   L +    ++  +  
Sbjct: 69  TVQEALELRQSGIAQPIVLLSEPPVETIDLLLENDIMPGVTSSEFVLAYGECAIAHDMVG 128

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            Y L +DTG  R+G+  ++A++F       +    +   +H A AD         Q++RF
Sbjct: 129 KYHLALDTGMTRIGIPAEDAVEFRRLVDFHRGIVCAGTYTHFATADTIGDWDFRRQVQRF 188

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
              I      +         +++  +L P+  F + R GI+LYG     +  +   ++  
Sbjct: 189 TDAIRALHEAKLYPGIVHCDNTAATMLYPDIQFDMCRVGIALYGIHPAESTVELAELEPA 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSL-IAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++  ARI  +     G+ VSYG   ++    + IA   IGYADG   +LSG         
Sbjct: 249 MSIRARITRVANPRIGDGVSYGMTYRVNTPYMQIATIPIGYADGLSRSLSGEMD------ 302

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDI--------TDSLSIEVGDYIQIFGPD----IK 342
                  + G     +G+I MD  MF          T +  + VGD + I G D    I 
Sbjct: 303 -----VLVHGRRARQVGRICMDQCMFAYPLRSMTSSTMAPELAVGDVVTIMGSDKDEYIS 357

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
            D++     T  Y++L     R  + Y
Sbjct: 358 ADEIGQLRHTIAYEVLCNFSARLERVY 384


>gi|283457594|ref|YP_003362178.1| alanine racemase [Rothia mucilaginosa DY-18]
 gi|283133593|dbj|BAI64358.1| alanine racemase [Rothia mucilaginosa DY-18]
          Length = 437

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 30/391 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL AL++N   +  L G+    AV+K +AYG G   +A +   AG     V  V E 
Sbjct: 25  ATIDLDALEHNVRRLKELIGDRVLIAVIKADAYGHGAYPVARSAIAAGADLLGVVHVNEA 84

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR     A +           +      +   +S        +     G      L+ 
Sbjct: 85  LELRADGIDAPLMAWLHTPSTDFEAALQEKIRLGVSGWDLEAVAAAAECTGERAIVHLKA 144

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G +  +       + + +   L  +  I SHLA AD+P+    + Q++   T 
Sbjct: 145 DTGLGRNGATAADWPALVARAASLEDAGLITVEGIFSHLAVADEPTRAETAQQVDTLDTF 204

Query: 186 ISHYK--GIEASLASSSG-------ILLGPNYH----FQLTRPGISLYGGTDKIN---KS 229
           ++  +  G++  +   +         L G +          R G++LYG +       + 
Sbjct: 205 VAQAREAGLDPKIVHLANSPATLTASLEGWDTEERLLGDGVRCGLALYGLSPLPEVTAED 264

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+T  + I  +++  AG+ VSYG +    + + +A+  +GYADG P         
Sbjct: 265 LGLKPVMTVGSYIAAVKEVPAGQGVSYGLRYHTPKATTLALVPLGYADGVPRIAENAPVR 324

Query: 290 HSPSVFLGGKGFI----KGYMVPILGKITMDMTMFDITD----SLSIE-VGDYIQIF--G 338
             P       G +    +G    ++G+I MD  + D+ +      ++  +G    +F  G
Sbjct: 325 IYPGAQNAENGSVPNNAEGKTYRVVGRIAMDQMVVDLGEPGLSDPALGYLGAPAILFGAG 384

Query: 339 PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +  +++ A A+ T NY+++ RI +R  + Y
Sbjct: 385 ENPPVEEWADAAQTINYEIVTRISSRVERLY 415


>gi|223938778|ref|ZP_03630666.1| alanine racemase [bacterium Ellin514]
 gi|223892476|gb|EEF58949.1| alanine racemase [bacterium Ellin514]
          Length = 392

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 165/379 (43%), Gaps = 25/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                ++IDL  L+ N+  +    +   +   VVKD AYG G  K+A A   AGV+   +
Sbjct: 24  RRPAWIEIDLKQLRRNYEVINREKTKGLKLLLVVKDEAYGHGGLKVAKAALEAGVEFLSL 83

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
           ++++E + LR      RI +L      +       NL   + S   +    KL    G  
Sbjct: 84  SNLDEAMALRGGGIDTRILLLGERQDEELPWCVAQNLTCCVDSQEVVLKLGKLAEKVGRP 143

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  L+++TG NR G+   EAL       + K  Q   ++SH A +D+      ++QLER
Sbjct: 144 VPVHLKINTGMNRYGVRWTEALALVEFILSTKSLQFEGVLSHFAMSDELDKTFANLQLER 203

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQT 234
           F+ +++             + +S G L  P  HF + R G+  YG        +   +  
Sbjct: 204 FKMVLAELADKSIHVKYRHICNSGGFLDLPQAHFDMVRIGLLQYGVYPSQVCRRIPGIAP 263

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++ +ARI   +   A ++V YG + K      I V  IGY DGYP             +
Sbjct: 264 VMSVKARIAAFQNIEAEDVVGYGMRYKAPSPRRIGVIPIGYGDGYPR------------I 311

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
              G   I+G   P++G + MD  M D+TD    ++ + I + G     +I + DVA   
Sbjct: 312 RNEGYVLIRGRRAPLVGGVAMDAIMVDVTDVPEAQLWEEIVLMGRQGDEEISVHDVARWK 371

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            + +YD+L     R  + Y
Sbjct: 372 NSVSYDILTGWRARLPRIY 390


>gi|197247858|ref|YP_002146222.1| alanine racemase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197211561|gb|ACH48958.1| alanine racemase [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
          Length = 356

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGAILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|53719788|ref|YP_108774.1| alanine racemase [Burkholderia pseudomallei K96243]
 gi|53723911|ref|YP_103215.1| alanine racemase [Burkholderia mallei ATCC 23344]
 gi|67639484|ref|ZP_00438337.1| alanine racemase [Burkholderia mallei GB8 horse 4]
 gi|76809305|ref|YP_333995.1| alanine racemase [Burkholderia pseudomallei 1710b]
 gi|121600921|ref|YP_993394.1| alanine racemase [Burkholderia mallei SAVP1]
 gi|124383506|ref|YP_001029170.1| alanine racemase [Burkholderia mallei NCTC 10229]
 gi|126441754|ref|YP_001059490.1| alanine racemase [Burkholderia pseudomallei 668]
 gi|126450850|ref|YP_001080901.1| alanine racemase [Burkholderia mallei NCTC 10247]
 gi|126454140|ref|YP_001066773.1| alanine racemase [Burkholderia pseudomallei 1106a]
 gi|134277700|ref|ZP_01764415.1| alanine racemase [Burkholderia pseudomallei 305]
 gi|166999682|ref|ZP_02265517.1| alanine racemase [Burkholderia mallei PRL-20]
 gi|167720193|ref|ZP_02403429.1| alanine racemase [Burkholderia pseudomallei DM98]
 gi|167739195|ref|ZP_02411969.1| alanine racemase [Burkholderia pseudomallei 14]
 gi|167816406|ref|ZP_02448086.1| alanine racemase [Burkholderia pseudomallei 91]
 gi|167846316|ref|ZP_02471824.1| alanine racemase [Burkholderia pseudomallei B7210]
 gi|167894898|ref|ZP_02482300.1| alanine racemase [Burkholderia pseudomallei 7894]
 gi|167903285|ref|ZP_02490490.1| alanine racemase [Burkholderia pseudomallei NCTC 13177]
 gi|167911526|ref|ZP_02498617.1| alanine racemase [Burkholderia pseudomallei 112]
 gi|167919536|ref|ZP_02506627.1| alanine racemase [Burkholderia pseudomallei BCC215]
 gi|217421882|ref|ZP_03453386.1| alanine racemase [Burkholderia pseudomallei 576]
 gi|237812829|ref|YP_002897280.1| alanine racemase [Burkholderia pseudomallei MSHR346]
 gi|242314484|ref|ZP_04813500.1| alanine racemase [Burkholderia pseudomallei 1106b]
 gi|254177500|ref|ZP_04884155.1| alanine racemase [Burkholderia mallei ATCC 10399]
 gi|254179300|ref|ZP_04885899.1| alanine racemase [Burkholderia pseudomallei 1655]
 gi|254189313|ref|ZP_04895824.1| alanine racemase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197584|ref|ZP_04904006.1| alanine racemase [Burkholderia pseudomallei S13]
 gi|254200168|ref|ZP_04906534.1| alanine racemase [Burkholderia mallei FMH]
 gi|254206506|ref|ZP_04912858.1| alanine racemase [Burkholderia mallei JHU]
 gi|254261307|ref|ZP_04952361.1| alanine racemase [Burkholderia pseudomallei 1710a]
 gi|254297188|ref|ZP_04964641.1| alanine racemase [Burkholderia pseudomallei 406e]
 gi|254358084|ref|ZP_04974357.1| alanine racemase [Burkholderia mallei 2002721280]
 gi|81823990|sp|Q62JA4|ALR_BURMA RecName: Full=Alanine racemase
 gi|166919548|sp|A3MKW5|ALR_BURM7 RecName: Full=Alanine racemase
 gi|166919549|sp|A2SB51|ALR_BURM9 RecName: Full=Alanine racemase
 gi|166919550|sp|A1V591|ALR_BURMS RecName: Full=Alanine racemase
 gi|52210202|emb|CAH36181.1| alanine racemase, catabolic [Burkholderia pseudomallei K96243]
 gi|52427334|gb|AAU47927.1| alanine racemase [Burkholderia mallei ATCC 23344]
 gi|76578758|gb|ABA48233.1| alanine racemase [Burkholderia pseudomallei 1710b]
 gi|121229731|gb|ABM52249.1| alanine racemase [Burkholderia mallei SAVP1]
 gi|124291526|gb|ABN00795.1| alanine racemase [Burkholderia mallei NCTC 10229]
 gi|126221247|gb|ABN84753.1| alanine racemase [Burkholderia pseudomallei 668]
 gi|126227782|gb|ABN91322.1| alanine racemase [Burkholderia pseudomallei 1106a]
 gi|126243720|gb|ABO06813.1| alanine racemase [Burkholderia mallei NCTC 10247]
 gi|134251350|gb|EBA51429.1| alanine racemase [Burkholderia pseudomallei 305]
 gi|147749764|gb|EDK56838.1| alanine racemase [Burkholderia mallei FMH]
 gi|147753949|gb|EDK61014.1| alanine racemase [Burkholderia mallei JHU]
 gi|148027211|gb|EDK85232.1| alanine racemase [Burkholderia mallei 2002721280]
 gi|157807101|gb|EDO84271.1| alanine racemase [Burkholderia pseudomallei 406e]
 gi|157936992|gb|EDO92662.1| alanine racemase [Burkholderia pseudomallei Pasteur 52237]
 gi|160698539|gb|EDP88509.1| alanine racemase [Burkholderia mallei ATCC 10399]
 gi|169654325|gb|EDS87018.1| alanine racemase [Burkholderia pseudomallei S13]
 gi|184209840|gb|EDU06883.1| alanine racemase [Burkholderia pseudomallei 1655]
 gi|217395624|gb|EEC35642.1| alanine racemase [Burkholderia pseudomallei 576]
 gi|237506222|gb|ACQ98540.1| alanine racemase [Burkholderia pseudomallei MSHR346]
 gi|238520031|gb|EEP83495.1| alanine racemase [Burkholderia mallei GB8 horse 4]
 gi|242137723|gb|EES24125.1| alanine racemase [Burkholderia pseudomallei 1106b]
 gi|243064332|gb|EES46518.1| alanine racemase [Burkholderia mallei PRL-20]
 gi|254219996|gb|EET09380.1| alanine racemase [Burkholderia pseudomallei 1710a]
          Length = 356

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 147/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +  ++  A+VK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRHAAQSKVWAIVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTAVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + Q+  F  
Sbjct: 121 QLKMNSGMNRLGYTPEKYRAAWERARACPGIGQITLMTHFSDADGERG--VAEQMATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   S A+S+ +L  P+ HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAQGIAGAR-SFANSAAVLWHPSAHFDWVRPGIMLYGASPSGRAADIADRGLKPTMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTLAKGQAVGYGSMFVAEDTMRIGVVACGYADGYPRIA-----------PEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA    T  Y+L+  
Sbjct: 287 VVDGVRTRIVGRVSMDMLTVDLTPVPQAGVGARVELWGETLPIDDVAARCMTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|254497101|ref|ZP_05109922.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254353681|gb|EET12395.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 351

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 89/361 (24%), Positives = 159/361 (44%), Gaps = 17/361 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + I+ +AL +N   +   +   +   +VK NAYG G   + P L    V+ F V  +EE 
Sbjct: 1   MVIEPSALLHNLAQIRRFAPGKKIITMVKANAYGCGLHAVVPVL-EGQVEAFGVACIEEA 59

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + +R    +    +  G+    E  +        +   P    +             ++V
Sbjct: 60  MAIRKMGSRTYCILFQGVFSPDEFKMVAQYQFGCVMHQPHQMQWLLNTPLDTPIKLWVKV 119

Query: 129 DTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +TG +RLG    E  +  +   +   + +   +++HLACAD+P    N  Q+  F  +  
Sbjct: 120 NTGMHRLGFKPHELQEVMNALQDCPWVDKEIGLMTHLACADEPECIENVQQISLFEQISV 179

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIIL 244
                + S+A+S+ I+  P  H  + RPGI LYG +    +      +  V+   + I  
Sbjct: 180 AGFS-QRSIANSAAIISFPQTHADVVRPGIMLYGVSPFAKQTAIDLGLVPVMRFVSAISA 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +        V Y G  K  + S I + A GY DGYP  +                 +++G
Sbjct: 239 VYDHPPFAQVGYSGTWKSDKPSRIGIVAAGYGDGYPRHI-----------AANTPIWVQG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             V I+G+++MDM   D+T+   I+ G  ++++G  I ++ +A A+GT+ Y+LL +I  R
Sbjct: 288 REVTIVGRVSMDMLAVDLTEHPDIQPGAPVELWGTHILVERIAQAAGTSGYELLCQISER 347

Query: 365 Y 365
            
Sbjct: 348 V 348


>gi|312868223|ref|ZP_07728423.1| alanine racemase [Streptococcus parasanguinis F0405]
 gi|311095968|gb|EFQ54212.1| alanine racemase [Streptococcus parasanguinis F0405]
          Length = 370

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 75/378 (19%), Positives = 154/378 (40%), Gaps = 25/378 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +     ++DL A+  N   ++    +     AVVK NAYG G   +   L    V  F 
Sbjct: 5   KHRPTVARVDLDAIAFNVQQVSDHIPSQALKYAVVKANAYGHGVVAVTKKLAPQ-VDGFC 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V++++E +++R    Q  + +L  +      +  + ++   ++S+  L       +    
Sbjct: 64  VSNMDEALEIREEGLQHPLLILGVVPSETVNLAKEHDIRLTVASLAWLVQLLGQEADLSG 123

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++VD+G  R+G    E +            ++  I +H A AD+        Q + 
Sbjct: 124 LKVHIKVDSGMGRIGFRTIEEIKEAERLLIAAGAEIEGIFTHFATADEADDRKFQAQYQF 183

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F+ +++  + +   +   +S+  L   +  F   R G  +YG       +   + ++  +
Sbjct: 184 FKEVLAALETLPPIVHASNSATSLWHADTIFTAVRLGDVMYGLNPSGSVLALPYEIKPAL 243

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + ++ +++  AG+ + YG          I    IGYADG+   +             
Sbjct: 244 SLVSELVHVKQLEAGQDIGYGATYTTEEPQWIGTIPIGYADGWIREMQNF---------- 293

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                IKG   PI+G+++MD     + + L +  G  + + G     +I   +VA   GT
Sbjct: 294 --HVLIKGEFCPIVGRVSMDQITVRLPEELPL--GTKVTLIGREGEKEITATEVADYRGT 349

Query: 353 TNYDLLVRIGTRYAKFYT 370
            NY+++  +  R  + YT
Sbjct: 350 INYEVVCLLSDRIPRDYT 367


>gi|146277115|ref|YP_001167274.1| alanine racemase [Rhodobacter sphaeroides ATCC 17025]
 gi|226711058|sp|A4WRF5|ALR_RHOS5 RecName: Full=Alanine racemase
 gi|145555356|gb|ABP69969.1| alanine racemase [Rhodobacter sphaeroides ATCC 17025]
          Length = 349

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 128/365 (35%), Positives = 190/365 (52%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L IDL A+  NW +++ + + + +T AVVK +AYGLG  K+A AL  AG + FFV + 
Sbjct: 4   ATLTIDLDAIAANWRALDQMTASDCQTGAVVKADAYGLGAAKVAHALARAGARRFFVAAC 63

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EEG ++R       +I V  G   G   +I D +L P+++S+ QLT + + +      P+
Sbjct: 64  EEGAEVRRALGSGPQICVFSGHMEGDTALIRDFDLTPMLNSIEQLTRHFETLGGQ---PF 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            LQ+D+G NRLGL   E       +         L++SHLACAD+P   +N+ QL  FR 
Sbjct: 121 GLQLDSGMNRLGLEPGEWEAVAATALEA---GPELLMSHLACADEPDHPMNTEQLRAFRA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +     G+  SL+++ GILLGP +HF+LTRPGI LYGG          + VV     ++ 
Sbjct: 178 MTDG-TGVPRSLSATGGILLGPAWHFELTRPGIGLYGGRPFEEA----RPVVHLSLPVVQ 232

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+   GE V Y         S IA  A GYADG P TLS   S  +  V          
Sbjct: 233 VREVEIGEPVGYSNSWTAEHTSTIATVAAGYADGLPRTLSSRASLFAGRV---------- 282

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+++MD+   D++    +   D + I       DD+A  +GT  Y++L  +G R
Sbjct: 283 -PCPLVGRVSMDLITVDVSHLPEVP--DALDILCRHQTPDDLADTAGTIGYEILTSLGRR 339

Query: 365 YAKFY 369
           Y + Y
Sbjct: 340 YQRRY 344


>gi|262038156|ref|ZP_06011553.1| alanine racemase [Leptotrichia goodfellowii F0264]
 gi|261747804|gb|EEY35246.1| alanine racemase [Leptotrichia goodfellowii F0264]
          Length = 363

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 158/370 (42%), Gaps = 23/370 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I++  L +N   +  ++      AV+K + YG G EKI  AL   G+++F V + EE
Sbjct: 4   WAEINIKNLYDNIKEIEKITSKEHIMAVIKADGYGHGMEKICEALIKTGIKNFAVATSEE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             K+R       I +L  I       + + N+  +I+   ++ +  K      +    ++
Sbjct: 64  AHKIREIDDSVNILILGPIENDHANSVSEKNIYFMITDFQEIDYLEKNKC---NTEVFIK 120

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG  R+G  LQE       +  +      + +     + D       +Q++RF  + +
Sbjct: 121 IDTGMGRVGFQLQEIEKLA-ETLKRCKYVKPIGVFSHFSSSDSDVDYTDLQIKRFEEVSN 179

Query: 188 HYKG-----IEASLASSSGILLGPNYHFQLTRPGISLY-GGTDKINKSHPMQTVVTAEAR 241
             K          L +S G L      +   R GI +Y G T++  K +  + V++  A+
Sbjct: 180 KLKKELPTVKYRHLLNSFGSLRFQKNKYDFIRAGIIIYGGVTEEETKPYKFKPVMSLYAK 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I  I+       +SYG      +   +A  +IGYADG    LS             G  +
Sbjct: 240 ISYIKTLSEDSYISYGNTYLGKKGETLATVSIGYADGVRRDLSN-----------KGYVY 288

Query: 302 IKGYMVPILGKITMDMTMFDITD--SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            KG+   I+G++ MD  +  + +  +     GD ++ FG +I + DVA    T +Y++L 
Sbjct: 289 YKGHKCNIVGRVCMDQLVIKLPEKLAKEAAKGDKVEFFGENINVVDVANLCNTISYEILC 348

Query: 360 RIGTRYAKFY 369
            I  R  + Y
Sbjct: 349 GISQRVPRIY 358


>gi|239630389|ref|ZP_04673420.1| alanine racemase [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239526672|gb|EEQ65673.1| alanine racemase [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 378

 Score =  258 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/379 (23%), Positives = 150/379 (39%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++ ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPAKVLIDETAILHNIQHEVARLKKQTQLFAVVKADAYGHGMLRVARVAKAAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SS   L     ++      P
Sbjct: 67  ILDEALGLRKADYSEPVLVLGIVPSQYAAIAAAQTISLPVSSTEWLEQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQ 178
                L +DTG  R+G +  +AL            Q  +  I +H A AD P       Q
Sbjct: 127 PLRIHLALDTGMGRIGFTEDQALKTAVAFVEAHSKQFVIEGIFTHFATADAPDDTYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           +++F  L+         +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VDKFNHLVDLLPSRPRYVHVSNSATSLWHAVCNGNMIRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   +   D  I    IGYADG+   L G       
Sbjct: 247 EPALSLESELTYCKQVHAGDGISYGVTYRAKGDEFIGTVPIGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGQYCEIVGRICMDQFMIRLPKAYPA--GTKVVLVGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   +  R  +
Sbjct: 353 YSKTIHYEIACNLTPRLKR 371


>gi|148273757|ref|YP_001223318.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831687|emb|CAN02656.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 566

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/374 (24%), Positives = 162/374 (43%), Gaps = 25/374 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  +DL A+++N  ++ AL+  ART   VK +AYG G  ++A A   AG +   V  V  
Sbjct: 17  RAVVDLDAIRHNVRTLAALAAPARTMVAVKADAYGHGALQVARAALEAGAESLAVLDVAS 76

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
            V+LR     AR+           ++  +  +   +S++ +L    +   + G+     L
Sbjct: 77  AVELRRSGITARLLAWLHGVDTDFRVAVENGIDLGVSALWELERIAAAGRATGIRARVHL 136

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG +R G + +   D    +          + +  +   D S   +   L RF   +
Sbjct: 137 KADTGLSRNGATPELWPDLVRAAVAADAAGELTLHALWSHLADASPEDDDAALARFHEAV 196

Query: 187 S-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTA 238
                   + +E  LA+SS  +  P   F + R GI++YG +   +   +   +   +T 
Sbjct: 197 RVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPFDDRSGRDLGLIPAMTL 256

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA ++ +++  AG  VSYG   +    S + +  +GYADG P   +   S          
Sbjct: 257 EADVVSVKRVEAGHGVSYGLDHRTAGPSTLVLVPLGYADGIPRIAAPRAS---------- 306

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
              + G   P+ G+I MD  + D+ D   +EVGD   I GP    +   ++ A  + T  
Sbjct: 307 -VLLNGRRFPVAGRIAMDQLVLDVGDLP-VEVGDTAVILGPGDRGEPTAEEWAGWAETIG 364

Query: 355 YDLLVRIGTRYAKF 368
            +++ R+G R  + 
Sbjct: 365 DEIVTRVGPRVDRV 378


>gi|117927564|ref|YP_872115.1| alanine racemase [Acidothermus cellulolyticus 11B]
 gi|117648027|gb|ABK52129.1| alanine racemase [Acidothermus cellulolyticus 11B]
          Length = 405

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 104/384 (27%), Positives = 168/384 (43%), Gaps = 28/384 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                +  +DL A++ N   + A++G     AVVK + YG G    A A    G     V
Sbjct: 26  RASRAQAVVDLGAIRENVRRLRAVTG-VDVMAVVKADGYGHGLLPAARAAVRGGASWLGV 84

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVS 121
             VEE + LR+      I  L      +       ++   +S+            + G +
Sbjct: 85  AFVEEALALRMAGIDVPILCLLAAPGERFAEAIAADVDLAVSAEWALSEVCRAATTAGRT 144

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQ 178
               L+VDTG +R G +  E  D    +   +   L ++  I SHL   D+P     +VQ
Sbjct: 145 ARIHLEVDTGLSRGGATPAEWPDLLAATAQARAAGLVEVVGIWSHLVHGDNPEHADTTVQ 204

Query: 179 LERFRT--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----S 229
           +ERF     ++   GI      LA+S G LL P   + L RPGI++YG +          
Sbjct: 205 VERFDEALAVAERFGIRPAVRHLANSGGALLAPRTRYDLVRPGIAVYGLSPAPALVSAGE 264

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +   A++ L+++  AGE +SYG + +  R + +A+  +GYADG P   + +   
Sbjct: 265 LGLRPAMHLRAQVALVKELPAGEGISYGHRYRTLRPTRVALIPLGYADGIPRQATNVAPV 324

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
             P+V         G    I G + MD  + D+     +  GD + IFGP    +   D+
Sbjct: 325 WFPAV---------GRRT-ISGTVCMDQFVVDVGPDAPVAAGDDVVIFGPGDDGEPTADE 374

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A A GT +Y+++ RIG R  + Y
Sbjct: 375 WASAVGTISYEIVSRIGARVPRVY 398


>gi|326335280|ref|ZP_08201475.1| Mur ligase domain protein/alanine racemase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692551|gb|EGD34495.1| Mur ligase domain protein/alanine racemase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 368

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 151/379 (39%), Gaps = 23/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQ 58
           M   E   L+I L  L++N   +   L  + +  AVVK N+YG     IA  L       
Sbjct: 1   MSVQE-TTLEIRLDNLQHNVLQLKKYLKADTQFLAVVKANSYGNSSIAIAKYLEKKNLAD 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            F V    EG++LR       I + +       + I   NL P + S   +  +      
Sbjct: 60  YFAVAFTSEGIELRKAGVTKPILIFHPQLI-DFEDIIHYNLEPTLYSKRLIIHFIDFAKK 118

Query: 119 GV--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVN 175
                +P+ ++ ++G NRLG S++E  D       +   ++    SHL A  D  +    
Sbjct: 119 KNLYEYPFHIKCNSGMNRLGFSVEEIDDICEIIKKQNNIKVKTAFSHLLASEDLEARSFM 178

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q+  F+             I     ++SGIL  P  HF + R GI +YG  +      
Sbjct: 179 EKQISIFKDFQKKLETHFSHKIIYHNCNTSGILNYPEAHFDMVRSGIGMYGFANDTRLQK 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + +   ++ I  I    AG+ V Y    +  +   IA  ++G+ADG            
Sbjct: 239 DFKPITILKSIISQIHHIQAGDYVGYNFGFQAPKAMKIATISVGHADGLNRIYGKGV--- 295

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                  G  FIK    PI+G + MDM M DIT     + GD + IF      + +A  +
Sbjct: 296 -------GFVFIKDKKCPIVGNVCMDMIMTDITGL-DCDEGDEVIIFDERHTSETLAETA 347

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T +Y+L+  +  R  + +
Sbjct: 348 QTISYELVTSLSRRIKRIF 366


>gi|227533031|ref|ZP_03963080.1| alanine racemase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227189432|gb|EEI69499.1| alanine racemase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 378

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 148/379 (39%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNIQHEVARLKKQTQLFAVVKADAYGHGMLRVARVAKAAGATGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SS   L     ++      P
Sbjct: 67  ILDEALGLRKADYSEPVLVLGIVPSQYAAIAAAQTISLPVSSTEWLEQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQ 178
                L +DTG  R+G +  +AL            Q  +    +H A AD P       Q
Sbjct: 127 PLRIHLALDTGMGRIGFTEDQALKTAVAFVEAHPKQFVIEGVFTHFATADAPDDTYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           +++F  L+         +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VDKFNHLVDLLPSRPRYVHVSNSATSLWHAACNGNMIRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   +   D  I    IGYADG+   L G       
Sbjct: 247 EPALSLESELTYCKQVHAGDGISYGVTYRAKGDESIGTVPIGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGQYCEIVGRICMDQFMIRLPKAYPA--GTKVVLVGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   +  R  +
Sbjct: 353 YSKTIHYEIACNLTPRLKR 371


>gi|24380196|ref|NP_722151.1| alanine racemase [Streptococcus mutans UA159]
 gi|81845200|sp|Q8DSF4|ALR_STRMU RecName: Full=Alanine racemase
 gi|24378201|gb|AAN59457.1|AE015010_6 putative alanine racemase [Streptococcus mutans UA159]
          Length = 371

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +      + L  +K N   +       A+T AVVK NAYG G  ++A A+    V  F V
Sbjct: 6   HRPTTALVHLDRIKFNIEQVQHHIPKSAKTFAVVKANAYGHGAVQVAQAIQKQ-VDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L  + P +  +    N+   ++ +                
Sbjct: 65  SNLDEALELRQAGLNDFILILGVLLPEEVALAKKENITITVADLDWFDKVQTENIDLAGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VD+G  R+G+      +       K    ++ I +H A AD+ S+   S QLE F
Sbjct: 125 SVHVKVDSGMGRIGVRSTAEANQLIAGLQKAGATVNGIFTHFATADEASTVKFSQQLEMF 184

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
            TLIS       ++   +S+  +   +      R GI +YG     N     + ++  + 
Sbjct: 185 TTLISQLDYKPQTVHASNSATSIWHSDTVMNAVRLGIVMYGLNPSGNALELPYEVKPALE 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + ++ +++  AG+ V YG     ++  +I    +GYADG+   L G            
Sbjct: 245 LTSALVQVKEVQAGDTVGYGATYTASQAEIIGTVPVGYADGWTRDLQGF----------- 293

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G+   I+G+++MD     +  +  +  G  + + G D    I   DVA    T 
Sbjct: 294 -HVLVNGHYCEIVGRVSMDQITIRLPKAYPL--GTKVTLIGQDGHETISATDVAEKRETI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  I  R  + Y
Sbjct: 351 NYEVLCLISDRVPRKY 366


>gi|269123699|ref|YP_003306276.1| alanine racemase [Streptobacillus moniliformis DSM 12112]
 gi|268315025|gb|ACZ01399.1| alanine racemase [Streptobacillus moniliformis DSM 12112]
          Length = 342

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/361 (25%), Positives = 150/361 (41%), Gaps = 28/361 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A K N   +      ++  A+VK NAYG G  KI  +    G+  F V  +EE 
Sbjct: 5   AIIDLDAFKKNLDKILEKIPASKVMAIVKANAYGHGSIKIVESAIEKGINFFGVARIEEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++    P+  + VL  I     +      +   ISS         ++   ++  +   +
Sbjct: 65  EEILNIFPKVDVLVLSPIMKSDIENAVSKGIHLTISS---FEDIEYILENKINGNFHYAL 121

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG  R+G    E                  I SHL+ AD+  +   ++Q+E+F  +++ 
Sbjct: 122 DTGMGRIGFMEDEIYRAFSMLK------PIGIYSHLSSADN-DNEYTNMQIEKFNRIVND 174

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
                  + +S G +      + L R GI +YG       +   + V+T +AR+  I+  
Sbjct: 175 LDVKYKHILNSFGSINNYE-DYDLYRLGIIMYG----AEMTDIFKPVMTFKARVNHIKVL 229

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
                + Y      +    IA  + GYADG   ++S              K +  G   P
Sbjct: 230 EKDTYIGYSKTYLASCGEKIATISCGYADGMLRSMSNRS-----------KVYFNGKYYP 278

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           I+G I MD  M  + D   I+V DY++IFG +I + D+A    T +Y+LL  I  R  + 
Sbjct: 279 IVGNICMDQFMIKVDD--DIKVNDYVEIFGNNILVGDLAKELNTISYELLCAISHRVKRI 336

Query: 369 Y 369
           Y
Sbjct: 337 Y 337


>gi|167824787|ref|ZP_02456258.1| alanine racemase [Burkholderia pseudomallei 9]
 gi|226198963|ref|ZP_03794526.1| alanine racemase [Burkholderia pseudomallei Pakistan 9]
 gi|225929063|gb|EEH25087.1| alanine racemase [Burkholderia pseudomallei Pakistan 9]
          Length = 356

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 88/366 (24%), Positives = 146/366 (39%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL NN   +   +  ++  A+VK NAYG G  ++ P L   G   F +  
Sbjct: 3   RPISATIHTAALANNLSVVRRHAAQSKVWAIVKANAYGHGLARVFPGLR--GTDGFGLLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E VKLR       I +L G     +  + D   +       +     +          
Sbjct: 61  LDEAVKLRELGWAGPILLLEGFFRSTDIDVIDRYSLTTAVHNDEQMRMLETARLSKPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++       +          +++H + AD       + Q+  F  
Sbjct: 121 QLKMNSGMNRLGYTPEKYRAAWERARACPGIGQITLMTHFSDADGERG--VAEQMATFER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEA 240
                 G   S A+S+ +L  P  HF   RPGI LYG +            ++  +T  +
Sbjct: 179 GAQGIAGAR-SFANSAAVLWHPPAHFDWVRPGIMLYGASPSGRAADIADRGLKPTMTLAS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I ++    G+ V YG          I V A GYADGYP                G   
Sbjct: 238 ELIAVQTLAKGQAVGYGSMFVAEDTMRIGVVACGYADGYPRIA-----------PEGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    I+G+++MDM   D+T      VG  ++++G  + +DDVA    T  Y+L+  
Sbjct: 287 VVDGVRTRIVGRVSMDMLTVDLTPVPQAGVGARVELWGETLPIDDVAARCMTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 VAPRVP 352


>gi|302869894|ref|YP_003838531.1| alanine racemase [Micromonospora aurantiaca ATCC 27029]
 gi|302572753|gb|ADL48955.1| alanine racemase [Micromonospora aurantiaca ATCC 27029]
          Length = 372

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 27/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +++DL A++ N   + A + +A   AVVK + YG G    A A  +AG     V ++ E 
Sbjct: 6   VRVDLDAIRENVTRLKAGT-SAELMAVVKGDGYGHGMVPAARAALDAGADQLGVCTLAEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           ++LR     A +                  +    + + Q                  L+
Sbjct: 65  LRLREEGITAPVLAWLLSPGLPLHDGITVGVDLGCAGLTQLDEMIQASRRADRPARLHLK 124

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +DTG  R G ++ +       +   +   L ++  + SH   AD P       QL  F+ 
Sbjct: 125 IDTGLARGGATVADWPALLEAAAKAQADGLVEVVGVWSHFVYADSPGHPTTDRQLAVFQE 184

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            +     +  +     LA+S+  L  P+ HF L RPGI++YG +    +   ++  +TA 
Sbjct: 185 GLEMVTRAGLRPRYRHLANSAATLTRPDTHFDLVRPGIAVYGLSPVAGEQFGLRPAMTAR 244

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           AR++L ++  AG  VSYG      +++ +AV  +GYADG P   S             G 
Sbjct: 245 ARVMLTKRVAAGTGVSYGHTYLTEQEANLAVVPLGYADGVPRHASNT-----------GP 293

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNY 355
             + G    I G++ MD  + D  D   +  GD   +FG     +   DD A A GT NY
Sbjct: 294 VQLAGKRRTISGRVCMDQFVVDCGDD-EVTDGDVATLFGSGADGEPTADDWAEAVGTINY 352

Query: 356 DLLVRIGT-RYAKFY 369
           +++ R G  R  + Y
Sbjct: 353 EIVTRFGGVRVPRVY 367


>gi|145219160|ref|YP_001129869.1| alanine racemase [Prosthecochloris vibrioformis DSM 265]
 gi|145205324|gb|ABP36367.1| alanine racemase [Chlorobium phaeovibrioides DSM 265]
          Length = 368

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 97/378 (25%), Positives = 156/378 (41%), Gaps = 25/378 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                + L  L++N   +   +G   R   VVK NAYG    +++  L   GV DF V +
Sbjct: 1   MTEAIVSLQHLQHNLSEIRRKTGEGVRIMGVVKANAYGHDVHRVSETLEQNGVTDFGVAN 60

Query: 65  VEEGVKL---RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGV 120
           ++E ++L   R     A I         Q        +   + +        S   + G 
Sbjct: 61  IQEAIELQTGRALKKPASILAFASPLSSQIPFYLKHGIEMTLCNKETLFAAESHAAATGK 120

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                ++VDTG  RLGL    A++    S      ++  I +H A +          QL 
Sbjct: 121 KLRVHIKVDTGMGRLGLPPAAAMELLRASEQCPGIEVKGIYTHFADSSGDM-EFTRRQLR 179

Query: 181 RFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQ 233
            F +L S Y+      +    A+S  IL  P  +  + RPGI+LYG     +      ++
Sbjct: 180 DFLSLASEYEHSSGKQVLRHAANSGAILSLPEANLDMVRPGITLYGYHPAKETGTRLSLK 239

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  E +I  ++   +G  +SY    +    + IA  A GYADGYP  LSG        
Sbjct: 240 PVMQVEGKIAFLKTVPSGSTISYCRTWRAPATTTIATIAAGYADGYPRALSGK------- 292

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVALASG 351
              G +    G     +G ITMD  M D+  S + +VGD + +FG +     + +A  S 
Sbjct: 293 ---GARVTANGQSFSQVGTITMDQIMVDLGTSSTAKVGDRVILFGWEGPTTAETLADLSN 349

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y++L  +  R  + +
Sbjct: 350 TISYEILCAVSRRADRIF 367


>gi|332161937|ref|YP_004298514.1| alanine racemase, catabolic [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318605542|emb|CBY27040.1| alanine racemase, catabolic [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666167|gb|ADZ42811.1| alanine racemase, catabolic [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863879|emb|CBX73970.1| alanine racemase [Yersinia enterocolitica W22703]
          Length = 363

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 20/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   ++L+AL +N + + +  G A+  +VVK NAYG G  ++   L       F +  
Sbjct: 3   RPISATLNLSALHHNLNVVRSHVGTAKIWSVVKANAYGHGLARVWQGLAA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+ ++ D   +             K          
Sbjct: 61  LNEAILLREQGWQGPILLLEGFFQAQDLVLLDHYRLTTAVHSDWQLEVIKAARLTAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+ ++G NRLG  + +A      + +        ++SH A AD+P       Q  + + 
Sbjct: 121 YLKFNSGMNRLGFPIGQAEAVWQWANSLSNVGEITLMSHFANADNPIG--VDEQFVQIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             S +       A+S+ IL  PN H+   RPGI LYG +   +        ++ V++  +
Sbjct: 179 -ASGHIPAARCFANSAAILRNPNTHYDWVRPGIILYGASPSGDITDIAGLGLRAVMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ V YG + + T    I V A GYADGYP                G   
Sbjct: 238 EIIALQSLSAGQSVGYGSRYRATGSQRIGVVACGYADGYPR-----------VAPTGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     ++G  ++I+G ++ +D+VA A+GT  Y+L+  
Sbjct: 287 MVDGILTHTVGAISMDMLTVDLTPCPQAQIGSKVEIWGENVPIDNVAQAAGTVGYELMCA 346

Query: 361 IGTRY 365
           + +R 
Sbjct: 347 LASRV 351


>gi|157370985|ref|YP_001478974.1| alanine racemase [Serratia proteamaculans 568]
 gi|157322749|gb|ABV41846.1| alanine racemase [Serratia proteamaculans 568]
          Length = 357

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 148/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L A +NN   +   +  A+  +VVK NAYG G + +  +L       F +  
Sbjct: 3   RPISATLHLGAFENNLQVVRRFAPKAKVWSVVKANAYGHGIKHVWRSLAQ--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+  + D   +                        
Sbjct: 61  LAEAILLRESGWQGPILLLEGFFKPQDLALLDRYRLTTSVHSDWQLAAIAEAKLSAPLDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG + +        +          ++SH A AD P       Q+     
Sbjct: 121 YLKVNSGMNRLGFAPERLHAVWMKAQEIGNIASLTLMSHFATADGPQG--VEAQMASIER 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +    +   LA+S+  L  P  H    RPGI LYG +            +Q  +T  +
Sbjct: 179 -AAKGITLPRCLANSAATLWHPQTHGSWVRPGIVLYGASPSGQWRDIADSGLQPTMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   +G+ V YG + +      I V A GYADGYP                G   
Sbjct: 238 EIIGVQTLKSGDQVGYGWRYRAEGAQRIGVVACGYADGYPRHAQ-----------TGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G +   LG ++MDM + D+T      +G  ++++G  + +DDVA A+GT  Y+LL  
Sbjct: 287 WVDGVLTRTLGTVSMDMLVVDLTPCPHAGIGAEVELWGRRLPVDDVATAAGTLGYELLTA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAARVP 352


>gi|300779772|ref|ZP_07089628.1| alanine racemase [Corynebacterium genitalium ATCC 33030]
 gi|300533882|gb|EFK54941.1| alanine racemase [Corynebacterium genitalium ATCC 33030]
          Length = 397

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 94/389 (24%), Positives = 156/389 (40%), Gaps = 43/389 (11%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L IDL A+ +N   +   +G A+   VVK NAY  G E++ P +  AG   F V +
Sbjct: 24  SPATLHIDLDAIAHNTALLKRGAGAAKLMCVVKANAYNHGVERVVPVMDKAGADAFGVAT 83

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E  +++  T    +               +     +            L+      P 
Sbjct: 84  LAEASQVKRLT-DKPVLAWMWAPGEPIPAGIEVGAPTLTH-------LRTLIDVSPHTPV 135

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DTG NR G+  ++  D            +  ++SHLACAD+P +  N+ Q E F+ 
Sbjct: 136 HLMLDTGMNRSGIDEEDWAD-AFAIATNAGLTVRGVMSHLACADEPGNPFNTEQYESFQR 194

Query: 185 LI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------- 232
            I  +   G++     LA+S G L      F+  R G++LYG      ++ P        
Sbjct: 195 GIALARSMGLDVPCNHLANSPGTLSRKELAFEQIRAGVALYGLDPVAPETGPEAAPGTAP 254

Query: 233 ---------QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                    +  +T  A I+ ++    GE  SYG       D   AV  +GYADG P   
Sbjct: 255 NTDFDRAQLRPAMTWSAEIVAVKLIGKGEGASYGLTWTAPEDGYTAVVPVGYADGLPRAW 314

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP-DI 341
                          +  + G   P +G+I MD  +  + D+   ++ GD   IFG   +
Sbjct: 315 QDAV-----------EVTVNGARYPQVGRICMDQFIVWLGDNPADVQPGDTAVIFGEGGM 363

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFYT 370
              ++A  +GT +Y+++     R  + Y+
Sbjct: 364 TAAELADRAGTIHYEVVCSPCGRVERQYS 392


>gi|332637957|ref|ZP_08416820.1| alanine racemase [Weissella cibaria KACC 11862]
          Length = 494

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 152/375 (40%), Gaps = 23/375 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                L+I   AL +N   +  L+   R  AVVK NAYG G  +I  A   AGV  F V 
Sbjct: 130 RRPSWLEISAEALAHNVAYVRELTETNRFFAVVKANAYGHGLPQIVTAAKRAGVDGFAVA 189

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++EGV LR +  +  I +L          +   +LIPV++S   L      ++   +  
Sbjct: 190 TIDEGVWLRQFGVKLPILILGVTPATYVADLAKYDLIPVVASETWLDDALSQLNSEATLT 249

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            ++ VDTG  R+G+  + E                  I  H A AD   +     QL ++
Sbjct: 250 VSVAVDTGMGRIGIRDRTELERVVAKLNAADNVVFQGIGMHFATADGNDTVYFEKQLAKW 309

Query: 183 RTLISH---YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVVT 237
             L         I   LA+S   L          R G ++YG         +  +Q V++
Sbjct: 310 HELTDELDLPADIWRHLANSGTSLWHEQPSTDAVRVGAAMYGFDASQGALPNRELQPVLS 369

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +A ++ +++  AG  +SYG     T    I    +GYADGYP  L G+D          
Sbjct: 370 LKAELVHVKQVPAGTSISYGATYTTTEPEWIGTVPVGYADGYPRALQGMDVL-------- 421

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
                 G    ++G+I MD  M  + + + +  G  + + G     +I L D+A    T 
Sbjct: 422 ---LPDGRRAELVGRIAMDQFMIRLPEEMPV--GTVVTLIGQVGDEEITLVDLANKMDTI 476

Query: 354 NYDLLVRIGTRYAKF 368
            Y++   +  R  + 
Sbjct: 477 PYEIATGLSPRLPRH 491


>gi|152980345|ref|YP_001353215.1| alanine racemase [Janthinobacterium sp. Marseille]
 gi|166968413|sp|A6SY68|ALR_JANMA RecName: Full=Alanine racemase
 gi|151280422|gb|ABR88832.1| alanine racemase [Janthinobacterium sp. Marseille]
          Length = 359

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 155/365 (42%), Gaps = 18/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   ID+ AL++N     A + +++  AVVK NAYG G E+              +  
Sbjct: 3   RPLIATIDIAALRSNLALAKARAPHSKAWAVVKANAYGHGLERGMRGFAA--ADGLGLIE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++   +LR      RI +L G     +  +   + +  +    +     +          
Sbjct: 61  LDAAARLRELGWNKRILLLEGFFDASDTKLLAEHRLDTVIHCEEQLLMLEQAKLRTQIDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV--NSVQLERF 182
            L++++G NRLG +                 +    ++H A A+DP + V     Q+ RF
Sbjct: 121 HLKLNSGMNRLGFTPARYRAAYERLRAIPAVRHISFVTHFANAEDPDNPVLPVQEQVRRF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAEA 240
           +       G E SLA+S+  LL P       RPGI LYG T   +  +   ++  ++  +
Sbjct: 181 KEATRDLPG-EKSLANSATDLLHPAAAADWIRPGIMLYGATPGAQSAEQFGLRAAMSLHS 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++  +AG+ V YG     T    I V A GYADGYP                G   
Sbjct: 240 EIIGVQHIVAGDAVGYGSAFVATAPMTIGVVACGYADGYPRHA-----------PSGTPV 288

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G    ++G+++MDM   D+T      +G  + ++G  + +D+VA A+GT  Y+L+  
Sbjct: 289 IVDGVKTRMVGRVSMDMITVDLTPVAKPRIGSKVTLWGASLPIDEVANAAGTVGYELMCG 348

Query: 361 IGTRY 365
           +  R 
Sbjct: 349 LAPRV 353


>gi|168237864|ref|ZP_02662922.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194736004|ref|YP_002114836.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194711506|gb|ACF90727.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197289280|gb|EDY28647.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 356

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 160/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGAILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRTMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|44805037|gb|AAS47779.1| racemase [Clostridium innocuum]
          Length = 383

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 85/388 (21%), Positives = 148/388 (38%), Gaps = 29/388 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           + SN    L+IDLT + +N   +  L  +  +  A+VK N YG G  + +  +   G+  
Sbjct: 5   LKSNTPSWLEIDLTRISHNIKEVQKLIPSTSKIMAIVKANGYGHGDVECSRMMEQQGIDF 64

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F V+SV+EGV+LR    Q+ I VL    P     + + +LI  + S       +      
Sbjct: 65  FGVSSVDEGVRLRENGIQSPILVLGYTPPVHFHYLNEASLIQTLVSKEYAEKLNAYAKEQ 124

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA------CADDPSS 172
            V      +V+TG +R+G+S +     +  S      +   +    +      C D+ + 
Sbjct: 125 NVVVKAHAKVNTGMSRIGISHRIMHIISRISKALVRLKHLNVSGIFSHFSVSDCLDEENC 184

Query: 173 HVNSVQLERFRTLISHYKGIEASLASSSGILLGP----NYHFQLTRPGISLYGGTDKINK 228
              + Q+  F  +++  +    +        L             RPG+   G    ++ 
Sbjct: 185 AFTNHQIALFERVLADLRPEGLTPVQRICRQLWNFKLSEPALDYVRPGLLWMGVPAMMHW 244

Query: 229 SHPMQTVVTAEARIILIRK---ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                   +               A          +    + +A  A+GYADG+P ++S 
Sbjct: 245 QFARHRSFSPHGMEGKCFPGKGYSARCYGQLRPSFQAEVCTRVATLAVGYADGFPRSVSN 304

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----I 341
                      G    + G  VPI+G I MD  M DIT    +  GD   + G D    +
Sbjct: 305 Q----------GACVLLHGRRVPIIGNICMDQMMVDITGLDGVSEGDVATLIGCDGDEVL 354

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +D+++  + T N + L  I  R  + Y
Sbjct: 355 SVDELSRLAHTINNETLCWISQRVPRIY 382


>gi|296532301|ref|ZP_06895040.1| alanine racemase [Roseomonas cervicalis ATCC 49957]
 gi|296267377|gb|EFH13263.1| alanine racemase [Roseomonas cervicalis ATCC 49957]
          Length = 370

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 117/363 (32%), Positives = 171/363 (47%), Gaps = 21/363 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L +DL A+  NW  + A   +   A VVK + YGLG   +A AL  AG + FFV    
Sbjct: 26  AELLVDLGAIVANWRDLAARHASGPVAGVVKADGYGLGAAPVARALAAAGCRHFFVAQFA 85

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG+ LR       +  + G  P       D   +     +      ++  + G      L
Sbjct: 86  EGLALRQALGHGPMVAVLGGFPPGADDGADLTPV-----LNAPADLAEARAAGRRGAI-L 139

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             DTG  RLGL+  E         +     L  +++HLACAD+P   +N+ Q  RF  + 
Sbjct: 140 HADTGMERLGLNAAELAAA----GDLSDLGLRYVMTHLACADEPGHPLNAQQAARFAAVR 195

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +   G+ AS A+SSG+ LG  +   L RPG +LYG      + +PM+ V+     I+ +R
Sbjct: 196 AGLPGLPASFANSSGLFLGEGFASDLARPGCALYGINPTPGQPNPMRPVLRLTVPILQLR 255

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +  AG  V YG      RDS IA  A GYADGY   LS             G   + G  
Sbjct: 256 EVPAGTSVGYGASWVAKRDSRIATIAAGYADGYLRVLSNQ-----------GVATLHGQD 304

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           VP++G+++MD+   D+TD+     GD +++ GP    D VA  +GT  Y++L  +G RY 
Sbjct: 305 VPLVGRVSMDLITLDVTDAPEARPGDRVELIGPRQTPDAVAALAGTIGYEILTSLGARYR 364

Query: 367 KFY 369
           + Y
Sbjct: 365 RRY 367


>gi|251783257|ref|YP_002997562.1| alanine racemase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242391889|dbj|BAH82348.1| alanine racemase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 366

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 157/381 (41%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        RT AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQENIPLGVRTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   ++S+  L    +   
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAITRQVTVTVASLEWLAMAKQEWP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+GL     +D           ++  I +H A AD+  +     
Sbjct: 120 DLKGLKVHIKIDSGMGRIGLRSVTEVDNLIAGLKSMRAEVEGIFTHFATADEADTVKFEQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QL  F  L+       + +   +S+  L      F   R GI +YG      ++    P+
Sbjct: 180 QLTFFTNLVDQLADKPSLVHASNSATSLWHSETIFNAVRLGIVMYGLNPSGSELALPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +     E+ ++ +++   GE V YG   K      +    IGYADG+   + G       
Sbjct: 240 KEAFNLESVLVHVKEIAPGETVGYGATYKAQTSEYVGTVPIGYADGWTRDMQGFT----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    ++G    I+G+++MD     +  +  +  G  + + G D    I   D+A 
Sbjct: 295 -------VLVEGQPCEIIGRVSMDQMTIRLPRAYPL--GTKVTLIGQDQEKVISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRVPRVY 366


>gi|78058366|gb|ABB17545.1| VanTG2 [Enterococcus faecalis]
          Length = 712

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 167/373 (44%), Gaps = 29/373 (7%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL  L++N   +   +       AVVK  AYG G  +IA  L   GV+ F V +++E
Sbjct: 347 LEIDLNNLEHNVKVLKRAMPQKCELMAVVKAEAYGHGLYEIATHLNKIGVKAFAVATIDE 406

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G+KLR Y     I +L    P + K +   +L     ++    +   L   G      ++
Sbjct: 407 GIKLRQYGVLGEILILGYTAPARAKELRKYDLTQ---TLIDYKYALLLDKQGYDVMTHIK 463

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA--CADDPSSHVNSVQLERFRTL 185
           VDTG +RLG   ++    +     K +    +     A    D+      +VQ+E F  L
Sbjct: 464 VDTGMHRLGFDAKDIEKISAVFSMKHIKVSGIYTHLCAADSVDEKDIFFTNVQIESFYNL 523

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVV 236
           ++  K       +  + SS G+L  P       R G+SLYG     N        ++ V+
Sbjct: 524 LNQLKEKGITIPKIHIQSSYGLLNYPELKCDYVRVGVSLYGVLSSPNDRTKLHLDLRPVL 583

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + ++R+IL+R+   GE V Y       RDSLIA+  +GYADGYP  LS            
Sbjct: 584 SLKSRVILLREIKKGESVGYSRSFVANRDSLIALLPVGYADGYPRNLS----------CG 633

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                I G+  P++GKI MD    D+TD  +++ G    + G     +I    VA ++ +
Sbjct: 634 KSYVLINGHQAPVVGKICMDQLAVDVTDIPNVKTGSIATLIGKDGKEEITAPMVAESAES 693

Query: 353 TNYDLLVRIGTRY 365
              +LL R+G R 
Sbjct: 694 ITNELLSRMGHRL 706


>gi|317507715|ref|ZP_07965420.1| alanine racemase [Segniliparus rugosus ATCC BAA-974]
 gi|316253968|gb|EFV13333.1| alanine racemase [Segniliparus rugosus ATCC BAA-974]
          Length = 386

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 102/390 (26%), Positives = 167/390 (42%), Gaps = 36/390 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S   ++  +D +AL +N   +   S  A+  AV+K NAYG G   +A  +  AG    
Sbjct: 1   MVSAPAVQATVDHSALAHNVRLLIQASAPAKVIAVLKANAYGHGAVPVARTVLAAGAAQI 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP------VISSVPQLTFYSK 114
            V +++E  +LR    +A I          E +      +       V +S         
Sbjct: 61  GVATLDEAFELRAGGIEAPIIAWLHAFDPSEAVAVFAEAVALGIELGVSTSTQLRAVAEA 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPS 171
            M        A++VDTG NR G + ++      +  N +     ++  + SHLA AD P 
Sbjct: 121 AMRADEPAVVAVKVDTGLNRGGFAREDWRKAFADLANAEAAGAVRVRAVFSHLANADRPE 180

Query: 172 SHVNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNY------HFQLTRPGISLY 220
              N+ Q    R  +     +        LA+S  +L  P         F  TRPG+++Y
Sbjct: 181 YRTNAEQASGLRDAVALARKAGLSPQLVHLANSPAVLTRPRALVDGVPAFNATRPGVAVY 240

Query: 221 GGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP 280
           G +    +   +   +T  AR+ L+++  AG+ VSYG       D+ +A+  IGYADG P
Sbjct: 241 GLSPIAGRDFGLIPAMTLTARVGLVKRIQAGDGVSYGHDFVAPTDTTLALLPIGYADGLP 300

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP 339
            +L+G             +  I G   P +G++ MD  + D+      +  GD   +FG 
Sbjct: 301 RSLAGKF-----------EVVIGGRRYPGVGRVCMDQVLVDLGPGRPRVREGDIATLFGS 349

Query: 340 ----DIKLDDVALASGTTNYDLLVRIGTRY 365
               +  +DD A A+GT NY+++ +I  R 
Sbjct: 350 GKDGEQTVDDWAKAAGTINYEIVTQIRGRV 379


>gi|83953866|ref|ZP_00962587.1| alanine racemase [Sulfitobacter sp. NAS-14.1]
 gi|83841811|gb|EAP80980.1| alanine racemase [Sulfitobacter sp. NAS-14.1]
          Length = 344

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 125/364 (34%), Positives = 191/364 (52%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A+  NW ++N ++G   T AV+K NAYGLG +++AP L   G + FFV   E
Sbjct: 4   ATLSIDLNAIAANWQALNKMTG-CDTGAVIKANAYGLGIDRVAPVLAAQGARKFFVAVAE 62

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G  PG   +I    L P+I+SV Q+      +     H + 
Sbjct: 63  EGVALRRVLGPGPAINVFAGHMPGDADMIRSAALTPMINSVDQM---IAHVEALPGHRFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+++G NRLG+   E       +  +     +LI+SHLACAD+P+  +N+ QL+ FR +
Sbjct: 120 VQLNSGMNRLGMDPAEWAALRDIALAQ---NPTLIMSHLACADEPNHPMNARQLKTFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ GI+LG +YHF LTRPGI +YGG    +       VVT +  +I +
Sbjct: 177 TDG-LNVPRSLAATGGIMLGRDYHFDLTRPGIGVYGGLPFADA----MPVVTLDVPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   G+ V YG      R +++A  A GYADG    L    +              +G 
Sbjct: 232 REVATGQTVGYGCAWTAPRPTMVATVAAGYADGLIRALGNGATFTH-----------EGR 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            +P++G+++MD+   D+T    +    ++Q+ G    +D VA  +GT  Y++L  +G RY
Sbjct: 281 KLPVVGRVSMDLITVDVTSLTEVPE--HLQLIGNYQSVDTVAGFAGTIGYEVLTALGARY 338

Query: 366 AKFY 369
            + Y
Sbjct: 339 DRVY 342


>gi|238897886|ref|YP_002923565.1| alanine racemase 1, PLP-binding, biosynthetic [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|259710068|sp|C4K4C4|ALR_HAMD5 RecName: Full=Alanine racemase
 gi|229465643|gb|ACQ67417.1| alanine racemase 1, PLP-binding, biosynthetic [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 358

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 18/363 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               I+L +L++N   +   +  +R  AVVK NAYG G   +A AL N     F V  +E
Sbjct: 4   ATAIINLKSLRHNLEKIQQYAPKSRLMAVVKANAYGHGLLTVAQALKN--ADYFSVARIE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  +   N I  +    +     + +         +
Sbjct: 62  EALTLRSGGIIKPILLLEGFFSLEDLAVLQVNHIETVIHNFEQLVALEKVRLPEPVRVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+ L++A  F     N     +   II+HL+  +     V   Q+  F   
Sbjct: 122 KIDTGMHRLGVRLEQADAFYQRLQNCPNVAKPIHIITHLSDVNPHHPVVTDQQIRSFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEARI 242
           +    G + S+A+S  ILL P  H  + RPGI+LYG +     I + + +  V+T ++ +
Sbjct: 182 VQGKPG-QKSIAASGAILLCPQSHRDVVRPGIALYGISPFEHFIGRDYGLLPVMTLQSPL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V Y G+      + + V AIGY DGYP +              G   +I
Sbjct: 241 IAVREHKAGETVGYAGEWISQTATFLGVLAIGYGDGYPQSA-----------PTGTPVWI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
               VPI+G+++MDM   D+    + +VGD   ++G  + L+ VA   G T Y+L+ ++ 
Sbjct: 290 NDRQVPIVGRVSMDMISVDLGRDATDKVGDRAVLWGDQLSLEKVASYIGYTAYELVSKLT 349

Query: 363 TRY 365
            R 
Sbjct: 350 GRV 352


>gi|251812207|ref|ZP_04826680.1| alanine racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876517|ref|ZP_06285383.1| alanine racemase [Staphylococcus epidermidis SK135]
 gi|251804304|gb|EES56961.1| alanine racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281294769|gb|EFA87297.1| alanine racemase [Staphylococcus epidermidis SK135]
          Length = 382

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/382 (23%), Positives = 158/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 2   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 62  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P + +N 
Sbjct: 122 NQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGNSMN- 180

Query: 177 VQLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++   K I     +S+G LL         R GISLYG         N    
Sbjct: 181 EQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++   AGE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 241 LRPSAQLVSETVQVKTLKAGETVSYGRTYIADEEMTIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 294 -----GAFVNVNGSQCEVIGRICMDQLIVKVP--SHVKTGEKVILMDNHVDSPQSAEAVA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 347 NKQGTINYEVLCNLSRRLPRIY 368


>gi|213964899|ref|ZP_03393098.1| alanine racemase [Corynebacterium amycolatum SK46]
 gi|213952435|gb|EEB63818.1| alanine racemase [Corynebacterium amycolatum SK46]
          Length = 537

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 168/393 (42%), Gaps = 37/393 (9%)

Query: 1   MHSNEFLRLK--IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S+    L   ++L A+ +N  ++ A++G +   AVVK + Y  G  + A A  + G  
Sbjct: 1   MTSSAPAILTHTVNLDAITHNVKTVKAIAGVSEFMAVVKADGYSQGALQTARAALDGGAT 60

Query: 59  DFFVTSVEEGVKLRLY-------TPQARIFVLYGIHPGQ---EKIIFDTNLIPVISSVPQ 108
              V +++E + +R              I             ++ +     + + S    
Sbjct: 61  QLGVATIDEALSVREELRTTLDDGHAIPILAWIWDAAATSLVQRAVAANIDLGLPSMAHA 120

Query: 109 LTFYSKLMSCGVSHPYALQVDTGFNRLGLSL-----QEALDFTHNSFNKKLGQLSLIISH 163
           L   +   +  V+    + VDTG  R G S+     + A+             ++   +H
Sbjct: 121 LAVANAGRALSVTPRVTVMVDTGLGRSGFSMANGDFEHAVAQLVELHKTGALNITGAFTH 180

Query: 164 LACADDPSSHVNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGIS 218
            ACAD+P +     Q + FR  I     +    +    A+S   L  P+  F + RPG++
Sbjct: 181 FACADEPGNESVDKQAQNFRAAIAALREAGLDELINHAANSPASLSRPDLAFDMVRPGLA 240

Query: 219 LYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
           +YGG   +  +H ++  +  EA +IL++K  AG+ VSYG      RD+ I +   GYADG
Sbjct: 241 IYGGEPIVGSTHGLRPAMRWEASVILVKKLPAGQSVSYGQTWTADRDTTIGIVPCGYADG 300

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
              + SG             +  I G   P +G++ MD  + D+     +EVGD   I G
Sbjct: 301 MMRSASGRF-----------EVSINGTRYPQVGRVCMDQFVVDLGPDTDVEVGDTAVIVG 349

Query: 339 P----DIKLDDVALASGTTNYDLLVRIGTRYAK 367
                +  LDD+A ASGT NY++L     R  +
Sbjct: 350 DPTLGEPGLDDLAKASGTINYEILTAPKGRSER 382


>gi|271962687|ref|YP_003336883.1| alanine racemase [Streptosporangium roseum DSM 43021]
 gi|270505862|gb|ACZ84140.1| Alanine racemase [Streptosporangium roseum DSM 43021]
          Length = 371

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 79/380 (20%), Positives = 142/380 (37%), Gaps = 28/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
               ++DL+A+++N   +   +  A    VVK + YG G      A    G        +
Sbjct: 3   PAEARVDLSAIRDNVALLGEHAPGAEIMVVVKADGYGHGMAACGRAALEGGATRLGTAYI 62

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
            E ++LR     A I                  +     +   +   +      GV+   
Sbjct: 63  REALELRAAGVTAPILSWIIPPGEPLDEAVGQGVELSAGTPALVDEIAAAAGRTGVAARV 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G +  +       +  ++      +    SH ACAD P       QL  
Sbjct: 123 HLKADTGLARGGAAPADWPALVDRAMARQFEGTIEVAGLWSHFACADIPGHPSVHAQLTA 182

Query: 182 FRTLI-------SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQ 233
           F   +       +    +   +A+S+  +L P  H+ + RPG++ YG +         ++
Sbjct: 183 FDDALAIAEKAGAGGSHVIRHIANSAATMLLPQAHYDMVRPGLATYGLSPVPELGGFGLR 242

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  ARI L ++   G  VSYG      R++ + +  +GYADG     +      +  
Sbjct: 243 PAMTLVARIALAKRVPVGSGVSYGHLYVTERETTLGLVPLGYADGILRHATNRAEVLAGG 302

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                 G            + MD  + D+ D   +  GD + +FG     +    + A +
Sbjct: 303 RRRRIAGR-----------VCMDQFVIDVGDDP-LAEGDEVILFGDGSRGEPTAQEWADS 350

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT  ++++ RIG+R  + Y
Sbjct: 351 LGTITHEIVTRIGSRVPRVY 370


>gi|27468592|ref|NP_765229.1| alanine racemase [Staphylococcus epidermidis ATCC 12228]
 gi|57867600|ref|YP_189248.1| alanine racemase [Staphylococcus epidermidis RP62A]
 gi|293366041|ref|ZP_06612729.1| alanine racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|38372172|sp|Q8CNK7|ALR_STAES RecName: Full=Alanine racemase
 gi|81673927|sp|Q5HME5|ALR_STAEQ RecName: Full=Alanine racemase
 gi|27316139|gb|AAO05273.1|AE016749_219 alanine racemase [Staphylococcus epidermidis ATCC 12228]
 gi|57638258|gb|AAW55046.1| alanine racemase [Staphylococcus epidermidis RP62A]
 gi|291319764|gb|EFE60122.1| alanine racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329734113|gb|EGG70431.1| alanine racemase [Staphylococcus epidermidis VCU045]
          Length = 382

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/382 (23%), Positives = 157/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 2   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 62  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P S +N 
Sbjct: 122 NQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGSSMN- 180

Query: 177 VQLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++   K I     +S+G LL         R GISLYG         N    
Sbjct: 181 EQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++    GE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 241 LRPSAQLVSETVQVKTLKVGETVSYGRTFIADEEMTIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 294 -----GAFVNVNGSQCEVIGRICMDQMIVKVP--SHVKTGEKVILMDNHVDSPQSAEAVA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 347 NKQGTINYEVLCNLSRRLPRIY 368


>gi|329726098|gb|EGG62570.1| alanine racemase [Staphylococcus epidermidis VCU144]
          Length = 382

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 91/382 (23%), Positives = 157/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 2   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 62  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P S +N 
Sbjct: 122 NQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGSSMN- 180

Query: 177 VQLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++   K I     +S+G LL         R GISLYG         N    
Sbjct: 181 EQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++    GE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 241 LRPSAQLVSETVQVKTLKVGETVSYGRTFIADEEMTIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 294 -----GAFVNVNGSQCEVIGRICMDQMIVKVP--SHVKTGEKVILMDNHVDSTQSAEAVA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 347 NKQGTINYEVLCNLSRRLPRIY 368


>gi|328478057|gb|EGF47943.1| alanine racemase [Lactobacillus rhamnosus MTCC 5462]
          Length = 379

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 152/379 (40%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNVQHEVARLKKQTQLFAVVKADAYGHGMLRVAHVAKAAGASGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SSV  L     ++      P
Sbjct: 67  LLDEALDLRAANYTEPVLVLGIVPSQYAAIAAAQTVSLPLSSVDWLKQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                + +DTG  R+G +  +           + K   +  I +H A ADDP       Q
Sbjct: 127 PLRLHIALDTGMGRIGFTDDQTLLDAVAFIQAHPKAFTIEGIFTHFATADDPDDAYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           + +F  +++        +   +S+  L     +  + R G+++YG     +       P+
Sbjct: 187 VAKFNHMVALLPHRPRYVHVSNSATSLWHAACNGNMVRYGVAIYGLNPSGDAIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   +   D  I    +GYADG+   L G       
Sbjct: 247 EPALSLESELTFCKQVHAGDGISYGVTYRAKGDEFIGTVPVGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G+   I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGHPCEIVGRICMDQFMIRLPKAYPA--GTKVVLIGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   + +R  +
Sbjct: 353 YSHTIHYEIACNLTSRLKR 371


>gi|204927774|ref|ZP_03218975.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323116|gb|EDZ08312.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 356

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 99/367 (26%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGAILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   +            +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERVQTVWQQLRTMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|295094258|emb|CBK83349.1| alanine racemase [Coprococcus sp. ART55/1]
          Length = 377

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 92/383 (24%), Positives = 159/383 (41%), Gaps = 25/383 (6%)

Query: 1   MHSNEFL-R--LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M++  F  R    IDL  L++N  ++   L       AV+K + Y  G   + P L   G
Sbjct: 1   MNNRPFAGRTAAVIDLAKLRSNIANIKSRLKPGVEFIAVMKGDGYRHGIAGLYPTLKECG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKL 115
           +  + V   EEG  LR       I +L              +L   + S+       +  
Sbjct: 61  IDSYAVAIWEEGKMLRDAGATESILILGDTADDMLDEAAKYDLDLTVFSMEGAENMAAAA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
              G      ++++TG NR+G    QE+ D            ++ I +H A AD+     
Sbjct: 121 RRAGKKQNVQIKLNTGMNRIGFPVCQESFDTIKKICEMDDLNVTGIFTHFARADEGDHTS 180

Query: 175 NSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-- 227
              QL+ +   ++  + +     +  +A+S  IL+ P       R G  LYG T   +  
Sbjct: 181 ARKQLDLYLHAVNELEKMGVVIPKHHVANSPAILMLPEAQLDAVRCGDILYGLTPSDDFD 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
            K+  +Q +++    + ++++   G  + YGG     R + IA   +G+ADGY   LS  
Sbjct: 241 WKNSGLQEILSWYTYVAMVKEVPTGSEIGYGGTFVTERPTKIATLPVGFADGYSRYLSN- 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                      GK  I G+  PI+G++ MD  M D+TD   ++ GD + + G  + ++D+
Sbjct: 300 ----------KGKVIINGHEAPIIGRVCMDQCMADVTDIPDVQRGDTVTLLGEGMSIEDM 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T    ++  I  R  + Y
Sbjct: 350 ANMLDTNVDVIVCNISVRVPRVY 372


>gi|260426149|ref|ZP_05780128.1| alanine racemase [Citreicella sp. SE45]
 gi|260420641|gb|EEX13892.1| alanine racemase [Citreicella sp. SE45]
          Length = 351

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 186/365 (50%), Gaps = 26/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +L IDL A++ NW ++   +      AVVK + YGLG  ++APAL   G + FFV +  
Sbjct: 10  AQLTIDLAAIRANWRALANATTG-EAGAVVKADGYGLGVARVAPALAAEGARRFFVATAH 68

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG+ +R        I V  G   G  +II D  L P+++S+ Q+    + +     H + 
Sbjct: 69  EGIAVRRALGAGPEICVFSGHMNGDAEIIRDHRLTPMLNSIDQML---RHVEALPGHSFG 125

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +  +   +  LI+SHLACAD+PS  +N+ QL  FR +
Sbjct: 126 IQLDSGMNRLGMEPAEWSALREIALAQ---KPVLIMSHLACADEPSHGMNAFQLRTFREM 182

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SL+++ GILLGP+YHF+LTRPG+ +YGG    +     + VV     +I +
Sbjct: 183 TDG-LDVPRSLSATGGILLGPDYHFELTRPGVGIYGGQPFADA----RAVVELMLPVIQV 237

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG        + +A  A GYADG    L              G  +    
Sbjct: 238 RDVAPGESVGYGNAHVARVPTRVATVAAGYADGIHRAL-----------AAKGAVWAGDT 286

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
              I+G+++MD+   D+T     +V + +++ G    +D VA A GT  Y++L  +G RY
Sbjct: 287 RCKIIGRVSMDLITVDVTALN--KVPEQLELLGRHQTVDMVADAVGTIGYEILTGLGARY 344

Query: 366 AKFYT 370
           A+ YT
Sbjct: 345 ARAYT 349


>gi|85710981|ref|ZP_01042042.1| Alanine racemase [Idiomarina baltica OS145]
 gi|85695385|gb|EAQ33322.1| Alanine racemase [Idiomarina baltica OS145]
          Length = 384

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 172/376 (45%), Gaps = 22/376 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R +I LT L++N   + +         V+K + YG G  ++A A+ +  V+ + V 
Sbjct: 19  HRQTRARILLTNLRDNAKQLKSYIDQQPMLGVIKADGYGHGATEVAHAITDY-VEKYAVA 77

Query: 64  SVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++E + LR       I +L G        +  +    PVI +  Q+   S++ S     
Sbjct: 78  FIDEAIALRGSGIDKPIVILQGVYSTEDWLLCAEQQFEPVIHNAQQIDCLSEITSEANRV 137

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+ D+G +RLG    +            L    ++++H A AD+P S + ++QLERF
Sbjct: 138 NVWLKQDSGMHRLGFFADDVEGAVGQLRAHALINQIVLMTHFAEADNPESPLTAIQLERF 197

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQ------LTRPGISLYGGTDK---INKSHPMQ 233
             ++   +     ++ ++   +  +            R GI+LYG       +  +  ++
Sbjct: 198 YAVLHAVRDKIDGVSVANSAFMLGDDVLDAMGLTKWFRAGIALYGQNPSQADLTDNVELK 257

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  EA +I +R    GE V YG + +  R+S IA  AIGYADGYP +L          
Sbjct: 258 PTMALEAPVIALRIIQPGETVGYGSRWRAQRESRIATVAIGYADGYPRSL---------- 307

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
              G    I G +  ++G+I+MDM   D+TD   IE+GD ++++G  + +  +A  + T 
Sbjct: 308 -PDGTPMIINGQVGCLVGRISMDMITVDVTDIEGIELGDNVELWGEQLPIQVIADQARTI 366

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+L  ++  R  + Y
Sbjct: 367 TYELFAQVTRRVPRVY 382


>gi|254514051|ref|ZP_05126112.1| alanine racemase [gamma proteobacterium NOR5-3]
 gi|219676294|gb|EED32659.1| alanine racemase [gamma proteobacterium NOR5-3]
          Length = 356

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 88/367 (23%), Positives = 153/367 (41%), Gaps = 17/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
                +I    + +N   +  L+ ++R  A VK +AYG     I+ A     V  F V S
Sbjct: 3   RPTYARIFPEHIAHNARRVRELAPDSRIMACVKSDAYGHDIG-ISSAALADHVDGFAVAS 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + +R       + +L G     E        + +  +      + +  + G     
Sbjct: 62  MNEALSVRSLHADKPVLMLEGPQTFDEIAEAAHKKLTLCINEWHQLEWLERSAPG-ELSC 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +++DTG +RLG S +                  ++ +H + AD P  +  S QL  F  
Sbjct: 121 WMKIDTGMHRLGFSPESVPQALARLTPHIKTSDLVLCTHFSSADLPGDNGVSEQLRCFDE 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEAR 241
             +      ++  +S+ I+     H    RPG  LYGG+        S  ++  +   A 
Sbjct: 181 STAQTSFAHSTA-NSAAIIRTATSHRDWVRPGYMLYGGSPLADATPASVNLKPAMEFSAE 239

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R+   GE V Y G+ +  R S IA  A GY DGYP                G    
Sbjct: 240 VISLRELAQGERVGYSGRWEARRPSKIATIAAGYGDGYPRHA-----------PDGTPVL 288

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I+G  +P+ G+++MDM   D+TD+ ++++G    ++G    +D++A  S T  Y+LL  +
Sbjct: 289 IEGQCLPLAGRVSMDMITVDVTDNPAVKIGSRAILWGAQPGVDEIARHSSTIGYELLAGM 348

Query: 362 GTRYAKF 368
             R  + 
Sbjct: 349 PKRVPRI 355


>gi|82703234|ref|YP_412800.1| alanine racemase [Nitrosospira multiformis ATCC 25196]
 gi|123544120|sp|Q2Y763|ALR_NITMU RecName: Full=Alanine racemase
 gi|82411299|gb|ABB75408.1| alanine racemase [Nitrosospira multiformis ATCC 25196]
          Length = 357

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 165/369 (44%), Gaps = 18/369 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  ++  ID  AL+ N   +   +  +R  AV+K +AYG G      A   A  + F + 
Sbjct: 2   SRPIQALIDPAALERNLAIVRRHAPRSRVMAVIKADAYGHGLLC--AAEALAEAEGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++  V+LR    +  I +L G     E    +   +  +   P+     + +    +  
Sbjct: 60  ELDAAVRLREAGYRQTILLLEGFFDIDELSWIEQYRLSTVVHHPEQLAMLEAVRRRATLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERF 182
             L++++G NRLG +  E      +       +   +++H ACAD+P  +   + QL+ F
Sbjct: 120 VFLKLNSGMNRLGFTPTEFPAALEHLKANPAVRQITLMTHFACADEPDRNDSIAAQLQCF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
             L +  + +  SLA+S+ IL  P  H    RPGI LYG +       +   +Q  +T  
Sbjct: 180 N-LAAGGRYMPRSLANSAAILRFPEAHADWVRPGIMLYGSSPLAHTTAEQLGLQPAMTVS 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +RII ++     + V YG   +      + + A GYADGYP                G  
Sbjct: 239 SRIISVQTLRPNDGVGYGHAFRAGSSMRVGIVAGGYADGYPRHA-----------PTGTP 287

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             +KG    I+G+I+MDM   D+++     VG  + ++G  + +D+VA A+GT  Y+LL 
Sbjct: 288 VLVKGRRTRIVGRISMDMLHVDLSEIEDAGVGSPVTLWGRGMPVDEVARAAGTLGYELLC 347

Query: 360 RIGTRYAKF 368
            I  R  + 
Sbjct: 348 AIAPRMQRV 356


>gi|15827104|ref|NP_301367.1| alanine racemase [Mycobacterium leprae TN]
 gi|221229582|ref|YP_002502998.1| alanine racemase [Mycobacterium leprae Br4923]
 gi|584747|sp|P38056|ALR_MYCLE RecName: Full=Alanine racemase
 gi|467127|gb|AAA17309.1| alr [Mycobacterium leprae]
 gi|13092652|emb|CAC29883.1| putative alanine racemase [Mycobacterium leprae]
 gi|219932689|emb|CAR70468.1| putative alanine racemase [Mycobacterium leprae Br4923]
          Length = 388

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 159/379 (41%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+  N   +   +G A+   V+K +AYG G  ++A A   AG  +  V +V
Sbjct: 13  LAEAVVDLGAIDYNVRVLREHAGMAQLMVVLKADAYGHGATQVALAALAAGAAELGVATV 72

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           +E + LR     A +                 ++   +SSV Q       +   G +   
Sbjct: 73  DEALALRADGISAPVLAWLHPPGIDFGPALLADVQIAVSSVRQLDELLDAVRRTGRTATV 132

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLER 181
            ++ DTG NR G+   +            +        ++SHL  AD P +  N VQ +R
Sbjct: 133 TVKADTGLNRNGVVTDQYPAMLTALQRAVVEDAVRLRGLMSHLVYADQPDNPSNDVQGKR 192

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  L++           A L++SS  +  P+  + L RPGI++YG +   ++    +   
Sbjct: 193 FAALLAQAHEQGLRFEVAHLSNSSATMSRPDLAYDLVRPGIAVYGLSPVPSRGDMGLIPA 252

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + +++   AGE VSYG       D+ +A+  +GYADG   +L G          
Sbjct: 253 MTVKCAVAMVKSIRAGEGVSYGHDWIAQHDTNLALLPVGYADGVFRSLGGRLD------- 305

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDVALAS 350
                 I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 306 ----VLINGKRRPGVGRICMDQFVVDLGPGPIDVAEGDEAILFGPGARGEPTAQDWADLL 361

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++  +  R  + Y
Sbjct: 362 GTIHYEVVTSLRGRITRTY 380


>gi|58336608|ref|YP_193193.1| ala racemase [Lactobacillus acidophilus NCFM]
 gi|227903165|ref|ZP_04020970.1| ala racemase [Lactobacillus acidophilus ATCC 4796]
 gi|81311540|sp|Q5FMB2|ALR_LACAC RecName: Full=Alanine racemase
 gi|58253925|gb|AAV42162.1| ala racemase [Lactobacillus acidophilus NCFM]
 gi|227868970|gb|EEJ76391.1| ala racemase [Lactobacillus acidophilus ATCC 4796]
          Length = 376

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 147/382 (38%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N  + M  L    +  AVVK NAYG G  ++A      G   F V
Sbjct: 6   HRPAAVKVNLGAIRRNLENEMKHLDPGQKMLAVVKANAYGHGAVEVAKVAEEVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKI-IFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             ++EG++LR       I VL  + P    I   +   + V +          L    + 
Sbjct: 66  AVLDEGLQLRHADIVKPILVLGVVSPKYAPIAAVNNISLTVPNFEWLKEAEKYLAKENLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +  +     +             + +H A AD         QLE
Sbjct: 126 LKIHLGIDSGMGRIGFNEDDEFIEANKFLENNDQFFVEGMFAHFASADSADESYFEHQLE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------INKSHP 231
           +F  + S        +   +++  +   N    L R GI +YG           +N    
Sbjct: 186 KFNHMKSLLTVKPKWIHVSNTAASIFHKNIKSDLVRFGIGIYGLNPSSNPASADLNPDIK 245

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++ E+ +  ++    G+ VSYG      +D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHKGDGVSYGSTFVADKDTIIGTVPVGYADGWIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +     PI+G+I MD  M ++ + + +  G  + I   +      +   A
Sbjct: 301 -------KVKVGDKYCPIVGRICMDQFMVELPEKMPV--GTKVVIISNNPDDPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVNTIHYEVACLLNDRLPRIY 373


>gi|84502660|ref|ZP_01000779.1| alanine racemase [Oceanicola batsensis HTCC2597]
 gi|84389055|gb|EAQ01853.1| alanine racemase [Oceanicola batsensis HTCC2597]
          Length = 343

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 129/363 (35%), Positives = 188/363 (51%), Gaps = 25/363 (6%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + +DL AL  NW +++A S     T AV+K N YGLG + +A AL  AGV+ FFV   EE
Sbjct: 1   MTVDLDALVANWRALDAASSPETETGAVIKANGYGLGVQPVARALARAGVRRFFVAVAEE 60

Query: 68  GVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G  +R    P   I V  G   G   +I D NLIP+++SV Q+    + +     HP  +
Sbjct: 61  GAAVREAVGPNVEINVFSGHMRGDTDMIGDLNLIPMLNSVDQML---RHVEALPGHPLGI 117

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG NRLG+  +E +     + +       LI+SHLACAD+P   +N  QL +F+ + 
Sbjct: 118 QLDTGMNRLGMEPEEWMAVRETALDLSPN---LIMSHLACADEPDHPMNIRQLRQFKAMT 174

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           S   G+  SLA++ GILLGP YHF +TRPG+ L+GG    +       VV  +  +I IR
Sbjct: 175 SGLGGVPLSLAATGGILLGPEYHFDVTRPGVGLFGGLPFADAE----PVVRLDLPVIQIR 230

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +  AGE V YG        ++IA  A GYADG    +    S ++               
Sbjct: 231 ELEAGETVGYGNTWTAPDRTVIATVAAGYADGIHRLMGPRTSLYA-----------GDTP 279

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            P+ G+I+MD+   DIT       G  + + GP   +D +A  + T  Y++L  +G R +
Sbjct: 280 CPVRGRISMDLIGVDITHLTEEPQG--LTLLGPQQTVDVIAENAQTIGYEVLTSLGGRMS 337

Query: 367 KFY 369
           + Y
Sbjct: 338 RRY 340


>gi|310778168|ref|YP_003966501.1| alanine racemase [Ilyobacter polytropus DSM 2926]
 gi|309747491|gb|ADO82153.1| alanine racemase [Ilyobacter polytropus DSM 2926]
          Length = 377

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 103/369 (27%), Positives = 157/369 (42%), Gaps = 21/369 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                I+L  L  N + +   +G+ +   V+K + YG+G  + A  L   GV++F V   
Sbjct: 2   RAWADINLDNLIYNLNIIKEFAGSKKIMCVIKADGYGMGAVECARILSENGVENFGVACY 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EEG +L     +  I +L                   ISS  Q+ F        +     
Sbjct: 62  EEGYELYKAGIKGEILLLGATPFENIADAVKCGFQITISSFEQIDFL---RRNNLHPEVH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFRT 184
           ++VDTG  RLG S +EAL       ++ +  +  + SHL+ AD P        Q+E+F+ 
Sbjct: 119 IKVDTGMGRLGFSHEEALKAIKIIRDENIADIVGVYSHLSVADMPEKDQFTLDQIEKFKV 178

Query: 185 LISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKI-NKSHPMQTVVTAEARI 242
                      + +SSG+L   +     L R GI L+G            + V + + +I
Sbjct: 179 FEKMESIKYKHILNSSGLLRFADATESNLVRVGIILHGVVPFESELQKKFKPVFSFKTKI 238

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I + K      VSYG  +      LIA  A+GYADG+    S            GG   I
Sbjct: 239 IFLNKITEKTYVSYGNTETAEPGDLIATMAVGYADGFVREFSN-----------GGIVEI 287

Query: 303 KGYMVPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            G    ++GKI MDMTM  I +     ++VG  + I G DI     A   GT  Y++++ 
Sbjct: 288 DGVGCRVIGKICMDMTMIKIPEELKDKVQVGTEVTIIGKDIL--KKAECIGTIPYEIMIG 345

Query: 361 IGTRYAKFY 369
           +G R A+FY
Sbjct: 346 LGRRVARFY 354


>gi|225849897|ref|YP_002730131.1| alanine racemase [Persephonella marina EX-H1]
 gi|225644813|gb|ACO02999.1| alanine racemase [Persephonella marina EX-H1]
          Length = 359

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 106/370 (28%), Positives = 168/370 (45%), Gaps = 27/370 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSVE 66
             +ID   L  N H++   S      AVVK +AYG G  +I+  L   + V+   V + E
Sbjct: 6   WAEIDSKRLIQNTHNVYNYSKKG-ILAVVKADAYGHGSVEISKILEKISYVRKLCVATAE 64

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG +LR    +  I VL G+   +     + NL PVIS   QL           S    L
Sbjct: 65  EGKELREGGIKKEILVLGGVLKEELDYFIEYNLQPVISDFDQLYLLKD----RFSGSVHL 120

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG +RLG  +++          K   ++  ++SH   AD     +   Q+E+F+ ++
Sbjct: 121 KFDTGMHRLGFYIEDTDRVIKYIKEK-NIKVEGLMSHFPSADVDP-ELTGHQIEKFKKIV 178

Query: 187 ----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
               +           +S  L+    +    R GISLYG     N    ++TV++ +++I
Sbjct: 179 DIFKNEGINPRFIHIQNSAGLVYRCDYCNCVRVGISLYGEKPSDNFPLNIKTVMSVKSKI 238

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I ++    G++VSYGG  K  +D  I + + GYADG P  LS             G   +
Sbjct: 239 ISVKGIKKGDMVSYGGSFKADKDMKIGIVSFGYADGLPRELSNR-----------GFFLV 287

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLL 358
           K     ILG +TMDMT+ D++    ++VGD + I G     +I  +D+A    T  Y+++
Sbjct: 288 KDKRSRILGNVTMDMTIIDLSGIEDVKVGDTVLIVGKNGKEEISFNDIAKMCNTIPYEIM 347

Query: 359 VRIGTRYAKF 368
            RI  R  + 
Sbjct: 348 CRISKRVKRI 357


>gi|123442531|ref|YP_001006508.1| alanine racemase, catabolic [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089492|emb|CAL12340.1| alanine racemase, catabolic [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 355

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 20/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   ++L+AL +N + + +  G A+  +VVK NAYG G  ++   L       F +  
Sbjct: 3   RPISATLNLSALHHNLNVVRSHVGTAKIWSVVKANAYGHGLARVWQGLAA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G+   Q+ ++ D   +             K          
Sbjct: 61  LNEAILLREQGWQGPILLLEGVFQAQDLVLLDHYRLTTAVHSDWQLEVIKTARLTAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+ ++G NRLG  + +A      + +        ++SH A AD+P       Q  + + 
Sbjct: 121 YLKFNSGMNRLGFPIGQAEAVWQWANSLSNVGEITLMSHFANADNPIG--VDEQFAQIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             S +       A+S+ IL  PN H+   RPGI LYG +   +        ++ V+   +
Sbjct: 179 -ASGHIPAARCFANSAAILRNPNTHYDWVRPGIILYGASPSGDIADIAGLGLRPVMGLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ V YG + + T    I V A GYADGYP                G   
Sbjct: 238 EIIALQSLSAGQSVGYGSRYRATGVQRIGVVACGYADGYPR-----------VAPTGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     ++G  ++I+G ++ +D+VA A+GT  Y+L+  
Sbjct: 287 MVDGILTHTVGAISMDMLTVDLTPCPQAQIGSKVEIWGENVPIDNVAQAAGTVGYELMCA 346

Query: 361 IGTRY 365
           + +R 
Sbjct: 347 LASRV 351


>gi|134293333|ref|YP_001117069.1| alanine racemase [Burkholderia vietnamiensis G4]
 gi|134136490|gb|ABO57604.1| alanine racemase [Burkholderia vietnamiensis G4]
          Length = 373

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 91/364 (25%), Positives = 154/364 (42%), Gaps = 21/364 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AV+K NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPDAVRHNLDFIRRTAARSRVWAVIKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + D + + V     +                
Sbjct: 61  LDEAVRVRELGWDKPVLLLEGIFEPVDVELADRHRLTVAVHCDEQLDLLIAAQPQRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          ++ H A AD+      + QL +F  
Sbjct: 121 QLKMNSGMNRLGYRPHLFRAAWERAAAAPSIGNITLMMHFANADEGE---VAWQLNQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             +   G E S ++S+ +L  P  H    RPG  LYG +           P+   +T  +
Sbjct: 178 ATAGIPG-ERSTSNSAAVLWHPQAHRDWVRPGTILYGASPTGASRHIADTPLMAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    +   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPQETVGYGRRFTAEQPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G M  ++G+++MDM   D+T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  
Sbjct: 286 AVDGVMTRVIGRVSMDMLTVDLTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCA 345

Query: 361 IGTR 364
           +  R
Sbjct: 346 LARR 349


>gi|228474910|ref|ZP_04059639.1| alanine racemase [Staphylococcus hominis SK119]
 gi|314935973|ref|ZP_07843323.1| alanine racemase [Staphylococcus hominis subsp. hominis C80]
 gi|228271142|gb|EEK12522.1| alanine racemase [Staphylococcus hominis SK119]
 gi|313655979|gb|EFS19721.1| alanine racemase [Staphylococcus hominis subsp. hominis C80]
          Length = 381

 Score =  256 bits (654), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 157/376 (41%), Gaps = 26/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L +DL A+  N++    L  +     V+K N YGLG  KIA  L N G Q F V +
Sbjct: 7   RPTYLNVDLDAILYNYNIFKTLQSDKLVIPVIKANGYGLGSVKIAEILENNGAQFFAVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E ++LRL+   A++ VL  I P         ++   + S   L      +     H Y
Sbjct: 67  LDEAIELRLHNINAKLLVLGAISPKDINKAIQYDITLTVPSQFWLERAIHYIEDNSDHVY 126

Query: 125 -ALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++DTG  RLG+   +E     +            + +H A AD+P   +   Q   F
Sbjct: 127 LHVKLDTGMGRLGIKTLEEYQLVINLIKEHPTLIFDGVFTHFANADEPGDSM-KQQYAFF 185

Query: 183 RTLISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
             L++  +  +   A +S   L  N       R GISLYG        + +   +   A+
Sbjct: 186 EELVTKAERPKYIHAQNSAGALLANCKLCNALRLGISLYGYYPSEYVRNEVDVQLKPSAK 245

Query: 242 ----IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++  +    G+ VSYG     T    IAV  IGYADG+   + G            
Sbjct: 246 LMTQVVQTKYLNPGDSVSYGSTFTATEKMKIAVLPIGYADGFLRAMQGFA---------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVALASGTT 353
               +  +   I+G++ MD  +  + D   ++ GD + +   ++     ++ +A+   T 
Sbjct: 296 --VNVNQHQCEIIGRVCMDQMIISVPD--DVKEGDEVILIDNNLNSSQAVEALAIKQNTI 351

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  +G R  + Y
Sbjct: 352 NYEVLCNLGRRLPRIY 367


>gi|227485012|ref|ZP_03915328.1| possible alanine racemase [Anaerococcus lactolyticus ATCC 51172]
 gi|227237009|gb|EEI87024.1| possible alanine racemase [Anaerococcus lactolyticus ATCC 51172]
          Length = 372

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 154/368 (41%), Gaps = 27/368 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L++++  ++NN   +  L+  ++  AVVK NAYGLG + +   + +  V  F V  + EG
Sbjct: 6   LEVNIDKIRNNIIKIKNLNHRSKFCAVVKANAYGLGSDIVGREIEDL-VDYFAVARLSEG 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR    +  I +L  +        F+ ++   +  +            G      L +
Sbjct: 65  ILLRRAGIKKPILILGYVGLDDISKCFENDIDISVYDLGLAKEID---KLGYKLKAHLVL 121

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG  R+G    +  +           ++    SH + AD+  +     Q E F  +I  
Sbjct: 122 DTGHGRIGFRADQIEN-IRQLKTLSNIKIISAFSHFSTADEEDNSFTEKQEEIFDYIIEQ 180

Query: 189 YKG---IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVTAEAR 241
            K    +E    ++S   +       + R GI LYG         N    ++      + 
Sbjct: 181 IKNDFDLEFVHLANSAGTIRQKIFKDMYRIGICLYGLYPSEVVRDNTEIKLEKTFKLYSF 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  I+    G  +SYG     ++   +A  AIGYADGY    S +           GK +
Sbjct: 241 VHFIKNIDKGTPISYGRTFVSSKPMKVATVAIGYADGYCRAFSNM-----------GKVY 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I GY   +LG++ MD  M D+T    +++GD ++I+  +I  D  A   GT +Y+L+  I
Sbjct: 290 INGYGCKVLGRVCMDQMMVDVTGL-DVKIGDRVEIY-KEIDKD--ANLIGTISYELMTNI 345

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 346 SMRVKRIY 353


>gi|205372263|ref|ZP_03225077.1| alanine racemase [Bacillus coahuilensis m4-4]
          Length = 367

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 88/355 (24%), Positives = 144/355 (40%), Gaps = 25/355 (7%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           L+ +    AVVK N YG G  ++A A   AG     V  ++E + LR +     I VL  
Sbjct: 2   LTDDVEAFAVVKANGYGHGDIQVAKAALQAGANGIAVAFLDEAINLREHGVTEPILVLGA 61

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
             P   ++  +  +   +     +                ++ DTG NRLGL   EAL  
Sbjct: 62  TRPEYARVAAEKGISLTVYEESWIQEVKHFTPFTNPLALHIKCDTGMNRLGLKSVEALMR 121

Query: 146 THNSFNKKLG-QLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA--SSSGI 202
                       L  + +H A +D+        Q+  F   +   K     +   +S G 
Sbjct: 122 MEEEIESNSSLVLEGVFTHFATSDEIERSYTKRQIALFHDYLHALKKRPRYVHAGNSGGA 181

Query: 203 LLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEARIILIRKALAGELVSYGG 258
           L      F + R GI++YG T     +H     +  +++   +I+ I++   GE +SYG 
Sbjct: 182 LRFSEAKFNMVRIGIAMYGLTPSPEITHELTVSLSPIMSIHTKIVHIKELPKGEKISYGA 241

Query: 259 QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318
             +   +  IA   IGYADG+   L G             +  ++G  VPI+G+I MD  
Sbjct: 242 TYETQDNEWIATIPIGYADGWLRKLQGQ------------EVLVEGERVPIVGRICMDQC 289

Query: 319 MFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           M  +     + VG  + + G      I ++++A    T NY++   I TR  + Y
Sbjct: 290 MIKLP--REVPVGTIVTLIGTQGSETITMEEIADKMDTINYEVPCIISTRVPRVY 342


>gi|238785910|ref|ZP_04629876.1| Alanine racemase, catabolic [Yersinia bercovieri ATCC 43970]
 gi|238713179|gb|EEQ05225.1| Alanine racemase, catabolic [Yersinia bercovieri ATCC 43970]
          Length = 373

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L+AL +N   +    G+A+  +VVK NAYG G  +I   L       F +  
Sbjct: 19  RPIAATLHLSALHHNLSLIRRHVGSAKIWSVVKANAYGHGLARIWQGLAA--TDGFALLD 76

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+  + D   +  I                     
Sbjct: 77  LNEAILLREQGWQGPILLLEGFFQPQDLALLDHYRLTTIVHSDWQLEAINAARLSAPLNI 136

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG  + +A      + +        ++SH A AD+        Q  R + 
Sbjct: 137 YLKLNSGMNRLGFPVGQADAVWQWANSLSNVAEVTLMSHFANADNHIG--THEQFSRIQQ 194

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             S +       A+S+ IL  P  H+   RPGI LYG +   N        ++ V+   +
Sbjct: 195 -ASGHISATRCFANSAAILHAPETHYDWVRPGIILYGASPSGNIADIAEIGLRPVMHLHS 253

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG  V YG + + T    I V A GYADGYP                G   
Sbjct: 254 EIIAVQALSAGHQVGYGSRYRATGAQRIGVVACGYADGYPRLA-----------PSGTPI 302

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     +VG  ++I+G ++ +D+VA A+GT  Y+L+  
Sbjct: 303 RVDGILTQTVGAISMDMLTVDLTPCPQAQVGSQVEIWGANLPIDNVAAAAGTVGYELMCA 362

Query: 361 IGTRYA 366
           +  R  
Sbjct: 363 LAARVP 368


>gi|295676844|ref|YP_003605368.1| alanine racemase [Burkholderia sp. CCGE1002]
 gi|295436687|gb|ADG15857.1| alanine racemase [Burkholderia sp. CCGE1002]
          Length = 356

 Score =  256 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 146/348 (41%), Gaps = 22/348 (6%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
              +  ++  AVVK NAYG G  ++ P L       F +  +EE VKLR       I +L
Sbjct: 22  RRHAPKSKIWAVVKANAYGHGLARVFPGLRA--TDGFGLLDLEEAVKLRELGWAGPILLL 79

Query: 84  YGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEA 142
            G   P    +I   +L   + S  QL                L+++TG NRLG ++++ 
Sbjct: 80  EGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVNIQLKMNTGMNRLGYTVEKF 138

Query: 143 LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGI 202
                 +   +      +++H + AD       + Q+E F        G   SL++S+  
Sbjct: 139 RAAWERARACQGVGQITLMTHFSDADAERGI--AHQMEAFERGAQGIAGAR-SLSNSAAT 195

Query: 203 LLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGG 258
           L  P  HF   RPGI LYG +            +Q  +T  + +I ++    G  V YG 
Sbjct: 196 LWHPEAHFDWVRPGIILYGASPSGVTAAIDGTGLQPAMTLASELIAVQTLGEGSSVGYGS 255

Query: 259 QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318
                    I V A GYADGYP                G    + G    I+G+++MDM 
Sbjct: 256 TFTARAPMRIGVVACGYADGYPR-----------VAPEGTPVIVDGVRTRIVGRVSMDML 304

Query: 319 MFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
             D+T   +  VG  ++++G  + +D+VA A GT  Y+L+  +  R  
Sbjct: 305 TVDLTPVPTANVGSRVELWGTALPIDNVAQACGTIGYELMCAVAPRVP 352


>gi|295689700|ref|YP_003593393.1| alanine racemase [Caulobacter segnis ATCC 21756]
 gi|295431603|gb|ADG10775.1| alanine racemase [Caulobacter segnis ATCC 21756]
          Length = 360

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 135/371 (36%), Positives = 189/371 (50%), Gaps = 14/371 (3%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M      RL IDL AL  N  ++ A +G+A  A  VK NAYGLG  ++A  L+  GV+ F
Sbjct: 1   MTDLHDARLTIDLDALAANHAALQARAGDAEVAPAVKANAYGLGAARVADRLWAEGVRSF 60

Query: 61  FVTSVEEGVKLRLYTPQ--ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           +V  + EGV LR       A I+VL G  PG    +    L PV++S+PQ+  ++     
Sbjct: 61  YVARLAEGVALRAALGDREAAIYVLDGATPGAGDALEGARLTPVLNSLPQIEAWNAQARA 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G     AL +DTG NRLGL  +E       +   K   L L+ISHLACAD P   +N+ Q
Sbjct: 121 GR-LKAALHLDTGMNRLGLRPEELKVLLGATDRLKRLDLELVISHLACADVPDHPMNTRQ 179

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           LERF   ++       S A+S+G+ LG  Y F   RPGISLYGG  +      ++ V T 
Sbjct: 180 LERFSEAVAQLPNARKSFANSAGLFLGEAYRFDQARPGISLYGGGPEGRPHPEIRAVATV 239

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA I+ +R    GE V YG        + IA+   GYADG P                 G
Sbjct: 240 EAPILQVRVVPRGETVGYGATWTAPDTTRIAIVGAGYADGVPRA-----------SHPKG 288

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           + +  G    +LG+++MD+   D+TD  +   G  +++ G ++ +DD A A+GTT Y+LL
Sbjct: 289 QVWFDGARRQMLGRVSMDLMAVDVTDCDAARPGAMVELLGSNMPIDDAATAAGTTAYELL 348

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 349 TNIAPRARRIY 359


>gi|241889490|ref|ZP_04776789.1| alanine racemase [Gemella haemolysans ATCC 10379]
 gi|241863797|gb|EER68180.1| alanine racemase [Gemella haemolysans ATCC 10379]
          Length = 371

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 168/382 (43%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++    L++DL A+ NN++ + AL+      A+VK ++YGLG   IA  LY  GV+ F
Sbjct: 1   MINDRPTELRVDLNAILNNYNKLTALNNKKTGIAIVKADSYGLGARAIANHLYKNGVRHF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCG 119
              ++EE ++L+     + + VL   +P   K   + N  +   S V       ++ +  
Sbjct: 61  ATATLEEALELKDVIFDSMVLVLGVTNPQNVKYAVENNVSLTCPSKVWLEKCLEEMETIK 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 ++++TG  R+G S +E L       + +      I SH + AD   ++ +  Q 
Sbjct: 121 GKLKIHVKIETGMGRIGTSDKEELVKIDKLLSSEKIDFEGIFSHYSNADGSDNNYDDYQT 180

Query: 180 ERFRTLISHYKGIEASLA----SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHP 231
           + F   +  +      +     +S+         + +TR GISLYG     N        
Sbjct: 181 KNFDERLKLFTHKPKYIHIGNSASTVKYSDRQDQYNMTRLGISLYGCYPSENIEKLDKIK 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ VV+  ++I  ++K L GE + YG   +  +D  IA   IGYADG      G   +  
Sbjct: 241 LEPVVSLVSKITHVKKFLKGEKLGYGVSYEAKQDEYIATVPIGYADGILRRAQGFKIKVG 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                            I+G++ MD  M   ++  +I+VGD + IFG +    I +DD A
Sbjct: 301 TED------------CEIVGRVCMDQLMVRCSE--NIKVGDDVLIFGENNGQKISVDDFA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   I  R  + Y
Sbjct: 347 TFQDTISYEIFCCINKRVPRVY 368


>gi|319399562|gb|EFV87817.1| alanine racemase [Staphylococcus epidermidis FRI909]
          Length = 382

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 158/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 2   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 62  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P S +N 
Sbjct: 122 NQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRNHLVFEGVYTHFASADEPGSSMN- 180

Query: 177 VQLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++   K I     +S+G LL         R GISLYG         N    
Sbjct: 181 EQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++   AGE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 241 LRPSAQLVSETVQVKTLKAGETVSYGRTYTAAEEMTIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 294 -----GAFVNVNGNQCEVIGRICMDQMIVKVP--SHVKTGEKVILMDNHVDSPQSAEAVA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 347 NKQGTINYEVLCNLSRRLPRIY 368


>gi|229551601|ref|ZP_04440326.1| alanine racemase [Lactobacillus rhamnosus LMS2-1]
 gi|258540732|ref|YP_003175231.1| alanine racemase [Lactobacillus rhamnosus Lc 705]
 gi|229315066|gb|EEN81039.1| alanine racemase [Lactobacillus rhamnosus LMS2-1]
 gi|257152408|emb|CAR91380.1| Alanine racemase [Lactobacillus rhamnosus Lc 705]
          Length = 379

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 152/379 (40%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNVQHEVARLKKQTQLFAVVKADAYGHGMLRVAHVAKAAGASGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SSV  L     ++      P
Sbjct: 67  LLDEALDLRAANYTEPVLVLGIVPSQYAAIAAAQMVSLPLSSVDWLKQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                + +DTG  R+G +  +           + K   +  I +H A ADDP       Q
Sbjct: 127 PLRLHIALDTGMGRIGFTDDQTLLDAVAFIQAHPKAFTIEGIFTHFATADDPDDAYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPM 232
           + +F  +++        +   +S+  L     +  + R G+++YG             P+
Sbjct: 187 VAKFNHMVALLPHRPRYVHVSNSATSLWHAACNGNMVRYGVAIYGLNPSGDVIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   + T D  I    +GYADG+   L G       
Sbjct: 247 EPALSLESELTFCKQVHAGDGISYGVTYRATGDEFIGTVPVGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G+   I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGHPCEIVGRICMDQFMIRLPKAYPA--GTKVVLIGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   + +R  +
Sbjct: 353 YSHTIHYEIACNLTSRLKR 371


>gi|325103723|ref|YP_004273377.1| alanine racemase [Pedobacter saltans DSM 12145]
 gi|324972571|gb|ADY51555.1| alanine racemase [Pedobacter saltans DSM 12145]
          Length = 818

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 95/369 (25%), Positives = 153/369 (41%), Gaps = 19/369 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L A+++N +     L    +   +VK   YG G  +IA  L    V    V   +E
Sbjct: 458 LEINLNAMEHNLNYYRSKLKPGVKLMTMVKAFGYGSGSFEIANLLQFNHVDYLSVAYADE 517

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYAL 126
           GV LR       I V+       E I+       + S      F + L + G+ ++P  L
Sbjct: 518 GVTLRQNGITLPIMVMSPEISSLEAIVKHQLEPEIFSQSTLEAFSNYLQNAGISNYPIHL 577

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ----LERF 182
           ++DTG +RLG    E          K   ++  + SHL  ++ P     + Q    ++ F
Sbjct: 578 KLDTGMHRLGFMPDELDFIADFIKTKNTVKIQSVFSHLVASESPIHDDFTRQQISIIKDF 637

Query: 183 RTLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
              +    G      + ++S I   P   F + R GI LYG  +       ++ V   + 
Sbjct: 638 TNKLEQRIGYTFIKHICNTSAITRWPEAQFDMVRLGIGLYGVDNFSEDDENLEQVAVLKT 697

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  I++   GE + YG +  +  D  IA   IGYADG+   L              G  
Sbjct: 698 TVSQIKQIKRGETIGYGRRGVMPEDGQIATVKIGYADGFLRALGNGV----------GSM 747

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           FI G  V  +G I MDM M +IT   +++ GD + +F    +L  +A    T  Y++L  
Sbjct: 748 FINGEEVFTIGNICMDMCMLNITG-KNVKEGDEVIVFNSQKRLYKLAEKLNTIPYEILTS 806

Query: 361 IGTRYAKFY 369
           +  R  + Y
Sbjct: 807 VSQRVKRVY 815


>gi|87300882|ref|ZP_01083724.1| alanine racemase [Synechococcus sp. WH 5701]
 gi|87284753|gb|EAQ76705.1| alanine racemase [Synechococcus sp. WH 5701]
          Length = 403

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 114/384 (29%), Positives = 185/384 (48%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H  +   +++D TA+++N  ++   L+ ++   AVVK + YG G   +A A    G   
Sbjct: 21  LHPRQRAWVEVDETAIEHNARALGRWLAPDSSLMAVVKADGYGHGAAPVARAAMAGGATS 80

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
             V +++EG++LR    +A + V+   IHP + +   + +L+P IS + +      L S 
Sbjct: 81  LGVATLQEGIELRQAGLEAPVLVMGNLIHPEELRSCLEWDLMPTISGMREALLCQNLASG 140

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHV 174
            G S    L++DTG  RLG+   + +             L+ + SHLA AD P      +
Sbjct: 141 SGRSMALHLKLDTGMARLGVDWGDGVRLLQALLGLDAVLLAGVYSHLADADAPDPGGGGL 200

Query: 175 NSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
            ++Q +RF +++     +        LA+S+G L     H+ L R G++LYG     + S
Sbjct: 201 TALQQQRFESVLRGAGELGLATGVRHLANSAGTLRCRRLHYDLVRVGLALYGQAPAEHLS 260

Query: 230 H--PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           H  P+Q  ++  AR+ LIR+  AG  VSYG +    R S +AV  IGYADG P  LS   
Sbjct: 261 HTVPLQPAMSVRARVCLIREVPAGVGVSYGHRYTTRRPSRLAVVTIGYADGVPRLLSNQL 320

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      +    G  +  +G ITMD  + D T++  +EVG  + + G D    I  
Sbjct: 321 -----------EVLFAGRRLAQVGAITMDQLLIDATEAPQLEVGSVVTLLGDDGGERITP 369

Query: 344 DDVALASGTTNYDLLVRIGTRYAK 367
            D A ASGT  +++L     R  +
Sbjct: 370 QDWAQASGTIPWEILCGFKHRLPR 393


>gi|291279508|ref|YP_003496343.1| alanine racemase [Deferribacter desulfuricans SSM1]
 gi|290754210|dbj|BAI80587.1| alanine racemase [Deferribacter desulfuricans SSM1]
          Length = 363

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 161/368 (43%), Gaps = 19/368 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVT 63
                +I+L   K+N     +LS  ++  A+VK +AYG G  K++   Y    V+DF V 
Sbjct: 9   RPTYAEINLANYKHNIEVAKSLS-KSKIIAIVKADAYGHGAIKLSKFAYEQCDVKDFGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMS-CGVS 121
           ++EEGV LR   P     +  G       + +    + P +     +    K      V 
Sbjct: 68  TIEEGVNLRNVLPTDARIITLGYIDEHHFEELLHHKITPTVFDKSIMAKLDKFAKGNNVV 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG NRLG  L    DF     +     + L+++HL+ +D         Q+ R
Sbjct: 128 LDVVLKIDTGMNRLGFGLN--TDFNELVESYSNLNIVLMMTHLSSSDTDLD-YTKWQINR 184

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F   +  Y     +   +S  +   +  +  TRPGI  YG     N+   ++ V++  ++
Sbjct: 185 FDEYLKRYNVKAETSVFNSSAICFYSNKYTYTRPGIMSYGYVYPENR-FGLKPVMSIYSK 243

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I I++   GE +SY      ++D  I V  IGYADGY   LS             G  F
Sbjct: 244 LIHIKRLKKGEKISYNQTFTASKDMKIGVIPIGYADGYFRALSN-----------KGVMF 292

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    ++G + MDMTM DIT     ++   +++ G  I  + +A    T +Y+++  I
Sbjct: 293 VNGKPCNVVGTVCMDMTMIDITHLNESDLDCEVEVLGKHIDAEQIAKMCNTISYEIVCAI 352

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 353 SDRIPRVY 360


>gi|297587277|ref|ZP_06945922.1| alanine racemase [Finegoldia magna ATCC 53516]
 gi|297575258|gb|EFH93977.1| alanine racemase [Finegoldia magna ATCC 53516]
          Length = 391

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 155/379 (40%), Gaps = 28/379 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LK+DL  LK+N+  +  +S   +  AVVK NAYG G   I   L   G+  F V+++ E 
Sbjct: 8   LKVDLDKLKHNYKEIKNISNLVKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQ 127
           ++LR       I +L  I     ++    N+   +         + +           ++
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYETAVEINNVAKSLNKICKVHIK 127

Query: 128 VDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           +DTG  RLG  +     + L+     +      L  I SH + AD         Q   + 
Sbjct: 128 IDTGMTRLGFQVRLDKDKCLEEIFKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYNTYI 187

Query: 184 TLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTV 235
             +   +     +     ++    +   Y   + R GI LYG         N    ++ +
Sbjct: 188 GFMIDVENRGITVPIKHIANDAGAIIHGYFLDMIRCGIGLYGYHASDYVRENSRLNLEEI 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    + +I+    G  + YG       ++++A A IGYADGYPL LS           
Sbjct: 248 SSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I G    ILGK+ MD  M D+T    ++VGD I +FG D    I L D+A  + 
Sbjct: 298 -KAYVIINGKKAKILGKVCMDQIMIDVTYIRDVKVGDKILLFGKDDMGEISLYDLAEMAN 356

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T  Y+LL R+  R  + YT
Sbjct: 357 TNVYELLCRVTMRIPRIYT 375


>gi|163814916|ref|ZP_02206304.1| hypothetical protein COPEUT_01067 [Coprococcus eutactus ATCC 27759]
 gi|158449855|gb|EDP26850.1| hypothetical protein COPEUT_01067 [Coprococcus eutactus ATCC 27759]
          Length = 377

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 95/383 (24%), Positives = 161/383 (42%), Gaps = 25/383 (6%)

Query: 1   MHSNEFL-R--LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M++  F  R    IDL  L++N  ++   L       AV+K + Y  G   + P L   G
Sbjct: 1   MNNRPFAGRTAAVIDLAKLRSNIANIKSRLKPGVEFIAVMKGDGYRHGIAGLYPTLKECG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKL 115
           +  + V   EEG  LR       I +L              +L   + S+       +  
Sbjct: 61  IDSYAVAIWEEGKMLRDAGATESILILGDTADDMLDEAAKYDLDLTVFSMEGAENMAAAA 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
              G      ++++TG NR+G    QE+ D        +   ++ I +H A AD+     
Sbjct: 121 RRAGKKQNVQIKLNTGMNRIGFPVCQESFDTIKKICEMEDLNVTGIFTHFARADEGDHTS 180

Query: 175 NSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-- 227
              QL+ +   ++  + +     +  +A+S  IL+ P       R G  LYG T   +  
Sbjct: 181 ARKQLDLYLHAVNELEKMGVVIPKHHVANSPAILMLPEAQLDAVRCGDILYGLTPSDDFD 240

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
            K+  +Q +++    + ++++  AG  V YGG     R + IA   +G+ADGY   LS  
Sbjct: 241 WKNSGLQEILSWYTYVAMVKEVPAGSEVGYGGTFVTERPTKIATLPVGFADGYSRYLSN- 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                      GK  I G+  PI+G++ MD  M DITD   ++ GD + + G  + ++D+
Sbjct: 300 ----------KGKVIINGHEAPIIGRVCMDQCMADITDIPDVQRGDTVTLLGEGMSIEDM 349

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T    ++  I  R  + Y
Sbjct: 350 ANMLDTNVDVIVCNISVRVPRVY 372


>gi|326793406|ref|YP_004311226.1| alanine racemase [Marinomonas mediterranea MMB-1]
 gi|326544170|gb|ADZ89390.1| Alanine racemase [Marinomonas mediterranea MMB-1]
          Length = 377

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 151/369 (40%), Gaps = 22/369 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +++DL  + +N   +   SG     AVVK NAYG G  ++A A  +AG     V  ++
Sbjct: 6   TWVEVDLDRIAHNVSHIKEHSGYEHLFAVVKANAYGHGDVEVARAALDAGATHLAVAFLD 65

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LRL      I V+  +      +  +  +   +  +  +   +     G +    L
Sbjct: 66  EALSLRLAIKDVPILVMGPVRVEDISLAAEHKIHITVHDMDWIMQAAHYR--GPTVNVHL 123

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++D+G +R+GL+    L   +++  +      + +       D      S QL+    + 
Sbjct: 124 KMDSGMHRIGLTSAATLALANSTLREHKHINLVGLFTHFATADSCKDYYSQQLKNVAEMT 183

Query: 187 S--HYKGIEASLASSSGILLG--PNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTAEA 240
           +       E    S+S  LL   P  +    R GI++YG       S P+  +   +  +
Sbjct: 184 AGLDLNTFEYVHQSNSAALLYQTPQPNANCARLGIAMYGLAPNNEMSSPVSLKQAFSLHS 243

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI  ++  LAG+ V YG   +      IAV  IGYADG+                     
Sbjct: 244 RITQVKSILAGDKVGYGATFEANAPMKIAVIPIGYADGWLRYHQNRS------------V 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            IKG + PI+G+I MD +M  I    +I  GD + +      +D  A    T NY+++  
Sbjct: 292 SIKGKLYPIVGRICMDQSMILI--DETITTGDQVDLINDQCTVDMAAKDLQTINYEIVCS 349

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 350 ISDRVPRRY 358


>gi|282852968|ref|ZP_06262305.1| alanine racemase [Propionibacterium acnes J139]
 gi|282582421|gb|EFB87801.1| alanine racemase [Propionibacterium acnes J139]
          Length = 375

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     GV+    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGVTAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLCPERLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLVETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGY 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQGDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVNR 370


>gi|325267108|ref|ZP_08133777.1| alanine racemase [Kingella denitrificans ATCC 33394]
 gi|324981461|gb|EGC17104.1| alanine racemase [Kingella denitrificans ATCC 33394]
          Length = 356

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 87/369 (23%), Positives = 154/369 (41%), Gaps = 20/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L++N+  +  + G     AVVK +AYG G  + A AL +     F V  
Sbjct: 2   RPLVAEIRLAHLRHNYRVLKEMHGQ-NLLAVVKADAYGHGAVQCAKALDDM-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE V LR    ++ I +L G+    E  + +   +  +                     
Sbjct: 60  LEEAVTLRENGIKSPILLLEGVFEPHEYALVEQYGLWTVIHQQTQLEDCLAHDWKQPATV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G          H           + ++H ACADD    +  +Q++ F T
Sbjct: 120 WLKMDSGMHRAGFFPHNYAAAYHALQQSPKIGKIVKMTHFACADDAERGMTEMQIDTFDT 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----QTVVTAEA 240
                 G ++SLA+S+ IL  P    +  R G++LYG +     +       + V+   +
Sbjct: 180 ACEGLGG-DSSLANSAAILAYPEARREWGRAGLALYGVSPFAAGAGCFEADLKPVMRVAS 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++   R     E + YG      R + + + A GYADGYP                    
Sbjct: 239 QVFAERVLQPHEPIGYGASFYTKRSTRVGLVACGYADGYPRNA-----------PTDTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           FI G    ++G+ +MDM   D++   +      +++FG  + ++++A ++G   Y++L  
Sbjct: 288 FINGMRSRLIGRASMDMLTVDLSHVPADSAY-EVELFGDSVSINELAQSAGHIPYEILCH 346

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 347 I-KRMRRVY 354


>gi|329735688|gb|EGG71971.1| alanine racemase [Staphylococcus epidermidis VCU028]
          Length = 382

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 157/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 2   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 62  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 121

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P + +N 
Sbjct: 122 NQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGNSMN- 180

Query: 177 VQLERFRTLISHYKGIEASLA-SSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++  +        +S+G LL         R GISLYG         N    
Sbjct: 181 EQYTLFKEMVNQVEKPNYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++   AGE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 241 LRPSAQLVSETVQVKTLKAGETVSYGRTYIADEEMTIAILPIGYADGYLRSMQ------- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 294 -----GAFVNVNGSQCEVIGRICMDQLIVKVP--SHVKTGEKVILMDNHVDSPQSAEAVA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 347 NKQGTINYEVLCNLSRRLPRIY 368


>gi|148244756|ref|YP_001219450.1| alanine racemase [Candidatus Vesicomyosocius okutanii HA]
 gi|226711067|sp|A5CWE3|ALR_VESOH RecName: Full=Alanine racemase
 gi|146326583|dbj|BAF61726.1| alanine racemase [Candidatus Vesicomyosocius okutanii HA]
          Length = 351

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 100/358 (27%), Positives = 167/358 (46%), Gaps = 20/358 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + I  +ALK+N   +   S N++  ++VK NAYG     I P + ++      V+ + E 
Sbjct: 7   VSISQSALKHNLLVVKENSPNSKIVSMVKANAYGHKINLINPIINHS--DLLAVSEISEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KLR  T +  + +   I   + +     N   V+    Q+T  +   +        +++
Sbjct: 65  KKLRKITKKPILLLSGVIEDQELQQAIKLNCQIVVHDKTQITTIN---NTKQPINIWIKI 121

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG +RLGLS  E  D      N  L     ++SH ACAD+ +  +N  QL  F+    H
Sbjct: 122 NTGMHRLGLSTHEYFDCIKLLANNPLINTQCVMSHFACADEINHPMNQSQLFEFKKSTYH 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
               + S+A+S+ IL  P  HF   RPGI LYG +     ++ ++ V+   A I+ I+  
Sbjct: 182 TT--KRSMANSAAILSNPASHFDYVRPGIMLYGVSPFEIINNHLKPVMQISAPIMSIKTI 239

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G+ V YG      + + IA   IGY DGYP                G    I   + P
Sbjct: 240 QTGDSVGYGATWIAKKSTTIATIGIGYGDGYPRHAKN-----------GTPVLINNNLCP 288

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRY 365
           ++G+++MD+   DI++     VGD + ++G   ++++ +A  S T  Y+LL  I +R 
Sbjct: 289 LIGRVSMDLICVDISNV-KASVGDNVILWGAQKLRIETIAKYSDTIAYELLTGISSRV 345


>gi|330895721|gb|EGH28011.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 330

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 147/338 (43%), Gaps = 17/338 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLARENSGG-KALAVVKADAYGHGAVRVAQAL-EAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A + +L G     E  +   + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELALIVEHDLGTVVHATWQLEAIEQARLGKPITV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH + AD+ +S  +  QL  F T
Sbjct: 120 WLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARVVLMSHFSRADELNSGCSDEQLAVFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                   E SL +   +L  P      +RPGI LYG T           +Q V+T E++
Sbjct: 180 F-RKGLAAETSLKNPPAVLGWPQIPSDWSRPGIMLYGATPFDQAHPLADRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II +R+   GE V YG      R S I V A+GYADGYP                G    
Sbjct: 239 IISVRELPVGEPVGYGATFVCDRPSRIGVVAMGYADGYPRHA-----------PTGTPVQ 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP 339
           I G    +LG+++MDM   D+TD     +G  +++ G 
Sbjct: 288 IDGQPSRLLGRVSMDMLCVDLTDVPQAGLGSRVELVGQ 325


>gi|297625319|ref|YP_003687082.1| alanine racemase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921084|emb|CBL55625.1| Alanine racemase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 382

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 148/381 (38%), Gaps = 31/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFVTSVEE 67
           L+IDL AL++N  ++  L G+ +    VK + YG G   IA             V +V E
Sbjct: 7   LEIDLDALRHNARAIKQLVGDRKVLVAVKADGYGHGAVPIARLFQREHLADWLGVATVSE 66

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
            + LR       I  L    P +     D ++   +                G      L
Sbjct: 67  AMALREGGVTLPILKLSHAFPEELPTAIDADIALTVVDEQSADEAAEAAKVVGKPVNVHL 126

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            +DTG  R+G   + A+    +     L    +                  +L RF   +
Sbjct: 127 ALDTGMRRIGAEPEHAVALARHIDEDALNLQGIFTHMPVSDTTQGYDFTVEELARFAKAV 186

Query: 187 SHYK---------GIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDK--INKSHPMQT 234
              +          +    A++S  +LG +     + RPGI++YG        ++  ++ 
Sbjct: 187 DDVQADRATRGLPAVPLVHAAASAGVLGHDLSGLTMVRPGIAIYGAYPDAQTPRTAALRP 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           VVT  +++  I++  AGE VSYG       D  IA   +GYADG+    S          
Sbjct: 247 VVTMRSKVSFIKRIRAGETVSYGRTWTAPTDRWIATVPVGYADGFNRLNSNR-------- 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT--DSLSIEVGDYIQIFGPD----IKLDDVAL 348
              G+  I G   P+ G++ MD TM D+   D   +  GD + I G      I  D++A 
Sbjct: 299 ---GRMLINGRSFPVAGRVCMDQTMLDLGEADDHGVHRGDDVIIIGASGDEYISTDELAE 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +GT +Y++   I  R ++ Y
Sbjct: 356 LAGTISYEVTAVIPPRVSRQY 376


>gi|83945273|ref|ZP_00957622.1| alanine racemase [Oceanicaulis alexandrii HTCC2633]
 gi|83851443|gb|EAP89299.1| alanine racemase [Oceanicaulis alexandrii HTCC2633]
          Length = 363

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 131/369 (35%), Positives = 183/369 (49%), Gaps = 23/369 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N   RL IDL A+  N+ ++ AL+  A T+AVVK NAYGLG   +A  L   G + FFV 
Sbjct: 11  NTRSRLVIDLDAIARNYAALQALTPKAETSAVVKANAYGLGAGPVARRLAKQGARTFFVA 70

Query: 64  SVEEGVKLRLYT--PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           +VEEG  +R     P   I+V  G       +     L  +++   +   +        +
Sbjct: 71  TVEEGAAVREALGDPLPDIWVFAGYRAKDRPLYVKHRLGAILNQPGETAQFR----AAPT 126

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P A+ +DTG  RLG    +     +   N  +   S+I+SHLAC++D +S  N  QLER
Sbjct: 127 GPCAIHIDTGMARLGYGAGDISGLLNALQNLDV---SMIMSHLACSEDAASTQNLRQLER 183

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F  L +       SLA++ G+LLG +Y F +TRPGI LYG T  ++   P + VV  EA 
Sbjct: 184 FTALTNALPETRLSLANTGGVLLGESYQFDVTRPGIGLYGATADLDADTPFEPVVKLEAP 243

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ +R+  AG+ V YG         L+A    GYADG P  LSG            G   
Sbjct: 244 ILQLREIDAGDTVGYGATYVAHSPRLVATVGAGYADGLPRALSG-----------AGCAR 292

Query: 302 IKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           I G   PILG+I+MD+T  D+T     I  G   + FGPD+     A   GT  Y++L  
Sbjct: 293 IAGLRAPILGRISMDLTTIDVTGLEHEIAQGAVPEFFGPDL--YQAAALDGTLPYEILTG 350

Query: 361 IGTRYAKFY 369
           +G R  + Y
Sbjct: 351 LGARAERIY 359


>gi|332639567|pdb|3MUB|A Chain A, The Crystal Structure Of Alanine Racemase From
           Streptococcus Pneumoniae
 gi|332639568|pdb|3MUB|B Chain B, The Crystal Structure Of Alanine Racemase From
           Streptococcus Pneumoniae
          Length = 367

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/376 (21%), Positives = 152/376 (40%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N   M A         AVV  NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALIHLGAIRQNIQQMGAHIPQGTLKLAVVXANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I +L         +  + +    ++ +  +             
Sbjct: 65  SNIDEAIELRQAGLSKPILILGVSEIEAVALAKEYDFTLTVAGLEWIQALLDKEVDLTGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L +D+G  R+G      ++   +   +    +  I +H A AD+ S    + QLERF
Sbjct: 125 TVHLXIDSGMGRIGFREASEVEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           +T+++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KTILASMKEVPELVHASNSATTLWHVETIFNAVRMGDAMYGLNPSGAVLDLPYDLIPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++   AG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVPAGACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA    T 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|199598806|ref|ZP_03212218.1| Alanine racemase [Lactobacillus rhamnosus HN001]
 gi|258509531|ref|YP_003172282.1| alanine racemase [Lactobacillus rhamnosus GG]
 gi|199590311|gb|EDY98405.1| Alanine racemase [Lactobacillus rhamnosus HN001]
 gi|257149458|emb|CAR88431.1| Alanine racemase [Lactobacillus rhamnosus GG]
 gi|259650798|dbj|BAI42960.1| alanine racemase [Lactobacillus rhamnosus GG]
          Length = 379

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 86/379 (22%), Positives = 153/379 (40%), Gaps = 30/379 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               + ID TA+ +N    +  L    +  AVVK +AYG G  ++A     AG   F V 
Sbjct: 7   RPATVLIDETAILHNVQHEVARLKKQTQLFAVVKADAYGHGMLRVAHVAKAAGASGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E + LR       + VL  +      I     +   +SSV  L     ++      P
Sbjct: 67  LLDEALDLRAANYTEPVLVLGIVPSQYAAIAAAQTVSLPLSSVDWLKQALPVLEAQPELP 126

Query: 124 Y---ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                + +DTG  R+G +  +           + K   +  I +H A ADDP       Q
Sbjct: 127 PLRLHIALDTGMGRIGFTDDQTLLDAVAFIQAHPKAFTIEGIFTHFATADDPDDAYFKQQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPM 232
           + +F  +++        +   +S+  L     +  + R G+++YG             P+
Sbjct: 187 VAKFNHMVALLPHRPRYVHVSNSATSLWHAACNGNMVRYGVAIYGLNPSGDVIPTTPFPL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +   ++  AG+ +SYG   + T D  I    +GYADG+   L G       
Sbjct: 247 EPALSLESELTFCKQVHAGDGISYGVTYRATGDEFIGTVPVGYADGWLRRLQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G++  I+G+I MD  M  +  +     G  + + G     +I L DVA 
Sbjct: 301 ------HVLVDGHLCEIVGRICMDQFMIRLPKAYPA--GTKVVLIGQSGDQEITLLDVAK 352

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T +Y++   + +R  +
Sbjct: 353 YSHTIHYEIACNLTSRLKR 371


>gi|170016583|ref|YP_001727502.1| alanine racemase [Leuconostoc citreum KM20]
 gi|169803440|gb|ACA82058.1| Alanine racemase [Leuconostoc citreum KM20]
          Length = 376

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 103/378 (27%), Positives = 166/378 (43%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++IDL A++ N  S+ A +G  R  AVVK + YG G   +A ALY  GV+DF V +
Sbjct: 11  RPSWIEIDLGAIQENAQSIMAHAGAKRLIAVVKADGYGHGATPVANALYEIGVRDFAVAT 70

Query: 65  VEEGVKLRL--YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + EG+KLR        RI +L         ++    L P I S+  L+   + +  G + 
Sbjct: 71  IGEGIKLRQELAYQDYRIVLLGVQDIAHVDVMVKYRLSPAIESIDWLSVALQAIPEGATL 130

Query: 123 PYALQVDTGFNRLGLSLQEALD-FTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R+G   +EA+        N    +L  + +H A ADD +      Q +R
Sbjct: 131 DVELAVDTGMGRMGAHSKEAVYSVYRYIKNNDKLELGGVFTHFATADDSNIGYYKQQAQR 190

Query: 182 FRTLI--SHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKIN---KSHPMQTV 235
           F   +  +        LA+S   L        +  R G  LYG            P++ V
Sbjct: 191 FNDWVTAAGIPRQYWHLANSGSALWHTQEIDTRTIRVGSVLYGYNPGAPLLTLPIPLKHV 250

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
              ++RI  + + + GE VSYG      +   +A   IGYADGY   ++G+         
Sbjct: 251 FALKSRIGAVHQLITGESVSYGATYTAQKPQWVATLPIGYADGYLRRMAGM--------- 301

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  I G +  ++G+ITMD  +  +  +    +G  + + G D    I +++ A  + 
Sbjct: 302 ---RVLINGKVTYVIGRITMDQIVIALDQAYP--IGTEVTLIGRDGDNEITVEEFADYAN 356

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L   G R  + Y
Sbjct: 357 TIPHEILTSFGPRLPRIY 374


>gi|296168767|ref|ZP_06850456.1| D-alanine racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295896550|gb|EFG76194.1| D-alanine racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 394

 Score =  255 bits (652), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 96/379 (25%), Positives = 161/379 (42%), Gaps = 26/379 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
                +DL A+++N   +   +G A+  AVVK + YG G  + A A    G  +  V +V
Sbjct: 19  LAEALVDLGAIEHNVRLLREHAGAAQVMAVVKADGYGHGATQAARAALAGGAAELGVATV 78

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E + LR     A +           +     ++   +SS  Q           G +   
Sbjct: 79  AEALALRAEGITAPVLAWLHPPGIDFRPALLADVEIAVSSERQLDELLDAARRTGRAATV 138

Query: 125 ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            ++VDTG NR G+              +  +   +L  ++SH+  AD P + VN +Q +R
Sbjct: 139 TVKVDTGLNRNGVHPARYPSMLTALRRAVAENAIRLRGLMSHMVFADQPDNPVNDLQAKR 198

Query: 182 FRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTV 235
           F  +++       +   A LA+SS  +  P+  F L RPG+++YG +         +   
Sbjct: 199 FADMLAQAGESGVRFEVAHLANSSATMSRPDLAFDLVRPGVAVYGLSPVPELGGMGLVPA 258

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T +  + L++   AGE VSYG      RD+ +A+  +GYADG   +L G          
Sbjct: 259 MTVKCPVALVKSIRAGESVSYGHTWTAERDTTLALLPVGYADGVFRSLGGRL-------- 310

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DIKLDDVALAS 350
              +  I G   P +G+I MD  + D+      +  GD   +FGP    +    D A   
Sbjct: 311 ---EVLINGKRRPGVGRICMDQFVVDLGPGRTDVAEGDEAILFGPGGSGEPTAQDWADVL 367

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT +Y+++     R  + Y
Sbjct: 368 GTIHYEVVTSPRGRITRTY 386


>gi|86608143|ref|YP_476905.1| alanine racemase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556685|gb|ABD01642.1| alanine racemase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 424

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 111/378 (29%), Positives = 172/378 (45%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++ID   L+ N   +   L  N    AVVK NAYG G + +AP    AG +   V 
Sbjct: 50  SRAWVEIDAAQLRENLRLLQRRLGSNVEIWAVVKANAYGHGAQLVAPVAVAAGAKGLCVA 109

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKI--IFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           ++ EG++LR    QA + VL  ++   E    +     + +  +             G  
Sbjct: 110 TLAEGIELRQTGLQAPVLVLGALNTWAELQQAMAARLEVSLTCTDQIPLMRQVARWAGRP 169

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P  + VDTG  RLG+  +EA             +   + SHLA AD+P S V   Q  R
Sbjct: 170 IPVHVNVDTGMTRLGIPWKEAAAVWGQICRIPELEGCSLFSHLATADEPHSPVMEQQHAR 229

Query: 182 FRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-QTV 235
           F  ++   +          L +S+G L     H+   R G+ LYG +   +   P  Q +
Sbjct: 230 FAQVVEQIRQAGDPLPALHLDNSAGALTH--LHYSRVRLGLVLYGLSPAPHLPVPGLQPI 287

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +AR+  I+   A   VSYG +   +R S IA  AIGYADG P  LSG          
Sbjct: 288 LRLKARLSHIQTVPAQTGVSYGHRYITSRPSRIATLAIGYADGIPRRLSGWL-------- 339

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALAS 350
              +G+++G ++  +G ITMD  M+D+T+   I+VGD +++ GP+     + + D A   
Sbjct: 340 ---RGWVRGGLIQQVGTITMDQCMWDVTERPDIQVGDVVELLGPNLANAGLSVQDWADQL 396

Query: 351 GTTNYDLLVRIGTRYAKF 368
           GT +Y+LL  +  R  + 
Sbjct: 397 GTISYELLCGLSARLPRV 414


>gi|163739575|ref|ZP_02146984.1| alanine racemase [Phaeobacter gallaeciensis BS107]
 gi|161387034|gb|EDQ11394.1| alanine racemase [Phaeobacter gallaeciensis BS107]
          Length = 345

 Score =  255 bits (651), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 130/365 (35%), Positives = 191/365 (52%), Gaps = 25/365 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL ++L AL  NW +++AL+ N  TAAVVK N YGL   ++  AL NAG ++FFV   E
Sbjct: 4   ARLTLNLDALVTNWRNLDALT-NCETAAVVKANGYGLDAGRVGRALANAGARNFFVAMAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G   G  K++ D  L P+++S+ Q+  + + +     HP+ 
Sbjct: 63  EGVALRRAIGPGPGISVFAGHMEGDAKLLRDFQLTPMLNSLDQMLRHFESL---PGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+DTG NRLG+   E       + ++      L++SHLACAD+ +  +NS QL+ F   
Sbjct: 120 VQLDTGMNRLGMEAAEWAAVRDIALSQ---GPVLLMSHLACADETTHPMNSHQLQNFLD- 175

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
           ++    +  SLA++ G+LLG NYHF L RPGI LYGG    +       V   +  +I I
Sbjct: 176 LTEGLDLPRSLAATGGLLLGRNYHFDLCRPGIGLYGGQPYGDA----LPVAQLDLPVIQI 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG      R S IA  A GYADG    L               + +    
Sbjct: 232 RSLDPGETVGYGNSWAAQRPSRIATVAAGYADGLHRALGSGQI----------QVYAGDT 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+++MD+   D+TD        ++ I      +D +A A+GT  Y++L  +G+RY
Sbjct: 282 PCPVVGRVSMDLITVDVTDLGDDP--SHLAILNERQTVDTLADAAGTIGYEILTSLGSRY 339

Query: 366 AKFYT 370
           A+ YT
Sbjct: 340 ARSYT 344


>gi|238754895|ref|ZP_04616245.1| Alanine racemase, catabolic [Yersinia ruckeri ATCC 29473]
 gi|238706906|gb|EEP99273.1| Alanine racemase, catabolic [Yersinia ruckeri ATCC 29473]
          Length = 357

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 153/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L+A  +N + +  L+ +A+  +VVK NAYG G  +I  +L  A    F +  
Sbjct: 3   RPISATLHLSAFTHNLNLVRGLAPDAKVWSVVKANAYGHGLARIWRSL--ATTDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR    Q  I +L G    Q+ ++ D   +  +          +          
Sbjct: 61  LNEAVLLREQGWQGPILLLEGFFQPQDLVLLDHYRLTTVVHSDWQLEAIQRARLTAPLNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG  + +       + +        ++SH A AD   +     Q      
Sbjct: 121 YLKINSGMNRLGFPVGQTHAVWLWAKSLANIGQITLMSHFANAD---NPTGVTQQFDHIV 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             S       S A+S+  L     H    RPGI LYG +            +Q  ++  +
Sbjct: 178 HASAKIAAPRSFANSAATLWHSRTHADWIRPGIILYGASPSGKVADIADSGLQPTMSLHS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I+ I+    G  V YG +   +    I + A GYADGYP                G   
Sbjct: 238 KILAIQDLSKGHSVGYGSRYLASDAQRIGIVACGYADGYPRHA-----------PTGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G +   LG I+MDM M D+T      +G  ++++G ++ +D+VA  +GT  Y+L+  
Sbjct: 287 WVDGVLTRTLGTISMDMLMLDLTSCPQAMIGSQVELWGKNLPIDEVAATAGTVGYELMCA 346

Query: 361 IGTRYA 366
           + +R  
Sbjct: 347 LASRVP 352


>gi|123966942|ref|YP_001012023.1| alanine racemase [Prochlorococcus marinus str. MIT 9515]
 gi|123201308|gb|ABM72916.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9515]
          Length = 399

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 108/383 (28%), Positives = 179/383 (46%), Gaps = 31/383 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   A++ N   +   L  N    AVVK + YG   + ++      G     V 
Sbjct: 26  QRAWIEVSRKAIEANVRKLRSKLKNNCEFMAVVKADGYGHDAKVVSENAIRGGASQLGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EG+KLR  +    I VL  ++      I F  +L+P +SS+ +    +++     + 
Sbjct: 86  TLKEGIKLRSSSINVPILVLGNLYAKKDLLICFRNDLMPTVSSIRECLICNEIGKINNMK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L++DTG +RLG    E +   +N  + K   +  I SHLACAD+           +
Sbjct: 146 FSLHLKIDTGMSRLGFECDEFVQQFNNIKSLKNIDVKGIYSHLACADEKNALNPKSRTQL 205

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSH 230
           Q E+F+       I + K I+  LA+S+G++LG N+HF + R G+++YG    IN  +  
Sbjct: 206 QREKFQELLKLVSIDNTKNIKIHLANSAGMILGKNFHFDMVRVGLAMYGYDPLINTTEKS 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  +A++  +R    G  VSYG +    R + +AV +IGYADG   +LSG  S  
Sbjct: 266 LLKPALFLKAKVTFVRTIEKGVGVSYGNKFVSDRKTKLAVLSIGYADGIIRSLSGKIS-- 323

Query: 291 SPSVFLGGKGFIKGYM-VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                      I      P +G ITMD  M DITDS  I+VG  + + G D    I   D
Sbjct: 324 ----------LIHNKKLYPQVGSITMDQMMVDITDSEDIKVGSTMLLLGSDGEQTISPID 373

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
            A    +  +++L     R  + 
Sbjct: 374 WAHKCDSIPWEILCSFKNRLPRV 396


>gi|326333138|ref|ZP_08199387.1| alanine racemase [Nocardioidaceae bacterium Broad-1]
 gi|325949121|gb|EGD41212.1| alanine racemase [Nocardioidaceae bacterium Broad-1]
          Length = 394

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 82/384 (21%), Positives = 151/384 (39%), Gaps = 32/384 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + IDL A+++N   +           VVK + YG G  +   A    G     V S
Sbjct: 12  RRAEIVIDLAAIRHNVSRLKEHL-RTPIMMVVKADGYGHGLVQAGRAAREGGADWLGVAS 70

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
            +E + LR    + R+     +     + +   ++     +V  L  ++      G +  
Sbjct: 71  ADEALALRAAGDEGRLLAWLIMPSEPAEDLVAADIDVTAYTVADLEKFAAAGDALGRTPR 130

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLE 180
             L+VDTG +R G +  +  +    +   +         I SH + +++ +   +++Q +
Sbjct: 131 VQLKVDTGLSRGGAAFADWGNLVARARILEAEGAIRVTGIWSHFSASENTADPASALQEK 190

Query: 181 RFRT--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F     ++   G+      LA+S+G LL P+    L R GI+ YG              
Sbjct: 191 VFGEALAVAEEAGLRPEVRHLANSAGALLRPSARLDLVRVGIATYGIDPAPGVEGSPWDE 250

Query: 236 ------VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 +T  A + L+++  AG  VSY         + + +  +GYA+G         S 
Sbjct: 251 LGLVPAMTVRAELALVKQIEAGAGVSYNHTWVAEEPTTVGLIPVGYAEGIQRRAGNRAS- 309

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                      ++ G   P+ G + MD  + D+ D+  +E G  + ++G     +    D
Sbjct: 310 ----------VWVDGARRPVRGTVCMDQIVVDLGDTA-VEPGAEVVLWGTGADGEPTAQD 358

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A AS T  Y+++ RIG R  + Y
Sbjct: 359 WAEASETIAYEVVTRIGGRMKRRY 382


>gi|304405127|ref|ZP_07386787.1| alanine racemase [Paenibacillus curdlanolyticus YK9]
 gi|304346006|gb|EFM11840.1| alanine racemase [Paenibacillus curdlanolyticus YK9]
          Length = 391

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 92/383 (24%), Positives = 152/383 (39%), Gaps = 29/383 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              R +I L AL+ N  +            A VK NAYG G   IA      GV    V 
Sbjct: 6   RATRAEISLDALRVNLTAFRQAIPEGMLLMASVKANAYGHGAVGIAREAEAFGVDYMGVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++E ++LR       I VL  +      +  D ++   +     L   + L   G    
Sbjct: 66  FLDEAIQLRQAGITKPILVLGYVPAAGLAVARDYDITIALFRYDILEAAAALPENGKQLA 125

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             +++D+G  RLG+    EA  F   +   K  ++  + +H + AD+        Q ERF
Sbjct: 126 VHIKIDSGMGRLGMLPGLEAERFIERALTVKQLRVEGLFTHYSKADELDKAYTEQQYERF 185

Query: 183 RTLIS--HYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKI---NKSHPMQT 234
             ++       +  SL  ++    G   PN+   + R GI +YG         K   ++ 
Sbjct: 186 NGVVDYVRNNALPISLFHAANSATGIDTPNWGHGMLRLGIGMYGLYPSAQVNQKEIALEP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V++ +  + + + A     +SYG +   +    I    IGYADG+   LSG         
Sbjct: 246 VMSLKTAVAMTKTAPEHWGISYGARYVTSGQERIGTLPIGYADGFSRMLSG--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSL----SIEVGDYIQIFGPD----IKLDDV 346
               +  ++G  VPILG I MD  M  +  +      ++  + + I G      I  DD+
Sbjct: 297 --KAEALVRGTRVPILGTICMDQCMIALDPAEQGGVQVQADEEVVIMGRQGDEVITADDI 354

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT NY++   +  R  + +
Sbjct: 355 ADKLGTINYEVTCMLAARVPRVF 377


>gi|149202594|ref|ZP_01879566.1| alanine racemase [Roseovarius sp. TM1035]
 gi|149143876|gb|EDM31910.1| alanine racemase [Roseovarius sp. TM1035]
          Length = 345

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 128/366 (34%), Positives = 178/366 (48%), Gaps = 30/366 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A+  NW +++A+   + TAAVVK +AYGLG  ++AP L  AG + FFV   E
Sbjct: 4   ATLTIDLDAIVANWRALDAM-NTSETAAVVKADAYGLGAARVAPTLARAGARHFFVAVAE 62

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG  LR        I+V  G  PG  +++    LIP+I+S+ Q+    +       HP+ 
Sbjct: 63  EGAPLRETLGAVPAIYVFSGHMPGDAEMLRAHKLIPMINSLDQM---IRHAEALPGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +  +     +LI+SHLACAD+P   +N  QL  FR +
Sbjct: 120 IQLDSGMNRLGMEPAEWAALRQIALAQ---NPTLIMSHLACADEPDHAMNPQQLATFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  S A++ GILL   YHF L RPGI +YGG            VVT E  +I  
Sbjct: 177 TDG-LDVPRSFANTGGILLDAAYHFDLARPGIGVYGGRPFDAA----HPVVTLEIPVIQC 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R  L GE V Y       R + IA  A GYADG    +                 +    
Sbjct: 232 RDLLPGETVGYANSFTANRPTRIATVAAGYADGILRAMG-----------PKTSLWADDT 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQ--IFGPDIKLDDVALASGTTNYDLLVRIGT 363
             PI G+I+MD+   DITD       D     + GP   +D +A  +GT  Y++L  +G 
Sbjct: 281 PCPIAGRISMDLICVDITDLGH----DPASLNLLGPHQTIDTLADNAGTIGYEILTSLGA 336

Query: 364 RYAKFY 369
           RY + Y
Sbjct: 337 RYTRRY 342


>gi|254488701|ref|ZP_05101906.1| alanine racemase [Roseobacter sp. GAI101]
 gi|214045570|gb|EEB86208.1| alanine racemase [Roseobacter sp. GAI101]
          Length = 376

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 132/364 (36%), Positives = 188/364 (51%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A+  NWH +N +S   +T AVVK +AYGLG +++AP L   G + FFV + +
Sbjct: 36  ATLTIDLHAIAANWHMLNRMSQG-QTGAVVKADAYGLGIDRVAPVLAQEGARQFFVATTK 94

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I +  G  PG  + I    L P+I+SV Q       +     HP+ 
Sbjct: 95  EGVALRRVLGPGPAINLFAGHMPGDAEKIRSAQLTPMINSVDQ---LIGHVETLPGHPFG 151

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQ++TG NRLG+   E       + ++    +    SHLACAD+P   +N+ QL+ FR +
Sbjct: 152 LQLNTGMNRLGMDASEWGALRDIALSQHPRLII---SHLACADEPGHKMNAAQLKSFRDM 208

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            +    I  SL ++ GILLG +YHF LTRPGI LYGG   ++     Q VVT +  +I +
Sbjct: 209 TAG-LKIPLSLGATGGILLGADYHFSLTRPGIGLYGGLPFVDA----QPVVTLDLPVIQV 263

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+  AG  V Y       R S IA  + GYADG    +             G      G 
Sbjct: 264 REVPAGGSVGYACGWIAPRPSRIATVSGGYADGLIRAMGN-----------GATMTHNGT 312

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            VP++G+++MD+   DIT       G ++Q+ G    +D VA  +GT  Y++L  +G RY
Sbjct: 313 KVPVVGRVSMDLITVDITTLTD-TPG-HLQLLGQHQSVDTVAGFAGTIGYEILTSLGPRY 370

Query: 366 AKFY 369
            + Y
Sbjct: 371 DRVY 374


>gi|257453404|ref|ZP_05618699.1| alanine racemase [Enhydrobacter aerosaccus SK60]
 gi|257449156|gb|EEV24104.1| alanine racemase [Enhydrobacter aerosaccus SK60]
          Length = 361

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 96/369 (26%), Positives = 160/369 (43%), Gaps = 23/369 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + IDL AL +N   +   +  A+  A+VK NAYG G     PA+         V  ++E 
Sbjct: 6   ITIDLAALTHNLQRVKDYAPTAKVLAMVKANAYGHGAVNCLPAVAQ--ADALGVACLQEA 63

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++L+    Q  + V+ G     E      + I  +    +   ++            L++
Sbjct: 64  LELQQAGWQKLMVVIEGAFSLAEWQYCTAHQIECVVHHQRQLDWALQQPAKKGATVWLKL 123

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NRLG ++ E  +      +       ++ +H A AD      N  Q E F + +  
Sbjct: 124 NTGMNRLGFTVGEIKEIAQQLTSSG--YEIVLTTHFANADVIDHPNNQQQFELFDSTLQM 181

Query: 189 -----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEA 240
                   I+ SL +S+GI+   + H+   RPGI LYG T       K   +Q V+   A
Sbjct: 182 LREQVNPAIKGSLCNSAGIVNWSDRHYDWVRPGIILYGATPVNHATAKQLNLQPVMHFNA 241

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I    AG+ V YG +      + I + ++GYADGYP  +S                
Sbjct: 242 SIMAIHTLKAGDSVGYGSRWTAQAPARIGIISVGYADGYPRVISD-----------DAYV 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G   PI+G++ MDM M D+T +  + +   +Q++G    +D+V   + T +Y+LL  
Sbjct: 291 VVAGQQAPIIGRVAMDMLMVDLTHTTEVNLDCPVQLWGNAPSIDEVGSWNDTISYELLSV 350

Query: 361 IGTRYAKFY 369
           +  R    Y
Sbjct: 351 VTRRPTWIY 359


>gi|83942625|ref|ZP_00955086.1| alanine racemase [Sulfitobacter sp. EE-36]
 gi|83846718|gb|EAP84594.1| alanine racemase [Sulfitobacter sp. EE-36]
          Length = 344

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 191/364 (52%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A+  NW ++N ++G   T AV+K NAYGLG +++AP L   G + FFV   E
Sbjct: 4   ATLSIDLNAIAANWQALNKMTG-CDTGAVIKANAYGLGVDRVAPVLAAQGARKFFVAVAE 62

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G  PG   +I    L P+I+SV Q+      +     H + 
Sbjct: 63  EGVALRRVLGPGPAINVFAGHMPGDADMIRSAALTPMINSVDQM---IAHVEALPGHRFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+++G NRLG+   E       +  +     +LI+SHLACAD+P+  +N+ QL+ FR +
Sbjct: 120 VQLNSGMNRLGMDPAEWAALRDIALAQ---NPTLIMSHLACADEPNHPMNARQLKTFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ GI+LG +YHF LTRPGI +YGG    +       VVT +  +I +
Sbjct: 177 TDG-LNVPRSLAATGGIMLGRDYHFDLTRPGIGVYGGLPFADA----MPVVTLDVPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   G+ V YG      R +L+A  A GYADG    L    +              +G 
Sbjct: 232 REVATGQPVGYGCAWTAPRPTLVATVAAGYADGLIRALGNGATFTH-----------EGR 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            +P++G+++MD+   D+T    +    ++Q+ G    +D VA  +GT  Y++L  +G RY
Sbjct: 281 KLPVVGRVSMDLITVDVTSLTEVPE--HLQLIGNYQSVDTVAGFAGTIGYEVLTALGARY 338

Query: 366 AKFY 369
            + Y
Sbjct: 339 DRVY 342


>gi|296111091|ref|YP_003621472.1| alanine racemase [Leuconostoc kimchii IMSNU 11154]
 gi|295832622|gb|ADG40503.1| alanine racemase [Leuconostoc kimchii IMSNU 11154]
          Length = 374

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 162/378 (42%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++IDL A++ N   +   +   R  AVVK +AYG G   +  ALY+ G++DF V +
Sbjct: 10  RPTWIEIDLKAIQYNARLIMKHADATRMIAVVKADAYGHGAVAVTKALYDIGIRDFAVAT 69

Query: 65  VEEGVKLRLY--TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + E + LR         I +L      Q K++ +  L+P + ++  L      ++     
Sbjct: 70  ISEALILRQEVDHDDFNILLLGVQDVSQVKLMVENRLMPAVGTLEWLYQAVSFLTDSQIL 129

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R+G + Q +  +  H        +L+ + +H A ADD +      Q+ +
Sbjct: 130 DVHLAVDTGMGRMGANSQADVTELYHFIQKSSQLRLNGVFTHFATADDDNEAYYKQQVTK 189

Query: 182 FRTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTV 235
               ++     +       S S +           R G  LYG    +  ++ S  ++ V
Sbjct: 190 LYQWVNGAGIPKKYWHLANSGSALWHHNEIDTDTIRVGSVLYGFNPGSPALDMSIKLKNV 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ ++R+  + +  AGE VSYG          +A   IGYADGY   + G+         
Sbjct: 250 LSLKSRMGAVHQLQAGESVSYGATYTAEHAQWVATLPIGYADGYLRRMGGM--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              K  + G    ++G+ITMD  +  +     +  G  + + G D    I ++D A  +G
Sbjct: 301 ---KVLVSGEEAQVVGRITMDQIVIALDKQYPV--GTEVTLIGRDGDEKITIEDFATYAG 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L   G R  + Y
Sbjct: 356 TIPHEILTSFGVRLPRIY 373


>gi|329119158|ref|ZP_08247848.1| alanine racemase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464717|gb|EGF11012.1| alanine racemase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 351

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 89/365 (24%), Positives = 147/365 (40%), Gaps = 17/365 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L  +I L  L+ N+ ++  + G  +  AV+K +AYG G  + A AL +     F V  
Sbjct: 2   RPLCAEIRLDRLRENYQTLKQIHGG-KMLAVLKADAYGHGALRCAHALADI-ADGFAVAF 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE  +LR       I +L G+    E    +   +  +                     
Sbjct: 60  LEEAAELRRGGIANPIVLLEGVFEAAEYAEVERLNLWPVVGNQWQLESLLAHEWQKPVQV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +R G    E                 +  SH ACAD+    +  +Q E F  
Sbjct: 120 WLKMDSGMHRTGFFPHEYAPAYTALAQSGKVAAIVKTSHYACADEEERGMTEMQTEAFDL 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             +H  G E+  A+S+  L  P       R G++LYG    +      + V+     I  
Sbjct: 180 ACAHLAGEESL-ANSAAALAYPQARRDWGRAGLALYGIDPFLGHDPRFKPVMRLVTEIFG 238

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            +     E + YG      R + + +AA GYADGYP                G    + G
Sbjct: 239 EKVLQPHEPIGYGASFYTKRSTRVGLAAGGYADGYPRRA-----------ATGTPVAVAG 287

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
               ILG+++MDM   ++ D     +G  ++++G  + +++VA A+GT  Y+LL  +  R
Sbjct: 288 RRSRILGRVSMDMLTLELADHEG--IGSEVELWGDTVDINEVAAAAGTIAYELLCNV-KR 344

Query: 365 YAKFY 369
               Y
Sbjct: 345 AKFVY 349


>gi|160895760|ref|YP_001561342.1| alanine racemase [Delftia acidovorans SPH-1]
 gi|226711039|sp|A9BR02|ALR_DELAS RecName: Full=Alanine racemase
 gi|160361344|gb|ABX32957.1| alanine racemase [Delftia acidovorans SPH-1]
          Length = 367

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 152/374 (40%), Gaps = 27/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL++N   +     +A+  AVVK NAYG G E +  AL   G   F +  
Sbjct: 3   RPILATIHSAALRHNLERVRQAVPDAKLWAVVKANAYGHGIENVFEALR--GADGFAMLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++    ++   +    Q+ + +   +    H 
Sbjct: 61  LAEAERVRQLGWRGPILLLEGVFEPRDLELCSRLSIWHAVHCDAQIDWLAAHKTQN-GHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERF 182
             L++++G NRLG + +               +    ++H + AD  +     S QL+RF
Sbjct: 120 VFLKMNSGMNRLGFTPERYRAAWARLNALPQVEEISFMTHFSDADAGAGQPGISAQLQRF 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNY--HFQLTRPGISLYGGTDKINKSHPMQTVV---- 236
                   G  +   S++ +  G +        RPGI LYG +    +       +    
Sbjct: 180 HDATRDLPGERSVGNSAATLRQGDDALVRCDWVRPGIVLYGSSPDYPQHTAAHWDLQPTQ 239

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +RII +++   G+ V YG +        +   A GYADGYP                
Sbjct: 240 TLSSRIIGVQQLTEGQSVGYGSRFTAEGPLRLGTVACGYADGYPRHCG-----------T 288

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASG 351
           G    + G     LG ++MDM   D+T      +G  + ++G       + +D+VA A+G
Sbjct: 289 GTPVLVNGVRTRTLGCVSMDMLAVDLTPVPDAGMGSEVTLWGRASNGAVLPIDEVAEAAG 348

Query: 352 TTNYDLLVRIGTRY 365
           T  Y+L+  +  R 
Sbjct: 349 TLGYELMCAVAPRV 362


>gi|270262189|ref|ZP_06190461.1| alanine racemase [Serratia odorifera 4Rx13]
 gi|270044065|gb|EFA17157.1| alanine racemase [Serratia odorifera 4Rx13]
          Length = 357

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L+A +NN   +   + +A+  +VVK NAYG G + +  +L       F +  
Sbjct: 3   RPITATLHLSAFENNLQVIRRFAPSAKIWSVVKANAYGHGIKHVWRSLGQ--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+ ++ D   +                        
Sbjct: 61  LAEAILLRESGWQGPILLLEGFFKPQDLLLLDRYRLTTSVHSDWQLAAIAAAKLSAPLDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG S          +          ++SH A AD P     + Q+     
Sbjct: 121 YLKVNSGMNRLGFSPDRLHSVWLQAREMGNIASLTLMSHFATADGPQG--VAEQMTVIE- 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
             +    +   LA+S+  L  P  H    RPGI LYG +            +Q  +T  +
Sbjct: 178 GAAAGIPLPRCLANSAATLWHPQTHGSWVRPGIVLYGASPSGQWRDIADSGLQATMTLSS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   +G+ V YG +        I V A GYADGYP                G   
Sbjct: 238 EIIGVQALKSGDRVGYGWRYSAKAAQRIGVVACGYADGYPRHA-----------PSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G +   +G ++MDM   D+T     ++G  ++++G  + +DDVA A+GT  Y+LL  
Sbjct: 287 WVDGVLTHTVGTVSMDMLAVDLTHCPGADIGAEVELWGRRLPVDDVAAAAGTLGYELLTA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAARVP 352


>gi|282877765|ref|ZP_06286578.1| alanine racemase [Prevotella buccalis ATCC 35310]
 gi|281300081|gb|EFA92437.1| alanine racemase [Prevotella buccalis ATCC 35310]
          Length = 824

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L  + +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 465 LEVNLNAVVDNLNHFRSFLKQSTKLVCMIKADAYGAGAVEIAKTLQDHRVDYLAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR     A I V+        K +FD +L P + S   L    K         +P  
Sbjct: 525 GVTLRKNGITANIMVMNPEMSS-FKTLFDYDLEPEVYSFRLLEALVKAAEKEGITDYPVH 583

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPSSHVNSVQLERFR 183
           +++DTG +RLG      ++        +   +   +         D     ++ Q   F 
Sbjct: 584 IKLDTGMHRLGFDPNNDMERLIERLKHQDAIIPRSVFSHFVGSDSDDFDDFSARQFALFD 643

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P     + R G+ LYG   + N+   +  V T 
Sbjct: 644 MASKQLQAAFQHKILRHIDNSAGIEHFPERQLDMCRLGLGLYGIDPRNNQ--VINHVSTL 701

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R   AG+ V Y  + K+  DS+IA   IGYADG    L              G
Sbjct: 702 KTTILQMRMVKAGDTVGYSRKGKIEHDSMIAAIPIGYADGLNRRLGNRH----------G 751

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 752 YCLVNGQRAYYVGNICMDVAMIDVTGI-DCKEGDQVEIFGDHLPVTVLSDTLETIPYEVL 810

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 811 TGVSNRVKRVY 821


>gi|329894372|ref|ZP_08270242.1| Alanine racemase [gamma proteobacterium IMCC3088]
 gi|328923168|gb|EGG30491.1| Alanine racemase [gamma proteobacterium IMCC3088]
          Length = 354

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 105/357 (29%), Positives = 165/357 (46%), Gaps = 17/357 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID+ AL+ N   +      ++   VVK +AYG   + IAPAL N     F V    EG++
Sbjct: 9   IDIEALRANALWLKQHCLGSKLMCVVKADAYGHDLKLIAPALSNI-ADGFAVAHCTEGLE 67

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR   P A I VL G     E      + + V  +                    ++VDT
Sbjct: 68  LRAINPTAPILVLEGTFDAAELNAAYQHDLTVALTNTWQVRDYLARPLDQRPTVWVKVDT 127

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
           G +RLGLS  E         + +L Q +++ +H + AD  +    ++QL R  T +    
Sbjct: 128 GMHRLGLSETELNAL---CRDNRLPQDTVLFTHFSDADTDAEK-TALQLAR-LTRLGERH 182

Query: 191 GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALA 250
            +  S A+S   L+ PN H    RPG SLYGG+   +    ++ V++   RI  IR    
Sbjct: 183 KLMMSAANSPACLMHPNTHLDWVRPGYSLYGGSPLAHIEDNLRPVMSVYTRIHSIRSLPV 242

Query: 251 GELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL 310
           GE V YG      R S IA   IGYADGYP ++             G K ++     P++
Sbjct: 243 GECVGYGSTWCAERASKIATLPIGYADGYPRSIK-----------SGTKVWLHNQFAPVV 291

Query: 311 GKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           G+++MD+   D+TD  + + GD ++++G  + L  +A  +  + Y+++ RI  R  +
Sbjct: 292 GRVSMDLLTIDVTDIPAAKAGDLVEVWGQHMTLHALANHNELSGYEIMARIPKRLPR 348


>gi|238794498|ref|ZP_04638107.1| Alanine racemase, catabolic [Yersinia intermedia ATCC 29909]
 gi|238726181|gb|EEQ17726.1| Alanine racemase, catabolic [Yersinia intermedia ATCC 29909]
          Length = 358

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   + L+AL +N   +   +G A+  +VVK NAYG G  +I  AL       F + 
Sbjct: 2   SRPISATLHLSALSHNLSIVRRHAGAAKIWSVVKANAYGHGLARIWQALDA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            + E + LR    Q  I +L G    Q+  + D   +  +                    
Sbjct: 60  DLNEAIMLREQGWQGPILLLEGFFRTQDLALVDHYRLTTVVHSDWQLDAINAARLTAPPN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG  + +A      + +        ++SH A AD+      S Q  R +
Sbjct: 120 IYLKLNSGMNRLGFPIGQADAVWQWANSISNIGEVTLMSHFANADNHMGA--SEQFTRIQ 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAE 239
              S +       A+S+ IL  P  H+   RPGI LYG +   + +      ++ V+   
Sbjct: 178 Q-ASGHIAAARCFANSAAILRNPETHYDWVRPGIILYGASPSGDVNDIAGIGLRPVMGLH 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II  +   AG  V YG +   T    I V A GYADGYP                G  
Sbjct: 237 SEIIATQMLSAGHSVGYGSRYSATGTQRIGVVACGYADGYPRLA-----------PSGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G +   +G I+MDM   D+T     +VG  ++I+G ++ +DDVA A+GT  Y+L+ 
Sbjct: 286 IRVDGILTHTVGSISMDMLTVDLTPCPQAQVGSKVEIWGDNLPIDDVAAAAGTVGYELMC 345

Query: 360 RIGTRY 365
            + +R 
Sbjct: 346 ALASRV 351


>gi|319790926|ref|YP_004152566.1| alanine racemase [Variovorax paradoxus EPS]
 gi|315593389|gb|ADU34455.1| alanine racemase [Variovorax paradoxus EPS]
          Length = 366

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 27/373 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   AL+NN   +   + +AR  AVVK NAYG G E++   L   G   F +  
Sbjct: 3   RPILATVHTAALRNNLERVRRSALDARVWAVVKANAYGHGIERVYEGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  + +L G+      ++    +L   +    Q+   +   +      
Sbjct: 61  LAEAERVRALGWRGPVLLLEGVFDARDLELCSRLDLWHTVHCDEQIDMLAAHKTL-KPQR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + +                   +++H + AD       + QLE F 
Sbjct: 120 VFLKMNSGMNRLGFTPERFGSAWTRLNALTQVDEISLMTHFSDADGARGI--AHQLEAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV----VTAE 239
                  G  +   S++ +           RPGI LYG                  +T  
Sbjct: 178 RATRDLPGERSIANSAATLRHADQTRGDWVRPGIVLYGSAPDFPLHDAAHWQLQPTMTLS 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +++ ++   AG+ + YG          I VAA+GYADGYP   +            G  
Sbjct: 238 TQLLSVQTLKAGDTIGYGSNFTAEGPLTIGVAAVGYADGYPRHCN-----------TGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDVALASGTT 353
             + G    ++G+++MDM   D+T     + G  + ++G        + +D+VA A+GT 
Sbjct: 287 VLVNGVRTRMVGRVSMDMITVDLTPVPDAKFGAEVTLWGRSASTGAVLPIDEVAQAAGTV 346

Query: 354 NYDLLVRIGTRYA 366
            Y+L+  +  R  
Sbjct: 347 GYELMCAVAQRVP 359


>gi|33355854|gb|AAQ16274.1| serine racemase [Enterococcus faecalis]
 gi|77380201|gb|ABA71733.1| VanTG [Enterococcus faecalis]
          Length = 712

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 165/373 (44%), Gaps = 29/373 (7%)

Query: 9   LKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L  L++N +++  A+S      AVVK  AYG G  ++   L   GV  F V +++E
Sbjct: 347 LEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYLEQIGVSSFAVATIDE 406

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G++LR Y   + I +L    P + K +    L   +         +     G      ++
Sbjct: 407 GIRLRKYGISSEILILGYTSPSRAKELCKYELTQTLIDYRYSLLLN---KQGYDIKAHIK 463

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA--CADDPSSHVNSVQLERFRTL 185
           +DTG +RLG S ++          K +    +     A    ++      + Q+  F  +
Sbjct: 464 IDTGMHRLGFSTEDKDKILAAFSLKHIKVAGIFTHLCAADSLEENDVAFTNKQIGSFYKV 523

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHPMQTVV 236
           +   K       +  + SS G+L  P       R G++LYG      DK      ++ V+
Sbjct: 524 LDWLKSSGLNIPKVHIQSSYGLLNYPELECDYIRVGVALYGVLSSTNDKTKLELDLRPVL 583

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + +A+++LIRK   GE V Y      TRDSLIA+  IGYADG+P  LS            
Sbjct: 584 SLKAKVVLIRKIKQGESVGYSRAFTATRDSLIAILPIGYADGFPRNLS----------CG 633

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                I G   PI+GKI MD    D+TD  +++ G    + G     +I    VA ++ +
Sbjct: 634 NSYVLIGGRQAPIVGKICMDQLAVDVTDIPNVKTGSIATLIGKDGKEEITAPMVAESAES 693

Query: 353 TNYDLLVRIGTRY 365
              +LL R+G R 
Sbjct: 694 ITNELLSRMGHRL 706


>gi|190891117|ref|YP_001977659.1| alanine racemase [Rhizobium etli CIAT 652]
 gi|190696396|gb|ACE90481.1| alanine racemase protein [Rhizobium etli CIAT 652]
          Length = 333

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 160/328 (48%), Positives = 219/328 (66%), Gaps = 2/328 (0%)

Query: 44  GCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI 103
           G E    ALY AG +DFFV +V+EGV LRLY P+ARIFVL GI PG E+  FD +L+PVI
Sbjct: 2   GIEDAGEALYTAGARDFFVATVDEGVTLRLYAPEARIFVLSGIWPGTERRFFDNDLVPVI 61

Query: 104 SSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISH 163
           SS  Q  F+  +++    +P AL VDTGFNRLGL + +A+    +          L++SH
Sbjct: 62  SSDEQFAFWMAVLADYGDYPCALHVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSH 121

Query: 164 LACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT 223
           LAC DDPS  +N  QLE FR + + Y+G+++SLA+S+GI LG +YHF+LTRPGI+LYGG 
Sbjct: 122 LACGDDPSHAMNRQQLESFRRVTAAYEGVDSSLAASAGIFLGEDYHFELTRPGIALYGGE 181

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                ++PM+ V TAEAR+I +R   AGE VSYG   +L RDS +A+ + GYADGY  + 
Sbjct: 182 VVCGMANPMRPVATAEARVIQVRTVKAGETVSYGRALQLPRDSRLAIVSAGYADGYMRSQ 241

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDI 341
           S         V  GG+GFI G+ VP+ G+ITMD+T+FD+TD     +  GDY+++FG ++
Sbjct: 242 SSGGVPLRQVVPQGGQGFIAGHKVPVAGRITMDLTIFDVTDLPENAVRAGDYVELFGKNV 301

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            LDDVA A+GT  Y++L  +G R+ + Y
Sbjct: 302 ALDDVARAAGTIGYEILTSMGLRHERRY 329


>gi|50843722|ref|YP_056949.1| alanine racemase 1 [Propionibacterium acnes KPA171202]
 gi|289424661|ref|ZP_06426444.1| alanine racemase [Propionibacterium acnes SK187]
 gi|289427468|ref|ZP_06429181.1| alanine racemase [Propionibacterium acnes J165]
 gi|295131811|ref|YP_003582474.1| alanine racemase [Propionibacterium acnes SK137]
 gi|81826355|sp|Q6A5H2|ALR_PROAC RecName: Full=Alanine racemase
 gi|50841324|gb|AAT83991.1| alanine racemase 1 [Propionibacterium acnes KPA171202]
 gi|289155358|gb|EFD04040.1| alanine racemase [Propionibacterium acnes SK187]
 gi|289159398|gb|EFD07589.1| alanine racemase [Propionibacterium acnes J165]
 gi|291376898|gb|ADE00753.1| alanine racemase [Propionibacterium acnes SK137]
 gi|313806771|gb|EFS45269.1| alanine racemase [Propionibacterium acnes HL087PA2]
 gi|313812020|gb|EFS49734.1| alanine racemase [Propionibacterium acnes HL083PA1]
 gi|313815645|gb|EFS53359.1| alanine racemase [Propionibacterium acnes HL059PA1]
 gi|313821611|gb|EFS59325.1| alanine racemase [Propionibacterium acnes HL036PA1]
 gi|313824443|gb|EFS62157.1| alanine racemase [Propionibacterium acnes HL036PA2]
 gi|313826790|gb|EFS64504.1| alanine racemase [Propionibacterium acnes HL063PA1]
 gi|313829078|gb|EFS66792.1| alanine racemase [Propionibacterium acnes HL063PA2]
 gi|313832454|gb|EFS70168.1| alanine racemase [Propionibacterium acnes HL007PA1]
 gi|314916134|gb|EFS79965.1| alanine racemase [Propionibacterium acnes HL005PA4]
 gi|314917397|gb|EFS81228.1| alanine racemase [Propionibacterium acnes HL050PA1]
 gi|314921737|gb|EFS85568.1| alanine racemase [Propionibacterium acnes HL050PA3]
 gi|314926087|gb|EFS89918.1| alanine racemase [Propionibacterium acnes HL036PA3]
 gi|314930661|gb|EFS94492.1| alanine racemase [Propionibacterium acnes HL067PA1]
 gi|314955415|gb|EFS99820.1| alanine racemase [Propionibacterium acnes HL027PA1]
 gi|314959415|gb|EFT03517.1| alanine racemase [Propionibacterium acnes HL002PA1]
 gi|314961740|gb|EFT05841.1| alanine racemase [Propionibacterium acnes HL002PA2]
 gi|314975119|gb|EFT19214.1| alanine racemase [Propionibacterium acnes HL053PA1]
 gi|314977529|gb|EFT21624.1| alanine racemase [Propionibacterium acnes HL045PA1]
 gi|314979919|gb|EFT24013.1| alanine racemase [Propionibacterium acnes HL072PA2]
 gi|314986875|gb|EFT30967.1| alanine racemase [Propionibacterium acnes HL005PA2]
 gi|315086530|gb|EFT58506.1| alanine racemase [Propionibacterium acnes HL002PA3]
 gi|315087933|gb|EFT59909.1| alanine racemase [Propionibacterium acnes HL072PA1]
 gi|315096840|gb|EFT68816.1| alanine racemase [Propionibacterium acnes HL038PA1]
 gi|315102406|gb|EFT74382.1| alanine racemase [Propionibacterium acnes HL046PA1]
 gi|315109676|gb|EFT81652.1| alanine racemase [Propionibacterium acnes HL030PA2]
 gi|327333048|gb|EGE74780.1| alanine racemase [Propionibacterium acnes HL096PA2]
 gi|327334042|gb|EGE75757.1| alanine racemase [Propionibacterium acnes HL096PA3]
 gi|327444331|gb|EGE90985.1| alanine racemase [Propionibacterium acnes HL013PA2]
 gi|327446804|gb|EGE93458.1| alanine racemase [Propionibacterium acnes HL043PA2]
 gi|327448756|gb|EGE95410.1| alanine racemase [Propionibacterium acnes HL043PA1]
 gi|327455097|gb|EGF01752.1| alanine racemase [Propionibacterium acnes HL087PA3]
 gi|327456233|gb|EGF02888.1| alanine racemase [Propionibacterium acnes HL083PA2]
 gi|328755932|gb|EGF69548.1| alanine racemase [Propionibacterium acnes HL087PA1]
 gi|328757652|gb|EGF71268.1| alanine racemase [Propionibacterium acnes HL020PA1]
 gi|328759003|gb|EGF72619.1| alanine racemase [Propionibacterium acnes HL025PA2]
 gi|328759903|gb|EGF73492.1| alanine racemase [Propionibacterium acnes HL099PA1]
 gi|332676676|gb|AEE73492.1| alanine racemase [Propionibacterium acnes 266]
          Length = 375

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|33864030|ref|NP_895590.1| alanine racemase [Prochlorococcus marinus str. MIT 9313]
 gi|33635614|emb|CAE21938.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9313]
          Length = 398

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 109/381 (28%), Positives = 173/381 (45%), Gaps = 28/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++++  A++ N  S+   L  +    AVVK + YG G   +A A    G +   V
Sbjct: 26  RQRAWVEVNPAAVEANCRSLRRHLCESCALMAVVKADGYGHGALTVARAALQGGAKSLGV 85

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG++LR     A + VL    H    K      L+P +SS+ +      L    G 
Sbjct: 86  ATLQEGIELRQAGHNAPVLVLGNLTHSEDLKACLHWQLMPTLSSMREALLCQNLADGSGR 145

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP----SSHVNS 176
                L++DTG  RLG  L+EA        +    +L  I SHLA AD      ++ V  
Sbjct: 146 QFRIQLKIDTGMTRLGCELKEAPMLVEAIGHLNQLELKGIYSHLALADGDLQGKAAMVTD 205

Query: 177 VQLERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SH 230
            Q + F T++      + G    LA+S+G L     H+ + R G++LYG +  +      
Sbjct: 206 QQQQHFETVLRTLPEQHNGFTRHLANSAGTLRDRGLHYDMVRVGLALYGHSPNLQLQGKV 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +Q  ++ +AR+ LIR   AG  VSYG +    R S +AV  IGYADG   +LSG  S  
Sbjct: 266 DLQPALSVKARVTLIRDVPAGVGVSYGHRFTTRRPSRLAVVGIGYADGVSRSLSGQISAI 325

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
           +            G ++P +G ITMD  + D T+   +EVG  + + G D    I     
Sbjct: 326 A-----------DGQLLPQVGAITMDQLVLDATNHPDLEVGSIVTLLGKDGDACITPQQW 374

Query: 347 ALASGTTNYDLLVRIGTRYAK 367
           +  SG+  +++L     R  +
Sbjct: 375 SDLSGSIPWEVLCSFKHRLPR 395


>gi|303236059|ref|ZP_07322662.1| alanine racemase [Prevotella disiens FB035-09AN]
 gi|302483932|gb|EFL46924.1| alanine racemase [Prevotella disiens FB035-09AN]
          Length = 826

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA  L    V    V   +E
Sbjct: 467 LEVNLNAVVDNLNWYRSFLKPETKLVCMIKADAYGAGAVEIAKTLEEHRVDYLAVAVADE 526

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR    ++ I ++        K +FD  L P I S   L    K         +P  
Sbjct: 527 GATLRRNGIKSNIMIMNPEMSS-FKTLFDYELEPEIYSFRLLDALIKAAEKEGITGYPVH 585

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFR 183
           ++ DTG +RLG + + +         ++       + SH   +D+      ++ Q + F 
Sbjct: 586 IKFDTGMHRLGFNPRTDIAQLIEKLRHQNALIPRSVFSHFVGSDNNDFDSFSAEQFKLFD 645

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P     + R G+ LYG   + N+     +  T 
Sbjct: 646 EGSKQLQSAFSHRILRHIDNSAGIEHFPERQLDMCRLGLGLYGINPRNNEIINNVS--TL 703

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R    GE V Y  +  + +DS+IA   IGYADG    L               
Sbjct: 704 KTTILQMRNVPKGETVGYSRRGVIEKDSVIAAIPIGYADGLNRKLGNR----------NC 753

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ + D+T     + GD ++IFG ++ +  ++    T  Y++L
Sbjct: 754 YCLVNGQKADYVGNICMDVALIDVTGI-DCKEGDSVEIFGDNLPVTILSNVLETIPYEVL 812

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 813 TTVSNRVKRVY 823


>gi|193211960|ref|YP_001997913.1| alanine racemase [Chlorobaculum parvum NCIB 8327]
 gi|193085437|gb|ACF10713.1| alanine racemase [Chlorobaculum parvum NCIB 8327]
          Length = 384

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 164/378 (43%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 I L  L++N   + A+SG+  R   +VK +AYG G  ++   L   G+++F V 
Sbjct: 18  NLSEALISLGNLRHNLACIQAISGSRCRIMGIVKADAYGHGAAQVTATLEEEGIREFGVA 77

Query: 64  SVEEGVKLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-G 119
           ++ E ++L+      P++RI        G  +   + ++   +     +       +  G
Sbjct: 78  NIHEAIELKQSHRMQPESRILAFASPLAGHIEHYLEHDVEMTVCDHETVRTAEAKAAASG 137

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                  ++DTG  RLG++ +EA              L  I +H A     +    + QL
Sbjct: 138 RRLRVQAKIDTGMGRLGVTPEEAHSLLELIDRCPNLDLVGIYTHFAEGH-KAGGFTARQL 196

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPM 232
           E+F  +   Y+      +    A+S  I+  P+    + RPGI LYG      +  + P+
Sbjct: 197 EQFLDVTGGYEQRTGRTVLKHAANSGAIVSTPSARLDMVRPGILLYGCHPMDAEPTNVPV 256

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+  + +++ ++K  AG  +SY         + IA  + GYADG   TLS        
Sbjct: 257 KPVMQFQCKVMFVKKVTAGTSISYSRTWSAPTSTNIATLSAGYADGVHRTLSN------- 309

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASG 351
                    I G     +G +TMD TM D+  + S++VGD   +FG       + A+A+G
Sbjct: 310 ----KATVSIGGNRYHQVGTVTMDQTMVDLGQNRSVKVGDTAVLFGWDGPSAGEQAIAAG 365

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+LL  +  R  + +
Sbjct: 366 TISYELLCAVSKRVKRVF 383


>gi|314985124|gb|EFT29216.1| alanine racemase [Propionibacterium acnes HL005PA1]
 gi|314990744|gb|EFT34835.1| alanine racemase [Propionibacterium acnes HL005PA3]
          Length = 375

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILNLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|310767806|gb|ADP12756.1| Alanine racemase, catabolic [Erwinia sp. Ejp617]
          Length = 356

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 94/367 (25%), Positives = 154/367 (41%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL+ N       +G AR  +VVK NAYG G + +  +L       F + 
Sbjct: 2   SRPIVATINRAALRQNLAIARYTAGGARLWSVVKANAYGHGIDHVWQSLNE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  I D   +                       
Sbjct: 60  NLEEAILLRERGWKKPILLLEGFFHPDDLQILDRYRLTTSVHSNWQINALAQAKLSAPID 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   +          + +      +++H   AD  ++   +  L+R  
Sbjct: 120 IYLKMNSGMNRLGFQPERVHGVWQKLRSLENVGELTLMAHF--ADAETAEGVAEPLKRIE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAE 239
              +       SLA+S+  L  P  H+   RPGI LYG +            +Q V+T  
Sbjct: 178 Q-AAEGLECPRSLANSAATLWHPQTHYDWVRPGIILYGASPSGQWQDIAGSGLQPVMTLT 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +++  AG  V YG + +      I V A GYADGYP                G  
Sbjct: 237 SEVIAVQQLAAGSGVGYGSRYRANCSQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G ++MDM   D+T      +G  ++++G +IK+DDVA ASGT  Y+L+ 
Sbjct: 286 IRVDGEKTQIVGAVSMDMITVDLTPCPQAGIGSQVELWGDNIKIDDVASASGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|227540139|ref|ZP_03970188.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227240000|gb|EEI90015.1| bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 813

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/369 (29%), Positives = 164/369 (44%), Gaps = 23/369 (6%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL++N +    L   + +  A+VK  +YG G  +IA  L    V    V   +E
Sbjct: 457 LEINLNALEHNLNVYRGLVPKDVKMMAMVKAFSYGSGSFEIANLLQFNQVDYLTVAYADE 516

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYAL 126
           GV+LR       I V+       E ++       + S      F S +   G  + P  +
Sbjct: 517 GVELRNAGITLPIVVMSPDENAFESVVQHNLEPEIYSFRILHAFISFVRIKGLKNFPIHI 576

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL---ERF 182
           +VDTG +RLG    EA         + + ++    SHLA  A+   +   + Q+   ++F
Sbjct: 577 KVDTGMHRLGFMPDEAEALIDILRQQDVVRVQSAFSHLASAANSQDNAFTAEQILKLDQF 636

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
              +    G      +A++SGI L P+ +F + R GI +YG          +QTV   + 
Sbjct: 637 AKKLQQELGYSFLRHIAATSGIELWPSAYFDMVRLGIGMYGVEAS-RTDLSLQTVGVLKT 695

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  I+   A E V Y     L RDS IA   IGYADGY                  GK 
Sbjct: 696 NVTQIKHIPASETVGYNRHGVLYRDSKIATIKIGYADGYDRRFGNGV----------GKM 745

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G++VP +G I MDM M D+TD   +   D + +F PDI     A + GT  Y+LLV 
Sbjct: 746 LVNGHLVPTVGDICMDMCMLDVTDIA-VSEEDEVVVF-PDITAA--ANSIGTIPYELLVN 801

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 802 ISQRVKRVY 810


>gi|331265917|ref|YP_004325547.1| alanine racemase [Streptococcus oralis Uo5]
 gi|326682589|emb|CBZ00206.1| alanine racemase [Streptococcus oralis Uo5]
          Length = 367

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 158/376 (42%), Gaps = 25/376 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I L A++ N H M           AVVK NAYG G   +A A+ +  V  F V
Sbjct: 6   HRPTKALICLEAIQQNIHQMGVHIPEGTLKWAVVKANAYGHGAVAVAKAIQD-DVDGFCV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR      RI +L         +  + ++   ++ +  +       +     
Sbjct: 65  SNIDEAIELRQARLSKRILILGVSEIEAIGLAKEYDITLTVAGLEWVRALVATGADLSGL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++D+G  R+G       +   +   +   ++  I +H A AD+ S    + QLERF
Sbjct: 125 SVHLKIDSGMGRIGFREASEAEQAQDLLKQHGARVEGIFTHFATADEESDTYFNNQLERF 184

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVT 237
           + +++  K +      ++S+  L      F   R G ++YG       ++  + +   +T
Sbjct: 185 KAILASMKEVPELVHASNSATTLWHAETIFNAVRMGDAMYGLNPSGEVLDLPYDLTPALT 244

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ ++ ++  LAG  + YG   +   + +IA   IGYADG+   +              
Sbjct: 245 LESALVHVKTVLAGACMGYGATYQADSEQIIATVPIGYADGWTRDMQNFS---------- 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G   PI+G+++MD     +     +  G  + + G     +I    VA   GT 
Sbjct: 295 --VLVDGQACPIVGRVSMDQITIRLPKVYPL--GTKVTLIGTNGDKEITATQVAAYRGTI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++  +  R  + Y
Sbjct: 351 NYEVVCLLSDRIPREY 366


>gi|157273511|gb|ABV27410.1| alanine racemase [Candidatus Chloracidobacterium thermophilum]
          Length = 398

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 100/380 (26%), Positives = 158/380 (41%), Gaps = 29/380 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSV 65
              +IDL  L+ N+  +   +G     A+VK NAYG G   +A  L + A    F V + 
Sbjct: 9   AWAEIDLARLRQNYQWLRQQAG-VPVMAMVKANAYGHGLLPVATFLQDVAKADWFGVATP 67

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
           EEG+ LR       I VL G   GQE  I   +L   +     +    +     G S   
Sbjct: 68  EEGIALRRAGITRPILVLGGFWFGQEADIVYYDLATTLPDPAYIPALEQAASRAGRSVAI 127

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
            L++DTG  RLGLS  +         +    +L  +++H A AD    +     Q+ R  
Sbjct: 128 HLEIDTGIGRLGLSPDQLTAVLERLKSCSHLRLDGLMTHFASADLPEYADFTRDQIRRHA 187

Query: 184 TLISH-----YKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDK----INKSHPMQ 233
             +       ++     LA+S+G+    P     L R G  LYG        +    P Q
Sbjct: 188 LALQQVRAAGWEPRYVHLANSAGLHAFLPEAAGNLVRLGGLLYGIAGDALSPVFPPPPTQ 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++  ARI+ ++   AG  + YG      R + +A   +GY DG     S         
Sbjct: 248 PVLSLHARILGLKTVPAGTPLGYGCTFVTCRPTRVATVPLGYGDGLHRIQSNR------- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G+  ++G  VPI+G+++MD TM D+TD  ++ +GD     G      I  ++ A  
Sbjct: 301 ----GQAIVRGRKVPIVGRVSMDTTMLDVTDVPNVTLGDVATFIGRQGETTITAEEYAAV 356

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            G+   +    +  R  ++Y
Sbjct: 357 MGSIALEATTALTARLPRWY 376


>gi|197263989|ref|ZP_03164063.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197242244|gb|EDY24864.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
          Length = 356

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCS---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+       +G  ++++G +IK+DDVA ASGT  Y+LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLMPCPQAGIGTPVELWGKEIKVDDVASASGTLGYELLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|312887539|ref|ZP_07747133.1| alanine racemase [Mucilaginibacter paludis DSM 18603]
 gi|311299909|gb|EFQ76984.1| alanine racemase [Mucilaginibacter paludis DSM 18603]
          Length = 822

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/354 (26%), Positives = 151/354 (42%), Gaps = 21/354 (5%)

Query: 25  ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLY 84
            L  + +  A+VK  +YG G  ++A  L   GV    V  ++EG+ LR       I VL 
Sbjct: 478 KLGPDVKIMAMVKAFSYGSGSFEVANLLQFNGVDYLAVAYIDEGIALRNAGITLPIMVLN 537

Query: 85  GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--SHPYALQVDTGFNRLGLSLQEA 142
                    + +  L P I S      + K        ++P  +++D+G +RLG    E 
Sbjct: 538 P-EASAFDKLVEFTLQPEIYSFTLFDEFVKFAQLKNIFNYPIHIKIDSGMHRLGFEDFEI 596

Query: 143 LDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRTLISH-----YKGIEASL 196
                     +   +  I SHLA +D +        Q+  F              +   +
Sbjct: 597 ETLCDLLEQNQYVHIQSIFSHLAGSDAEMHDEFTLKQIMVFEKAYHQIEKVLNYKVMRHM 656

Query: 197 ASSSGILLGPNYHFQLTRPGISLYGGTDKI-NKSHPMQTVVTAEARIILIRKALAGELVS 255
           A++S I   P   F + R GI LYG    I N+++ +Q V T +  +  ++K  AGE + 
Sbjct: 657 ANTSAITRWPVAQFDMVRLGIGLYGIDSAIKNEANQLQPVATLKTSVSQVKKIKAGETIG 716

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           Y     L  D  IA   IGYADGY                  GK  IKG +VP +G ++M
Sbjct: 717 YNRNGSLLADGKIATVRIGYADGYLRAFGNGV----------GKMLIKGVLVPTVGNVSM 766

Query: 316 DMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           DM M D++    ++ GD + +F  + K+++VA    T  Y++L  +  R  + Y
Sbjct: 767 DMCMLDVSAV-EVKEGDEVVVFNEEYKIEEVAKQINTIPYEILTNVSQRVKRVY 819


>gi|89068949|ref|ZP_01156331.1| alanine racemase [Oceanicola granulosus HTCC2516]
 gi|89045530|gb|EAR51594.1| alanine racemase [Oceanicola granulosus HTCC2516]
          Length = 345

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 129/361 (35%), Positives = 185/361 (51%), Gaps = 26/361 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  NW +++A+ G+A T AVVK + YGLG   +A  L+ AG + FFV   EEG
Sbjct: 6   LTIDLDALAANWRALDAM-GSAETGAVVKADGYGLGVAPVARTLHKAGARRFFVAVAEEG 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR    P   + V  G  PG  ++I D  L+P+++S+ Q+    +       HP+ +Q
Sbjct: 65  AALRQALGPNVDVCVFGGHMPGDSEMIGDLGLVPMLNSLEQVL---RHFEALPGHPFGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+ + E       +  +   +  L++SHLACAD+P   +N+ QL  F  +  
Sbjct: 122 LDTGMNRLGMEMSEWAAVAEIALQQ---KPVLVMSHLACADEPDHEMNTRQLAEFHRMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILLG  Y F LTRPGI LYGG          + VVT E  +I +R 
Sbjct: 179 G-IKVPRSLAATGGILLGQEYQFDLTRPGIGLYGGRPFEEA----RPVVTLELPVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R + +A  A GYADG    LS   S            +      
Sbjct: 234 VEPGESVGYGNSWIAERRTRLATVAAGYADGITRHLSNRASL-----------WHGDAPC 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI G+++MD+   DITD       D + +      +DD+A  +GT  Y++L ++G RY +
Sbjct: 283 PIRGRVSMDLICADITDLPE--TPDSLALLNGRQGVDDIADIAGTIGYEVLTQLGPRYTR 340

Query: 368 F 368
            
Sbjct: 341 R 341


>gi|254460815|ref|ZP_05074231.1| alanine racemase [Rhodobacterales bacterium HTCC2083]
 gi|206677404|gb|EDZ41891.1| alanine racemase [Rhodobacteraceae bacterium HTCC2083]
          Length = 344

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 130/362 (35%), Positives = 181/362 (50%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW +++  S  A T AVVK +AYG G  + A  L   G + FFV   EE 
Sbjct: 6   LSIDLAAIAANWSALDRFS-TAETGAVVKADAYGTGIGRAARRLAQTGARKFFVAVAEEA 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R    P   I++L G   G   +I D +LIP++SS+ Q+    +        P+ +Q
Sbjct: 65  ADIRQAIGPDPEIYILSGHMSGDTDMIADLHLIPLLSSIDQML---RHFEALPGTPFGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+   E          +      LI+SHLACADDPS  +N+ QL  F  +  
Sbjct: 122 LDTGMNRLGMEAGEWEAVKSLVLPQNPM---LIMSHLACADDPSHPMNAQQLAAFIEMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
                  SLA++ GILLGP YHF +TRPGI LYGG    + +     VV+    II  R 
Sbjct: 179 GIDA-PRSLAATGGILLGPEYHFDVTRPGIGLYGGLPFADAT----PVVSLSLPIIQTRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
            LAGE V YG      RDS I   + GYADG    +                 F  G  V
Sbjct: 234 VLAGESVGYGNTWIAERDSRIVTVSCGYADGILRVMG-----------PKTHFFANGTAV 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P+ G+I+MD    D+TD   +     +++ GP   ++ +A  +GT  Y++L  +G RY++
Sbjct: 283 PVAGRISMDSICIDVTDVSDLP--SALELLGPQQSIETLAQNAGTIGYEILTSLGARYSR 340

Query: 368 FY 369
            Y
Sbjct: 341 RY 342


>gi|238797371|ref|ZP_04640871.1| Alanine racemase, catabolic [Yersinia mollaretii ATCC 43969]
 gi|238718802|gb|EEQ10618.1| Alanine racemase, catabolic [Yersinia mollaretii ATCC 43969]
          Length = 357

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 153/366 (41%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + L+AL++N   +    G+A   +VVK NAYG G  +I   L       F +  
Sbjct: 3   RPIAATLHLSALRHNLSLIRRHVGSANIWSVVKANAYGHGLARIWQGLDA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR    Q  I +L G    Q+  + D   +                        
Sbjct: 61  LNEAILLREQGWQGPILLLEGFFQPQDLALLDHYRLTTTVHSDWQLEAINAARLSAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG  + +A      + +        ++SH A AD+        Q  R + 
Sbjct: 121 YLKLNSGMNRLGFPVGQADAVWQWANSLSNVGEVTLMSHFANADNHIGA--GEQFSRIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
             S +       A+S+ IL  P  H+   RPGI LYG +   +        ++ V+  ++
Sbjct: 179 -ASGHIPAARCFANSAAILRNPETHYDWVRPGIILYGASPSGDIADIAGIGLRPVMQLQS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II I+   AG  V YG +   +    I V A GYADGYP                G   
Sbjct: 238 EIIAIQALSAGHQVGYGSRYSASGSQRIGVVACGYADGYPRLA-----------PSGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     +VG  ++I+G  + +D+VA A+GT  Y+L+  
Sbjct: 287 RVDGVLTQTVGAISMDMLTVDLTPCPQAQVGSQVEIWGETLPIDNVAAAAGTVGYELMCA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAARVP 352


>gi|296875898|ref|ZP_06899959.1| alanine racemase [Streptococcus parasanguinis ATCC 15912]
 gi|296433139|gb|EFH18925.1| alanine racemase [Streptococcus parasanguinis ATCC 15912]
          Length = 370

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/378 (20%), Positives = 153/378 (40%), Gaps = 25/378 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +     ++DL A+  N   ++    +     AVVK NAYG G   +   L    V  F 
Sbjct: 5   KHRPTVARVDLDAIAFNVQQVSEHIPSQALKYAVVKANAYGHGVVAVTQKLAPQ-VDGFC 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V++++E +++R    Q  I +L  +      +  + ++   ++S+  L       +    
Sbjct: 64  VSNMDEALEIREEGLQHPILILGVVPSETVNLAKEHDIRLTVASLAWLDQLLGEEADLSG 123

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++VD+G  R+G    E +            ++  I +H A AD+        Q   
Sbjct: 124 LKVHIKVDSGMGRIGFRTIEDIKVAERLLLAAGAEIEGIFTHFATADEADDRKFQAQYHF 183

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F+ +++  + +   +   +S+  L   +  F   R G  +YG       +   + ++  +
Sbjct: 184 FKEVLAALETLPPIVHASNSATSLWHADTIFTAVRLGDVMYGLNPSGSVLALPYEIKPAL 243

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + ++ +++  AG+ + YG          I    IGYADG+   +             
Sbjct: 244 SLVSELVHVKQLEAGQDIGYGATYTTEESQWIGTIPIGYADGWIREMQNF---------- 293

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                IKG   PI+G+++MD     + + L +  G  + + G     +I   +VA   GT
Sbjct: 294 --HVLIKGDYCPIVGRVSMDQVTVRLPEELPL--GTKVTLIGREGEKEITATEVADYRGT 349

Query: 353 TNYDLLVRIGTRYAKFYT 370
            NY+++  +  R  + YT
Sbjct: 350 INYEVVCLLSDRIPRDYT 367


>gi|188595861|pdb|2VD8|A Chain A, The Crystal Structure Of Alanine Racemase From Bacillus
           Anthracis (Ba0252)
 gi|188595862|pdb|2VD8|B Chain B, The Crystal Structure Of Alanine Racemase From Bacillus
           Anthracis (Ba0252)
          Length = 391

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 88/387 (22%), Positives = 152/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M    F R   +++DL A+ NN   +      +    AVV  NAYG     +A     AG
Sbjct: 3   MEEAPFYRDTWVEVDLDAIYNNVTHIXEFIPSDVEIFAVVXGNAYGHDYVPVAXIALEAG 62

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V  ++E + LR     A I VL    P    +  + ++   +     +     L 
Sbjct: 63  ATRLAVAFLDEALVLRRAGITAPILVLGPSPPRDINVAAENDVALTVFQXEWVDEAIXLW 122

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               +  Y +  D+G  R+G+  + E   F  +       +L  + +H A AD+  +   
Sbjct: 123 DGSSTMXYHINFDSGMGRIGIRERXELXGFLXSLEGAPFLELEGVYTHFATADEVETSYF 182

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q   F   +S              A+S+  L      F   R GI++YG +  +    
Sbjct: 183 DXQYNTFLEQLSWLXEFGVDPXFVHTANSAATLRFQGITFNAVRIGIAMYGLSPSVEIRP 242

Query: 228 -KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  ++    +  I++ + G+ +SY    +   +  IA  AIGYADG+   L G 
Sbjct: 243 FLPFXLEPALSLHTXVAHIKQVIXGDGISYNVTYRTXTEEWIATVAIGYADGWLRRLQGF 302

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                       +  + G  VPI+G++TMD  M  +     + +G  + + G      I 
Sbjct: 303 ------------EVLVNGXRVPIVGRVTMDQFMIHLP--CEVPLGTXVTLIGRQGDEYIS 348

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             +VA  SGT NY+++  I  R  + +
Sbjct: 349 ATEVAEYSGTINYEIITTISFRVPRIF 375


>gi|188533687|ref|YP_001907484.1| Alanine racemase, catabolic [Erwinia tasmaniensis Et1/99]
 gi|226711042|sp|B2VJ52|ALR_ERWT9 RecName: Full=Alanine racemase
 gi|188028729|emb|CAO96591.1| Alanine racemase, catabolic [Erwinia tasmaniensis Et1/99]
          Length = 356

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 22/368 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL+ N       +G +R  +VVK NAYG G +++  +L       F + 
Sbjct: 2   SRPIVATINRAALRQNLAIARQAAGGSRLWSVVKANAYGHGIDRVWQSLAE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++EE + LR    +  I +L G   P   +I+    L   + S  Q+   ++        
Sbjct: 60  NLEEAILLRERGWKKPILLLEGFFHPADLEILDRYRLTTSVHSNWQIKALAEAKLSA-PL 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++++G NRLG   ++  +      + K      +++H A A+       +  L+R 
Sbjct: 119 DIYLKMNSGMNRLGFQPEQVNNAWQKLRSLKNVGELTLMAHFADAESTEG--VAEPLKRI 176

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTA 238
               +       SLA+S+  L  P  H    RPGI LYG +            +Q V+T 
Sbjct: 177 EQ-AAEGLECPRSLANSAATLWHPQTHHDWVRPGIILYGASPSGRWQDIAGSGLQPVMTL 235

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + II +++  AG  V YG + + +    I V A GYADGYP                G 
Sbjct: 236 TSEIIGVQQLAAGSCVGYGSRYRASGSQRIGVVACGYADGYPRHA-----------PTGT 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G M  ++G ++MDM   D+T      +G  ++++G  +K+DDVA ASGT  Y+L+
Sbjct: 285 PIRVDGEMTQVVGAVSMDMITVDLTPCPQAGIGSQVELWGNSVKIDDVASASGTVGYELM 344

Query: 359 VRIGTRYA 366
             +  R  
Sbjct: 345 CALAQRVP 352


>gi|86357070|ref|YP_468962.1| alanine racemase protein [Rhizobium etli CFN 42]
 gi|86281172|gb|ABC90235.1| alanine racemase protein [Rhizobium etli CFN 42]
          Length = 333

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 161/328 (49%), Positives = 218/328 (66%), Gaps = 2/328 (0%)

Query: 44  GCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI 103
           G E    ALY AG +DFFV +V+EGV LRLY P+ARIFVL GI PG E+  FD +L+PVI
Sbjct: 2   GIEDAGEALYLAGARDFFVATVDEGVTLRLYAPEARIFVLSGIWPGTERRFFDNDLVPVI 61

Query: 104 SSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISH 163
           SS  Q  F+  +++    +P AL VDTGFNRLGL + +A+    +          L++SH
Sbjct: 62  SSDEQFAFWMAVLADYGDYPCALHVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSH 121

Query: 164 LACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT 223
           LAC DDPS  +N  QLE FR + + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG 
Sbjct: 122 LACGDDPSHLMNRQQLESFRKVTAAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGE 181

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                ++PM+ V T EARII +R   AGE VSYG   +L RDS +A+ + GYADGY  + 
Sbjct: 182 AVCGVTNPMRPVATTEARIIQVRTVKAGETVSYGRALQLHRDSRLAIVSAGYADGYMRSQ 241

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDI 341
           S        +V  GG+GFI G+ VP+ G+ITMD+T+FD+TD     +  GDY+++FG ++
Sbjct: 242 SSGGVPLRQAVPQGGQGFIAGHKVPVAGRITMDLTIFDVTDLPENAVRAGDYVELFGKNM 301

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            LDDVA A+GT  Y++L  +G R+ + Y
Sbjct: 302 ALDDVARAAGTIGYEILTSMGLRHERRY 329


>gi|269468498|gb|EEZ80156.1| alanine racemase [uncultured SUP05 cluster bacterium]
          Length = 349

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 91/360 (25%), Positives = 158/360 (43%), Gaps = 20/360 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               I  +AL +N   +      ++  ++VK +AYG     + P +  +      V+ + 
Sbjct: 3   ATASISQSALAHNLSVVRQSCSGSKIVSMVKADAYGHHLTLVDPIIDES--DLLAVSELS 60

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  KLR  T +  + +       + +     +   V+    +    + +          +
Sbjct: 61  EAQKLREKTDKPILLLSGVYSQDELQSALALDCHVVVH---EKEQINLIAQTKQRIGVWI 117

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG +RLGL   E  +      N  L  +  ++SH ACAD+     N  QL  F  L 
Sbjct: 118 KIDTGMHRLGLLANEYHECIEAFKNNTLVDVECVMSHFACADEIDHPTNEAQLNEFNQLT 177

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                ++ S+A+S+ IL   N  F   RPGI LYG +        ++ V+   A I+ I+
Sbjct: 178 DDS--VKRSMANSAAILSNKNALFDFVRPGIMLYGISPFGTDESNLKPVMELSAPILSIK 235

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               GE V YG      + + IA+  IGY DGYP                G    I G +
Sbjct: 236 TIQTGESVGYGATWTADKKTNIAIIGIGYGDGYPRHAKN-----------GTPVCINGEI 284

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRY 365
            P++G+++MD+   +I DS++ +VGD + ++G + +  + VA  S T  Y+L+  + +R 
Sbjct: 285 CPLIGRVSMDLICVNI-DSITAKVGDVVTLWGNEKLSAETVATWSDTIGYELVTGVSSRV 343


>gi|313813897|gb|EFS51611.1| alanine racemase [Propionibacterium acnes HL025PA1]
          Length = 375

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPCDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|259500992|ref|ZP_05743894.1| alanine racemase [Lactobacillus iners DSM 13335]
 gi|302190559|ref|ZP_07266813.1| alanine racemase [Lactobacillus iners AB-1]
 gi|259167686|gb|EEW52181.1| alanine racemase [Lactobacillus iners DSM 13335]
          Length = 375

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/386 (20%), Positives = 153/386 (39%), Gaps = 32/386 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   S  + 
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFASLAAENDISLTVGDLDWLKQTSTFL- 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++   +     +  + +H + AD        
Sbjct: 120 SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLSHPEYDVEGMFTHFSTADCHDLEYFD 179

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-------KIN 227
            Q+++F         K       +S+  L        L R GI++YG          +I 
Sbjct: 180 SQVKKFDHFKKMLRIKPKYIHCDNSAASLFNRQVDSDLVRYGIAMYGLNPSSAPHGIEIQ 239

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 240 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 299 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 346 KAVADYANTIHYEIACLLSDRVPREY 371


>gi|16760692|ref|NP_456309.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29141550|ref|NP_804892.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|213162931|ref|ZP_03348641.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213420203|ref|ZP_03353269.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
 gi|213426623|ref|ZP_03359373.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|213648191|ref|ZP_03378244.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
 gi|20137367|sp|Q8Z688|ALR2_SALTI RecName: Full=Alanine racemase, catabolic
 gi|25291652|pir||AC0723 alanine racemase [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16502989|emb|CAD05485.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29137177|gb|AAO68741.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
          Length = 356

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYGLLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|296126374|ref|YP_003633626.1| alanine racemase [Brachyspira murdochii DSM 12563]
 gi|296018190|gb|ADG71427.1| alanine racemase [Brachyspira murdochii DSM 12563]
          Length = 369

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 108/376 (28%), Positives = 183/376 (48%), Gaps = 23/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            +   ++DL+ LKNN   +++++   +   +VK NAYG G  +I+ A    G     V +
Sbjct: 3   NYTIAEVDLSILKNNIEIIHSIANGVKLLNIVKANAYGHGLVEISQASEQFGADALGVAT 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHP 123
           VEEG+K+R    +  I VL+     + +++   +LIP+IS+   L +Y +     G S  
Sbjct: 63  VEEGIKIRESGVKLPIIVLFQHFKQEAELVCRYDLIPIISNDECLEYYDRYLKKYGGSLK 122

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA---DDPSSHVNSVQLE 180
             ++VDTG NR+G   ++ LD      +     +  I +H A A   DD S      Q++
Sbjct: 123 LYIKVDTGLNRMGARAEDVLDLAKKVLSYSTLSIEGINTHYAAADMQDDYSREFTQRQID 182

Query: 181 RFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            F  +I+  K     +      +S+ +L   N +F + R GI LYG T        ++ +
Sbjct: 183 IFNNVITTLKSNGIVINNVHTANSAALLSYKNTYFDMVRAGIILYGYTYDEAYDLGIKPI 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  +++++LIRK   GE +SYG   +  RD+ IAV  IGYADG    LS           
Sbjct: 243 LNLKSKVVLIRKIKKGESISYGMTWRADRDTNIAVVPIGYADGVSRKLSN---------- 292

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLDDVALASGTT 353
              +  I G   P+ G++ MD  + +I +   I+  D + IFG D  +  + +A    + 
Sbjct: 293 -NWEVKINGKYYPLRGRVCMDSIIIEIGND-DIKTEDDVLIFGNDKRLNANTLAKRIDSI 350

Query: 354 NYDLLVRIGTRYAKFY 369
           ++++LV IG R  + Y
Sbjct: 351 SHEVLVNIGDRVTRVY 366


>gi|213026678|ref|ZP_03341125.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
          Length = 356

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 100/367 (27%), Positives = 159/367 (43%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y LL 
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYGLLC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 AVAPRVP 352


>gi|313157382|gb|EFR56805.1| alanine racemase [Alistipes sp. HGB5]
          Length = 792

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 159/371 (42%), Gaps = 22/371 (5%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL A+ +N +     LS   R  A+VK  +YG G  ++A  L + GV    V   +E
Sbjct: 431 LEVDLDAMIHNLNYFRSKLSFGTRLVAMVKAGSYGAGDFEVAQMLQHQGVDYLAVAFADE 490

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PYAL 126
           GV LR       I VL       + +I +     + S      F   +   G S  P  +
Sbjct: 491 GVLLRERGISMPIVVLNADADSFDVMIANRLEPEIYSFHSLGAFADAVTHAGESRYPIHV 550

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
           ++DTG +RLG   QE              + + + SHL CAD P        Q+  +  +
Sbjct: 551 KLDTGMHRLGFVEQEIAQLCATLAATPQVKAASVFSHLNCADMPEEDAYTRAQIALYDRM 610

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +         +    A+S+ I   P   F + R G+ LYG   + N +    +  T + 
Sbjct: 611 SAQLAASLPYPVIRHTANSAAIERFPEAQFDMCRLGLGLYGFGFRHNDALRPVS--TLKT 668

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI+ I++  AG+ V YG   KLTR +  A   IGYADG    L                 
Sbjct: 669 RIVQIKRLPAGDAVGYGRAGKLTRPTTTATIPIGYADGLDRHLGCGRWS----------V 718

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG--PDIKLDDVALASGTTNYDLL 358
            + G   PI+G++ MD  M DITD   ++ GD + +F   P   L+ +A    T +Y+++
Sbjct: 719 LVAGQPAPIIGRVCMDSCMIDITDIPGVKEGDEVSVFSPVPGNDLETMARVLDTISYEIM 778

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 779 TSVSGRVKRIY 789


>gi|297571884|ref|YP_003697658.1| alanine racemase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932231|gb|ADH93039.1| alanine racemase [Arcanobacterium haemolyticum DSM 20595]
          Length = 374

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 99/386 (25%), Positives = 154/386 (39%), Gaps = 33/386 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S    R  I   A   N   +   + +A   A+VK N YG G E IA   + AG+   
Sbjct: 1   MTSQAPARALISRRAFTQNIEVVRKHT-DATLMAIVKANGYGHGVELIAQWAWEAGIDWL 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            +  + E + LR       +           +   + N+   + +   +           
Sbjct: 60  GLAQLNEALTLRQSHTHGHVLAWIFAPGADFQRAIEQNIDLSVGATWAIDEIEAAARACR 119

Query: 121 SHPY-ALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADD-PSSHVN 175
                 ++VDTG  R G  L +             + + Q+  + SHLACADD  S    
Sbjct: 120 RPARIHVKVDTGMTRGGFDLDQLPSVFARVKKLAAEGIIQIVGLWSHLACADDPHSDAAT 179

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---- 226
           ++Q++RF    S  K  E       LA+SSGIL  P  H+ + RPGI LYG +       
Sbjct: 180 ALQVDRFEQARSLAKEAEVEIPFCHLAASSGILWHPETHYDMVRPGIVLYGLSPNPAYAT 239

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++ ++T EA +IL R+   G  +SYG        + +AV  +GYADG     S  
Sbjct: 240 GPELGLEPLMTLEANVILTREVPEGVGISYGHTHITDEPTRLAVVPVGYADGISRRASNA 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
            S             + G   PI G + MD  +    ++     GD   +FGP+    + 
Sbjct: 300 LS-----------VTLNGDQAPICGVVCMDQFVV---NAPHAHAGDTAVLFGPEHKGYLT 345

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKF 368
            D+ A  + T NY++   +G R  + 
Sbjct: 346 ADNWAEKTDTINYEIFCNLGPRIPRI 371


>gi|323127979|gb|ADX25276.1| alanine racemase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 366

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 156/381 (40%), Gaps = 27/381 (7%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +     +++L A+K N  S+        +T AVVK +AYG G  +++ AL    V
Sbjct: 1   MISSFHRPTVARVNLQAIKENVASVQENIPLGVKTYAVVKADAYGHGAVQVSKALLPQ-V 59

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             + V++++E ++LR       I +L  + P + ++     +   ++S+  L    +   
Sbjct: 60  DGYCVSNLDEALQLRQAGIDKEILILGVLLPNELELAITRQVTVTVASLEWLAMAKQEWP 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++D+G  R+GL     +D           ++  I +H A AD+  +     
Sbjct: 120 DLKGLKVHIKIDSGMGRIGLRSVTEVDNLIAGLKSMGAEVEGIFTHFATADEADTVKFEQ 179

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
           QL  F  L+       + +   +S+  L      F   R GI +YG      ++    P+
Sbjct: 180 QLTFFTNLVDQLADKPSLVHASNSATSLWHSETIFNAVRLGIVMYGLNPSGSELALPFPL 239

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +     E+ ++ +++   GE V YG   K      +    IGYADG+   + G       
Sbjct: 240 KEAFNLESVLVHVKEIAPGETVGYGATYKAQTSEYVGTVPIGYADGWTRDMQGFT----- 294

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    ++     I+G+++MD     +  +  +  G  + + G D    I   D+A 
Sbjct: 295 -------VLVERQPCEIIGRVSMDQMTIRLPRAYPL--GTKVTLIGQDQEKVISTTDIAN 345

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T NY++L  +  R  + Y
Sbjct: 346 YRNTINYEVLCLLSDRVPRVY 366


>gi|226952236|ref|ZP_03822700.1| alanine racemase [Acinetobacter sp. ATCC 27244]
 gi|226837074|gb|EEH69457.1| alanine racemase [Acinetobacter sp. ATCC 27244]
          Length = 375

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+ N   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHTQALRQNLELLRTTVPNSKVFAVVKANAYGHGIERVYDAFKT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  +LR       I +L GI  P          L   + S  QL +  + +       
Sbjct: 61  IEEAKRLRALGWTGPILLLEGIFSPQDLFDCAQYQLSFTVHSEHQLEWLQQHIYPAQ-FD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS--SHVNSVQLER 181
             L++++G NRLG   Q+      +            + H + AD           QL  
Sbjct: 120 IFLKMNSGMNRLGFKPQQYRQVWRHLQRLNNVAKITHMMHFSDADGQRFGQAGVDYQLAE 179

Query: 182 FRTLISHYKGIEASLASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHPMQT----VV 236
           F T I    G E S+++S+ IL  P   H    R GI LYG +    +           +
Sbjct: 180 FETHIQDLPG-ERSVSNSAAILRYPTQLHSDYVRGGIMLYGSSPDYPQHSIQDWGLAPTM 238

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + +I I++    E V YG          + + A GYADGY                 
Sbjct: 239 SLRSELIAIQQLKTNESVGYGSSFVAEHAMSVGIVACGYADGYQRI-----------SPT 287

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASG 351
           G    + G     +G+++MDM   D+T   + E+G  + ++G       + +DDVA ASG
Sbjct: 288 GTPILVNGIRTRTIGRVSMDMLAVDLTPVPNAEIGSEVVLWGTSKTGSILPIDDVAAASG 347

Query: 352 TTNYDLLVRIGTRYA 366
           T  Y+L+  +  R  
Sbjct: 348 TVGYELMCGVTARVK 362


>gi|126740432|ref|ZP_01756120.1| alanine racemase [Roseobacter sp. SK209-2-6]
 gi|126718568|gb|EBA15282.1| alanine racemase [Roseobacter sp. SK209-2-6]
          Length = 345

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 188/364 (51%), Gaps = 25/364 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +L I+L AL  NW ++NA++ N  TAAVVK N YGL   ++A AL  AG ++FFV + E
Sbjct: 4   AKLTINLDALVANWRNLNAMT-NCETAAVVKANGYGLDAGRVAKALAQAGARNFFVAAAE 62

Query: 67  EGVKLRLYTPQARIF-VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR          V  G   G  +++ D  L P+++S+ Q+  + + +     H + 
Sbjct: 63  EGVALRRALGAGPGISVFSGHMDGDTRLLKDFQLTPMLNSLEQMLRHFESL---PGHAFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +         L++SHLACAD+P+  +N+ QL+ FR +
Sbjct: 120 VQLDSGMNRLGMEPAEWAAVGEIAL---GQSPVLLMSHLACADEPAHEMNAKQLKTFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            S    +  SLA++ GILLGP YHF L RPGI LYGG   ++       V + +  +I +
Sbjct: 177 TSG-IEVPRSLAATGGILLGPEYHFDLCRPGIGLYGGRPYLDA----LPVASLDLPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AGE V YG      R S IA  A GYADG    L     +                
Sbjct: 232 RDLEAGESVGYGNAWIAKRPSRIATVAAGYADGLQRALMNTGIDTFAGE----------T 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             PI+G+++MD+   D+T    +    ++ +      +D +A A+GT  Y+ L  +G RY
Sbjct: 282 PCPIVGRVSMDLITVDVTALSDVP--SHLSLLNERQGVDILADAAGTIGYEFLTSLGHRY 339

Query: 366 AKFY 369
           A+ Y
Sbjct: 340 ARTY 343


>gi|294648818|ref|ZP_06726275.1| alanine racemase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825310|gb|EFF84056.1| alanine racemase [Acinetobacter haemolyticus ATCC 19194]
          Length = 375

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/375 (25%), Positives = 147/375 (39%), Gaps = 28/375 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+ N   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAIIHTQALRQNLELLRTTVPNSKVFAVVKANAYGHGIERVYDAFKT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  +LR       I +L GI  P          L   + S  QL +  + +       
Sbjct: 61  IEEAKRLRALGWTGPILLLEGIFSPQDLFDCAQYQLSFTVHSEHQLEWLQQHIYPAQ-FD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS--SHVNSVQLER 181
             L++++G NRLG   Q+      +            + H + AD           QL  
Sbjct: 120 IFLKMNSGMNRLGFKPQQYRQVWRHLQRLNNVAKITHMMHFSDADGQRFGQAGVDYQLAE 179

Query: 182 FRTLISHYKGIEASLASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHPMQT----VV 236
           F T I    G E S+++S+ IL  P   H    R GI LYG +    +           +
Sbjct: 180 FETHIQDLPG-ERSVSNSAAILRYPTQLHSDYVRGGIMLYGSSPDYPQHSIQDWGLAPTM 238

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + +I I++    E V YG          + + A GYADGY                 
Sbjct: 239 SLRSELIAIQQLKTNESVGYGSSFVAEHAMSVGIVACGYADGYQRI-----------SPT 287

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASG 351
           G    + G     +G+++MDM   D+T   + E+G  + ++G       + +DDVA ASG
Sbjct: 288 GTPILVNGIRTRTIGRVSMDMLAVDLTPVPNAEIGSEVVLWGTSKTGSILPIDDVAAASG 347

Query: 352 TTNYDLLVRIGTRYA 366
           T  Y+L+  +  R  
Sbjct: 348 TVGYELMCGVTARVK 362


>gi|116075736|ref|ZP_01472995.1| alanine racemase [Synechococcus sp. RS9916]
 gi|116067051|gb|EAU72806.1| alanine racemase [Synechococcus sp. RS9916]
          Length = 410

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 106/380 (27%), Positives = 164/380 (43%), Gaps = 26/380 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   L++   A+++N  ++  L        AVVK + YG G   +A A    G     V
Sbjct: 40  RQRAWLEVSPAAIESNARALRRLLKPTCALMAVVKADGYGHGATTVARAAVQGGAAQLGV 99

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG+ LR    +  I VL     P   +      L+P +SS+ +      L    G 
Sbjct: 100 ATLQEGIDLRRAGLEQPILVLGNLTQPDDLRACLQWQLMPTLSSMREALLCQNLADGSGR 159

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS----SHVNS 176
                L++DTG NRLG + ++A   T          L  I SHLA AD         V  
Sbjct: 160 QFAVQLKLDTGMNRLGCAWEDAPRLTEAIQQLNQLHLCGIYSHLALADGDPEGDGDRVTR 219

Query: 177 VQLERFRTLISH--YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPM 232
           +Q  RF  ++ H         LA+S+G L  P  H  L R G++LYG +   +     P+
Sbjct: 220 LQQTRFNEVLHHLPEHQALHHLANSAGTLRDPGLHHDLVRVGLALYGHSPSPHLDAAVPL 279

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  +  +AR+ LIR+   G  VSYG +    R S +AV  IGYADG    LSG  +    
Sbjct: 280 QPAMGVKARVTLIREVGTGVGVSYGHRFVTQRPSRLAVVGIGYADGVSRCLSGKIT---- 335

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                     +G+ +  +G ITMD  + D TD   ++ GD + + G     +I     + 
Sbjct: 336 -------ALHRGHSLLQVGAITMDQLILDATDHPDLDSGDVVTLLGRDGDQEISPRSWSE 388

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
            S +  +++L     R  + 
Sbjct: 389 LSESIPWEVLCGFKHRLPRV 408


>gi|313765106|gb|EFS36470.1| alanine racemase [Propionibacterium acnes HL013PA1]
          Length = 375

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + + L  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTPLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|309809615|ref|ZP_07703472.1| alanine racemase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871527|ref|ZP_07731620.1| alanine racemase [Lactobacillus iners LEAF 3008A-a]
 gi|308170096|gb|EFO72132.1| alanine racemase [Lactobacillus iners SPIN 2503V10-D]
 gi|311092922|gb|EFQ51273.1| alanine racemase [Lactobacillus iners LEAF 3008A-a]
          Length = 375

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 153/386 (39%), Gaps = 32/386 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   S  + 
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFALLAAENDISLTVGDLDWLKQASTFL- 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++         +  + +H + AD        
Sbjct: 120 SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLAHPEYDVEGMFTHFSTADCHDLEYFD 179

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-------KIN 227
            Q+++F         K       +S+  +     +  L R GI++YG          +I 
Sbjct: 180 SQVKKFDHFKKMLRIKPKYIHCDNSAASIFNRQVNSDLVRYGIAMYGLNPSSAPHGIEIQ 239

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 240 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 299 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 346 KAVADYANTIHYEIACLLSDRVPREY 371


>gi|261879587|ref|ZP_06006014.1| Mur ligase domain protein/alanine racemase [Prevotella bergensis
           DSM 17361]
 gi|270333818|gb|EFA44604.1| Mur ligase domain protein/alanine racemase [Prevotella bergensis
           DSM 17361]
          Length = 825

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 94/371 (25%), Positives = 161/371 (43%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   + L    +   ++K +AYG G  +IA +L +  V    V   +E
Sbjct: 466 LEVNLNAVVDNLNYYRSFLKPETKLVCMIKADAYGAGSVEIAKSLQDHQVDYLAVAVADE 525

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           G  LR     + I ++        K +FD +L P + S   L    K        + P  
Sbjct: 526 GAMLRGNGITSSIMIMNPELSA-FKTMFDNDLEPEVYSFRLLDALVKAAEKEGITNFPVH 584

Query: 126 LQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFR 183
           +++DTG +RLG   + +         ++       + SH   AD D     +++Q ERF 
Sbjct: 585 IKLDTGMHRLGFDPEKDLDKLIEKLQHQNAVIPRSVFSHFVGADSDDFDSFSALQFERFD 644

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P +   + R G+ LYG   + N+     +  T 
Sbjct: 645 RASKRLQQAFEHKILRHMDNSAGIEHFPGWQMDMCRLGLGLYGVNSRNNEIINNVS--TL 702

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++ I+ +R+  A E V Y  + KL RDS+IA   IGYADG    L              G
Sbjct: 703 KSTILQLRRVPADETVGYSRKGKLMRDSVIAAIPIGYADGLNRHLGNRR----------G 752

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ + D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 753 YCLVNGCKAEYVGNICMDVALVDVTGI-DCKEGDTVEIFGDHLPVTVLSKILDTIPYEVL 811

Query: 359 VRIGTRYAKFY 369
             + +R  + Y
Sbjct: 812 TSVSSRVKRIY 822


>gi|153853243|ref|ZP_01994652.1| hypothetical protein DORLON_00637 [Dorea longicatena DSM 13814]
 gi|149754029|gb|EDM63960.1| hypothetical protein DORLON_00637 [Dorea longicatena DSM 13814]
          Length = 366

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 82/361 (22%), Positives = 150/361 (41%), Gaps = 26/361 (7%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
             +  + +  AV+K + YG G  +IA  L     +  + V +++E + L+    +  + V
Sbjct: 4   KNIQKDTQMMAVIKMDGYGHGAVQIAKLLEPKDYIWGYAVATLDEAILLKDACLKKPVLV 63

Query: 83  LYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSL-Q 140
           L  I P Q   +    +   + S            + G      +++DTG  RLG  + +
Sbjct: 64  LGCIFPDQWDTMIRNEVRMTVYSYEMAKEVSELAEAMGCKVYVHIKLDTGMARLGFQITE 123

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGI-----EAS 195
           E  +            +  + +H + +D+      + QL+++  +    K          
Sbjct: 124 ENAEEIAKISKLPNLVMEGMFTHFSKSDEADKTFTNEQLDKYLWMKEELKKRGVTFQYYH 183

Query: 196 LASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---PMQTVVTAEARIILIRKALAGE 252
            ++S+GI+     +  + R GI+ YG            P++  +   + +  ++    G+
Sbjct: 184 CSNSAGIIDLKEANMDIVRAGITTYGMYPSDEVEKERVPLKPAMELISHVAHVKWLTEGK 243

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            VSYGG    TR + +A   +GY DGYP +LS             G   I G   PI+G+
Sbjct: 244 PVSYGGTYVTTRPTKVATIPVGYGDGYPRSLSN-----------KGYVLIHGQKAPIIGR 292

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
           + MD  M D+T    +E GD + IFG D    + +D +   SG  NY+ +  +  R  + 
Sbjct: 293 VCMDQFMVDVTAIEDVEFGDKVVIFGRDGKEFLSVDTLGELSGRFNYEFVCVLNKRIPRE 352

Query: 369 Y 369
           Y
Sbjct: 353 Y 353


>gi|50955527|ref|YP_062815.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952009|gb|AAT89710.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 372

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 25/379 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S  F  L +DL A+  N   +   +G     AVVK +AYG G  + A A    G     V
Sbjct: 2   SAPFRELVVDLDAVSANVVRLRERAGTPHLMAVVKADAYGHGAVESACAALAGGADWLGV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             + E  +LR    +A +                  +   +SS+      +     G   
Sbjct: 62  ADLSEASQLRAAGIEAPLLAWLHDPDEDFVAAIAAGVDIGVSSL-AHLEAAAAAGGGSPA 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNK-----KLGQLSLIISHLACADDPSSHVNSV 177
              L+++TG +R GL  ++       +         + +        A   +  + + + 
Sbjct: 121 FVQLKLETGLSRNGLPEEQWEAVFARAHELERSGRIVVRGVFSHLSNASPAEDRAAIAAY 180

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQT 234
           +    R   +        +A+S+  +  P   F L R G+++YG +     S     ++ 
Sbjct: 181 ERGLARAEAAGLAPELRHIAASAAAISLPEARFTLVRLGLAIYGLSPFGAASATELGLRP 240

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T  AR+  +R+  AG+ VSY    +  R++ +A+  +GY DG P   S L        
Sbjct: 241 ALTLRARVAAVRRVPAGKGVSYDYTYRTERETTLALVPVGYGDGLPRHASNL-------- 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   I G    + G+I MD  + D+ D+  + VGD + +FG         DD A A+
Sbjct: 293 ---GPVSIGGERFRVSGRIAMDQFVVDVGDAP-VAVGDEVVLFGDPARGVPGADDWAAAA 348

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T NY+++ R+G R  + +
Sbjct: 349 ETINYEIVTRLGGRLRRTF 367


>gi|227818945|ref|YP_002822916.1| alanine racemase, catabolic [Sinorhizobium fredii NGR234]
 gi|227337944|gb|ACP22163.1| alanine racemase, catabolic [Sinorhizobium fredii NGR234]
          Length = 377

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 134/365 (36%), Positives = 197/365 (53%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL+ N+  ++A    A  AAVVK +AYGLG E+++ AL+  G + FFV  + E 
Sbjct: 23  LTIDLAALQRNYRKLSAAVAPASAAAVVKADAYGLGAEQVSKALHAQGCRHFFVAHLPEA 82

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           +KLR   P    IFVL G+ PG E    + +++PV++S+ Q   +S      G   P  L
Sbjct: 83  LKLRPLLPNDTHIFVLNGLQPGAEITCTNADVVPVLNSLEQFRRWSFTAEKLGRVFPAVL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLG+  QE              ++  I+SH+ACAD+     N+ QL   R + 
Sbjct: 143 QFDTGMSRLGVPPQERTALAAELKGCGNLEILFIMSHVACADEADKKQNADQLAEMRVIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + + G++   A+S G+ LG +YH  L RPGI+LYGG     + +PM+ VV  E  +I  R
Sbjct: 203 AEFAGLDVCFANSGGVFLGGDYHGVLARPGIALYGGAPTAGRYNPMEPVVRLEVAVIQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG    +  + +A  A GYADG P +LS             G  F  G  
Sbjct: 263 TVPAGTRVGYGGAHVTSAKTRLATIAAGYADGLPRSLSDC-----------GAVFYDGVR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    DIT      + +G  +++ GP   L+DVA A+GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSITVDITALPEGTLSLGSLVEVLGPHQTLEDVAEAAGTISYEILTSLGRR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YERRY 376


>gi|88807916|ref|ZP_01123427.1| alanine racemase [Synechococcus sp. WH 7805]
 gi|88787955|gb|EAR19111.1| alanine racemase [Synechococcus sp. WH 7805]
          Length = 393

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 109/379 (28%), Positives = 171/379 (45%), Gaps = 26/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   +++   A++ N  ++   L       AVVK + YG G E +A A    G     V
Sbjct: 23  RQRAWMEVSAQAVEKNARALKGILKPGCALMAVVKADGYGHGAETVARAAICGGAASLGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG++LR    +  + VL   I     +      L+P +SS+ +      L S  G 
Sbjct: 83  ATLQEGIELRRAGLELPVLVLGNLIQAEDLRACLHWQLMPTLSSMREALLCQNLASGSGR 142

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS----SHVNS 176
                L++DTG  RLG   Q+    T          L  + SHLA AD         +  
Sbjct: 143 RFSVQLKLDTGMTRLGCDWQDGSRLTAAIQQLDHLMLRGVYSHLAMADGGPEGDAERITR 202

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPM 232
           +Q ERF  +      + ++  LA+S+G L  P+ H    R G++LYG +    +N+S  +
Sbjct: 203 LQQERFDAVTRSLRSEALQLHLANSAGTLRDPSLHHDQVRVGLALYGHSPSQHLNQSVHL 262

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +  +AR+ LIR   AG  VSYG +   +R S +AV  IGYADG   +LSG  S    
Sbjct: 263 EPAMGVKARVSLIRVVPAGVGVSYGHRFITSRPSRLAVVGIGYADGVSRSLSGQIS---- 318

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                      G  +P +G ITMD  + D TD  +++VGD + + G D    I   + A 
Sbjct: 319 -------VLHAGQRLPQVGAITMDQLLVDATDHPALDVGDVVTLLGSDGEEVIHPLEWAE 371

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            S T  +++L     R  +
Sbjct: 372 LSHTIPWEVLCSFKHRLPR 390


>gi|242241483|ref|ZP_04795928.1| alanine racemase [Staphylococcus epidermidis W23144]
 gi|242235026|gb|EES37337.1| alanine racemase [Staphylococcus epidermidis W23144]
          Length = 384

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 158/382 (41%), Gaps = 30/382 (7%)

Query: 3   SNEFLRLK---IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S +F R     ++L A+  N+ + N L  N    +V+K N YGLG  KIA  L   G   
Sbjct: 4   SEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATF 63

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ--LTFYSKLMS 117
           F V +++E ++LR++   A++ VL  +     +      +   + S      T       
Sbjct: 64  FAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDD 123

Query: 118 CGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +    +++DTG  R+G+  + E  +       +       + +H A AD+P S +N 
Sbjct: 124 NQKNLWLHVKLDTGMGRIGMKDIYEYKEVVDLINKRNHLVFEGVYTHFASADEPGSSMN- 182

Query: 177 VQLERFRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHP 231
            Q   F+ +++   K I     +S+G LL         R GISLYG         N    
Sbjct: 183 EQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVH 242

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      +  + ++   AGE VSYG       +  IA+  IGYADGY  ++        
Sbjct: 243 LRPSAQLVSETVQVKTLKAGETVSYGRTYTAAEEMTIAILPIGYADGYLRSMQ------- 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                G    + G    ++G+I MD  +  +     ++ G+ + +           + VA
Sbjct: 296 -----GAFVNVNGNQCEVIGRICMDQMIVKVP--SHVKTGEKVILMDNHVDSPQSAEAVA 348

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
              GT NY++L  +  R  + Y
Sbjct: 349 NKQGTINYEVLCNLSRRLPRIY 370


>gi|169824891|ref|YP_001692502.1| alanine racemase [Finegoldia magna ATCC 29328]
 gi|167831696|dbj|BAG08612.1| alanine racemase [Finegoldia magna ATCC 29328]
          Length = 391

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 153/378 (40%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LK+DL  LK+N+  +  +S   +  AVVK NAYG G   I   L   G+  F V+++ E 
Sbjct: 8   LKVDLDKLKHNYKEIKNISNLVKMCAVVKANAYGQGAAFITKELEYLGIDYFAVSNINEA 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQ 127
           ++LR       I +L  I     ++    N+   +         + +           ++
Sbjct: 68  LELRKNGIFKPIMILGYISNENIEVAIKNNIELTVYDYDTAVEINNVAKSLNKICKVHIK 127

Query: 128 VDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           +DTG  RLG  +     + L+     +      L  I SH + AD         Q   + 
Sbjct: 128 IDTGMTRLGFQVRLDRDKCLEEIFKIYKMDNVVLQGIYSHFSDADSEDYSYTKEQYNTYI 187

Query: 184 TLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTV 235
             +   +     +     ++    +   Y   + R GI LYG         N    ++ +
Sbjct: 188 GFMIDVENRGITVPIKHIANDAGAIIHGYFLDMIRCGIGLYGYHASDYVRENSRLNLEEI 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +    + +I+    G  + YG       ++++A A IGYADGYPL LS           
Sbjct: 248 SSLYTTVSMIKTVPKGTDIGYGRTFTTNSETVVATATIGYADGYPLELSN---------- 297

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I G    ILGK+ MD  M D+T    ++VGD + +FG D    I L  +A  + 
Sbjct: 298 -KAYVIINGKKAKILGKVCMDQIMIDVTYIRDVKVGDKVLLFGKDDMGEISLYKLAEMAN 356

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+LL R+  R  + Y
Sbjct: 357 TNVYELLCRVTMRIPRIY 374


>gi|315653948|ref|ZP_07906864.1| alanine racemase [Lactobacillus iners ATCC 55195]
 gi|315488644|gb|EFU78290.1| alanine racemase [Lactobacillus iners ATCC 55195]
          Length = 375

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 152/386 (39%), Gaps = 32/386 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   S  + 
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFALLAAENDISLTVGDLDWLKQASTFL- 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++         +  + +H + AD        
Sbjct: 120 SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLAHPEYDVEGMFTHFSTADCHDLEYFD 179

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-------KIN 227
            Q+++F         K       +S+  +        L R GI++YG          +I 
Sbjct: 180 SQVKKFDHFKKMLRIKPKYIHCDNSAASIFNRQVDSDLVRYGIAMYGLNPSSAPHGIEIQ 239

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 240 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 299 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 346 KAVADYANTIHYEIACLLSDRVPREY 371


>gi|317495370|ref|ZP_07953739.1| alanine racemase [Gemella moribillum M424]
 gi|316914429|gb|EFV35906.1| alanine racemase [Gemella moribillum M424]
          Length = 375

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 173/382 (45%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++    L+++L A+ NN+  ++ L+G   + AVVK ++YGLG + IA  LY  GV+ F
Sbjct: 1   MINDRPTHLRVNLDAVLNNYRKLDKLNGLKTSLAVVKADSYGLGAKVIADYLYKNGVRHF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCG 119
            V ++EE ++L+ Y  ++ + VL   +P   K   + N+ +   S         +L    
Sbjct: 61  AVATLEEALELKKYIKESLLLVLGVTNPKNVKYAVENNISLTCPSKEWFEEALKELEKID 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 ++++TG NR+G S  E L   HN F  +  +   I SH + AD   +  +  Q 
Sbjct: 121 GKLKLHIKLETGMNRIGTSEVEELMEIHNLFYSEKVEFEGIFSHYSNADGEDNEYDDYQT 180

Query: 180 ERFRTLIS--HYKGIEASLASSSGILLGPN--YHFQLTRPGISLYGGTDKIN----KSHP 231
             F +L+     K     + +S+G +   +      L+R GI+LYG     N        
Sbjct: 181 ANFNSLVKLFKLKPKYIHIENSAGTIKYSDRNDICNLSRIGIALYGCYPSSNIERLNKLS 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V +  +++  ++K   G  + YG   +   D  IA   IGYADG      G      
Sbjct: 241 LEPVASLVSKVTHVKKVPKGTKIGYGISYETQEDEYIATIPIGYADGLLRRAQGFKLN-- 298

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                     + G    I+G++ MD  M   ++  +I+VGD + +FG      I +DD A
Sbjct: 299 ----------VAGEECEIVGRVCMDQLMVRCSE--NIKVGDDVLVFGEYNNQKISVDDFA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   I  R  + Y
Sbjct: 347 DYQKTISYEIFCCINRRVPRKY 368


>gi|313833423|gb|EFS71137.1| alanine racemase [Propionibacterium acnes HL056PA1]
          Length = 375

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAESTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|116513509|ref|YP_812415.1| alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|122275721|sp|Q04C45|ALR_LACDB RecName: Full=Alanine racemase
 gi|116092824|gb|ABJ57977.1| Alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 376

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 86/387 (22%), Positives = 151/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N     A L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKAHLKPGQKLFCVVKANAYGHGAARLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRAQIVKPILVLGLQPAEESALAAANDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
             G+     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++ IL   +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESLLTVKPKWIHVDNTAAILFDKDVASDIVRFGIGLYGLNPSSAPGSRDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALEPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|124024027|ref|YP_001018334.1| alanine racemase [Prochlorococcus marinus str. MIT 9303]
 gi|123964313|gb|ABM79069.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9303]
          Length = 398

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 174/381 (45%), Gaps = 28/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++++  A++ N  S+   L  +    AVVK + YG G   +A A    G +   V
Sbjct: 26  RQRAWVEVNPAAVEANCRSLRRHLCESCALMAVVKADGYGHGAVTVARAALQGGAKSLGV 85

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG++LR     A + VL    H    K      L+P +SS+ ++     L    G 
Sbjct: 86  ATLQEGIELRQAGHNAPVLVLGNLTHSEDLKACLHWQLMPTLSSMREVLLCQNLADGSGR 145

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP----SSHVNS 176
                L++DTG  RLG  L+EA        +    +L  I SHLA AD      ++ V  
Sbjct: 146 QFRIQLKIDTGMTRLGCELKEAPRLVEAIDHLNQLELKGIYSHLALADGDLQGEAAMVTD 205

Query: 177 VQLERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SH 230
            Q + F  ++      + G    LA+S+G L     H+ + R G++LYG +  +      
Sbjct: 206 QQQQHFEAVLRTLPEQHNGFMRHLANSAGTLRDRGLHYDMVRVGLALYGHSPNLQLQGKV 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +Q  ++ +AR+ LIR   AG  VSYG +    R S +AV  IGYADG   +LSG  S  
Sbjct: 266 DLQPALSVKARVTLIRDVPAGVGVSYGHRFTTRRPSRLAVVGIGYADGVSRSLSGQISAI 325

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
           +           +G ++P +G ITMD  + D T+   +EVG  + + G D    I     
Sbjct: 326 A-----------EGQLLPQVGAITMDQLVLDATNHPDLEVGSIVTLLGQDGDACITPQQW 374

Query: 347 ALASGTTNYDLLVRIGTRYAK 367
           +  SG+  +++L     R  +
Sbjct: 375 SDLSGSIPWEVLCSFKHRLPR 395


>gi|254465901|ref|ZP_05079312.1| alanine racemase [Rhodobacterales bacterium Y4I]
 gi|206686809|gb|EDZ47291.1| alanine racemase [Rhodobacterales bacterium Y4I]
          Length = 345

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 130/364 (35%), Positives = 186/364 (51%), Gaps = 25/364 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL I+L AL  NW +++AL+ N  TAAVVK N YGL   ++  AL  AG ++FFV + E
Sbjct: 4   ARLTINLDALVTNWRNLDALT-NCETAAVVKANGYGLDAGRVGKALARAGARNFFVAAAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG  LR    P   I V  G   G  K++ D  L P+++S+ Q+  + + +     HP+ 
Sbjct: 63  EGGALRRALGPGPGISVFSGHMEGDAKLLKDFQLTPMLNSLDQMLRHFETL---PGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +         L++SHLACAD+P   +N+ QL  FR L
Sbjct: 120 VQLDSGMNRLGMEPGEWAAVAEIAL---GQNPVLLMSHLACADEPGHGMNARQLHTFREL 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 I  SLA++ G+LLG +YHF L RPGI LYGG    +       VV  +  +I +
Sbjct: 177 TDG-LDIPRSLAATGGMLLGSDYHFDLCRPGIGLYGGLPFKDA----LPVVQLDLPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE   YG      R S IA  A GYADG    +             G + +    
Sbjct: 232 RDMEPGESAGYGNAWVAKRPSRIATVAAGYADGLHRAMG----------QGGIQVYAGDT 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+++MD+   D+TD    EV D + I      +D +A A+GT  Y++L   G R 
Sbjct: 282 PCPVVGRVSMDLITVDVTDL--AEVPDMLAILNERQTVDMLADAAGTIGYEILTSSGHRS 339

Query: 366 AKFY 369
           A+ Y
Sbjct: 340 ARTY 343


>gi|86134588|ref|ZP_01053170.1| Alanine racemase [Polaribacter sp. MED152]
 gi|85821451|gb|EAQ42598.1| Alanine racemase [Polaribacter sp. MED152]
          Length = 366

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 23/376 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+++  + L+ID  AL +N +     L+ N +  AVVK   YG     +A  L +  V  
Sbjct: 1   MNNHVSV-LEIDSKALVHNLNYFKNKLNQNTKILAVVKAFGYGSDGVLVADFLKDK-VDY 58

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V    EG+ LR    +  I VL+       + I D  L P + +      + +L    
Sbjct: 59  FAVAYAHEGIALREANIKTPILVLHP-QIATLQDIIDYRLEPNLYNFKIFHAFLELADTI 117

Query: 120 V--SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
              ++P  ++ +TG NRLG    +              ++  + SHLA ++D       +
Sbjct: 118 PLMNYPVHIKFNTGLNRLGFWHTDIPKIISELKETNHIKVQSLFSHLAASEDLEEKDFTN 177

Query: 177 VQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            QL  F  ++  +           + ++SG++      F + R GI LYG  +   ++  
Sbjct: 178 NQLNSFAYIVQQFYKHLSYEPMLHILNTSGVVNYAKAQFDMVRVGIGLYGFGNDDEETKQ 237

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++     ++ I  I     GE V Y       + S  A   +G+ADG    L        
Sbjct: 238 LKNTHNLKSIISQIHLIEPGETVGYNRAFVAKKPSKSATIPVGHADGLSRKLGNEA---- 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G   I      I+G + MDM M D+T       GD + IF     L  +A AS 
Sbjct: 294 ------GYVLINNQKAKIIGNVCMDMIMVDVTKI-DCNEGDEVIIFNSQDMLKHIADASE 346

Query: 352 TTNYDLLVRIGTRYAK 367
           T  Y+ L  I  R  K
Sbjct: 347 TIVYETLTSISPRVKK 362


>gi|309803757|ref|ZP_07697843.1| alanine racemase [Lactobacillus iners LactinV 11V1-d]
 gi|309804662|ref|ZP_07698727.1| alanine racemase [Lactobacillus iners LactinV 09V1-c]
 gi|312872507|ref|ZP_07732575.1| alanine racemase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874316|ref|ZP_07734348.1| alanine racemase [Lactobacillus iners LEAF 2052A-d]
 gi|325912385|ref|ZP_08174780.1| alanine racemase [Lactobacillus iners UPII 143-D]
 gi|329920529|ref|ZP_08277261.1| alanine racemase [Lactobacillus iners SPIN 1401G]
 gi|308164166|gb|EFO66427.1| alanine racemase [Lactobacillus iners LactinV 11V1-d]
 gi|308166054|gb|EFO68272.1| alanine racemase [Lactobacillus iners LactinV 09V1-c]
 gi|311090189|gb|EFQ48601.1| alanine racemase [Lactobacillus iners LEAF 2052A-d]
 gi|311091869|gb|EFQ50245.1| alanine racemase [Lactobacillus iners LEAF 2062A-h1]
 gi|325475727|gb|EGC78898.1| alanine racemase [Lactobacillus iners UPII 143-D]
 gi|328936205|gb|EGG32658.1| alanine racemase [Lactobacillus iners SPIN 1401G]
          Length = 375

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 153/386 (39%), Gaps = 32/386 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   S  + 
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFASLAAENDISLTVGDLDWLKKTSTFL- 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++   +     +  + +H + AD        
Sbjct: 120 SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLSHPEYDVEGMFTHFSTADCHDLEYFD 179

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-------KIN 227
            Q+++F         K       +S+  +        L R GI++YG          +I 
Sbjct: 180 SQVKKFDHFKKMLRIKPKYIHCDNSAASIFNRQVDSDLVRYGIAMYGLNPSSAPHGIEIQ 239

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 240 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 299 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 346 KAVADYANTIHYEIACLLSDRVPREY 371


>gi|209518012|ref|ZP_03266843.1| alanine racemase [Burkholderia sp. H160]
 gi|209501516|gb|EEA01541.1| alanine racemase [Burkholderia sp. H160]
          Length = 356

 Score =  253 bits (646), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 93/348 (26%), Positives = 145/348 (41%), Gaps = 22/348 (6%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
              +  ++  AVVK NAYG G  +  P L       F +  +EE VKLR       I +L
Sbjct: 22  RRHAPKSKIWAVVKANAYGHGLARAFPGLRA--TDGFGLLDLEEAVKLRELGWAGPILLL 79

Query: 84  YGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEA 142
            G   P    +I   +L   + S  QL                L+++TG NRLG ++++ 
Sbjct: 80  EGFFRPTDIDVIDRYSLTTALHSDEQLRMLEM-ARLSKPVNIQLKMNTGMNRLGYTVEKF 138

Query: 143 LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGI 202
                 +   +      +++H + AD       + Q+E F        G   SL++S+  
Sbjct: 139 RAAWERARACQGVGQITLMTHFSDADGERGI--AHQMEAFERGAQGIAGAR-SLSNSAAT 195

Query: 203 LLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGG 258
           L  P  HF   RPGI LYG +        +   +Q  +T  + +I ++    G  V YG 
Sbjct: 196 LWHPQAHFDWVRPGIMLYGASPSGVTAAIEGTGLQPAMTLTSELIAVQTLGEGSSVGYGS 255

Query: 259 QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMT 318
                    I V A GYADGYP                G    + G    I+G+++MDM 
Sbjct: 256 TFTARGSMRIGVVACGYADGYPR-----------VAPEGTPVIVDGVRTRIVGRVSMDML 304

Query: 319 MFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
             D+T   +  VG  ++++G  + +DDVA   GT  Y+L+  +  R  
Sbjct: 305 TVDLTPVPTANVGSRVELWGTALPIDDVAQVCGTIGYELMCAVAPRVP 352


>gi|86749577|ref|YP_486073.1| alanine racemase [Rhodopseudomonas palustris HaA2]
 gi|86572605|gb|ABD07162.1| alanine racemase [Rhodopseudomonas palustris HaA2]
          Length = 423

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 126/364 (34%), Positives = 181/364 (49%), Gaps = 10/364 (2%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW  +   +  A  AAVVK +AYG G   +  AL  AG + FFV ++ E 
Sbjct: 46  LTIDLDAIVANWRKLEKTAVPAEAAAVVKGDAYGCGIAPVTKALVAAGCKTFFVATLAEA 105

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQ 127
             +R   P A I+VL G            N  PVI  + +L  +         S   A+ 
Sbjct: 106 AAVRATAPDAAIYVLDGFFQSTGDEFARLNCRPVIGDLYELAEWDVYCRRTQWSGGAAIH 165

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL++ EA              ++L+ISHLA A+  +  +N+ Q+  FR + S
Sbjct: 166 IDTGMNRLGLTISEAQGIVPRIAT-GDHGITLVISHLAAAEALNHPMNARQVTAFREIAS 224

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            + G+ ASL++SSGI L P + F + RPG +LYG        +PMQ VV  +ARI+ +R 
Sbjct: 225 LFTGVPASLSASSGIFLDPQFAFDMVRPGAALYGINPTPEADNPMQPVVDLKARILQVRS 284

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G+ V YGG     R + IAV + GYADGY       D         G    I G   
Sbjct: 285 VERGDSVGYGGTWTARRPTKIAVLSAGYADGYFRAAGSNDGTR------GADVIIAGQRC 338

Query: 308 PILGKITMDMTMFDITDSL--SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P+ G+I+MD+   D+TD    +   G    + G  I +D++    G+  Y++L  +G RY
Sbjct: 339 PVAGRISMDLLAVDVTDLPANAARRGQMATLIGDGITVDELGHHFGSIGYEVLTSLGRRY 398

Query: 366 AKFY 369
           A+ Y
Sbjct: 399 ARVY 402


>gi|291294605|ref|YP_003506003.1| alanine racemase [Meiothermus ruber DSM 1279]
 gi|290469564|gb|ADD26983.1| alanine racemase [Meiothermus ruber DSM 1279]
          Length = 365

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 86/375 (22%), Positives = 154/375 (41%), Gaps = 32/375 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L+I+L AL +N++ + + +GN +   VVK NAYG G  ++   L   G     V +
Sbjct: 2   RPAWLEINLDALAHNYNLLRSRAGNTQVIGVVKANAYGHGAVEVGKELLRLGAWGLAVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            +E  +LR     ARI ++  +HP Q + + + +LIP IS++      +   + G     
Sbjct: 62  TDEARELRKAGIVARILLMGSLHPQQAREVVELDLIPSISTLESAEALN---ALGKPVTV 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+ DTG  R+G   +EA     +    +   +  I SH A A++        Q+  F+ 
Sbjct: 119 HLEFDTGMGRVGFQPEEAPQVKEHLVRYENLLVQGIYSHFADAEEDVL-WTKEQIAHFKQ 177

Query: 185 LISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
           +   +  G    L +++G      Y     RPGI LYG    +        +    A+  
Sbjct: 178 VQQVFGPGYFYHLCNTAGTFNFGEYGLSAVRPGIGLYGLLPHLGLK----PIARLLAKPT 233

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +++   G  + Y G         IA   +GYADG P  +    +               
Sbjct: 234 QVKELPPGRRIGYSGLYTTQGREWIATLPVGYADGIPRLVFNRATVRYYPDDQP------ 287

Query: 304 GYMVPILGKITMDMTMFDITDSLSI-EVGDYIQ--------IFGPDIKLDDVALASGTTN 354
               P++G+++MD     +   + + +V + +         ++G        A  +GT +
Sbjct: 288 -CTCPVVGRVSMDQITVKLPGPVGLEQVFEVVTPDFDPTSSLWG-------WAELTGTVS 339

Query: 355 YDLLVRIGTRYAKFY 369
           Y+  VR+  R  + Y
Sbjct: 340 YEPAVRLAARLPRVY 354


>gi|260906034|ref|ZP_05914356.1| alanine racemase [Brevibacterium linens BL2]
          Length = 407

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 93/398 (23%), Positives = 154/398 (38%), Gaps = 47/398 (11%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +R +ID+ AL+ N   +      AR   VVK NAYG G + +APAL+ AG +DF V ++
Sbjct: 10  LVRAEIDVAALQANAAVLAKRLAPARLKCVVKANAYGHGIDIVAPALFAAGWRDFCVATI 69

Query: 66  EEGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
            E + LR        I                  +   +S+V  L            +  
Sbjct: 70  NEALHLRELLGDDVTITAWLYGPTTDLDAAVAAGIELGVSTVDSLERLRDAARRTNTTAR 129

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---------------IISHLACAD 168
             L+VDTG  R GL+  +                S                I+SH A AD
Sbjct: 130 LHLKVDTGLGRNGLAPADWKRALVKLKTLDARTESDGADASATTPELEIVGIMSHYAVAD 189

Query: 169 DPSSHVNSVQLERFRT--------------LISHYKGIEASLASSSGILLGPNYHFQLTR 214
           +P     + Q + F +               +   + +E  +A+S   L    +     R
Sbjct: 190 EPERVETAQQTQVFDSAHRELSAVLDGAQGRLGESERLEVHIANSPAALTLSPFPGTSAR 249

Query: 215 PGISLYGGTD---KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
            G+SLYG +    + +K   +   +   +++I ++    G   SYG       D+  A+ 
Sbjct: 250 VGLSLYGLSPLGDQTSKDLGLVPAMRLVSQVINLKDIPTGHGASYGLTFTAAADTRFALV 309

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG 331
             GY DG   + S              +  I+G   P++G+I MD  + ++     + +G
Sbjct: 310 PGGYGDGIARSASN-----------KAEVSIRGTRYPVVGRIAMDQMIVEVGAG-EVAIG 357

Query: 332 DYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRYAKF 368
           D + IFGPD     +    + T NY+++ RI  R  + 
Sbjct: 358 DEVVIFGPDGPSAAEWGEWAETINYEIVTRISERVDRV 395


>gi|315099423|gb|EFT71399.1| alanine racemase [Propionibacterium acnes HL059PA2]
          Length = 375

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAESTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|309808567|ref|ZP_07702463.1| alanine racemase [Lactobacillus iners LactinV 01V1-a]
 gi|312874851|ref|ZP_07734870.1| alanine racemase [Lactobacillus iners LEAF 2053A-b]
 gi|325913186|ref|ZP_08175556.1| alanine racemase [Lactobacillus iners UPII 60-B]
 gi|308168195|gb|EFO70317.1| alanine racemase [Lactobacillus iners LactinV 01V1-a]
 gi|311089596|gb|EFQ48021.1| alanine racemase [Lactobacillus iners LEAF 2053A-b]
 gi|325477607|gb|EGC80749.1| alanine racemase [Lactobacillus iners UPII 60-B]
          Length = 375

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 80/386 (20%), Positives = 153/386 (39%), Gaps = 32/386 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   S  + 
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFASLAAENDISLTVGDLDWLKQTSTFL- 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++   +     +  + +H + AD        
Sbjct: 120 SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLSHPEYDVEGMFTHFSTADCHDLEYFD 179

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-------KIN 227
            Q+++F         K       +S+  +        L R GI++YG          +I 
Sbjct: 180 SQVKKFDHFKKMLRIKPRYIHCDNSAASIFNRQVDSDLVRYGIAMYGLNPSSAPHGIEIQ 239

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 240 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 299 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 345

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 346 KAVADYANTIHYEIACLLSDRVPREY 371


>gi|297205120|ref|ZP_06922516.1| alanine racemase [Lactobacillus jensenii JV-V16]
 gi|297149698|gb|EFH29995.1| alanine racemase [Lactobacillus jensenii JV-V16]
          Length = 375

 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 87/383 (22%), Positives = 148/383 (38%), Gaps = 32/383 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +++DL A+K N  +  A L    +  AVVK NAYG G  K+A      G   F V
Sbjct: 6   HRPAEVEVDLLAIKKNLQAEKAHLKPGQKLFAVVKANAYGHGAVKVAKMAARNGADGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS- 121
             ++E  +LR  +    I VL G+ P  E  I   + I + +   +    + +       
Sbjct: 66  AVLDEAFELRDASIVDPILVL-GVTPANEACIAAAHNISLTAPSLEWLKAADMALAKKDM 124

Query: 122 -HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQL 179
                L +D+G  R+G S  +     +         +   + +H A AD   S     Q+
Sbjct: 125 VLKIHLAIDSGMGRIGFSEDQEFIAANEFLRNSTHFIVEGMFTHFASADSADSSYFDYQI 184

Query: 180 ERFRT--LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----- 232
           +RF     +   K     +A+++  +     H  + R GI LYG     N + P      
Sbjct: 185 KRFNHLKNLLSIKPKWIHVANTASSIFDKQIHSDIVRFGIGLYGLNPSSNPASPDLESKI 244

Query: 233 --QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             +  ++  + +  ++K  +G  + YG       D  I    +GYADG    LSG     
Sbjct: 245 TLKPALSLVSELSFVKKVHSGYGIGYGSTYVADSDQWIGTVPVGYADGIIRKLSGF---- 300

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDV 346
                   K  +     PI+G+I MD  M  + + + +  G  + I+         +   
Sbjct: 301 --------KIKVGDNFCPIVGRICMDQLMVLLPEKMPV--GTKVVIYSNKTEDPNSIKKA 350

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T +Y+L   +  R  + Y
Sbjct: 351 ADYVDTIHYELACLLSDRLPRIY 373


>gi|227549893|ref|ZP_03979942.1| alanine racemase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078039|gb|EEI16002.1| alanine racemase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 362

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 99/374 (26%), Positives = 167/374 (44%), Gaps = 27/374 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S + L  +IDL A+ +N   ++ L+G+A    VVK NAY  G  ++ P +  AG   F
Sbjct: 1   MVSMDLLTARIDLDAIAHNTRILSQLAGSACLMCVVKANAYNHGVSQVVPVMDAAGADAF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
              ++ E  ++R     A+  V +   PGQ+          +   VP +     L+   +
Sbjct: 61  GTATLAEAAEVREL--TAKPVVSWLWVPGQDIPA------GIELGVPSIEHLRWLVDAHI 112

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  ++VDTG +R GL   +      +   +    +  ++SHLA AD+P+   N  Q +
Sbjct: 113 NAPLHIKVDTGMHRSGLVEADWDK-AFSLAVRAGLNVRGLMSHLAVADEPAHPYNDEQAQ 171

Query: 181 RFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            FR  I   +          LA++  +L  P+  F   R GI LYG        H ++  
Sbjct: 172 AFRRAIERARAHGLDVGCNHLANTPSLLSRPDLVFDQVRAGIGLYGLEPIAGAEHGLRPA 231

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  ARI+ ++  +AG+ +SYG       D  +AV   GYADG   +  G          
Sbjct: 232 MTWAARILAVKPLVAGDALSYGLTWSAPADGFVAVVPAGYADGVGRSWQGHL-------- 283

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGP-DIKLDDVALASGTT 353
              +  ++    P +G++ MD  +  + D+   + VGD   IFG   +   ++A   GT 
Sbjct: 284 ---EVAVRARRYPQVGRVCMDQLLIWLGDNPEGVAVGDEAIIFGAGGMSATELAERVGTI 340

Query: 354 NYDLLVRIGTRYAK 367
           NY+++     R  +
Sbjct: 341 NYEIVCSPKGRTVR 354


>gi|218674907|ref|ZP_03524576.1| alanine racemase protein [Rhizobium etli GR56]
          Length = 338

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 119/348 (34%), Positives = 182/348 (52%), Gaps = 15/348 (4%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ-ARIFVLY 84
           +    R  AVVK +AYGLG E++A  LY+ G + FFV    E V+LR    + A+IFVL 
Sbjct: 1   MLAPVRAGAVVKADAYGLGAERVAQTLYDQGCRHFFVAQFVEAVRLRPALAESAQIFVLN 60

Query: 85  GIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQVDTGFNRLGLSLQEAL 143
           G+ PG E    ++ ++PV++S+ Q   + +         P  LQ DTG +RLG   +E  
Sbjct: 61  GLQPGNEVACAESGIVPVLNSLAQWRQWSATARRLKRCLPAVLQFDTGMSRLGFPWEERA 120

Query: 144 DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGIL 203
           +      +    ++  I+SHLACADD  S  N  Q      +   + G + S A+S G+ 
Sbjct: 121 ELAAALRDGANVEILFIMSHLACADDLESSQNGEQFAEMARIADEFPGFDISFANSGGVF 180

Query: 204 LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
           LG  YH  L RPGI+LYGG      ++PM+ VV  +  ++  R   +G  + YGG     
Sbjct: 181 LGDAYHGVLARPGIALYGGAPSAGGTNPMEPVVRLDVAVVQTRTVPSGAKIGYGGTHVTR 240

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
            ++ +A  A GYADG P +L              G  + KG  +PI+G+++MD    DIT
Sbjct: 241 SETRLATIAAGYADGLPRSLGDC-----------GAVYHKGIRLPIVGRVSMDSATVDIT 289

Query: 324 DSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                 + +G  +++ GP+  L+DVA  +GT +Y++L  +G RY + Y
Sbjct: 290 ALPEGALSLGSLVEVLGPNQTLEDVAGDAGTISYEILTGLGDRYDRHY 337


>gi|260219804|emb|CBA26704.1| Alanine racemase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 364

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 87/374 (23%), Positives = 147/374 (39%), Gaps = 29/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL++N       + +AR  AVVK NAYG G E+    L   G     +  
Sbjct: 3   RPIQATIHTQALRHNLEVCRRAAPDARIWAVVKANAYGHGIERAFEGLR--GADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R    +  I +L G+      ++     L   +    Q+   +        H 
Sbjct: 61  LEEAQRVRNLGWRGPILLLEGVFEQRDLELCSRLGLWHTLHCQEQIDMLAIHK-TNEPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG   ++                  +++H + AD P     + Q+  F+
Sbjct: 120 VFLKVNSGMNRLGFQPEQVRSAWTRLNALPQVDEISLMTHFSDADGPKGI--AGQMAVFK 177

Query: 184 TLISHYKGIEASLASSSGILLG--PNYHFQLTRPGISLYGGTDKINKSHPMQT----VVT 237
                  G E ++++S+  L    P       R GI+ YG      +           +T
Sbjct: 178 QATDDLPG-ERTVSNSAATLRHSGPGLVSDWVRAGIATYGSAPDYPEHDIAHWGLQPTMT 236

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A+II  R   AG+ V YG      +   I V A GYADGYP                G
Sbjct: 237 LAAKIIATRALSAGDTVGYGSNFTADKPMRIGVVACGYADGYPRIC-----------PTG 285

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               I G    ++G+++MDM   D+       +G  + ++G       + +D++A  +GT
Sbjct: 286 TPVLINGVRSRVVGRVSMDMITVDLDPVPQAGMGSEVTLWGRAANGAVLPIDEIASTAGT 345

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 346 VGYELMCALAQRVP 359


>gi|139439475|ref|ZP_01772907.1| Hypothetical protein COLAER_01932 [Collinsella aerofaciens ATCC
           25986]
 gi|133775028|gb|EBA38848.1| Hypothetical protein COLAER_01932 [Collinsella aerofaciens ATCC
           25986]
          Length = 381

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 108/384 (28%), Positives = 164/384 (42%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +  ++ID  AL+ N  +   L +   R   VVK +AYG G  + A  +Y+AG   F V 
Sbjct: 8   RWSWVEIDRGALRRNTRAYKNLLNPRQRLCCVVKADAYGHGAVECAKIMYSAGADMFAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSH 122
           +V EGV+LR       I +L          + + +++P +  S   L +    ++ G   
Sbjct: 68  TVNEGVELRQGGITKPILILSEPPIEAIPTLLEFDIMPSVYTSDFALAYGECAVAAGKVG 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            Y L ++TG NR+G+   + LDF       +  Q   + +H A AD+PS     +Q +RF
Sbjct: 128 KYHLAIETGMNRIGVHYTQVLDFVRGINFHRGIQCDGVFTHFATADEPSGWDYKLQCQRF 187

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTV 235
              +   K           A++   +L P+ HF + R G+ LYG        +   +  V
Sbjct: 188 TEAVQAIKDAGFECGIVHCANTPSSMLDPSMHFDMIRAGVGLYGMQPCELSGRVMQLDPV 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++  AR+  +     GE V YG   ++ R    I    IGYADG   TLS          
Sbjct: 248 MSVHARVTRVAHPAMGEGVGYGFTYRVPRTRVQICTLPIGYADGLSRTLSNRMD------ 301

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDI-----TDSLSIEVGDYIQIFGPD----IKLDD 345
                   +G  V  +G I MD  M  I      +    E GD I I G D    I +D+
Sbjct: 302 -----VLYRGERVHQVGNICMDQFMVAIQSNPAHEIPEAEYGDEIIIVGRDGDAEITMDE 356

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   GT NY++    G R  K Y
Sbjct: 357 MARLRGTINYEVACGFGMRLDKVY 380


>gi|72382936|ref|YP_292291.1| alanine racemase [Prochlorococcus marinus str. NATL2A]
 gi|72002786|gb|AAZ58588.1| alanine racemase [Prochlorococcus marinus str. NATL2A]
          Length = 402

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 106/385 (27%), Positives = 161/385 (41%), Gaps = 29/385 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                +++D   ++NN   +    G+     AVVK + YG G E +A +    G     V
Sbjct: 29  RSRAWVEVDSKIIENNARVLKNFIGDDCSLMAVVKADGYGHGAETVAKSALTGGADSLGV 88

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSCGV 120
            ++EEG++LR    + +I +L  +   +E        +    S     +   +   +   
Sbjct: 89  ATLEEGIQLRNAGLKCQILILGNLINSEELYSSFCWDLIPTISGIREAIICNNIAENKNK 148

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-----HVN 175
                L++DTG  RLG +  +  +  +     +   L  I SHLA AD            
Sbjct: 149 KFAIHLKIDTGMTRLGCNCNQFKELINKIDCLENIALEGIYSHLAIADRYLENNTQLSFT 208

Query: 176 SVQLERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKS 229
            +QL RF  ++       K I   LA+S+G L     HF + R G+SLYG          
Sbjct: 209 QIQLNRFEKVLKGLGKRNKFICRHLANSAGTLSDSRLHFDMVRVGLSLYGYFPVNDFKSD 268

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +   +  +AR+ L+R    G  V YG   K  R S +AV AIGYADG   +LSG  S 
Sbjct: 269 LKLSPALKVKARVTLVRDVGKGIGVGYGHFFKTQRASKLAVVAIGYADGVSRSLSGKISA 328

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       I G +VP +G I MD  +FDITD   I+ G  + + G D    I   D
Sbjct: 329 S-----------IDGVLVPQVGAIAMDQMVFDITDKPDIKTGQVLTLLGTDGEVCISPQD 377

Query: 346 VALASGTTNYDLLVRIGTRYAKFYT 370
               SG+  +++L     R  +  T
Sbjct: 378 WCDLSGSIPWEVLCSFRNRLPRVVT 402


>gi|300771865|ref|ZP_07081736.1| Mur ligase domain protein/alanine racemase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300761251|gb|EFK58076.1| Mur ligase domain protein/alanine racemase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 813

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 110/369 (29%), Positives = 163/369 (44%), Gaps = 23/369 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L AL++N +    L     +  A+VK  +YG G  +IA  L    V    V   +E
Sbjct: 457 LEINLNALEHNLNVYRGLVPKEVKMMAMVKAFSYGSGSFEIANLLQFNQVDYLTVAYADE 516

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYAL 126
           GV+LR       I V+       E ++       + S      F S +      + P  +
Sbjct: 517 GVELRNAGITLPIVVMSPDENAFESVVQHNLEPEIYSFRILHAFISFVRIKDLKNFPIHI 576

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQL---ERF 182
           +VDTG +RLG    EA         + + ++    SHLA A +P  +   + Q+   ++F
Sbjct: 577 KVDTGMHRLGFMPDEAEALIDILRQQDVVRVQSAFSHLASAANPQDNAFTAEQILKLDQF 636

Query: 183 RTLISHYKGIE--ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
              +    G      +A++SGI L P+ +F + R GI +YG          +QTV   + 
Sbjct: 637 AKKLQQELGYSFLRHIAATSGIELWPSAYFDMVRLGIGMYGVEAS-RTDLSLQTVGVLKT 695

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  I+   A E V Y     L RDS IA   IGYADGY                  GK 
Sbjct: 696 NVTQIKHIPASETVGYNRHGVLHRDSKIATIKIGYADGYDRRFGNGV----------GKM 745

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G++VP +G I MDM M D+TD   +   D + +F PDI     A + GT  Y+LLV 
Sbjct: 746 LVNGHLVPTVGDICMDMCMLDVTDIA-VSEEDEVVVF-PDITAA--ANSIGTIPYELLVN 801

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 802 ISQRVKRVY 810


>gi|262374558|ref|ZP_06067832.1| alanine racemase [Acinetobacter junii SH205]
 gi|262310554|gb|EEY91644.1| alanine racemase [Acinetobacter junii SH205]
          Length = 367

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 148/374 (39%), Gaps = 26/374 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+ N   +   + +++  AVVK NAYG G E++  AL       F +  
Sbjct: 3   RPITAVIHTQALRQNLEVVRTSAPDSKVFAVVKANAYGHGIERVYDALKT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  +LR       I +L GI  P       +  L   + S  Q+ +  + +       
Sbjct: 61  IDEAKRLRALGWTGPILLLEGIFSPQDLFDCAEYQLSFTVHSEHQVEWIQQHIYPA-QFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q+      +            ++H + AD           QL  
Sbjct: 120 IFLKMNSGMNRLGFKPQQYRKIWQHLQRLNNVSNITHMTHFSDADGERFGQAGVEYQLAE 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVT 237
           F + I    G  +   S++ +      H    R GI LYG +    K       +   ++
Sbjct: 180 FESTIQDLPGERSVSNSAAILRYPSQVHSDYVRGGIMLYGSSPDYPKHSIHDWGLAPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I I++  A E V YG          I + A GYADGY             +   G
Sbjct: 240 LRSELIAIQQLNANESVGYGSSFVAAHAMTIGIVACGYADGYQR-----------TSPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM    +T   + E+G  + ++G       + +DDVA ASGT
Sbjct: 289 TPVLVNGIRTRTIGRVSMDMLAVYLTPVPNAEIGSEVVLWGTSKTGQILSIDDVAAASGT 348

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 349 VGYELMCGVTARVP 362


>gi|238765457|ref|ZP_04626377.1| Alanine racemase, catabolic [Yersinia kristensenii ATCC 33638]
 gi|238696314|gb|EEP89111.1| Alanine racemase, catabolic [Yersinia kristensenii ATCC 33638]
          Length = 355

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 20/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   ++L+AL +N   +   +  A+  +VVK NAYG G  +I   L       F +  
Sbjct: 3   RPISATLNLSALHHNLSLVRQRAKTAKIWSVVKANAYGHGLARIWSGLAA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E + LR       I +L G    Q+ ++ D   +             K          
Sbjct: 61  LNEAILLREQGWHGPILLLEGFFQPQDLVLLDHYRLTTSVHSDWQLEAIKAARLTAPLNI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+ ++G NRLG  + +A      + +        ++SH A AD+        Q  + + 
Sbjct: 121 YLKFNSGMNRLGFPVGQAQAVWQWAKSLSNVGEVTLMSHFANADNSIG--VDEQFTQIQQ 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEA 240
              H         +S+ IL  P  H+   RPGI LYG +   + +      ++ V++  +
Sbjct: 179 ATGHIPAARCFA-NSAAILRNPQTHYDWVRPGIILYGASPSGDMADIAGMGLRPVMSLRS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II ++   AG+ V YGG+ + +    I V A GYADGYP                G   
Sbjct: 238 EIIAVQSLSAGQRVGYGGRYRASGAQRIGVVACGYADGYPRLA-----------PSGTPI 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +   +G I+MDM   D+T     ++G  ++I+G ++ +D VA A+GT  Y+L+  
Sbjct: 287 MVDGILTHTVGAISMDMLTVDLTPCPQAQIGSKVEIWGENVLIDQVAKAAGTVGYELMCA 346

Query: 361 IGTRY 365
           + +R 
Sbjct: 347 LASRV 351


>gi|319893025|ref|YP_004149900.1| Alanine racemase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162721|gb|ADV06264.1| Alanine racemase [Staphylococcus pseudintermedius HKU10-03]
          Length = 382

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +K++L A+  N++++  L  N     VVK NAYGLG  +IA  L   G + F V +
Sbjct: 7   RTTTMKVNLDAITENYYALTKLQPNKTMMPVVKANAYGLGSIQIAQHLSQLGAEFFCVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSCGVSH 122
           ++E ++LR++  + +I +L  I P          +   + S    +            + 
Sbjct: 67  LDEAIELRMHGIKEKILILSSIPPDAINKAIQHRVAVTVPSRAWLEAATAEIDEDNEKTL 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VDTG NRLG+   EA     N  +     +         + D  +    +Q ERF
Sbjct: 127 WLHIKVDTGMNRLGVKDIEAYHDIINFIHAHKNLVFEGAFSHFHSADEDNDSAHMQYERF 186

Query: 183 RTLISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVT 237
             +I          + +S+G L          RPGI+LYG           +  +   V 
Sbjct: 187 EEIIESTEHPTYIHMQNSAGTLRFNPSLCNAFRPGIALYGYYPSTFIEKIATAQLVPAVQ 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++ ++  + GE V YG       D  IA+  IGYADGY  ++             G
Sbjct: 247 LVTEVMEVKSLIKGETVGYGQTYTAPEDMTIALLPIGYADGYLRSMQ------------G 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               I      I+G+++MD T   +    ++++G+ + +          ++ +A    T 
Sbjct: 295 ANVRIGTTECEIVGRVSMDRTAIRVP--ATVQMGEEVILIDDQAHTSQSVESLAAQQQTI 352

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  IG R  + Y
Sbjct: 353 NYEVLCNIGRRVPRVY 368


>gi|194477028|ref|YP_002049207.1| alanine racemase [Paulinella chromatophora]
 gi|171192035|gb|ACB42997.1| alanine racemase [Paulinella chromatophora]
          Length = 395

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 102/383 (26%), Positives = 170/383 (44%), Gaps = 27/383 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H  +   ++I+ +A++ N   ++ L +  ++  AVVK + YG G    A +    G   
Sbjct: 17  LHPRQRAWVEINRSAIEFNTRVLHKLIAPTSQLMAVVKADGYGHGALNAAESAQAGGASS 76

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM--S 117
           + V +++EGV+LR    QA I VL  +   +E        +    S  +     + +   
Sbjct: 77  YGVATLQEGVQLRQGGIQAPILVLGNLIQSEELRACHHWRLMPTISTIREALICETLGSG 136

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVN 175
            G   P  L++DTG  RLG++ +E           K  +++ I SHLA AD  +      
Sbjct: 137 SGRIMPLHLKLDTGMTRLGVNWKEGSRIAKALSELKGIKIAGIYSHLAMADVSNKVETFT 196

Query: 176 SVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
            +Q +RF  ++++            LA+S+G L     HF + R G++LYG       + 
Sbjct: 197 HLQKQRFLEVLNNLDNQNMNFGYRHLANSAGTLHDSGLHFDMVRVGLALYGQVPSSKLTS 256

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +   AR+ LIR+  +G  VSYG     +  S +AV +IGYADG P  LSG   
Sbjct: 257 ITNLKPALQLRARVTLIREVPSGVGVSYGHGHTTSIPSRLAVISIGYADGIPRVLSGQM- 315

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                     +   KG  +  +GKITMD  + D T   S+ VG  + + G      I   
Sbjct: 316 ----------QALFKGQRLQQVGKITMDQLILDCTSVKSLTVGSIVTLLGKSGKHQINTF 365

Query: 345 DVALASGTTNYDLLVRIGTRYAK 367
           D +    T  +++L     R  +
Sbjct: 366 DWSEKCNTIPWEILCGFKHRLPR 388


>gi|119715145|ref|YP_922110.1| alanine racemase [Nocardioides sp. JS614]
 gi|119535806|gb|ABL80423.1| alanine racemase [Nocardioides sp. JS614]
          Length = 378

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 94/388 (24%), Positives = 166/388 (42%), Gaps = 32/388 (8%)

Query: 1   MHSNEFLRLKI--DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M++    R +I  DL A++NN   +  ++G A    VVK + YG G  + A A   AG +
Sbjct: 1   MNAPPVARAEIVVDLAAIRNNVRRLREVTGVAS-MTVVKADGYGHGMLEAARAAREAGSE 59

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMS 117
              V +++E   LR      R+     +           ++     S  +     + + +
Sbjct: 60  WLGVATLDEAAALRAAGDTGRVLTWLTVPGEDYASAIAADVDVTAYSPAELDEIAAGVRA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHV 174
            G      L++DTG +R G ++++  D              +++ I SH AC+D+P    
Sbjct: 120 AGRPARVQLKIDTGLSRGGATVEQWPDLVAAARAGEEAGRWRVTGIWSHFACSDEPDHPA 179

Query: 175 NSVQLERFRT--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKI--- 226
           N+ Q   FR    ++   G+      LA+S+  LL P+  F L R G++ YG        
Sbjct: 180 NAAQETAFRHALEVADRAGLRPEVRHLANSAAGLLRPSARFDLVRFGLASYGLDPAPGHL 239

Query: 227 -NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                 +   +TA A ++L +   AG  VSYG        + + +  +GY DG P     
Sbjct: 240 AEADLGLVPAMTARAVLVLTKPLPAGAGVSYGHTWVADTPTSVGLVPVGYGDGIPRHAGN 299

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DI 341
                        +  + G    + G++ MD  + D+   L +E G  + +FGP    + 
Sbjct: 300 H-----------AQVLVDGKRRAVRGQVCMDQFVVDLGGDL-LEPGHAVVLFGPGTAGEP 347

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + + A A+GT +Y+++ RIG R ++ Y
Sbjct: 348 TVQEWADAAGTISYEIISRIGGRMSRRY 375


>gi|269928988|ref|YP_003321309.1| alanine racemase [Sphaerobacter thermophilus DSM 20745]
 gi|269788345|gb|ACZ40487.1| alanine racemase [Sphaerobacter thermophilus DSM 20745]
          Length = 408

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 144/377 (38%), Gaps = 29/377 (7%)

Query: 11  IDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           IDL A   N   +   L   A   AV+K NAYG G      A   AG     V  +EE +
Sbjct: 20  IDLDAFAGNIAYVRSQLPEGAEVIAVIKANAYGHGLVPCGRAALAAGASRLAVARIEEAL 79

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYALQV 128
            LR     A I VL   +P   +   ++ +   + S   L      +       P  L+V
Sbjct: 80  LLRAAGVVAPILVLSPANPALARQAAESGIALAVGSATGLNRLLDALGDDLPPLPVHLKV 139

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF-----R 183
           DTG +R G+  +  ++       +   ++  + +H A AD     V   Q  RF      
Sbjct: 140 DTGMHRFGVEPEGVVELARALAREPRVRVEGVFTHFATADAADDRVLQEQTRRFAAAVQA 199

Query: 184 TLISHYKGIEASLASSSGILLG----PNYHFQLTRP-GISLYGGTDKINKSH--PMQTVV 236
              +  +     +A+S+ IL G    P     +    G+ LYG           P++ V+
Sbjct: 200 LAAAGLQPPLVHMANSAAILRGVVEIPAPRATIAVRAGLILYGLNPSRELPLPAPIRPVL 259

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
               R+  +     GE +SYG      R    A   IGYADG    LS            
Sbjct: 260 RLVTRVGQVFTVPPGEGISYGWSYIAERPIRCANLPIGYADGLVRLLSNQ---------- 309

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   + G + PI G+I MD T+ ++  +  +  GD   +        +  D  A  +GT
Sbjct: 310 -GWAVVGGAVCPIRGRICMDQTVIEVEAAPDVAEGDEAVLLSDGRDGAMTADQAAALAGT 368

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY+++  +  R  + Y
Sbjct: 369 INYEIVSALAARIPRVY 385


>gi|207859294|ref|YP_002245945.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|206711097|emb|CAR35471.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
          Length = 368

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 106/360 (29%), Positives = 171/360 (47%), Gaps = 15/360 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P    +     + P+++SV Q + + +   +     P  +Q+
Sbjct: 76  LRKILSADAMVVLLNGVMPQAMPLCCAQQITPLLNSVDQVMAWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKEA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 196 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLSILRVQDV 254

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G  + YG     TR   IA  + GYADG P  L                   +G  +P
Sbjct: 255 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPPAGVCWRGVRLP 303

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 304 VLGRVCMDSFMVDASAIMP-TPGDVVEFIGVSQTLEEVAAACDTIPYEIMTRLGGRFRRI 362


>gi|239623709|ref|ZP_04666740.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521740|gb|EEQ61606.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 396

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 158/385 (41%), Gaps = 28/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M     +   I L A+  N  +M A L  +     VVK + YG G   +A    +  V  
Sbjct: 1   MKPYSRVYAAIHLDAVAANMEAMKANLPASTSMIGVVKTDGYGHGAVPVART-IDPYVDG 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
           + V SV+EG+ LR +  +  I VL   H  + + +   ++ P +    +     +   + 
Sbjct: 60  YAVASVDEGIILRRHGIRKMILVLGVTHESRFEDLVQYDIRPAMFRYGEAQKLSAVAAAM 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      L VDTG NR+G+    E+ D  +     +  ++  + +H A AD+       +
Sbjct: 120 GKKANIHLAVDTGMNRIGMKPDQESADMVYRINMLEGIRIEGMFTHFARADEADKTTYGL 179

Query: 178 QLERFRTLISH------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
           Q  ++   +           I     S+  +         + R GIS+YG          
Sbjct: 180 QFGKYNDFVEMLGSRGITIPIRHCSNSAGIVESLGANGLDMVRAGISIYGLYPSDEVGKD 239

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  +   +  ++ I  I+    G+ VSYGG     R   +A   +GY DGYP +LSG   
Sbjct: 240 AVKLTPAMELKSFITYIKTIEPGDAVSYGGTFVADRQMRVATIPVGYGDGYPRSLSGR-- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   I+G    ILG+I MD  M D+T        D + + G D    I ++
Sbjct: 298 ---------GSVLIRGQRARILGRICMDQFMVDVTGIAGAAEDDEVTLIGRDGDGFIAVE 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           ++A A G  +Y+++  IG R  + Y
Sbjct: 349 ELAGAGGGFHYEIICGIGKRVPRVY 373


>gi|262277398|ref|ZP_06055191.1| alanine racemase [alpha proteobacterium HIMB114]
 gi|262224501|gb|EEY74960.1| alanine racemase [alpha proteobacterium HIMB114]
          Length = 359

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 119/365 (32%), Positives = 188/365 (51%), Gaps = 15/365 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCE-KIAPALYNAGVQDFFVTSV 65
             L I+L A+K N+ ++      +     VK ++YGLG   KI   L NAG + FFV ++
Sbjct: 6   PTLDINLNAVKQNYLTIKKFCSKSEICGTVKASSYGLGGHNKIVTTLKNAGCKRFFVANI 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            EG+ +R       I +L G++ G+EKI++  NL PVI+++ QL  +             
Sbjct: 66  NEGIFIRKKFKSIIINILNGLNRGEEKILYKHNLNPVINTISQLKKWLIFTKNKRKDKLV 125

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +  DTG  RLG+   +  +           +  +I+SHLACA D  ++ N  Q ++F  +
Sbjct: 126 IHFDTGMCRLGIQEDQITEVLKLKDQINKFKEVIIMSHLACAGDKKNNYNEKQRKKFEKI 185

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
              + G + SLA+S GI LG  YH+ L RPGI+LYGG+  +N     + VV+ +A II I
Sbjct: 186 RRTFPGYKYSLAASGGIFLGKKYHYDLVRPGINLYGGSKSLNSKI--KHVVSLKAPIIQI 243

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
                GE   Y    K  RDS+ A   +GYADG  + LS             G    K  
Sbjct: 244 NNLKKGETAGYSRTFKAKRDSITATIPMGYADGIGIRLSN-----------KGYVHFKNK 292

Query: 306 MVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            +P++G+++MD+ + DIT   + I+VGD+++++     +D+ A  +GT  Y ++  I  R
Sbjct: 293 KIPMIGRVSMDLIILDITKFKNKIKVGDFVEVYNDKFTIDNFANLTGTIPYRIITCISKR 352

Query: 365 YAKFY 369
           Y + Y
Sbjct: 353 YLRNY 357


>gi|310815865|ref|YP_003963829.1| alanine racemase [Ketogulonicigenium vulgare Y25]
 gi|308754600|gb|ADO42529.1| alanine racemase [Ketogulonicigenium vulgare Y25]
          Length = 345

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 182/362 (50%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW  + A+S  A   AV+K +AYG G  ++  AL  AGV+ FFV   EEG
Sbjct: 6   LTIDLDAIIGNWRKLAAMS-RAEAGAVLKADAYGTGAARVGAALAEAGVRKFFVAVAEEG 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V LR    P   IFVL G       +I   NL PV++S  Q     +        P+A+Q
Sbjct: 65  VALREAVGPAPEIFVLSGHGTTDTALIRQLNLTPVLNSPQQ---LRRQFDALPGRPFAIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG   ++    T            LI+SHLACAD+P   +N+ QL+ F+ +  
Sbjct: 122 LDTGMNRLGFEWEDWAAVTDEVL---GAGPRLIMSHLACADEPDHPMNAYQLDLFKQMTE 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
             + +  SLA++ GILLGP+YHF L RPGI L+G       +      +  +  +I  R 
Sbjct: 179 GMR-VSRSLAATGGILLGPDYHFDLVRPGIGLHGAAPYAQGA----QALQLDLPVIQTRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
            + GE+V YG   +  R + +A  A GYADG    L             G   +      
Sbjct: 234 LIEGEVVGYGNTWQARRPTRVATLAAGYADGVLRVLG-----------AGTNVYSGDIAC 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI+G+I+MD+   DITD  +      + + GP   +DD+A+ + T  Y++L  +  RY++
Sbjct: 283 PIIGRISMDLITVDITDLDADPE--VLTLIGPQQSVDDLAVTAKTIGYEILTSLSPRYSR 340

Query: 368 FY 369
            Y
Sbjct: 341 QY 342


>gi|256852008|ref|ZP_05557395.1| alanine racemase [Lactobacillus jensenii 27-2-CHN]
 gi|260661423|ref|ZP_05862336.1| alanine racemase [Lactobacillus jensenii 115-3-CHN]
 gi|282931888|ref|ZP_06337367.1| alanine racemase [Lactobacillus jensenii 208-1]
 gi|256615420|gb|EEU20610.1| alanine racemase [Lactobacillus jensenii 27-2-CHN]
 gi|260547878|gb|EEX23855.1| alanine racemase [Lactobacillus jensenii 115-3-CHN]
 gi|281303999|gb|EFA96122.1| alanine racemase [Lactobacillus jensenii 208-1]
          Length = 375

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 87/383 (22%), Positives = 148/383 (38%), Gaps = 32/383 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +++DL A+K N  +  A L    +  AVVK NAYG G  K+A      G   F V
Sbjct: 6   HRPAEVEVDLLAIKKNLQAEKAHLKPGQKLFAVVKANAYGHGAVKVAKMAARNGADGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS- 121
             ++E  +LR  +    I VL G+ P  E  I   + I + +   +    + +       
Sbjct: 66  AVLDEAFELRDASIVDPILVL-GVTPANEACIAAAHNISLTAPSLEWLKAADMALAKKDM 124

Query: 122 -HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQL 179
                L +D+G  R+G S  +     +         +   + +H A AD   S     Q+
Sbjct: 125 VLKIHLAIDSGMGRIGFSEDQEFIAANEFLRNSTHFIVEGMFTHFASADSADSSYFDYQV 184

Query: 180 ERFRT--LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----- 232
           +RF     +   K     +A+++  +     H  + R GI LYG     N + P      
Sbjct: 185 KRFNHLKNLLSIKPKWIHVANTASSIFDKQIHSDIVRFGIGLYGLNPSSNPASPDLESKI 244

Query: 233 --QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             +  ++  + +  ++K  +G  + YG       D  I    +GYADG    LSG     
Sbjct: 245 TLKPALSLVSELSFVKKVHSGYGIGYGSTYVADSDQWIGTVPVGYADGIIRKLSGF---- 300

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDV 346
                   K  +     PI+G+I MD  M  + + + +  G  + I+         +   
Sbjct: 301 --------KIKVGDNFCPIVGRICMDQLMVLLPEKMPV--GTKVVIYSNKTEDPNSIKKA 350

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T +Y+L   +  R  + Y
Sbjct: 351 ADYVDTIHYELACLLSDRLPRIY 373


>gi|313835050|gb|EFS72764.1| alanine racemase [Propionibacterium acnes HL037PA2]
 gi|314929020|gb|EFS92851.1| alanine racemase [Propionibacterium acnes HL044PA1]
 gi|314970970|gb|EFT15068.1| alanine racemase [Propionibacterium acnes HL037PA3]
 gi|328905717|gb|EGG25493.1| alanine racemase 1 [Propionibacterium sp. P08]
          Length = 375

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 146/373 (39%), Gaps = 24/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +I+  +          V +V E
Sbjct: 10  AIIDLSAIAANLTEVRKRAGDRKVLFAVKADAYGHGAVEISRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G +L        I  L    P        + +   +     L   S+     GV+    +
Sbjct: 70  GQELVESGITLPILKLSPADPWDTNTAITSGMRLTVVDFDTLDAVSRAAVQLGVTAKVHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   +  ++  + +HL  +D P        +++ F   
Sbjct: 130 AVDSGMGRIGLPPECLAELTAAADCAEGIEVEGVFTHLPISDVPEGDEFTHHEIDTFMNA 189

Query: 186 I----SHYKGIEASLASSSGILLGPNYHFQ-LTRPGISLYGGTDKINKSHPMQTVV-TAE 239
           +    +          ++SG +LG +     + R GI  YG    ++        V +  
Sbjct: 190 VSQVEADRGPFPLVHLANSGAILGHDLGRTSMVRAGIVGYGYDPDLHADRAALHPVLSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ V YG        + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVNPGDTVGYGRTWTARETTKIATIPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I G + PI+G+I MD  M D+    S+ VGD + + G      +  +D+A   GT +Y
Sbjct: 299 VLIGGSVRPIVGRICMDQFMVDLGPDSSVTVGDEVVLIGTQGDEVLSANDMAELLGTISY 358

Query: 356 DLLVRIGTRYAKF 368
           ++   I  R  + 
Sbjct: 359 EITCAISKRVDRR 371


>gi|260072540|gb|ACX30440.1| alanine racemase [uncultured SUP05 cluster bacterium]
          Length = 349

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 91/358 (25%), Positives = 157/358 (43%), Gaps = 20/358 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             I  +AL +N   +      ++  ++VK +AYG     + P +  +      V+ + E 
Sbjct: 5   ASISQSALAHNLSVVRQSCSESKIVSMVKADAYGHHLTLVDPIIDES--DLLAVSELSEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KLR  T +  + +       + +     +   V+    +    + +          +++
Sbjct: 63  QKLREKTDKPILLLSGVYSQDELQSALALDCHVVVH---EKEQINLIAQTKERIGVWIKI 119

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG +RLGL   E  +      N  L  +  ++SH ACAD+     N  QL  F  L   
Sbjct: 120 DTGMHRLGLLANEYHECIEAFKNNTLVDVECVMSHFACADEIDHPTNESQLNEFNQLTDD 179

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
              I+ S+A+S+ IL   +  F   RPGI LYG +        ++ V+   A I+ I+  
Sbjct: 180 S--IKRSMANSAAILSNKDALFDFVRPGIMLYGISPFGTDESDLKPVMELSAPILSIKTI 237

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             GE V YG      + + IA+  IGY DGYP                G    I G + P
Sbjct: 238 QTGESVGYGATWTANKKTNIAIIGIGYGDGYPRHAKN-----------GTPVCINGKLCP 286

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRY 365
           ++G+++MD+   +I DS++ +VGD   ++G + +  + VA  S T  Y+L+  + +R 
Sbjct: 287 LIGRVSMDLICVNI-DSITAKVGDIATLWGNEKLSAETVATWSDTIGYELVTGVSSRV 343


>gi|323974227|gb|EGB69357.1| alanine racemase domain-containing protein [Escherichia coli
           TW10509]
          Length = 355

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 110/356 (30%), Positives = 169/356 (47%), Gaps = 15/356 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++L A+ +N+ ++      A+  AV+K NAYGLG E IAPALY A  + FFV  + EGV 
Sbjct: 3   VNLAAIVDNYRTLARHVAPAQCGAVLKANAYGLGAEAIAPALYAANCRIFFVAQLSEGVA 62

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV- 128
           LR   P  A + VL G+ P      +   + P+++S+ Q+  +  L+         +   
Sbjct: 63  LRKILPTDAMVVVLNGVMPEAMAYCYAQQITPLLNSIDQVMAWLTLLETRQQRRAVMIQL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG+  Q+ +        +       IISHLA AD P   +N  Q   F+   + 
Sbjct: 123 DSGMSRLGVMPQQLMRLAAIFRERNWPAPDYIISHLANADRPDHALNVAQHALFQQAKTV 182

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPGI+L+G   +   S P++   T    I+ ++  
Sbjct: 183 FPSSRFSLANSCGMFLQPGWREDLCRPGIALFGVA-QPWFSRPLKPAFTLTLTILRVQDV 241

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG  V YG     TR   IA  + GYADG P  +                   +G  +P
Sbjct: 242 PAGTPVGYGSTITATRPLRIATISAGYADGVPRNM-----------RPPAGVCWRGVRLP 290

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +LG++ MD  M D +       GD ++  G    L+ VA A  T  Y+++ R+G R
Sbjct: 291 VLGRVCMDSFMVDASAVTP-TAGDKVEFIGAGQTLEQVAAACNTIPYEIMTRLGAR 345


>gi|315107293|gb|EFT79269.1| alanine racemase [Propionibacterium acnes HL030PA1]
          Length = 375

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFPRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|292488465|ref|YP_003531347.1| alanine racemase [Erwinia amylovora CFBP1430]
 gi|292899653|ref|YP_003539022.1| alanine racemase [Erwinia amylovora ATCC 49946]
 gi|291199501|emb|CBJ46618.1| Alanine racemase, catabolic [Erwinia amylovora ATCC 49946]
 gi|291553894|emb|CBA20939.1| Alanine racemase [Erwinia amylovora CFBP1430]
 gi|312172607|emb|CBX80863.1| Alanine racemase [Erwinia amylovora ATCC BAA-2158]
          Length = 356

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 92/367 (25%), Positives = 149/367 (40%), Gaps = 20/367 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL+ N       +  AR  +VVK NAYG G E +  +L       F + 
Sbjct: 2   SRPIVATINRAALRQNLAIARHSAAGARLWSVVKANAYGHGIEHVWQSLTE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  + D   +                       
Sbjct: 60  NLEEAILLRECGWKKPILLLEGFFHPDDLPLLDRYRLTTSVHSNWQINALAQAKLSAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG                +      +++H A A+        ++     
Sbjct: 120 IYLKMNSGMNRLGFQPDRVHSVWQKLRALENVGELTLMAHFADAETTEGVAGPLKRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SLA+S+  L  P  H+   RPGI LYG +            +Q V+T  
Sbjct: 177 EQAAEGLECPRSLANSAATLWHPQTHYDWVRPGIILYGASPSGQWRDIAGSGLQPVMTLT 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AG  V YGG+ +      I V A GYADGYP                G  
Sbjct: 237 SEIIAVQQLAAGSSVGYGGRYRANCSQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G ++MDM   D+T      +G  ++++G ++K+DDVA ASGT  Y+L+ 
Sbjct: 286 IRVDGEKTQIVGAVSMDMITVDLTPCPRAGIGSQVELWGDNVKIDDVAAASGTVGYELMC 345

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 346 ALAPRVP 352


>gi|295398172|ref|ZP_06808218.1| alanine racemase [Aerococcus viridans ATCC 11563]
 gi|294973522|gb|EFG49303.1| alanine racemase [Aerococcus viridans ATCC 11563]
          Length = 387

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 94/388 (24%), Positives = 159/388 (40%), Gaps = 35/388 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +  + L A+ +N+ ++    GN    AVVK + YGLG  KIA AL + G   F V 
Sbjct: 6   HRPSKAIVSLDAIIHNYFAIKKHIGNKAVMAVVKADGYGLGAVKIADALQSRGADGFAVA 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             +E ++LR     A I +L    P    ++ +  +   +SS+  L +  K         
Sbjct: 66  VADEALELRDAGIIAPIMILGLTDPDDAWLLANLEIGVTVSSLDYLKYAKKHDKDFSRLH 125

Query: 124 Y---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS--LIISHLACAD---DPSSHVN 175
                L+VD+G  R+G+   +      +   K   +     + +H A AD   D      
Sbjct: 126 QLNVHLKVDSGMGRIGVRSAKEAQKIIDYIAKHPKKFKLASVFTHYATADSFTDHGKDKV 185

Query: 176 SVQLERFRTLISH------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK- 228
             Q + F +L+                ++S+  L  P       R G+ LYG    +   
Sbjct: 186 QAQSDFFESLLGQLDYSALGYTPLFHQSNSALSLWYPEKTLDAARLGLGLYGSIPSMEDV 245

Query: 229 --SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                 +  +T E  II +++  AG+ +SYG       D  +A   IGYADG+  +  GL
Sbjct: 246 ASPVDFKQALTLETEIIYVKQMHAGDTISYGADYVAGTDEWVATLPIGYADGWQRSYLGL 305

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--IKLD 344
           D              + G   P +G+I MD  +  +   + +  G  + + G +    +D
Sbjct: 306 D------------AIVDGERCPSVGRICMDQMIIRLPHEMPV--GAKVTLIGTNGGQTVD 351

Query: 345 --DVALASGTTNYDLLVRIGTRYAKFYT 370
             DVA  +GT  +++L  +G R  + YT
Sbjct: 352 VVDVASHAGTIAHEVLTNLGQRLPREYT 379


>gi|114797948|ref|YP_759453.1| alanine racemase [Hyphomonas neptunium ATCC 15444]
 gi|114738122|gb|ABI76247.1| alanine racemase [Hyphomonas neptunium ATCC 15444]
          Length = 351

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 130/368 (35%), Positives = 188/368 (51%), Gaps = 21/368 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           ++  R  +    + +NW +++AL   A TAAVVK +AYGLG  ++A AL  AG Q FFV 
Sbjct: 2   SQMPRATVLTGNIADNWRTLDALHPGATTAAVVKADAYGLGAMRVARALRIAGCQTFFVA 61

Query: 64  SVEEGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             EEG+ +R      ARIFVL G    +     D +L  V+SS   +  +          
Sbjct: 62  YAEEGLIVRKAAGKAARIFVLNGPVRSEMATYRDADLTAVLSSEAHVKLW----GTAPKG 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             AL  DTG NRLGL +        +    +  Q  LI+SHLACADDP +  N+ Q + F
Sbjct: 118 SCALHFDTGMNRLGLPMD---MSEKDLAALRRLQPVLIMSHLACADDPENPANTAQRKAF 174

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             +   +    ASLA+S+G  LG  + + LTRPG++LYGGT    K   ++  V  EA I
Sbjct: 175 NEISDAFPDTPASLANSNGCYLGKGFAYDLTRPGLALYGGTTPPEK-VKLKPGVILEASI 233

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +       G  V YGG   L  D ++A  A+GYADG P   +   +           G++
Sbjct: 234 LATFSGQTGTKVGYGGTHTLPEDRILATCALGYADGIPRAGANQIT-----------GWL 282

Query: 303 KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           +G   P+LG+I+MD+   D+TD +   + G  ++  G + KL+  A A GT  Y+LL  +
Sbjct: 283 EGNPCPVLGRISMDLITLDVTDCVKHAKPGARVEFLGENAKLEVQAAACGTLGYELLTGL 342

Query: 362 GTRYAKFY 369
           G R  + Y
Sbjct: 343 GPRVQRVY 350


>gi|256545190|ref|ZP_05472556.1| alanine racemase [Anaerococcus vaginalis ATCC 51170]
 gi|256399231|gb|EEU12842.1| alanine racemase [Anaerococcus vaginalis ATCC 51170]
          Length = 368

 Score =  252 bits (643), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 90/376 (23%), Positives = 157/376 (41%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  L   +DL  + NN  S+   S N++  AV+K +AYGLG  ++A  + N  +   
Sbjct: 2   MEENYLL---VDLDKILNNIKSIKEKSQNSKFCAVLKADAYGLGSLEVANYIKNH-IDYI 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V   +E   LR    +  I +L  +   +       ++  VI  +      +  +    
Sbjct: 58  AVAQFKEAKYLRDNGIKIPILILGYLPIDKYNECGKLDIDVVIYDLDYAKEINSKL--NS 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                + +DTG  R+G      ++        K        SH A AD+      + Q +
Sbjct: 116 KINCHIGLDTGHTRIGFR-DFEIEKIKKLKELKNLNFIGAFSHFATADEKDLTYTNEQYK 174

Query: 181 RFRTLISH---YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQ 233
           +F  +I        ++    ++S   +  ++   L R GISLYG              ++
Sbjct: 175 KFTYIIDKIKDDFDLKLVHIANSAASMEYDFKSDLLRVGISLYGVYPSDYIKEISKIKLE 234

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V   +A+I  ++    G  +SYG     ++D  +A  AIGYADG+    S +       
Sbjct: 235 QVFEFKAQISFVKNVKKGTSISYGRTFTASKDMKVATVAIGYADGFKRAFSNI------- 287

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
               G+  + G +  ++G++ MD  M D++D    ++GDYI ++ PDI  +  A    T 
Sbjct: 288 ----GEVLVNGKLAKVVGRVCMDQMMIDVSDI-DCKIGDYITLY-PDIYKE--AKKINTI 339

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+L+  I  R  + Y
Sbjct: 340 PYELMTSISKRVPRIY 355


>gi|323487115|ref|ZP_08092423.1| hypothetical protein HMPREF9474_04174 [Clostridium symbiosum
           WAL-14163]
 gi|323694622|ref|ZP_08108788.1| alanine racemase [Clostridium symbiosum WAL-14673]
 gi|323399616|gb|EGA92006.1| hypothetical protein HMPREF9474_04174 [Clostridium symbiosum
           WAL-14163]
 gi|323501390|gb|EGB17286.1| alanine racemase [Clostridium symbiosum WAL-14673]
          Length = 393

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 158/375 (42%), Gaps = 26/375 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +I+L  +  N  +M A L        VVK + YG G   +A A  +  V  + V +VEE
Sbjct: 10  AEINLDNIIKNMETMAAGLPSGTGIIGVVKTDGYGHGAVPVAKA-IDPFVCGYAVAAVEE 68

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G+ LR +     + +L   H    K + D ++ P +    +    SK     G +    +
Sbjct: 69  GIILRKHKITKPVLILGSTHERYFKELLDYDIRPALYEYSKAEKLSKTAVKEGKTAKIHI 128

Query: 127 QVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
            +DTG +R+G    EA +            ++  + +H + AD+       +Q  R+   
Sbjct: 129 ALDTGMSRIGFQPGEASVREVERIHTLPGIRIEGLFTHFSKADESDKDFTELQYRRYMEF 188

Query: 186 IS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTA 238
                 +GIE      A+S+ I+  P       R GIS+YG     ++N+  P+   +  
Sbjct: 189 NDALKQRGIEIPVRHCANSAAIMDLPQMGLDAVRAGISMYGIYPSDEVNREMPLYPAMEI 248

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + +  ++    G  VSYGG     R   IA  + GY DGYP +LSG            G
Sbjct: 249 RSFVTCVKDIEPGTSVSYGGTFTAKRRMRIATISAGYGDGYPRSLSG-----------KG 297

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              I+G   PILG++ MD  M D+TD       D   + G D    + ++ +A   G   
Sbjct: 298 YVLIRGRRAPILGRVCMDQFMVDVTDIPGAAEEDRATLAGRDRDEMLSMERLADLCGGFR 357

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   +G R  + Y
Sbjct: 358 YEIPCVLGKRVPRVY 372


>gi|99081620|ref|YP_613774.1| alanine racemase [Ruegeria sp. TM1040]
 gi|123077575|sp|Q1GFQ4|ALR_SILST RecName: Full=Alanine racemase
 gi|99037900|gb|ABF64512.1| alanine racemase [Ruegeria sp. TM1040]
          Length = 345

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 129/365 (35%), Positives = 191/365 (52%), Gaps = 25/365 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RLKI+L AL  NW +++A + N  TAAVVK N YGL   ++  AL  AG ++FFV   E
Sbjct: 4   ARLKINLDALAINWRNLDAKT-NCETAAVVKANGYGLESGRVGKALAQAGARNFFVAIAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG+ LR    P   I V  G   G  K++ D  L P+++S+ Q+  + + +     HP+ 
Sbjct: 63  EGIALRRALGPGPGISVFAGHMEGDAKLLRDFQLTPMLNSLDQMLRHFESL---PGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E +     + ++      L++SHLAC+D+P   +N+ QL+ F  +
Sbjct: 120 VQLDSGMNRLGMEAAEWMAVRDIALDQ---NPVLLMSHLACSDEPGHGMNAYQLKNFIEM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 I  SLA++ G+LLG +YHF L RPGI LYGG    +       VV  E  +I +
Sbjct: 177 TEG-LNIPRSLAATGGLLLGRDYHFDLCRPGIGLYGGAPYADA----LPVVELEVPVIQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG      RDS IA  A GYADG                  G   +  G 
Sbjct: 232 RDLAPGESVGYGNTWIAQRDSKIATIAGGYADGLHRAFQ----------RQGIMAYAGGT 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+I+MD+   D+TD   +    Y+ +      +D +A A+ T  Y++L  +G RY
Sbjct: 282 PCPVVGRISMDLITVDVTDLAEVPP--YLSLMNETQTVDVLANAADTIGYEVLTSLGNRY 339

Query: 366 AKFYT 370
           A+ Y+
Sbjct: 340 ARTYS 344


>gi|171057608|ref|YP_001789957.1| alanine racemase [Leptothrix cholodnii SP-6]
 gi|226711053|sp|B1Y2H6|ALR_LEPCP RecName: Full=Alanine racemase
 gi|170775053|gb|ACB33192.1| alanine racemase [Leptothrix cholodnii SP-6]
          Length = 377

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 90/377 (23%), Positives = 155/377 (41%), Gaps = 26/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N       +G+A+  AV+K NAYG G E++ PAL   G     +  
Sbjct: 3   RPIEALIHPDALAHNLLQARRHAGDAKLWAVIKANAYGHGIERVWPALL--GADGLAMLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R    +  + +L G       ++    NL  V+    Q+ + +        H 
Sbjct: 61  LDEAQRVRNLGWRGPVLLLEGCFEARDLELCSRLNLWHVVHHDDQIGWLAAHK-THQPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS--SHVNSVQLER 181
             L++++G NRLG + Q                   +++H + AD P   +   + Q+ R
Sbjct: 120 VFLKMNSGMNRLGFTPQALRSAWVRLNALPQVDEISLMTHFSDADSPRPGADGIAAQVAR 179

Query: 182 FRTLISHYKGIEASLASSSGILLGP---NYHFQLTRPGISLYGGTDKINKSHPMQT---- 234
           F        G E SL++S+ IL             R GI  YG +    +          
Sbjct: 180 FVEATHDLPG-ERSLSNSAAILRHCERAEVRADWVRSGILSYGSSPDHPQHDIGHWNLRP 238

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T  +R+I  ++  AG+ V YG +    +   I + A GYADGYP    G         
Sbjct: 239 AMTLRSRLIATQQLQAGDSVGYGSRFVAQQPMRIGIVACGYADGYPRHAPGDTGN----- 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-----KLDDVALA 349
                  + G     +G+++MDM   D+++  +  VG  + ++G         +D VA A
Sbjct: 294 --ATPVLVDGLRTHTVGRVSMDMLAVDLSELPAAGVGSEVTLWGHGPHGSLLPIDAVAQA 351

Query: 350 SGTTNYDLLVRIGTRYA 366
           +GT  Y+L+  +  R  
Sbjct: 352 AGTIGYELMCALAQRVP 368


>gi|322390146|ref|ZP_08063680.1| alanine racemase [Streptococcus parasanguinis ATCC 903]
 gi|321143177|gb|EFX38621.1| alanine racemase [Streptococcus parasanguinis ATCC 903]
          Length = 370

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 74/378 (19%), Positives = 154/378 (40%), Gaps = 25/378 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNART-AAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +     ++DL A+  N   ++    +     AVVK NAYG G   +   L    V  F 
Sbjct: 5   KHRPTVARVDLDAIAFNVQQVSDHIPSQALKYAVVKANAYGHGVVAVTKKLAPQ-VDGFC 63

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V++++E +++R    Q  I +L  +      +  + ++   ++S+  L       +    
Sbjct: 64  VSNMDEALEIREEGLQHPILILGVVPSETVNLAKEHDIRLTVASLAWLDQLLGQEADLSG 123

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++VD+G  R+G    E +            ++  I +H A AD+        Q + 
Sbjct: 124 LKVHIKVDSGMGRIGFRRIEEIKEAERLLLAAGAEIEGIFTHFATADEADDRKFQAQYQF 183

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVV 236
           F+ +++  + +   +   +S+  L   +  F   R G  +YG       +   + ++  +
Sbjct: 184 FKEVLAALETLPPIVHASNSATSLWHADTIFTAVRLGDVMYGLNPSGSVLALPYEIKPAL 243

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + ++ +++  AG+ + YG          I    IGYADG+   +             
Sbjct: 244 SLVSELVHVKQLEAGQDIGYGATYTTEDAQWIGTIPIGYADGWIREMQNF---------- 293

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
             +  IK    PI+G+++MD     + + L +  G  + + G     +I   ++A   GT
Sbjct: 294 --QVLIKSEFCPIVGRVSMDQITVRLPEELPL--GTKVTLIGRDGEKEITATEIADYRGT 349

Query: 353 TNYDLLVRIGTRYAKFYT 370
            NY+++  +  R  + YT
Sbjct: 350 INYEVVCLLSDRIPRDYT 367


>gi|323463920|gb|ADX76073.1| alanine racemase 1 [Staphylococcus pseudintermedius ED99]
          Length = 382

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 154/376 (40%), Gaps = 25/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +K++L A+  N++++  L  N     VVK NAYGLG  +IA  L   G + F V +
Sbjct: 7   RTTTMKVNLDAITENYYALTKLQPNKTMMPVVKANAYGLGSIQIAQHLSQLGAEFFCVAT 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSCGVSH 122
           ++E ++LR++  + +I +L  I P          +   + S    +            + 
Sbjct: 67  LDEAIELRMHGIKEKILILSSIPPDAINKAIQHRVAVTVPSRAWLEAATAEIDEDNEKTL 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              ++VDTG NRLG+   EA     N  +     +         + D  +    +Q ERF
Sbjct: 127 WLHIKVDTGMNRLGVKDIEAYHDIINFIHAHENLVFEGAFSHFHSADEDNDSAHLQYERF 186

Query: 183 RTLISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVT 237
             +I          + +S+G L          RPGI+LYG           +  +   V 
Sbjct: 187 EEIIESTEHPTYIHMQNSAGTLRFNPSLCNAFRPGIALYGYYPSAFIEKIATAQLAPAVQ 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++ ++  + GE V YG       D  IA+  IGYADGY  ++             G
Sbjct: 247 LVTEVMEVKSLIKGETVGYGQTYTAPEDMTIALLPIGYADGYLRSMQ------------G 294

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               I      I+G+++MD T   +    ++++G+ + +          ++ +A    T 
Sbjct: 295 ANVRIGTTECEIVGRVSMDRTAIRVP--ATVQMGEEVILIDDQAHTSQSVESLAAQQQTI 352

Query: 354 NYDLLVRIGTRYAKFY 369
           NY++L  IG R  + Y
Sbjct: 353 NYEVLCNIGRRVPRVY 368


>gi|167589682|ref|ZP_02382070.1| alanine racemase [Burkholderia ubonensis Bu]
          Length = 377

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 21/359 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +      +R  AVVK NAYG G E+I P L         +  
Sbjct: 3   RPIVAHIRPAAVRHNLEFIRRTVAPSRVWAVVKANAYGHGIERIYPGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E V++R       + +L GI    +  + + + + V                      
Sbjct: 61  LDEAVRVRALGWDKPVLLLEGIFEPADVELAEHHRLTVAVHCDAQLDLLIAAKPQRPIDI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG            +          +++H A AD+        QL++F  
Sbjct: 121 QLKMNSGMNRLGYRPAAFRAAWERAAGAPSIGKITLMTHFANADEGE---IDWQLDQFDA 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEA 240
             +   G E S+++S+ +L  P  H    RPG  LYG +      H    P+   +T  +
Sbjct: 178 ATAGMPG-ERSVSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLIAAMTLTS 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +II ++     E V YG +    +   I V A GYADGYP                G   
Sbjct: 237 KIIGVQTLAPQETVGYGRRFAADQPMRIGVVACGYADGYPRHA-----------PTGTPI 285

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            + G +  ++G+++MDM   D+T   +  +G +++++G  +K+DDVA ASGT  Y+L+ 
Sbjct: 286 AVDGMLTRVVGRVSMDMLTVDLTPCPNAGIGSHVELWGDQVKVDDVAEASGTIGYELMC 344


>gi|255020460|ref|ZP_05292525.1| alanine racemase [Acidithiobacillus caldus ATCC 51756]
 gi|254970070|gb|EET27567.1| alanine racemase [Acidithiobacillus caldus ATCC 51756]
          Length = 365

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 157/373 (42%), Gaps = 22/373 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  I  +AL +N     A    A+  A VK NAYG G    AP L  AGV+ F V S
Sbjct: 3   RPVRACISASALAHNVAVARARMPGAKLMAAVKANAYGHGLAVCAPELARAGVEGFAVAS 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  +L          +L G   PG+  +      I VI    QL +  +         
Sbjct: 63  MEEAEQLYDLALGPSACLLAGPFAPGEIPLAAARGHILVIHRAAQLAWLQEQR-WNRPLS 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLS-LIISHLACADDPSSHVNSVQLERF 182
             ++ D+G +RLG +              +       ++SHLA +D P+   N+ Q+  F
Sbjct: 122 IWIKFDSGMHRLGFAPSALGPVFEALAAVQSPLRILGLMSHLARSDTPNDPHNTRQIREF 181

Query: 183 RTLISHYKGI---EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           R  I  +      E SLA+S  +L      F   RPG+ LYG +    +      ++ V+
Sbjct: 182 RAAIGQWGERTLGEHSLANSGAVLALGEARFPWMRPGLMLYGLSPFPGQTGRDLGLRPVL 241

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + +A+II  R+   GE + YG   +   +  + V A GY DG+   L             
Sbjct: 242 SWQAQIIATRRLAPGEWLGYGAAYQAPHEQRVGVVACGYGDGFDRHLG-----------Q 290

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-KLDDVALASGTTNY 355
           G   +I       LG+++MD+   D+ D    + GD++ + G     L+ +A   GT  Y
Sbjct: 291 GAPVWIGSQRSQTLGRVSMDLLFVDLQD-SDAQEGDWVTLMGVGAEPLESLAERLGTIPY 349

Query: 356 DLLVRIGTRYAKF 368
           +L  RI  R  + 
Sbjct: 350 ELGTRIQARVPRV 362


>gi|256848377|ref|ZP_05553820.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN]
 gi|256714975|gb|EEU29953.1| alanine racemase [Lactobacillus coleohominis 101-4-CHN]
          Length = 378

 Score =  251 bits (642), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 153/385 (39%), Gaps = 30/385 (7%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+S       + +DL AL++N  +  A L   +    VVK +AYG G  ++A  L   GV
Sbjct: 1   MNSARLRNTNVVVDLGALRHNIRAQKAALPAGSHIFGVVKADAYGNGMTQVAHVLSEEGV 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG  LR    Q  I VL         +  +  +   + SV  L  Y ++  
Sbjct: 61  AGFCVALLDEGFTLRNAGLQETILVLGITPVQYAPLAAENGISLTVGSVDWLKEYQQVAQ 120

Query: 118 CGV---SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                      L +DTG  R+G                   +   I +H A  D      
Sbjct: 121 TNHVRQPLKVHLGLDTGMGRIGFQDVTEFKQALQLVQTPEFEFEGIFTHFATVDSADKTY 180

Query: 175 NSVQLERFRTLIS--HYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTD---KINK 228
              QL +++  ++   ++     +A+S+  L    +      R GISLYG      ++  
Sbjct: 181 FEHQLTKWKQFLAVVDHRPRYVHMANSATGLWHQQDIESNTVRMGISLYGCNPSGRELQP 240

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           S  +Q V +       ++K   GE VSYG      +D  +A   +GYADGY   L+G   
Sbjct: 241 SFELQPVTSLITHATFVKKLHRGESVSYGATYTAQQDEWVATLPVGYADGYRRELTGY-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        + G +  ILG+I MD  M  +   + +  G    + G     +I   
Sbjct: 299 ----------HVLVNGQVCDILGRICMDQMMIRLPHQMPV--GTEAVLLGRSGDQEITAT 346

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A   GT NY++L   G R A+ Y
Sbjct: 347 DLADQLGTINYEVLTGFGDRLARKY 371


>gi|221069574|ref|ZP_03545679.1| alanine racemase [Comamonas testosteroni KF-1]
 gi|220714597|gb|EED69965.1| alanine racemase [Comamonas testosteroni KF-1]
          Length = 368

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 149/375 (39%), Gaps = 26/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             + + I   A+++N   +     +A+  +V+K NAYG G E +   L       F +  
Sbjct: 3   RPITVTIHPEAVRHNLERVRQAVPDAKLWSVIKANAYGHGIENVFEGLRA--TDGFAMLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E  ++R    +  I +L G+   ++  I     I       +   +       V H  
Sbjct: 61  LDEAQRVRQLGWRGPILLLEGVFELRDLEICSRLGIWHAVHCDEQIDWLAAHKTQVGHRV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + +                    ++H + AD         QL+ F  
Sbjct: 121 FLKMNSGMNRLGFTPERFRAAYARLNALPQVDEISFMTHFSDADVAHGI--DHQLKVFHE 178

Query: 185 LISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINKSHPMQT----VVTA 238
                 G  +   S++ +L G   +      RPGI LYG +                +T 
Sbjct: 179 TTLDLPGERSISNSAATLLYGDESNVRCDWVRPGIVLYGSSPDFPAHDAAHWGLEPTMTL 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +RII I++   G+ V YG + +      + V A GYADGYP                G 
Sbjct: 239 SSRIIGIQELQPGDTVGYGSRFQCDAPLRLGVVACGYADGYPRVC-----------PTGT 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTT 353
              ++G     LG+++MDM   D++      +G  + ++G       + +D+VA A+GT 
Sbjct: 288 PVLVEGVRTRTLGRVSMDMMAVDLSPVPKARLGSEVTLWGRASNGAVLPIDEVAAAAGTL 347

Query: 354 NYDLLVRIGTRYAKF 368
            Y+L+  +  R  K 
Sbjct: 348 GYELMCAVAPRVPKV 362


>gi|313803210|gb|EFS44406.1| alanine racemase [Propionibacterium acnes HL110PA2]
 gi|314963982|gb|EFT08082.1| alanine racemase [Propionibacterium acnes HL082PA1]
 gi|315081459|gb|EFT53435.1| alanine racemase [Propionibacterium acnes HL078PA1]
          Length = 375

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 24/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLRAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGMRLTVVDFDTLEAVSKAAVRLGITARIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
            VD+G  R+GL  +     T  +   +  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEFTRHEIDAFMTA 189

Query: 186 ISHYK----GIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           ++  +           ++SG +LG +     + R GI  YG     + +   +   ++  
Sbjct: 190 VTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I G + PI+G+I MD  M D+    S+ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIGGSVHPIVGRICMDQFMVDLGPDSSVTVGDEVVLIGTQGDEVLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAKF 368
           ++   I  R  + 
Sbjct: 359 EITCAISKRVDRR 371


>gi|194334745|ref|YP_002016605.1| alanine racemase [Prosthecochloris aestuarii DSM 271]
 gi|194312563|gb|ACF46958.1| alanine racemase [Prosthecochloris aestuarii DSM 271]
          Length = 386

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 149/372 (40%), Gaps = 25/372 (6%)

Query: 11  IDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I    L  N   +  L G   +   VVK NAYG     IA  L   GV DF V +++E +
Sbjct: 26  ISSAHLACNVKKIRDLIGKERKIMGVVKANAYGHDAPYIAGCLEKLGVSDFGVANIDEAL 85

Query: 70  KLRL---YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHPYA 125
           +LR        +RI                 N+   ++         +   +        
Sbjct: 86  QLRQTKAICDNSRILAFCSPLDSHIPFYLRHNVTMTVTDFRTMHAAAAAAKAANRLLNVH 145

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++VDTG  RLGL  ++A++   +       QL  + +H A +   S      Q + FR L
Sbjct: 146 VKVDTGMGRLGLPPEKAMELLSSIEENDHLQLEGVYTHFAQS-TISDDFTRRQTDCFRHL 204

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTA 238
            S ++      +    A S  I+   N H  + RPGI LYG       +     + V+  
Sbjct: 205 CSEFEHRFRRSVIKHAAGSGAIICQKNAHLDMVRPGIMLYGYPPDSTTTIGPELKPVMQF 264

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +A+II I++   G  +SY           IA  + GYADGY   LS   S          
Sbjct: 265 QAKIIFIKEVAPGTSISYNRTWIAPEKRTIATISAGYADGYHRRLSNRSS---------- 314

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDL 357
              I G   P  G +TMD TM D+ ++    VGD   +FG       D+A  +GT +Y+L
Sbjct: 315 -VTINGRSYPQAGTVTMDQTMVDLGNASRAAVGDTAVLFGWDGPSAADLADMAGTISYEL 373

Query: 358 LVRIGTRYAKFY 369
           L  +  R  + +
Sbjct: 374 LCAVSARVTRVF 385


>gi|323357274|ref|YP_004223670.1| alanine racemase [Microbacterium testaceum StLB037]
 gi|323273645|dbj|BAJ73790.1| alanine racemase [Microbacterium testaceum StLB037]
          Length = 373

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 82/370 (22%), Positives = 143/370 (38%), Gaps = 25/370 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID+ A+  N      L+G     AVVK + YG G  + A A    G     V+ ++E + 
Sbjct: 13  IDVDAITENVRHFRRLTG-VEVIAVVKADGYGHGAHRAAQAALRGGATRIGVSDIDEALA 71

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR     A +F                ++   IS + QL    +           L+++T
Sbjct: 72  LRRAGIHAPLFAWLHAPGASFVEAVRHDIELGISDIDQLLRAGESAQGDRPAAVHLKIET 131

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI--SH 188
           G +R G++  +       +   +      ++   +   + S   +   L RF   +  + 
Sbjct: 132 GLSRNGIAPADWRVVFAEAARLERIGRLRVVGLFSHLSNASEEDDRAALARFEEGVVLAA 191

Query: 189 YKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARI 242
             G+   L   +        P       R GI +YG +   +       ++  +T    +
Sbjct: 192 SVGLNPPLRHIAATHAAIALPEARLTGVRIGIGIYGISPFHDRTSADLGLRPAMTLRGAV 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
             +R+  AG  VSYG   +  RD+ +A+  +GYADG P   S             G   I
Sbjct: 252 SAVRRVPAGTGVSYGYVYRTERDTTLALVPLGYADGVPRQASDR-----------GPVVI 300

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLL 358
            G   P+ G++ MD  + D+ D   + VGD + +FG          D   A+ T +Y+++
Sbjct: 301 GGRRFPVAGRVAMDQFVVDVGDHP-VSVGDEVVLFGDPTLGVPAARDWGDAADTIDYEIV 359

Query: 359 VRIGTRYAKF 368
            R+G R  + 
Sbjct: 360 TRVGPRVPRR 369


>gi|261318416|ref|ZP_05957613.1| alanine racemase [Brucella pinnipedialis B2/94]
 gi|261297639|gb|EEY01136.1| alanine racemase [Brucella pinnipedialis B2/94]
          Length = 353

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 121/352 (34%), Positives = 179/352 (50%), Gaps = 28/352 (7%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYT-PQARIFVLYGIHPGQEKI 93
           +VK +AYGLG  ++APA Y AG +DFFV  + E V L+ +  P A ++VL G+ PG E  
Sbjct: 1   MVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEAVALKPFLKPDATLYVLNGLQPGTEAA 60

Query: 94  IFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
                ++PV++S+ Q+  ++ L    G   P  LQ DTG +RLGLS +E      N    
Sbjct: 61  CAREGILPVLNSLEQVENWAALATRLGKKLPALLQFDTGMSRLGLSAKEFDRLLENVTLL 120

Query: 153 KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL 212
               +   ISHLA  D+P +  N+ QL +   L++    + A+LA+S G  LG  Y+F L
Sbjct: 121 SRIDIKFAISHLANGDEPGNAANARQLAKMTALLARLPKLPAALANSGGTFLGKTYYFDL 180

Query: 213 TRPGISLYGGTDKINKS-------------HPMQTVVTAEARIILIRKALAGELVSYGGQ 259
            RPGI+LYG   +                 H +  V+T  AR+I +R    G  V YGG 
Sbjct: 181 ARPGIALYGIDPERQHDFSDKVAHENKKPKHSILPVLTLSARVIQVRDVDKGATVGYGGT 240

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
                   IA  A+GYADG   +LS             G  F     +PI+G+++MD   
Sbjct: 241 YVANGPMRIATIAVGYADGLFRSLSN-----------KGAAFFGDTRLPIIGRVSMDSIT 289

Query: 320 FDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            D+T      +++G  +++ GP  +L+DVA    T  Y++L  +G RYA+ Y
Sbjct: 290 LDVTSLPEGTLKLGSLVELIGPHQRLEDVARDCDTIPYEILTALGNRYARVY 341


>gi|91786104|ref|YP_547056.1| alanine racemase [Polaromonas sp. JS666]
 gi|123165554|sp|Q12H34|ALR_POLSJ RecName: Full=Alanine racemase
 gi|91695329|gb|ABE42158.1| alanine racemase [Polaromonas sp. JS666]
          Length = 364

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 96/375 (25%), Positives = 157/375 (41%), Gaps = 30/375 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N     + + +AR  AVVK NAYG G E +   L +     F +  
Sbjct: 3   RPILATIHRPALAHNLARARSAAPDARVWAVVKANAYGHGIEHVFDGLRS--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  +LR    +  I +L G       ++    +L  VI    Q+   +   +  V H 
Sbjct: 61  LAEARRLRALDWRGPILLLEGCFEARDLELCSRLSLWHVIHCNEQIDMLAAHKTQ-VPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLGL  +                   +++H + AD P     + QL  F 
Sbjct: 120 VFLKMNSGMNRLGLRPERFRAAWTRLNALPQVDEISLMTHFSDADGPKGI--AAQLRAFD 177

Query: 184 TLISHYKGIEASLASSSGILLGPN---YHFQLTRPGISLYGGTDKINK----SHPMQTVV 236
            +     G E SL++S+G+L   +         RPGI +YG      +       +Q  +
Sbjct: 178 AVTHDLPG-ERSLSNSAGVLRHGDELAARSDWVRPGIVVYGSAPDFPEHSAADWGLQPTM 236

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +RII +++  AG+ V YG          I V A GYADGYP   S            
Sbjct: 237 TLSSRIIGVQELAAGDTVGYGSSFTADGPLRIGVVACGYADGYPRHCS-----------T 285

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASG 351
           G    + G    ++G+++MDM   D+T      +G  + ++G       + +D+VA  +G
Sbjct: 286 GTPVLVNGVRTRMVGRVSMDMITVDLTPVPDAGMGAEVTLWGRSSGGAVLPIDEVAQTAG 345

Query: 352 TTNYDLLVRIGTRYA 366
           T  Y+L+  +  R  
Sbjct: 346 TVGYELMCAVAPRVP 360


>gi|108803647|ref|YP_643584.1| alanine racemase [Rubrobacter xylanophilus DSM 9941]
 gi|108764890|gb|ABG03772.1| alanine racemase [Rubrobacter xylanophilus DSM 9941]
          Length = 365

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 99/380 (26%), Positives = 156/380 (41%), Gaps = 32/380 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     +  ++DL A+++N  ++   S   R  AVVK +AYG G   +A A    G    
Sbjct: 1   MEVPGRVWAEVDLGAVRHNVRTLRRRSRAPRLMAVVKADAYGHGAVPVARAALAGGADSL 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V +  EG +LR    +A + V   + P   +      L     SVP     +   + G+
Sbjct: 61  AVATAGEGAELRRAGIRAPVLVFGDLTPEGLRAAARERLAVSAHSVPSARRIA---ASGL 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+VDTG NR GL   E       +          + +HLACAD         QL 
Sbjct: 118 DLEVHLKVDTGMNRWGLEPGE----VGAALKALGRTPDGVYTHLACADSDP-EATGRQLA 172

Query: 181 RFRTLISHYK--GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
            F ++++ +   G  A  A+S+G L  P  H+   RPGI+LYG     +   P    +  
Sbjct: 173 LFDSVLAAHPFGGALAHAANSAGTLWHPGSHYGCVRPGIALYGLHPAGDAGDPAAEGLRP 232

Query: 239 ----EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
               ++ +  +R+   GE VSYG   +     L A   +GYADGY   LSG         
Sbjct: 233 ALALKSYVAAVRRLEPGEGVSYGLTFRAPEPMLAATVPVGYADGYRRALSGRAEALIRGR 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
                G            ++MD  +F       + VGD + + G      ++ +++A  +
Sbjct: 293 RRPLLGR-----------VSMDACVF--AADREVRVGDEVVLLGEQGGGAVRAEELAARA 339

Query: 351 GTTNYDLLVRIGT-RYAKFY 369
           GT NY++   +   R  + Y
Sbjct: 340 GTINYEITTGLNPRRVERSY 359


>gi|325684688|gb|EGD26842.1| alanine racemase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 376

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/387 (21%), Positives = 150/387 (38%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N       L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKDHLKPGQKLFCVVKANAYGHGASRLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRAQIVKPILVLGLQPAEEAALAAVNDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
             G+     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++ IL   +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESLLTVKPKWIHVDNTAAILFDKDVASDIVRFGIGLYGLNPSSAPGSRDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALKPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|313123077|ref|YP_004033336.1| alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279640|gb|ADQ60359.1| Alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 376

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 85/387 (21%), Positives = 150/387 (38%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N       L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKDHLKPGQKLFCVVKANAYGHGASRLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRAQIVKPILVLGLQPAEEAALAAVNDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
             G+     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++ IL   +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESMLTVKPKWIHVDNTAAILFDKDVASDIVRFGIGLYGLNPSSAPGSRDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALKPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|256826606|ref|YP_003150565.1| alanine racemase [Cryptobacterium curtum DSM 15641]
 gi|256582749|gb|ACU93883.1| alanine racemase [Cryptobacterium curtum DSM 15641]
          Length = 421

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 94/386 (24%), Positives = 169/386 (43%), Gaps = 31/386 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +  ++ID +A+++N H     L  N R  AVVK +AYG G  +++    N+G     V
Sbjct: 46  RRWAWVEIDRSAIRHNLHEAKRRLQPNCRLMAVVKADAYGHGAVEVSRTALNSGADALAV 105

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVS 121
            +V+EG+ LR    +A I +L         ++ +  ++P +  +   L +     +  + 
Sbjct: 106 ATVDEGIALREAGLRAPILLLSEPPQAAIPLLLEYKIMPSVYRAEFALAYGEIADAHHLK 165

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            P+ L V+TG NR+G+  ++ L+F       +  +     +H A AD P +    +Q++R
Sbjct: 166 APFHLAVNTGMNRIGVHAEDILEFERQISFHRALEQEGTFTHFATADCPENLDFRIQMKR 225

Query: 182 FRTLISHYK--GIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKS--HPMQT 234
           F   I   +  GI+  +  ++     L  P  HF + R GI++YG            ++ 
Sbjct: 226 FTEAIEALRLAGIDPGIVHAANSAALLRYPESHFDMARIGIAMYGFHPCEETRDVVDLKP 285

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ARI  IR    GE VSYG   +      I    +GYADG+   LSG  +      
Sbjct: 286 AMSVYARITDIRNVSVGEGVSYGLNYRSPGSVRICTIPLGYADGFNRLLSGKVN------ 339

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDIT-------DSLSIEVGDYIQIFGPD----IKL 343
                  + G     +G I MD  MF++          L+ ++GD + + G        +
Sbjct: 340 -----VILDGQYCRQVGNICMDQCMFEVDMRTYGTHPRLNPQLGDIVTVVGNQGDAITTI 394

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
            ++A  + T  +++ +    R  + Y
Sbjct: 395 TEMAYLANTIEHEVAIGFAWRLPRLY 420


>gi|225012399|ref|ZP_03702835.1| alanine racemase [Flavobacteria bacterium MS024-2A]
 gi|225003376|gb|EEG41350.1| alanine racemase [Flavobacteria bacterium MS024-2A]
          Length = 362

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 151/371 (40%), Gaps = 20/371 (5%)

Query: 6   FLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              L + L+ + +N++ +   ++   +   VVK NAYG      A  L   GV    V  
Sbjct: 1   MNTLTLSLSNIDHNYNCIREQINATTQIIGVVKANAYGSSSIHFASRLVELGVDYLAVAY 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--SH 122
            EEG +LR    +  I V Y         + D  L P + +   L  + K++       +
Sbjct: 61  TEEGQQLRSQGVKIPIMVFYPQLDA-LDTLLDACLEPCLYNETILEGFKKILLEKKISHY 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P  ++ +TG NRLG +  ++        N      S+     A      S +   Q+E F
Sbjct: 120 PVHIKYNTGLNRLGFTPDQSDWVLEQMKNNCFQLESVYSHLAASEAKRPSALCKSQIELF 179

Query: 183 RTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
             L   +     +  +  L +SSG+   P + + + R GI+L+G  +  +    ++ +  
Sbjct: 180 EILKIKHSSVSNQPPKFHLLNSSGVFNYPEHQYDMVRCGIALHGFANHPDWDAHLKPICV 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            E+ I  I +   G  V Y    +  +++ IA   +G+ADG                   
Sbjct: 240 LESSITQIHQVKKGNFVGYDHGWQAPQNTQIATLPLGHADGIGRHFG----------HHK 289

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
           G   I G   PI+G + MD+ M D+T     E GD ++ FG        AL   + +Y+L
Sbjct: 290 GSVMINGKKAPIVGNVCMDLLMVDVTSI-DCEEGDKVKFFGELNTASTFALQGNSISYEL 348

Query: 358 LVRIGTRYAKF 368
           +  +G+R  + 
Sbjct: 349 ITGLGSRIKRI 359


>gi|259908277|ref|YP_002648633.1| Alanine racemase, catabolic [Erwinia pyrifoliae Ep1/96]
 gi|224963899|emb|CAX55402.1| Alanine racemase, catabolic [Erwinia pyrifoliae Ep1/96]
 gi|283478209|emb|CAY74125.1| dadX [Erwinia pyrifoliae DSM 12163]
          Length = 356

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 21/370 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   I+  AL+ N       +G AR  +VVK NAYG G + +  +L       F + 
Sbjct: 2   SRPIVATINRAALRQNLAIARYTAGGARLWSVVKANAYGHGIDHVWQSLNE--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  I D   +                       
Sbjct: 60  NLEEAILLRERGWKKPILLLEGFFHPDDLQILDRYRLTTSVHSNWQINALAQAKLSAPID 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   +          + +      +++H A A+       +  L+R  
Sbjct: 120 IYLKMNSGMNRLGFQPERVHGVWQKLRSLENVGELTLMAHFADAESAEG--VAEPLKRIE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAE 239
              +       SLA+S+  L  P  H+   RPGI LYG +            +Q V+T  
Sbjct: 178 Q-AAEGLECPRSLANSAATLWHPQTHYDWVRPGIILYGASPSGQWQDIAGSGLQPVMTLT 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I +++  AG  V YG + +      I V A GYADGYP                G  
Sbjct: 237 SEVIAVQQLAAGSGVGYGSRYRANCSQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G    I+G ++MDM   D+T  L   +G  ++++G ++K+DDVA ASGT  Y+L+ 
Sbjct: 286 IRVDGEKTQIVGAVSMDMITVDLTPCLQAGIGSQVELWGDNVKIDDVASASGTVGYELMC 345

Query: 360 RIGTRYA-KF 368
            +  R   + 
Sbjct: 346 ALAPRVPVRV 355


>gi|302877856|ref|YP_003846420.1| alanine racemase [Gallionella capsiferriformans ES-2]
 gi|302580645|gb|ADL54656.1| alanine racemase [Gallionella capsiferriformans ES-2]
          Length = 353

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 95/365 (26%), Positives = 163/365 (44%), Gaps = 20/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  ID  AL+NN H     + ++R  AV+K + YG G  ++A AL     + F +  
Sbjct: 3   RPIQALIDQNALENNLHVARR-AASSRIMAVIKADGYGHGLLRVAEALAA--AEGFALLD 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +++ V+LR    +  I +L G     +  +     +  +                 +   
Sbjct: 60  IQDAVRLREAGYRQTILLLEGFFDAADLALIAAYELTTVIHSNWQIALLDAYPGRGTLDV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G +RLG S +       +       +   ++SH + AD+P     S+QL     
Sbjct: 120 WLKVNSGMHRLGFSPEGVNAAMKSLRAHAAVREITLMSHFSHADEPRG--VSLQLALINE 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
            I+    +  SLA+S+ +L  P  H    RPG+ LYG +   +   +   ++ V+T  +R
Sbjct: 178 -IASEYRVARSLANSAALLRYPATHGDWVRPGVMLYGASPFADTSAQQLGLKPVMTLSSR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II I+   AG+ V Y G  +  R   I V A GYADGYP                G    
Sbjct: 237 IIAIQNLQAGDEVGYAGVFRADRTMRIGVVACGYADGYPRHAPN-----------GTPVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G    +LG+I+MDM   D+T      +G  + ++G  + ++ VA A+GT +Y+L+  +
Sbjct: 286 VDGRKTQLLGRISMDMLCVDLTALPDSGMGAQVTLWGQGLPVETVAAAAGTISYELMCGL 345

Query: 362 GTRYA 366
             R  
Sbjct: 346 TARVP 350


>gi|254419455|ref|ZP_05033179.1| alanine racemase [Brevundimonas sp. BAL3]
 gi|196185632|gb|EDX80608.1| alanine racemase [Brevundimonas sp. BAL3]
          Length = 346

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 119/362 (32%), Positives = 177/362 (48%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL AL  N+H++ A++G      VVK +AYGLG E  A  L   G + FFV    EG
Sbjct: 7   LSVDLNALARNFHTLEAVTG-VPVHPVVKADAYGLGAEACAKRLMAEGARTFFVARAGEG 65

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR    P+  ++VL G H     ++   +L PV++   Q+  +++           LQ
Sbjct: 66  AALRTALGPEPVLYVLDGCHGEAAGLLKAADLRPVLNQPAQMKAWAEAGGGA----CGLQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG   ++A +             SL++SHLAC D+P   +N  Q +RF  ++ 
Sbjct: 122 IDTGLNRLGFRPEDAPEVFDGL--------SLVMSHLACGDEPDQPMNRRQRDRFAGMVE 173

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            Y G+  S A+S G  LGP++ F   RPG+ LYGG  +      +  V    A ++L+R 
Sbjct: 174 RYPGVTRSFANSGGCFLGPDFAFDAVRPGVCLYGGGPEGRPDERIAPVAALTAEVLLVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y       R    AV A GYADG                   G  ++ G   
Sbjct: 234 VRTGESVGYSRGFVAERPMRAAVVAAGYADGVLRAYGPR-----------GAVWVAGETR 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P+LG+I+MD+   D+T    + VGD +++FG    +D  A A+GT +Y+LL  +  R  +
Sbjct: 283 PLLGRISMDVCTVDVTGL-EVAVGDRVELFGAHRPIDAAAAAAGTISYELLTAVTVRVPR 341

Query: 368 FY 369
            Y
Sbjct: 342 AY 343


>gi|330000338|ref|ZP_08303687.1| alanine racemase [Klebsiella sp. MS 92-3]
 gi|328538021|gb|EGF64193.1| alanine racemase [Klebsiella sp. MS 92-3]
          Length = 333

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 20/344 (5%)

Query: 27  SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI 86
           +  +R  AVVK NAYG G  ++  AL       F + ++EE + LR    +  I +L G 
Sbjct: 2   APGSRLWAVVKANAYGHGVARVWSALSA--ADGFALLNLEEAILLREQGWKGPILLLEGF 59

Query: 87  HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
               E  + D   +             +           L+V++G NRLG   +      
Sbjct: 60  FHADELAVLDQYRLTTSVHSNWQIKALQQAKLRAPLDIYLKVNSGMNRLGFMPERVHTVW 119

Query: 147 HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGP 206
                        ++SH A A++P   V  ++        +       SLA+S+  L  P
Sbjct: 120 QQLRAISNVGEMTLMSHFAEAENPQGIVEPMRRI---EQAAEGLDCPRSLANSAATLWHP 176

Query: 207 NYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKKL 262
             HF   RPGI LYG +         +  ++ V+T  + II ++    GE + YGG  + 
Sbjct: 177 EAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLRSEIIGVQNLRPGEAIGYGGLYRT 236

Query: 263 TRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI 322
           T++  I + A GYADGYP                G    + G     +G+++MDM   D+
Sbjct: 237 TQEQRIGIVACGYADGYPR-----------VAPSGTPVLVDGVRTTTVGRVSMDMLAVDL 285

Query: 323 TDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           T      +G  ++++G +IK+DDVA +SGT  Y+L+  +  R  
Sbjct: 286 TPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCALAPRVP 329


>gi|160903082|ref|YP_001568663.1| alanine racemase [Petrotoga mobilis SJ95]
 gi|160360726|gb|ABX32340.1| alanine racemase [Petrotoga mobilis SJ95]
          Length = 374

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 153/372 (41%), Gaps = 28/372 (7%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I++     N + +   +  A    V+K NAYG G   +A  ++  G     V  +EE ++
Sbjct: 10  INIDKYLENLNYIQNQT-KAHIIPVLKANAYGHGMLPLAMQVFKEGYSMLAVAYLEEALE 68

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV---SHPYALQ 127
           +        I +     P   K + +       +              G       + + 
Sbjct: 69  ILNRGIHLPILIFNYFSPDDFKELLEFAHFLRPTITSSTFLEKVCDILGKDVDKFKFHIN 128

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG NR+G+  ++         ++   Q+  + SH A AD+       VQ E+++ L+ 
Sbjct: 129 VDTGINRIGIKEEKLPQLIKLIKDR-NIQIEGVYSHFANADE-KDDFTRVQFEKYKGLLD 186

Query: 188 HYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-QTVVTAEAR 241
           +  G      +  +++S+  L  P +     RPGI+ YG            + ++  ++ 
Sbjct: 187 YIIGSGIDVEKKHISNSAAALFFPEFALDYVRPGIATYGLQPSTTYKIDQLKPILELKSI 246

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  I+     + + YG   ++ +    A+  IGYADGY   LS             G+  
Sbjct: 247 VANIQNLQPNDTIGYGRTYEVQKRMKTAIVPIGYADGYFRALSN-----------KGEVL 295

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDL 357
           I G    ILG+++MD  + D+TD  ++ +GD + I G      I  ++VA  + T NY++
Sbjct: 296 INGKRSKILGRVSMDQIVVDVTD-NNVSLGDEVVIIGRQKYDQITAEEVAENASTINYEV 354

Query: 358 LVRIGTRYAKFY 369
             RI  R  + Y
Sbjct: 355 TSRIAQRVRRIY 366


>gi|326381872|ref|ZP_08203565.1| alanine racemase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199298|gb|EGD56479.1| alanine racemase [Gordonia neofelifaecis NRRL B-59395]
          Length = 386

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 150/388 (38%), Gaps = 31/388 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S+  L   +DL A+ +N   +   SG A   AVVK + Y  G   +      AG    
Sbjct: 1   MDSHANLYATVDLGAIAHNVGVLRDRSG-ADVIAVVKADGYAHGAVPVGRTALRAGAIAL 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCG 119
            V  + E   LR       +                  +   +SS  Q           G
Sbjct: 60  GVAQIREARALRAAGLDGHLIAWLHTTDADFAGAITDGIDIAVSSPRQLAAVVQAARGLG 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNS 176
            +   ++++DTG  R G++  E                      + HLA  D P   +NS
Sbjct: 120 RTATVSVKLDTGLARSGVAPDEWDATAEAIAAASAEGAISLHGAMCHLAFGDVPEHPLNS 179

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SH 230
           +Q ER    ++             +A+S   L  P+      RPG+S+YG +        
Sbjct: 180 LQGERLDEAVADLTRRGVTPELVHIANSPAALTRPDLARDAVRPGLSVYGYSPVPEIGDF 239

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +   +T E RI LI++  AG+ VSY       R++ + V   GYADG P  LSG     
Sbjct: 240 GLIPAMTLETRISLIKRIPAGQGVSYNHTWVAPRNTFLGVVPAGYADGVPRGLSGRLG-- 297

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPD--------I 341
                      + G + P +G+I MD  + D+  D   +  GD   +FGP          
Sbjct: 298 ---------VHVNGRVFPSVGRICMDQLVIDLGPDGGGVAEGDRAILFGPACASAGEPVP 348

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
              D A A+GT +Y+++ R+G+R  + Y
Sbjct: 349 TATDWADATGTIDYEIISRVGSRAVRRY 376


>gi|104773514|ref|YP_618494.1| alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           11842]
 gi|123251998|sp|Q1GBP6|ALR_LACDA RecName: Full=Alanine racemase
 gi|103422595|emb|CAI97198.1| Alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           11842]
          Length = 376

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 86/387 (22%), Positives = 151/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N     A L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKAHLKPGQKLFCVVKANAYGHGAARLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRAQIVKPILVLGLQPAEEAALAAANDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
             G+     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++ IL   +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESLLTVKPKWIHVDNTAAILFDKDVASDIVRFGIGLYGLNPSSAPGSRDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALKPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|313792676|gb|EFS40762.1| alanine racemase [Propionibacterium acnes HL110PA1]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 147/373 (39%), Gaps = 24/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL A+  N       +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLRAIAANLAVARKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGMRLTVVDFDTLEAVSKAAVRLGITARIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
            VD+G  R+GL  +     T  +   +  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEFTRHEIDAFMTA 189

Query: 186 ISHYK----GIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           ++  +           ++SG +LG +     + R GI  YG     + +   +   ++  
Sbjct: 190 VTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I G + PI+G+I MD  M D+    S+ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIGGSVHPIVGRICMDQFMVDLGPDSSVTVGDEVVLIGTQGDEVLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAKF 368
           ++   I  R  + 
Sbjct: 359 EITCAISKRVDRR 371


>gi|260437330|ref|ZP_05791146.1| alanine racemase [Butyrivibrio crossotus DSM 2876]
 gi|292810242|gb|EFF69447.1| alanine racemase [Butyrivibrio crossotus DSM 2876]
          Length = 372

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 157/379 (41%), Gaps = 38/379 (10%)

Query: 11  IDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L ++  N        G + +  A+VK NAYG G  ++A A+ +  V  F V +V E +
Sbjct: 11  IHLDSIYKNIEEAKKRVGSDTKIMAIVKANAYGHGAVEVAGAIKDK-VYGFAVATVREAL 69

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVSHPYALQV 128
            LR       I VL  +   + + +   N+I  +++              G++    +++
Sbjct: 70  TLRESGVDNPILVLGYVCKAEYESVIRNNIIFAMLTKDMAKDISECAARIGITAKCHIKI 129

Query: 129 DTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +TG NR+G  + +EA+D        +      I  H A AD         Q E F  +IS
Sbjct: 130 NTGMNRIGFPVNEEAIDDIAELTGYEGLDCEGIFMHFATADSADKSYAKHQFELFMDVIS 189

Query: 188 H-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEA 240
                  +      A+S+ I+  P Y   + R GI LYG      ++ S      +  + 
Sbjct: 190 KLEKRGIQFKIRHCANSAAIIDLPEYKLDMVREGIILYGLKPSDEVDASMKYYPALELKT 249

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +++  AGE +SYG      R   IA  AIGYADGYP +LS             G  
Sbjct: 250 HVIFVKELGAGESISYGRTFVTDRPMRIATVAIGYADGYPRSLSN-----------KGYV 298

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSI----------EVGDYIQIFGPDIKLDDVALAS 350
            I G    ++G++ MD  M D+TD   +          + G        +I  ++V   S
Sbjct: 299 LIHGKKAKVVGRVCMDQMMIDVTDIPDVNVEDVVTVVGKDGSE------EITFEEVGELS 352

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           G  NY+ +  I  R  + Y
Sbjct: 353 GRFNYEFVCDISERVERKY 371


>gi|126665189|ref|ZP_01736172.1| alanine racemase [Marinobacter sp. ELB17]
 gi|126630559|gb|EBA01174.1| alanine racemase [Marinobacter sp. ELB17]
          Length = 359

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/364 (25%), Positives = 160/364 (43%), Gaps = 21/364 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  AL++N+      SG +   AV+K + YG            A V  F V  +EE + 
Sbjct: 9   IDSKALQHNYQVACQRSGQSSAMAVIKADGYGH-GIAGVAGALAAVVPKFAVACIEEAIA 67

Query: 71  LRLYTP--QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           +R      Q    +             + N  PV+    Q      L+    +    L+V
Sbjct: 68  IRNAGVGQQPVALLQGVHSEQDLATCIEHNFEPVLHCDDQ---LQWLVQAPAAPRIWLKV 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERFRTLIS 187
           +TG NRLG   +E         + +L    +  ++H ACADD  S +   Q ERF    +
Sbjct: 125 NTGMNRLGFHAEELAQVMATLAHHQLTPKVIGFVTHFACADDKRSTMTQQQTERFEKATA 184

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIIL 244
            +  ++ S+A+S+ +       F  +RPGI LYG +  +        +++V+T +A +I 
Sbjct: 185 PWPELQLSVANSAALFRPGQKLFGWSRPGIMLYGASPIVGTSAAELGLKSVMTLQAPLIS 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R    G+ V YG      + + + + A+GY DGYP                G    I G
Sbjct: 245 TRLLQPGDTVGYGADWVACKPTRMGIVALGYGDGYPRHAG-----------TGTPAAIHG 293

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             + ++G+++MDM   D++ + +   GD ++++G  + +DDVA  +GT  Y+LL  +  R
Sbjct: 294 QRIQLIGRVSMDMLAVDLSAAPAARNGDPVELWGATVPVDDVAGHAGTIGYELLTGVTAR 353

Query: 365 YAKF 368
             + 
Sbjct: 354 VPRR 357


>gi|163732015|ref|ZP_02139461.1| alanine racemase [Roseobacter litoralis Och 149]
 gi|161394313|gb|EDQ18636.1| alanine racemase [Roseobacter litoralis Och 149]
          Length = 344

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 127/363 (34%), Positives = 182/363 (50%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL+AL  NW ++NA S ++ TAAVVK NAYGLG    A  L  AG + FFV   EEG
Sbjct: 6   LTIDLSALAANWRNLNARS-DSETAAVVKANAYGLGLRTAASVLAQAGARHFFVAVAEEG 64

Query: 69  VKLRLYTPQARIF-VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR          V  G   G   +I D  L P+I+S+ Q     + +     H + +Q
Sbjct: 65  AALREVLGTGPQISVFSGHMEGDTPLIRDAGLTPMINSIDQ---LIRHVEALPDHDFGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+   E       +  +     SL++SHLACAD+PS  +N  QL+ F  +  
Sbjct: 122 LDTGMNRLGMEDAEWRSVREVATQR---PPSLVMSHLACADEPSHQMNRQQLDCFIEMT- 177

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           H      SLA++ G+L+G +YHF LTRPGI LYGG   ++       VV  +  +I +R 
Sbjct: 178 HDISAPRSLAATGGLLMGSDYHFDLTRPGIGLYGGLPFVDA----LPVVQLDVPVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y         + IA  + GYADG    +    + H+  V            V
Sbjct: 234 VHPGETVGYANTWTAAAPARIATISAGYADGLIRAMGAKANLHAGDVA-----------V 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+++MD+   D+T   +      +Q+ G    +D VA  + T  Y++L  +G RY +
Sbjct: 283 PVVGRVSMDLIGVDVTALSADPE--SLQLIGRHQSVDTVADFADTIGYEILTSLGERYKR 340

Query: 368 FYT 370
            YT
Sbjct: 341 VYT 343


>gi|300726819|ref|ZP_07060249.1| Mur ligase domain protein/alanine racemase [Prevotella bryantii
           B14]
 gi|299775932|gb|EFI72512.1| Mur ligase domain protein/alanine racemase [Prevotella bryantii
           B14]
          Length = 824

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 88/371 (23%), Positives = 145/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+  N +   + +    +   ++K NAYG G  +IA  L +  V    V   +E
Sbjct: 465 LEVNLNAVVKNLNWYRSFMKPETKLVCMIKANAYGAGSVEIAKTLQDHRVDYLAVAVADE 524

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR     + I ++        K +FD  L P + S   L    K          P  
Sbjct: 525 GVTLRRNGITSNIMIMNPEMTA-FKTMFDYELEPEVYSFRLLEALIKAAEKEGITDFPVH 583

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLA-CADDPSSHVNSVQLERFR 183
           +++DTG +RLG     +         ++       + SH      D     ++ Q   F 
Sbjct: 584 IKLDTGMHRLGFDPINDMDKLIDRLKHQNAVIPRSVFSHFVGSDSDDFDDFSANQFALFD 643

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P     + R G+ LYG   + N+     +  T 
Sbjct: 644 AGSKKLQAAFDHKILRHIDNSAGIEHFPERQLDMCRLGLGLYGINSRNNEIINNVS--TL 701

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ +R    G+ V Y  +  +  DS+IA   IGYADG    L               
Sbjct: 702 KTTILQMRHIPVGDTVGYSRKGTIEHDSVIAAIPIGYADGLNRHLGNRHC---------- 751

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG  + +  ++    T  Y++L
Sbjct: 752 YCLVNGQKAEYVGNICMDVAMIDVTGI-DCKEGDTVEIFGDHLPVTVLSDVLDTIPYEVL 810

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 811 TNISDRVKRIY 821


>gi|313771042|gb|EFS37008.1| alanine racemase [Propionibacterium acnes HL074PA1]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 150/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +  E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATGAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG  +  +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTRTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|320354045|ref|YP_004195384.1| alanine racemase [Desulfobulbus propionicus DSM 2032]
 gi|320122547|gb|ADW18093.1| alanine racemase [Desulfobulbus propionicus DSM 2032]
          Length = 374

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/376 (25%), Positives = 155/376 (41%), Gaps = 27/376 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               R+++  +AL +N+      +  A    +VK + YG G    A      G   F V 
Sbjct: 2   RSLNRVEVSRSALIHNFGICRQWADGAAIMPLVKADGYGHGMIDCARVFAEQGAAAFGVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
              EGV+LR       I VL G+ P     + + +L PV+     +   S+L        
Sbjct: 62  EAIEGVRLRAAGITQPILVLAGVIPQTLPTMVEADLTPVVVDAAIVPELSRLAGLQRREI 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++D G  R G+  ++ +D           +L  +++H  C+D+P S  ++  L  F
Sbjct: 122 GVHVKLDAGMGRQGVLPEDFVDLVRTVRGAPHLRLDGVMAHFPCSDEPQSANSAQVLRTF 181

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN------KSHP 231
               +        G    LA+S G+         + RPGI+LYG                
Sbjct: 182 TATTASLAALTGGGCCLHLANSGGLFYVAGARLDMVRPGIALYGYYPDGETGRAAAAPPL 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +    RII +R+  AG  + Y      +R S IAV  +GY DGY   LS       
Sbjct: 242 LRPAMRFATRIIQVRRVPAGSGLGYSHLFTTSRPSTIAVLPVGYDDGYLRKLSNR----- 296

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  I G  VP +G+I+M++T+ D+T    ++VGD   + G      I  D++A
Sbjct: 297 ------AQVLIHGRRVPTVGRISMNLTLVDVTGIDGVQVGDEAVLLGRQGEETITADEIA 350

Query: 348 LASGTTNYDLLVRIGT 363
               T +Y++L   G 
Sbjct: 351 AWMETISYEVLCLFGK 366


>gi|50083405|ref|YP_044915.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter sp. ADP1]
 gi|49529381|emb|CAG67093.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter sp. ADP1]
          Length = 365

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 89/374 (23%), Positives = 145/374 (38%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I L AL +N   + A +  ++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQ--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  +LR       I +L GI  P          L   +    Q+ +            
Sbjct: 61  IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGH-PEDAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG    +              +    + H + AD         + Q + 
Sbjct: 120 IFLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDL 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F   I    G   S+++S+ IL  P  H  + R GI LYG +            ++  ++
Sbjct: 180 FEDTIRDLPG-PKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMS 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II I+     E V YG      +   I + A GYADGY                 G
Sbjct: 238 LRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRI-----------SPTG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM   D++      +G  + ++G       + +DDVA ASGT
Sbjct: 287 TPVLVDGIETRTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 347 VGYELMCAVTARVP 360


>gi|219849394|ref|YP_002463827.1| alanine racemase [Chloroflexus aggregans DSM 9485]
 gi|219543653|gb|ACL25391.1| alanine racemase [Chloroflexus aggregans DSM 9485]
          Length = 811

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 163/375 (43%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + +DLTA+ +N  ++   +G      V+K + YG G  ++A A   AG +   V +
Sbjct: 447 RPTWVHLDLTAIADNVRALRHHTG-VPLMVVLKGDGYGHGAARVARAALAAGAEMVAVAT 505

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           V EG  LR     A I VL    P Q       +L+  +          +  +  G    
Sbjct: 506 VGEGRSLRAQGISAPILVLGYTPPWQVAEAIRLDLMVTLFDDDTAQALSAAALELGRPAR 565

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VDTG  RLG+S      F +   +    +   + +H A AD+        QL+  +
Sbjct: 566 VHIKVDTGMARLGVSPAAVGPFLYYLRDLPGIEPVGLYTHFARADEADPEPTKHQLQLLQ 625

Query: 184 TLISHYK--GIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PMQTVV 236
           T+++     G+   L    +S+  L  P  +F + RPG++ YG            M   +
Sbjct: 626 TVLAEITAAGLRPPLVHAANSAATLRFPMTYFDMVRPGLACYGIAPSPVVPLLPGMHPAL 685

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + +  +R+  AG  +SYGG    +R S IA   +GYADG   + +            
Sbjct: 686 SFYSEVAQVREHPAGTPISYGGAYVTSRPSRIATIPVGYADGLRRSPAWR---------- 735

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I+G   PI+G+I MD  M D+TD   ++ GD + I G      I +D++A   GT
Sbjct: 736 --EVLIRGRRAPIVGRICMDYAMVDVTDIPGVQRGDPVTIIGRQGEEVIGVDEIAGWLGT 793

Query: 353 TNYDLLVRIGTRYAK 367
            +Y++L  I  R  +
Sbjct: 794 ISYEVLTGILPRVPR 808


>gi|329766869|ref|ZP_08258397.1| alanine racemase [Gemella haemolysans M341]
 gi|328837594|gb|EGF87219.1| alanine racemase [Gemella haemolysans M341]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 92/382 (24%), Positives = 164/382 (42%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++   +L+++L AL NN++ +N+L+      AVVK ++YGLG + IA  LY  GV+ F
Sbjct: 1   MINDRPTQLRVNLDALLNNYNKLNSLNNEKIGLAVVKADSYGLGSKVIAEHLYQNGVRHF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCG 119
              ++EE ++L+     + + VL  I+    K   + N  +   S          L    
Sbjct: 61  ATATLEEALELKDVIKDSMVLVLGVINSQNVKYAVENNVSLTCPSKEWLEESLVHLQQIE 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 +++DTG  R+G S  E L    N  + +      I SH + AD    + ++ Q 
Sbjct: 121 GKLKIHVKLDTGMGRIGTSDLEELKEIDNLLDSEKIDFEGIFSHYSNADGEDDNYDNYQT 180

Query: 180 ERFRTLISHYKGIEASLA----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
           E F   +  +      +     + +      +  + LTR GI++YG     N     +  
Sbjct: 181 ENFERSLKIFTHKPKYIHIENSAGTVKYSNRDDQYNLTRIGIAMYGCYPSGNIEKLDKVQ 240

Query: 236 V----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +    +  +++  ++K  AG+ + YG   +  +D  IA   IGYADG      G      
Sbjct: 241 LEPVASLVSKVTHVKKFQAGQKLGYGVSYEAKQDEYIATVPIGYADGLLRRAQGF----- 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                  K  +      I+G++ MD  M   +   +++VGD +  FG      + +D+ A
Sbjct: 296 -------KIRVGSEECEIVGRVCMDQLMVRCSK--NVKVGDDVLFFGEYSGQKVSVDEFA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   I  R  + Y
Sbjct: 347 EYQNTISYEIFCCINKRVPRVY 368


>gi|314969163|gb|EFT13261.1| alanine racemase [Propionibacterium acnes HL037PA1]
          Length = 375

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V  V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVAPVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|256844406|ref|ZP_05549892.1| alanine racemase [Lactobacillus crispatus 125-2-CHN]
 gi|256849206|ref|ZP_05554639.1| alanine racemase [Lactobacillus crispatus MV-1A-US]
 gi|262047222|ref|ZP_06020180.1| alanine racemase [Lactobacillus crispatus MV-3A-US]
 gi|295692134|ref|YP_003600744.1| alanine racemase [Lactobacillus crispatus ST1]
 gi|312978404|ref|ZP_07790146.1| alanine racemase [Lactobacillus crispatus CTV-05]
 gi|256613484|gb|EEU18687.1| alanine racemase [Lactobacillus crispatus 125-2-CHN]
 gi|256713982|gb|EEU28970.1| alanine racemase [Lactobacillus crispatus MV-1A-US]
 gi|260572467|gb|EEX29029.1| alanine racemase [Lactobacillus crispatus MV-3A-US]
 gi|295030240|emb|CBL49719.1| Alanine racemase [Lactobacillus crispatus ST1]
 gi|310894747|gb|EFQ43819.1| alanine racemase [Lactobacillus crispatus CTV-05]
          Length = 376

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 143/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N    M  L+   +  AVVK NAYG G  ++A      G     V
Sbjct: 6   HRPAVVKVNLGAIRRNIKNEMKHLATGQKMLAVVKANAYGHGAVEVAKIAIEEGAAGLCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++E ++LR       I VL  + P    I    N+   I ++  L    K +    + 
Sbjct: 66  AILDEALQLRHADIVKPILVLGVVSPEYAPIAAANNVSLTIPNLEWLKEAEKYLEKEQLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               + VD+G  R+G +  E     +             + +H A AD         Q+E
Sbjct: 126 LKVHIGVDSGMGRIGFNEDEDFIAANKFLQNNDNFYVEGMFAHFASADSADDTYFKHQVE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +   +      R GI +YG     N   P       
Sbjct: 186 KFAHMRSLLTVKPKWIHVDNTAASIFNKDVPSDCVRFGIGIYGLNPSSNPDSPDLKSSIS 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHEGDGVGYGSTFVADQDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I   D      +   A
Sbjct: 301 -------KVKVGDEYCPIVGRICMDQFMVKMPKKMPL--GTKVVIISNDPTAPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|327457519|gb|EGF04174.1| alanine racemase [Propionibacterium acnes HL092PA1]
          Length = 375

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 148/373 (39%), Gaps = 24/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLRAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I  L    P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGITLPILKLSPADPWDMDAAITSGMRLTVVDFDTLEAVSKAAVRLGITARIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTL 185
            VD+G  R+GL  +     T  +   +  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPEHLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEESTRHEIDAFMTA 189

Query: 186 ISHYK----GIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           ++  +           ++SG +LG +     + R GI  YG     + +   +   ++  
Sbjct: 190 VTQTQTDRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTINPGDAIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I G + PI+G+I MD  M D+    S+ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIGGSVHPIVGRICMDQFMVDLGPDSSVTVGDEVVLIGTQGDEVLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAKF 368
           ++   I  R  + 
Sbjct: 359 EITCAISKRVDRR 371


>gi|89054230|ref|YP_509681.1| alanine racemase [Jannaschia sp. CCS1]
 gi|122498888|sp|Q28RK6|ALR_JANSC RecName: Full=Alanine racemase
 gi|88863779|gb|ABD54656.1| alanine racemase [Jannaschia sp. CCS1]
          Length = 342

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 123/360 (34%), Positives = 181/360 (50%), Gaps = 28/360 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL AL  N+ +++ L   A TAAVVK + YGLG   ++  L  AG   FFV + EEG
Sbjct: 6   LTVDLGALVANYRTLDRLGPGA-TAAVVKADGYGLGAGLVSTGLAKAGACQFFVATAEEG 64

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V LR    P   I V  G   G   +I D +L P+++S  Q+  +  ++     HPY +Q
Sbjct: 65  VGLRQVLGPAPEINVFAGHMAGDTPLIRDAHLTPMLNSPKQVQRHRHVL---PGHPYGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +RLG+   +           +L   +L++SHLACAD P    N+ QL +FR L  
Sbjct: 122 LDTGMHRLGVQPADWPAL-----RDQLHDATLLMSHLACADAPDHPQNAAQLAQFRALTD 176

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
             +    SLA++ G L+GP+YHF L RPG+ LYGG          + VV     +I IR 
Sbjct: 177 GIQ-TPRSLAATGGTLMGPDYHFDLIRPGVGLYGGLPFAGA----RPVVRLSLPVIQIRC 231

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              G  + YG     T    IA  + GYADG    LS   +            +      
Sbjct: 232 VNPGATIGYGATYTATTPRQIATLSAGYADGLIRALSSKATL-----------WDGDTPC 280

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+++MD+   D+TD  +    + + I GP   +D +A A+GT  Y++L  +G RY +
Sbjct: 281 PLVGRVSMDLLTVDVTDCDT--PPEALDILGPHQTIDQLAEAAGTIGYEILTSLGPRYRR 338


>gi|161407967|ref|YP_001015793.2| alanine racemase [Prochlorococcus marinus str. NATL1A]
          Length = 402

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 161/385 (41%), Gaps = 29/385 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                +++D   ++NN   +    G+     AVVK + YG G E +A +    G     V
Sbjct: 29  RSRAWVEVDSKIIENNARVLKNFIGDDCSLMAVVKADGYGHGAETVAKSALTGGADSLGV 88

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++EEG++LR    + +I +L  +   +E        +    S  +       ++     
Sbjct: 89  ATLEEGIQLRNAGLKCQILILGNLINSEELYSSFCWDLIPTISGIREAIICNNIAENKHK 148

Query: 123 PY--ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-----VN 175
            +   L+VDTG  RLG    E  D        +   L  I SHLA AD            
Sbjct: 149 KFFIHLKVDTGMTRLGCDCDEVKDLISKIDYLENISLKGIYSHLAIADKDLEKNTKLNFT 208

Query: 176 SVQLERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKS 229
            +Q+ RF  ++    +  K +   LA+S+G L     HF + R G+SLYG          
Sbjct: 209 QIQVTRFEKVLKDLGARNKSLCRHLANSAGTLSDSRLHFDMVRVGLSLYGYFPVNDFESD 268

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +  ++R+ L+R+   G  V YG   K  R S +AV AIGYADG    LSG  S 
Sbjct: 269 LRLKPALKVKSRVTLVREVEKGIGVGYGHFFKTQRKSKLAVVAIGYADGVSRNLSGKISA 328

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       I G +VP +G I MD  +FDITD   I  G  + + G D    I   +
Sbjct: 329 S-----------IDGVLVPQVGAIAMDQMVFDITDKPDIRTGQVLTLLGTDGAVCISPQN 377

Query: 346 VALASGTTNYDLLVRIGTRYAKFYT 370
               SG+  +++L     R  +  T
Sbjct: 378 WCDLSGSIPWEVLCGFRNRLPRVVT 402


>gi|123961746|gb|ABM76529.1| putative Alanine racemase [Prochlorococcus marinus str. NATL1A]
          Length = 427

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 105/385 (27%), Positives = 161/385 (41%), Gaps = 29/385 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                +++D   ++NN   +    G+     AVVK + YG G E +A +    G     V
Sbjct: 54  RSRAWVEVDSKIIENNARVLKNFIGDDCSLMAVVKADGYGHGAETVAKSALTGGADSLGV 113

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++EEG++LR    + +I +L  +   +E        +    S  +       ++     
Sbjct: 114 ATLEEGIQLRNAGLKCQILILGNLINSEELYSSFCWDLIPTISGIREAIICNNIAENKHK 173

Query: 123 PY--ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-----VN 175
            +   L+VDTG  RLG    E  D        +   L  I SHLA AD            
Sbjct: 174 KFFIHLKVDTGMTRLGCDCDEVKDLISKIDYLENISLKGIYSHLAIADKDLEKNTKLNFT 233

Query: 176 SVQLERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKS 229
            +Q+ RF  ++    +  K +   LA+S+G L     HF + R G+SLYG          
Sbjct: 234 QIQVTRFEKVLKDLGARNKSLCRHLANSAGTLSDSRLHFDMVRVGLSLYGYFPVNDFESD 293

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +  ++R+ L+R+   G  V YG   K  R S +AV AIGYADG    LSG  S 
Sbjct: 294 LRLKPALKVKSRVTLVREVEKGIGVGYGHFFKTQRKSKLAVVAIGYADGVSRNLSGKISA 353

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       I G +VP +G I MD  +FDITD   I  G  + + G D    I   +
Sbjct: 354 S-----------IDGVLVPQVGAIAMDQMVFDITDKPDIRTGQVLTLLGTDGAVCISPQN 402

Query: 346 VALASGTTNYDLLVRIGTRYAKFYT 370
               SG+  +++L     R  +  T
Sbjct: 403 WCDLSGSIPWEVLCGFRNRLPRVVT 427


>gi|84515510|ref|ZP_01002872.1| alanine racemase [Loktanella vestfoldensis SKA53]
 gi|84510793|gb|EAQ07248.1| alanine racemase [Loktanella vestfoldensis SKA53]
          Length = 345

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 134/367 (36%), Positives = 196/367 (53%), Gaps = 33/367 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           RL IDL A+  NW +++A++ N +TAAV+K + YGLG   IA AL+ AGV+ FFV   EE
Sbjct: 5   RLTIDLDAVVANWRALDAMT-NCKTAAVIKADGYGLGSVNIAKALFKAGVRQFFVAVAEE 63

Query: 68  GVKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
              +R    P+  I V  G   G    I D NL P+++SV Q+T + + +     HP+ +
Sbjct: 64  AAPIRAELGPRPEINVFSGHMKGDTAAIRDLNLTPMLNSVEQVTHHFETL---PGHPFGI 120

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG NRLGL +QE       + ++     +L++SHLACAD+P   +N  QL  F  + 
Sbjct: 121 QLDTGMNRLGLEMQEWAAIAGLALDQ---NPTLVMSHLACADEPDHPMNPHQLANFHMMT 177

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                +  SL+++ GILLGP+YHF LTRPGI LYG     +       V+  E  ++ IR
Sbjct: 178 DGIS-VPRSLSATGGILLGPDYHFDLTRPGIGLYGADPFSD----GTPVIELEFPVVQIR 232

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY- 305
               GE+V YG   +  R S IA  + GYADG   +LS                F  G  
Sbjct: 233 DVAQGEVVGYGNSWQAERASRIATISGGYADGIIRSLSDRAI------------FYHGKT 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDY--IQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
              ++G+++MD+   D+TD       D   + +   +  +DDVA  +GT  Y+LL ++G 
Sbjct: 281 PCKLVGRVSMDLMTIDVTDLSE----DPKALSLICAEQTVDDVARRAGTIGYELLTQLGG 336

Query: 364 RYA-KFY 369
           RY  + Y
Sbjct: 337 RYTRRIY 343


>gi|323465799|gb|ADX69486.1| Alanine racemase [Lactobacillus helveticus H10]
          Length = 376

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 81/381 (21%), Positives = 141/381 (37%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +K++L A++ N    M  L  N +  AVVK N YG G  ++A      G   F V 
Sbjct: 7   RPAVVKVNLGAIRRNIKNEMQHLEPNQKMLAVVKANGYGHGAVEVAKVAEEEGAAGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKI-IFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++E ++LR       I VL  + P    I   +   + V +          L    +  
Sbjct: 67  ILDEALELRRADIVKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKDTEKYLAKENLQL 126

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +D+G  R+G +   E +       N     +  + +H A AD         Q E+
Sbjct: 127 KIHLGIDSGMGRIGFNEDDEFVAANKFLENNDNFFIEGMFAHFASADSDDETYFKHQCEK 186

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------- 232
           F+ + S        +   +++  +        L R GI +YG     N S P        
Sbjct: 187 FKHMKSLLTVKPKWIHVDNTAASIFHSGIKSDLVRFGIGIYGLNPSSNPSSPDLTSAIEL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G       
Sbjct: 247 EPALSFESELTHVKTIHKGDGVGYGSTFMAEEDTIIGTVPVGYADGWIRKYQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 K  +     PI+G+I MD  M  +   + +  G  + I   +      +   A 
Sbjct: 301 ------KVKVGDEYCPIVGRICMDQFMVKMPKKMPV--GTKVVIISNNPSDPNNIKAAAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y++   +  R  + Y
Sbjct: 353 YVDTIHYEVACLLNDRLPRVY 373


>gi|269218932|ref|ZP_06162786.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212043|gb|EEZ78383.1| alanine racemase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 382

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 103/394 (26%), Positives = 161/394 (40%), Gaps = 39/394 (9%)

Query: 1   MHSNE---------FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPA 51
           M ++              +IDL+A+++N  S+   +G A   AVVK +AYG G  ++A A
Sbjct: 1   MRTHSAGGIVISYYPAEARIDLSAIRSNLSSVREAAGEAAVLAVVKADAYGHGRAEVARA 60

Query: 52  LYNAGVQDFFVTSVEEGVKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT 110
           L  A         + E + LR    P  RI                 ++     +   + 
Sbjct: 61  LAPA-ADYLGAAQLGEALALREEVGPGPRILTWIFAPGAPLAQALRADVELSAGAFWAID 119

Query: 111 FYSKLMS-CGVSHPYALQVDTGFNRLGLS---LQEALDFTHNSFNKKLGQLSLIISHLAC 166
             ++     G +    L+VDTG  R G +   + EA           L  +  + SHLA 
Sbjct: 120 EIARAARETGTTAKVHLKVDTGMARGGFNLADVAEASRRLRALQADGLFSVVGLWSHLAR 179

Query: 167 ADDPSSHVNSVQLERFRT--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYG 221
           AD+P S     Q+ERF      +  +GIE     LA+S G L  P   + + RPGI LYG
Sbjct: 180 ADEPESGATERQIERFEQARAAARSEGIEPEILHLAASGGALWHPAARYDMVRPGIVLYG 239

Query: 222 GTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
            +        +   +   +   A +IL R   A   +SYG  +K    + + V  +GY D
Sbjct: 240 LSPNPEVATARELGLTPAMELSASLILERGVPAQTPISYGHTEKTEAPTRLGVVPLGYGD 299

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           G P   SG+       V              I G++ MD  + D+ ++ +   GD   +F
Sbjct: 300 GIPRAASGVGPVSVGGV-----------RTRIRGRVCMDQFVVDVPEAATA--GDTAFLF 346

Query: 338 GPD--IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G       D+ A A GT  Y+++ R+G R  + Y
Sbjct: 347 GAGDLPSADEWAQACGTIGYEIVTRLGARVPRRY 380


>gi|317968847|ref|ZP_07970237.1| alanine racemase [Synechococcus sp. CB0205]
          Length = 405

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 107/381 (28%), Positives = 168/381 (44%), Gaps = 28/381 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   ++ID  A++ N  ++   L       AVVK + YG G   +A +    G   F V
Sbjct: 25  RQRAWVEIDEAAIQANAEALRRSLQPGCALMAVVKADGYGHGAVPVARSAAAGGASCFGV 84

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EGV+LR       + VL    HP + +      L+P +S + +      L S  G 
Sbjct: 85  ATLQEGVELRQAGLDQPVLVLGNLSHPDELRACLHWQLMPTLSGMREALLCQNLASGSGR 144

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSV 177
                L++DTG +RLG   +E           +  QL+ + SHLA AD   +    + + 
Sbjct: 145 QLAVHLKLDTGMSRLGAPWEEGPRLVQAIAGLESLQLAGVYSHLAGADAPGNGLDALTAT 204

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q +RF ++++  +  +       LA+S+G L     H+ L R G++LYG      +    
Sbjct: 205 QQQRFDSVLTGLQQQQLPSGCRHLANSAGTLRSRQLHYDLVRVGLALYGQRPSDHLGSGL 264

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +Q  +   AR+ LIR+  AG  VSYG +    R S +AV  IGYADG P  LS      
Sbjct: 265 DLQPAMHVRARVSLIREVPAGVGVSYGHRFITQRPSRLAVVGIGYADGVPRLLSNQL--- 321

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                   +    G  VP LG ITMD  + D TD   +E G  + + G +    I     
Sbjct: 322 --------EVLFGGQRVPQLGAITMDQLVLDATDVPELEAGSVVTLLGEEAGERIDPTAW 373

Query: 347 ALASGTTNYDLLVRIGTRYAK 367
           +   GT  +++L     R  +
Sbjct: 374 SDPIGTIPWEILCGFKHRLPR 394


>gi|300812106|ref|ZP_07092554.1| alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300496945|gb|EFK32019.1| alanine racemase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 376

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 86/387 (22%), Positives = 151/387 (39%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N     A L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKAHLKPGQKLFCVVKANAYGHGASRLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRVQIVKPILVLGLQPAEEAALAAANDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
             G+     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEGLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++  L G +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESLLTVKPKWIHVDNTAASLFGKDVASDIVRFGIGLYGLNPSSAPGSQDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALKPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|325125145|gb|ADY84475.1| Ala racemase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
          Length = 376

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/387 (21%), Positives = 149/387 (38%), Gaps = 32/387 (8%)

Query: 1   MHS--NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M +  N    L I+L A+K N     A L    +   VVK NAYG G  ++AP +  AG 
Sbjct: 1   MITAVNRPAALHINLAAIKENTRQAKAHLKPGQKLFCVVKANAYGHGAARLAPVMEEAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
             F V  ++EG++LR       I VL      +  +    ++   +SS+  L    K++ 
Sbjct: 61  DGFCVAMLDEGLELRRAQIVKPILVLGLQPAEEAALAAANDISLPVSSLDWLKKAEKVLR 120

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVN 175
              +     L +D+G  R+G S  E     +          +  + +H A AD   +   
Sbjct: 121 KEDLQLKIHLAIDSGMGRIGFSEDEDFKAVNEYLQGNDAFFVEGMFTHFASADSADASYF 180

Query: 176 SVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK-------I 226
             Q++RF+ + S        +   +++  L   +    + R GI LYG           +
Sbjct: 181 DYQVKRFKHMESLLTVKPKWIHVDNTAASLFDKDVASDIVRFGIGLYGLNPSSAPGSRDL 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
             +  ++  ++  + +  +++   G  V YG       D  I    +GYADG+     G 
Sbjct: 241 EPAFALKPAMSFVSELTYVKQIHKGYGVGYGSTHIAEEDEWIGTVPVGYADGWIRKFQGF 300

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----K 342
                       K  +     PI+G++ MD  M  +     +  G  +++   D      
Sbjct: 301 ------------KVKVGDTYCPIVGRVCMDQFMVLLPK--EVPAGTPVELISADPAAPNS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           L   A    T +Y++  +   R  + Y
Sbjct: 347 LRRAADWLDTIHYEVACQFNDRLDRIY 373


>gi|169630818|ref|YP_001704467.1| alanine racemase [Mycobacterium abscessus ATCC 19977]
 gi|169242785|emb|CAM63813.1| Alanine racemase [Mycobacterium abscessus]
          Length = 405

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 96/387 (24%), Positives = 161/387 (41%), Gaps = 35/387 (9%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL A+ +N   +   +G AR   VVK + YG G  ++A A   AG  +  VTS+ 
Sbjct: 23  AQAVIDLGAIAHNVKLLREHAGTARLMTVVKADGYGHGAVRVARAALAAGADELGVTSIA 82

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E +++R     A +                 ++   +SS+ Q     +   S G     +
Sbjct: 83  EALQIRAAGLDAPLLAWLHAPGADYAAALHADVEVAVSSLGQLGELLAAARSTGRQAITS 142

Query: 126 LQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           ++VDTG NR G+     ++  +    +  ++  +L  I+SH A AD P      +Q+ RF
Sbjct: 143 IKVDTGLNRNGVPAGYTRDLFEALAKAQAEESIRLRGIMSHFAYADQPGHPTVDMQIGRF 202

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--------- 228
              +   +G       A L++S+  L  P+  + + RPGI++YG                
Sbjct: 203 NEALELARGFGLRYELAHLSNSAATLTRPDARYDMVRPGIAVYGINPLGAAESATSNRGR 262

Query: 229 -SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            S  +   ++    +  ++   AGE VSYG      RD+  A+  IGYADG    L    
Sbjct: 263 TSFDLIPAMSLTCAVSSVKPVSAGEGVSYGHVWTAPRDTNAALIGIGYADGVVRALGNRF 322

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGP----DIK 342
                      +  I G   P +G++ MD  + D+ D    ++ GD   +FGP    +  
Sbjct: 323 -----------EVAIGGRRYPNIGRVCMDQFVVDLGDNDAGVQAGDVATLFGPGTGGEPT 371

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
             D A    T  Y+++     R  + Y
Sbjct: 372 AQDWAELLDTIAYEVVTGPRGRVVRTY 398


>gi|302337568|ref|YP_003802774.1| alanine racemase [Spirochaeta smaragdinae DSM 11293]
 gi|301634753|gb|ADK80180.1| alanine racemase [Spirochaeta smaragdinae DSM 11293]
          Length = 402

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 92/386 (23%), Positives = 154/386 (39%), Gaps = 29/386 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H     + ++DL  L  N  ++   SG      ++K NAYG G    A      GV    
Sbjct: 8   HPLRRTQAEVDLDLLSKNIRTLWNRSGCEGYLLLLKANAYGHGSIACAKMAEELGVTFGG 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGV 120
           V + +E   LR    +  + +L  +   +    FD ++   +SS+      +++    G 
Sbjct: 68  VAAYQEVRFLRSAGVRLPLLLLEDLFDDEIAPAFDADVSFSVSSLAYAEKVARVAEKAGK 127

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L VDTG  RLG    E +       + +   L  + SH   +D+    V + Q+E
Sbjct: 128 VGKVHLNVDTGMGRLGCFPDELMKVAGYVHHSRWLALEGLFSHFPSSDEGDLSVPTAQIE 187

Query: 181 RF-----RTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKIN--KSHPM 232
            F         +  +      A+S  ++  P    F + RPG+S +G            +
Sbjct: 188 LFSRLDRELEAAGIRPKWRHFANSGAVIDFPAASSFDMIRPGVSSFGIYPSKEVTHDVGL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             V++ ++ I+ IR    G  + YG      R+S IAV  IGY DGY    S        
Sbjct: 248 FRVLSLKSAILSIRTFPKGAKIGYGSTFVTERESRIAVVPIGYGDGYVRAFSNNSD---- 303

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGP--------DIKL 343
                    + G  VP++G+I+MDM   D+TD    +  GD   + G         +I  
Sbjct: 304 -------VLVHGRRVPVVGRISMDMITVDLTDLPESVATGDEAVLVGEQAWEDRSGEIDA 356

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           +D+A   GT +Y++   +  R  + +
Sbjct: 357 EDLAARIGTISYEVTCLLTARVPRVF 382


>gi|254426806|ref|ZP_05040513.1| alanine racemase [Alcanivorax sp. DG881]
 gi|196192975|gb|EDX87934.1| alanine racemase [Alcanivorax sp. DG881]
          Length = 353

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 20/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R++I  +AL +N      L+  A   A+VK N YG G    A A++   V    V  
Sbjct: 2   RGTRVEIRPSALAHNARLARQLADGAEVFAMVKANGYGHGLLLAADAMHEN-VSGLGVAL 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           VEE   LR +     I V  G    +E    +   + V+  V        L++       
Sbjct: 61  VEEARALREHGMTLPILVAEGFFDAEELKEAERLSLEVV--VHSQWQVELLLASPCPVRI 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V+TG NRLG    +                  ++SH ACAD      +  QL     
Sbjct: 119 WLKVNTGMNRLGFRP-DTALQAAAQLRAGGMAPVGVMSHFACADVSQDAYSEKQLLV-AG 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
            I+    +  S ++S+ +L  P  H Q  RPGI LYG +           +       AR
Sbjct: 177 QIAEQLMLPLSASNSAALLRYPQSHAQRVRPGIMLYGSSPFDWQTASELGLAVSHRFTAR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I I    AGE V YG          +AV A+GY DGYP                G    
Sbjct: 237 VIAINAVEAGESVGYGATWTAAEPRQVAVVAVGYGDGYPRHA-----------PSGTPVA 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           + G +  ++G+++MDM   D+T      VGD ++++G  + +DDVA A GT +Y+L  +I
Sbjct: 286 VNGNITELVGRVSMDMLTVDVTGL-DASVGDEVELWGDVVDVDDVARACGTISYELFCQI 344

Query: 362 GTRYAKF 368
             R  + 
Sbjct: 345 TGRPERV 351


>gi|329770407|ref|ZP_08261789.1| alanine racemase [Gemella sanguinis M325]
 gi|328836530|gb|EGF86190.1| alanine racemase [Gemella sanguinis M325]
          Length = 375

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 94/382 (24%), Positives = 167/382 (43%), Gaps = 27/382 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++   RL ++L AL  N+  +N LS      A+VK N+YGLG + I+  LY  GV+ F
Sbjct: 1   MINDRPTRLIVNLDALLRNYEKLNNLSDKKVGLAIVKANSYGLGSKVISKLLYENGVRHF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCG 119
            V + EE ++L+    ++ I VL   +P   K   + N+ +   S         +L S  
Sbjct: 61  AVATFEEALELKEVIKESLILVLGVTNPKNVKYAVENNISLTCPSKEWLEEAIKELDSIT 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 ++++TG NR+G   ++ +       +    +   + SH + AD  ++  +  Q 
Sbjct: 121 GKLKVHVKIETGMNRIGTFEEKEILEIDELLDYPKVEFEGVFSHYSNADGENNDYDDYQT 180

Query: 180 ERFRTLISHYKGIEASLA----SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHP 231
             F  L++ +K     +     + +      + ++ L+R GISLYG     N        
Sbjct: 181 ANFNRLVALFKHKPRYVHIENSAGTVKYNDRDDNYNLSRIGISLYGCYPSKNIEKLNKLE 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++ V +  +++  +++   G  V YG   + + D  IA   IGYADG      G      
Sbjct: 241 LEPVASLVSKVTHVKRIPKGTKVGYGISYETSEDEYIATVPIGYADGLLRRAQGFKLN-- 298

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVA 347
                     + G    I+G++ MD  M   ++   I+VGD + +FG      I +D+ A
Sbjct: 299 ----------VAGEECEIVGRVCMDQLMVRCSE--KIKVGDDVLVFGEYNNQKISVDEFA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   I  R  + Y
Sbjct: 347 DYQKTISYEIFCCINQRVPRKY 368


>gi|294814508|ref|ZP_06773151.1| Alanine racemase [Streptomyces clavuligerus ATCC 27064]
 gi|326442897|ref|ZP_08217631.1| alanine racemase [Streptomyces clavuligerus ATCC 27064]
 gi|294327107|gb|EFG08750.1| Alanine racemase [Streptomyces clavuligerus ATCC 27064]
          Length = 396

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 101/382 (26%), Positives = 158/382 (41%), Gaps = 29/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R +IDL AL+ N  ++ A +  A   AVVK + YG G    A A   AG +     
Sbjct: 7   HTRARAEIDLAALRANVRALRARAPRAGLMAVVKADGYGHGAVPCARAAIAAGAEWIGTA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSH 122
           + +E + LR      RI        G  +   +  L   +S +       +   + G + 
Sbjct: 67  TPDEALALRAAGVPGRIMCWLWTPGGPWREGIEAGLDMSVSGLWALDEVVAAARATGRTA 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQL 179
              L+ DTG  R G    +       +   +      I    SH ACAD+P     + QL
Sbjct: 127 RIQLKADTGLGRNGCQPADWAALVAAARAAEAEGAVRITGLWSHFACADEPGHPSIAHQL 186

Query: 180 ERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSH 230
             FR +++H            +A+S   L  P  HF L RPGI++YG +        +  
Sbjct: 187 TAFREMVAHAEKEGADPEVRHIANSPATLTLPEAHFDLVRPGIAMYGVSPSPEIGTHQEL 246

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+T  A + L+++   G  VSYG        + + +  +GYADG P   SG     
Sbjct: 247 GLRPVMTLAASVALVKRVPEGHGVSYGHHYTTPGATTLGLIPVGYADGVPRHASGR---- 302

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDV 346
                  G   + G +    G+I MD  + D+     I  G    +FGP    +   +D 
Sbjct: 303 -------GPVLVGGRVRTAAGRIAMDQFVVDLGGQ-EIPEGSEAVLFGPGTRGEPSAEDW 354

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A A+GT  Y+++ RIGTR  + 
Sbjct: 355 ARAAGTIAYEIVTRIGTRVPRV 376


>gi|189025906|ref|YP_001933678.1| alanine racemase [Treponema pallidum subsp. pallidum SS14]
 gi|20141182|sp|Q56346|ALR_TREPA RecName: Full=Alanine racemase
 gi|226711066|sp|B2S3S0|ALR_TREPS RecName: Full=Alanine racemase
 gi|189018481|gb|ACD71099.1| alanine racemase [Treponema pallidum subsp. pallidum SS14]
 gi|291060047|gb|ADD72782.1| alanine racemase [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 377

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 96/383 (25%), Positives = 156/383 (40%), Gaps = 33/383 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +  I L  L++N   + + +  AR    VK +AYG G   +A A  + GV  F V  V+E
Sbjct: 5   QALIHLANLRHNLGEIMSRT-RARVCLPVKADAYGHGACDVAQAALSCGVHSFAVACVQE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS----KLMSCGVSHP 123
             +LR    +A I  L      +   + +  +  VIS    +   +    +    G +  
Sbjct: 64  ASQLRAAGVRAPILCLSTPTAEEISSLIEHRVHTVISERAHIALIARALRQSADTGATCG 123

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLE 180
             +++DTG  R+G +  EA              L  + +H + AD   +       +Q  
Sbjct: 124 VHVKIDTGMGRIGCAPDEACALVQMVCATPGLHLEGVCTHFSVADSVRAEDLQYTEMQRA 183

Query: 181 RFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPM 232
            F   + + +    S+      +S+ +L  P  HF + RPG+  YG              
Sbjct: 184 HFMHCVQYIRKSGISIPLVHAANSAALLCHPRAHFDMVRPGLLAYGYAPESVHPAVRSVF 243

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             V+    ++  I+K  AG  VSY    +   ++ + +  IGYADG    LS        
Sbjct: 244 LPVMELVTQVRAIKKIPAGAYVSYQRLWRAHTETHVGILPIGYADGVMRALS-------- 295

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDV 346
               G +  I G   P++G I MD  + D+   L + VGD + +FGP          D +
Sbjct: 296 ---PGLQVCIGGKWYPVVGAICMDQCVVDLGTPLRVTVGDRVTLFGPQDAGGPGQGADVL 352

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A  +GT  Y+LL  IG R  + Y
Sbjct: 353 ASHAGTIPYELLCAIGKRVERVY 375


>gi|85703131|ref|ZP_01034235.1| alanine racemase [Roseovarius sp. 217]
 gi|85672059|gb|EAQ26916.1| alanine racemase [Roseovarius sp. 217]
          Length = 345

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 127/363 (34%), Positives = 181/363 (49%), Gaps = 28/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW +++A++    TAAVVK +AYGLG  K+A +L  AG + FFV   EEG
Sbjct: 6   LTIDLDAITANWRALDAMTAG-ETAAVVKADAYGLGAAKVARSLARAGARHFFVAVAEEG 64

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             LR        I+V  G  PG   +I D +L P+I+S+ Q+    + +     HP+ +Q
Sbjct: 65  AALRDTLGSGPAIYVFSGHMPGDADMIGDMHLTPMINSLEQM---IRHVESLPGHPFGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +D+G NRLG+   E       +  +      LI+SHLACAD+    +N  QL  FR +  
Sbjct: 122 LDSGMNRLGMEPGEWAALRDIALAQ---DPRLIMSHLACADESDHAMNPQQLATFREMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILL   YHF L RPGI LYGG          + VVT +  +I  R 
Sbjct: 179 G-LDVPRSLANTGGILLDAAYHFDLARPGIGLYGGRPFAEA----RAVVTLDIPVIQCRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y       R++ IA  A GYADG    +                 + +    
Sbjct: 234 LAPGETVGYANGFTAPRETRIATVAAGYADGILRAMG-----------PKTSLWAEDIPC 282

Query: 308 PILGKITMDMTMFDITDS-LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           PI G+I+MD+   DITD     +    +Q+ GP   +D +A  + T  Y++L  +G RY 
Sbjct: 283 PIAGRISMDLICVDITDLGHDPK---SLQLLGPYQSIDTLADHADTIGYEILTSLGARYT 339

Query: 367 KFY 369
           + Y
Sbjct: 340 RRY 342


>gi|88810604|ref|ZP_01125861.1| Alanine racemase region [Nitrococcus mobilis Nb-231]
 gi|88792234|gb|EAR23344.1| Alanine racemase region [Nitrococcus mobilis Nb-231]
          Length = 365

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 103/367 (28%), Positives = 164/367 (44%), Gaps = 16/367 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  +DL AL++N       + +AR  AV+K N YG G  ++A AL  A      V+ 
Sbjct: 3   RLARATVDLGALRHNLAVARQAAPSARVIAVLKANGYGHGLLQVAAALAQADAFA--VSC 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E  +LRL   + RI +L G     E  +FD   +  +          +  +       
Sbjct: 61  MAEASRLRLAGYRHRIILLAGYFEPDELPLFDRYALDPVIHAEWQLAPLERSTLQRPLDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG +RLG    +  +      +         ++HLA AD+       +QLE F  
Sbjct: 121 WLKVDTGMHRLGFPAGQVCEVYQRLRSMPSVASVRFMTHLARADNRRDPTTRMQLETFEA 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTVVTAEARI 242
                 G E S+A+S+  L     H Q  RPGI LYG +  I+  +S  +  V T EAR+
Sbjct: 181 ACQGLSG-ERSIANSAATLAWRQTHAQWVRPGIMLYGCSPFIDGLESPALWPVQTLEARL 239

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           + +     G+L+ YGG         + V ++GY DGYP                G    +
Sbjct: 240 VAVNYHRRGDLIGYGGIYACPEAMPVGVVSVGYGDGYPRHA-----------PSGTPLLV 288

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G  V ++G+++MDM   D+  + + +VGD + ++G  + +  VA   GT  Y+LL ++ 
Sbjct: 289 AGREVSLVGRVSMDMLSVDLRSAPNAQVGDLVVLWGESLPVGRVAEQCGTIAYELLCKLT 348

Query: 363 TRYAKFY 369
           +R    Y
Sbjct: 349 SRVQFRY 355


>gi|322506310|gb|ADX01764.1| dadX [Acinetobacter baumannii 1656-2]
          Length = 367

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 143/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R       I +L G+  P          L   I S  Q+ +  +         
Sbjct: 61  LEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL--ACADDPSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         ++H   A AD         Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQNYVQAWERLNNLANVSKITHMTHFSDADADRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVRDLPGERSVSNSAAILRYQDQLKSDYARSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIIAVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|170750293|ref|YP_001756553.1| alanine racemase [Methylobacterium radiotolerans JCM 2831]
 gi|170656815|gb|ACB25870.1| alanine racemase [Methylobacterium radiotolerans JCM 2831]
          Length = 364

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 129/363 (35%), Positives = 188/363 (51%), Gaps = 15/363 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL IDL A+  NW  + A    A  AAVVK +AYG G  ++ PAL+ AG + FFV  + 
Sbjct: 15  ARLTIDLGAIAANWRILAARGAGADCAAVVKADAYGCGIGRVGPALWAAGCRTFFVAHLS 74

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV  R   P+A I+VL G+  G         L PV+ S  +L+ ++            +
Sbjct: 75  EGVAARAALPEAAIYVLNGLPLGAAAAFAAHGLRPVLGSAEELSDWAAFAGNRPPAALHV 134

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             DTG NRLGLS+ EALD            + L++SH   A+ P   VN+ Q+  F  + 
Sbjct: 135 --DTGMNRLGLSVPEALDLA-GDARIAEAGIDLLLSHFVSAETPDDPVNARQIADFARVR 191

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y G+ ASLA+SSGI L       L RPG +L+GG      ++PM+ VV  EA I  +R
Sbjct: 192 AAYPGLRASLANSSGIFLD-GARHDLLRPGYALFGGNPTPGAANPMRPVVRLEATIAQVR 250

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG    Y G+   T  S +A  ++GYADG+P ++SG            G+  + G  
Sbjct: 251 GVAAGATAGYNGRWTATAPSRLATLSLGYADGFPRSISGR-----------GQALVGGVP 299

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            PILG ++MD+ + D+T + +   G    + G  + +D V  A+GT  Y++L  +G+RY 
Sbjct: 300 CPILGSVSMDLIILDVTAAPAARRGAAAVLIGDRLDIDTVGRAAGTIGYEILTGLGSRYV 359

Query: 367 KFY 369
           + Y
Sbjct: 360 RTY 362


>gi|218551070|ref|YP_002384861.1| Alanine racemase 3 [Escherichia fergusonii ATCC 35469]
 gi|218358611|emb|CAQ91259.1| Alanine racemase 3 [Escherichia fergusonii ATCC 35469]
          Length = 388

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 15/360 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+  A+ +N+  +   +  A+  AV+K NAYGLG E IAPALY A  + FFV  + EGV 
Sbjct: 36  INRAAIVDNYRMLARHAAPAQCGAVLKANAYGLGAETIAPALYAANCRIFFVAQLSEGVA 95

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV- 128
           LR   P  A + VL G+ P      F   + P+++S+ Q+  +  L+         +   
Sbjct: 96  LRKILPTDAMVVVLNGVMPEAMVFCFAQQITPLLNSIDQVMAWLTLLETRQQRRAVMIQL 155

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG+  Q+ +        +       IISHLA AD P   +N VQ  R +   + 
Sbjct: 156 DSGMSRLGVMSQQLMRLAAIFRERNWPAPDYIISHLANADRPDHALNMVQHARLQQAKAV 215

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L   +   L RPGI+L+G T +   S  ++ V T    I+ ++  
Sbjct: 216 FPSSRFSLANSCGMFLHLGWREDLCRPGIALFGVT-QPWFSRLLKPVFTLTLTILRVQDV 274

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG  V YG     TR   IA  + GYADG P  +                   +G  +P
Sbjct: 275 PAGTPVGYGSTVTATRPLRIATISAGYADGVPRNM-----------RPPAGVCWRGVRLP 323

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D +       GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 324 VLGRVCMDSFMVDASAVSP-TAGDVVEFIGTGQTLEEVAAACDTIPYEIMTRLGARFQRI 382


>gi|315605945|ref|ZP_07880976.1| D-alanine racemase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315312227|gb|EFU60313.1| D-alanine racemase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 426

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 89/401 (22%), Positives = 143/401 (35%), Gaps = 47/401 (11%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             IDL A+ +N   + A +  A   A VK NAYG G   +A A   AG     V  + E 
Sbjct: 17  ASIDLAAIGHNLKVLRAAAPGALQLATVKANAYGHGLIPVARAALEAGADWLGVAQLAEA 76

Query: 69  VKLRL-------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
             LR            + I                 ++   +S    L          G 
Sbjct: 77  FALREGLDAAGVAREDSPILAWISTSSSDFAAAIAADIDLSVSWTWVLAHICAAARQVGR 136

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPS---SHV 174
                +++DTG +R G +L +               L  +    SH++ ADDPS   +  
Sbjct: 137 PARVHVKIDTGMSRAGSTLADLPTLAAALKAASDDGLIDVVGAWSHMSRADDPSDGGNAS 196

Query: 175 NSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--- 226
            +  +  F   +     +  +     LA++SGIL  P  H+ + R GI LYG +      
Sbjct: 197 TASHVRIFEEGLRILREAGVRPRIRHLAATSGILWHPQTHYDMVRVGIGLYGLSPDPAVA 256

Query: 227 -NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                 +   +T  A +  ++    G  VSYGG         I +  +GY DG     S 
Sbjct: 257 SAADLGLIPALTLCAPLTSVKVIEEGSPVSYGGTWAAPTRRWIGLVPLGYGDGILRAASN 316

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-------------LSIEVGD 332
                  +              P++G++ MD  M D+  +                 VGD
Sbjct: 317 RARVLVHTASGPLS-------APVVGRVCMDQFMIDLGKAAGDAGEATAHAGQPPARVGD 369

Query: 333 YIQIFGP----DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + + G     +   D+ A A+ T NY+++ R+G    + Y
Sbjct: 370 EVILLGNGAGGEPLADEWADAADTINYEIVTRLGAHIPRTY 410


>gi|295395165|ref|ZP_06805373.1| alanine racemase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971927|gb|EFG47794.1| alanine racemase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 384

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 96/392 (24%), Positives = 157/392 (40%), Gaps = 37/392 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S       ID  AL +N   +   +   +  A+VK +AYG G   + PAL  AGV  F
Sbjct: 1   MTSAPLT-AVIDTRALVHNVQLLQERAAGKQLVAIVKADAYGHGVNLVVPALARAGVTHF 59

Query: 61  FVTSVEEGVK-------LRLYTPQA-----RIFVLYGIHPGQEKIIFDTNLIPVISSVPQ 108
              ++ E V        L  +          +               +  +   + S   
Sbjct: 60  GTATIPEAVAVQDILAGLSDHGDDCGESDHTVMCWLYEPNADLSEPVERGIELGVGSPAA 119

Query: 109 LT-FYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
           L   ++   + G +    L+VDTG  R GL+  +              Q+  ++SH ACA
Sbjct: 120 LESIFNAAHTTGKTARIHLKVDTGLGRNGLNSTQLQQVLEQLTTAHGVQVCGVMSHFACA 179

Query: 168 DDPSSHVNSVQLERFRTLIS------HYKGIEASLASSSGILLGPNYHFQLTRPGISLYG 221
           D+P +  N+ Q+ERF   +           +   +A+S  IL          R G+++YG
Sbjct: 180 DEPDNDFNTTQIERFNQAVDTVKATLQIDNLMEHIANSPAILSMDPVPGNAVRAGVAMYG 239

Query: 222 GTDKINKSH----PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
            +      H     +Q  +T  + +   +   AG+  SYG +   +  S  A+ A GY D
Sbjct: 240 LSPFAPVDHAYSEGLQPAMTLVSHVCAAKDVPAGQGASYGLRYTTSASSKFALVAGGYGD 299

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           G P   S                 I+G   P++G I MD  + D+ D+  +  GD + I+
Sbjct: 300 GIPRQAS-----------HKAHVAIQGKAFPVVGSIAMDQMIADVGDA-QVSPGDPVVIW 347

Query: 338 GP-DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           G     +D+ A  +GT NYD++ R+G R  + 
Sbjct: 348 GNGGPHVDEWAQWAGTINYDIVTRLGARVPRV 379


>gi|259416801|ref|ZP_05740721.1| alanine racemase [Silicibacter sp. TrichCH4B]
 gi|259348240|gb|EEW60017.1| alanine racemase [Silicibacter sp. TrichCH4B]
          Length = 345

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 186/365 (50%), Gaps = 25/365 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RLKI+L AL  NW +++A + +  TAAVVK N YGL   ++  AL  AG ++FFV   E
Sbjct: 4   ARLKINLDALAINWRNLDAKT-SCETAAVVKANGYGLESGRVGKALAQAGARNFFVAIAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG+ LR    P   I V  G   G  K++ D  L P+++S+ Q+    +       HP+ 
Sbjct: 63  EGIALRRALGPGPGISVFSGHMEGDAKLLRDFQLTPMLNSLDQML---RHFESMPGHPFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E +     + ++      L++SHLACAD+P   +N  QL+ F  +
Sbjct: 120 VQLDSGMNRLGMEAAEWMAVRDIALDQ---NPVLLMSHLACADEPGHGMNPYQLKNFIEM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ G+LLG +YHF L RPGI LYGG    +       VV  E  +I  
Sbjct: 177 TEG-LNLPRSLAATGGLLLGRDYHFDLCRPGIGLYGGAPYSDA----LPVVELEVPVIQT 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG      RD+ IA  A GYADG                  G   +    
Sbjct: 232 RDLAPGESVGYGNTWIAQRDTRIATIAAGYADGLHRAFQ----------RQGIMAYAGST 281

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P++G+I+MD+   DITD   +    Y+ +      +D +A A+ T  Y++L  +G RY
Sbjct: 282 PCPVVGRISMDLITVDITDLDDVPP--YLSLINEAQTVDVLANAADTIGYEVLTSLGNRY 339

Query: 366 AKFYT 370
           A+ Y+
Sbjct: 340 ARTYS 344


>gi|116628941|ref|YP_814113.1| alanine racemase [Lactobacillus gasseri ATCC 33323]
 gi|238853540|ref|ZP_04643912.1| alanine racemase [Lactobacillus gasseri 202-4]
 gi|282852616|ref|ZP_06261958.1| alanine racemase [Lactobacillus gasseri 224-1]
 gi|311111249|ref|ZP_07712646.1| alanine racemase [Lactobacillus gasseri MV-22]
 gi|122274061|sp|Q046E7|ALR_LACGA RecName: Full=Alanine racemase
 gi|116094523|gb|ABJ59675.1| Alanine racemase [Lactobacillus gasseri ATCC 33323]
 gi|238833836|gb|EEQ26101.1| alanine racemase [Lactobacillus gasseri 202-4]
 gi|282556358|gb|EFB61978.1| alanine racemase [Lactobacillus gasseri 224-1]
 gi|311066403|gb|EFQ46743.1| alanine racemase [Lactobacillus gasseri MV-22]
          Length = 376

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/384 (21%), Positives = 147/384 (38%), Gaps = 34/384 (8%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N  + M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNIENEMQHLEPGQKMLAVVKANGYGHGAVEVAKVADQIGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    ++   + ++  L    K   +  + 
Sbjct: 66  AILDEALELRRADITKTILVLGVVSPEYAPIAAANDISLTVPNLEWLKEAEKYLENSDLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEDKDFIAANKFLENNDNFYIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +        L R GI +YG     N + P       
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHNGIKSDLVRFGIGIYGLNPSSNPNSPDLKSKIA 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LDPALSFESELTHVKTIHQGDGVGYGSTFVADKDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV----- 346
                  K  +     PI+G+I MD  M ++   + +  G  + I   +   DD+     
Sbjct: 301 -------KVKVGNTYCPIVGRICMDQFMVEMPKEMPL--GTKVVIISDNP--DDLNNIKA 349

Query: 347 -ALASGTTNYDLLVRIGTRYAKFY 369
            A    T +Y++   +  R  + Y
Sbjct: 350 AADYVDTIHYEVACLLNDRLPRVY 373


>gi|184156444|ref|YP_001844783.1| alanine racemase [Acinetobacter baumannii ACICU]
 gi|260557641|ref|ZP_05829855.1| alanine racemase [Acinetobacter baumannii ATCC 19606]
 gi|183208038|gb|ACC55436.1| Alanine racemase [Acinetobacter baumannii ACICU]
 gi|260408814|gb|EEX02118.1| alanine racemase [Acinetobacter baumannii ATCC 19606]
          Length = 367

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R       I +L GI  P          L   I S  Q+ +  +         
Sbjct: 61  LEEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPITIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLSIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|332875573|ref|ZP_08443386.1| alanine racemase [Acinetobacter baumannii 6014059]
 gi|193076000|gb|ABO10585.2| alanine racemase 2 PLP-binding, catabolic [Acinetobacter baumannii
           ATCC 17978]
 gi|332736276|gb|EGJ67290.1| alanine racemase [Acinetobacter baumannii 6014059]
          Length = 367

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L GI  P          L   I S  Q+ +  +         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|295111805|emb|CBL28555.1| alanine racemase [Synergistetes bacterium SGP1]
          Length = 383

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 101/380 (26%), Positives = 161/380 (42%), Gaps = 30/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +IDL AL+ N  S+  L     ++ AVVK +AYG G  ++A  L   GV    V  
Sbjct: 10  RTWAEIDLDALEGNVRSLKGLLKPGVKSLAVVKADAYGHGIVEVARKLETCGVDMLAVAY 69

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHP 123
           V   V LR    +  I  L    P    ++++ ++   +  +   L       + G +  
Sbjct: 70  VMAAVTLRKNGIKLPILCLGQSAPSLAPLMWEYDVTQAVGDLENGLALSRAASAAGRTIK 129

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ-----LSLIISHLACADDPSSHVNSVQ 178
             ++VDTG  R+G    E+           L +        + SH A AD        +Q
Sbjct: 130 IHVKVDTGMGRIGFYWPESGWEAVADEMATLCRLPGLEAEGLFSHFANADGDP-EYTRMQ 188

Query: 179 LERFRTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGG---TDKINKSH 230
           + +F         +G+   L   +     L  P  H  + R G+ LYG     +++    
Sbjct: 189 MAKFAAARQALADRGVTFRLGHIAASLGVLRYPEAHLDMGRFGLVLYGYASSDEEVESPA 248

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+T +ARI  +R+   G  + YGG   L RDS++AV   GYADGYP  LS   S  
Sbjct: 249 ELKPVMTLKARIAAVRELPKGAKIGYGGTAVLKRDSVLAVLPTGYADGYPRALSNRMS-- 306

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                     +I   + P++G++ MDM M D+TD   +  GD   +    + L   A  +
Sbjct: 307 ---------VYIHDRLCPVVGRVCMDMFMADVTDVPGVRAGDEAVLLDGRLMLK--AALA 355

Query: 351 G-TTNYDLLVRIGTRYAKFY 369
           G T  ++LL  I  R  + +
Sbjct: 356 GHTIIHELLSCIMPRVPRVF 375


>gi|239503097|ref|ZP_04662407.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter baumannii
           AB900]
          Length = 367

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L GI  P          L   I S  Q+ +  K         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVEKHPYSA-QFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|227431178|ref|ZP_03913233.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227353073|gb|EEJ43244.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 373

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 100/378 (26%), Positives = 167/378 (44%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L IDL A++ N   +   +G  R  AVVK NAYG G +++  AL+  GV DF V +
Sbjct: 10  RPTWLDIDLKAIQTNAKLIMRHAGAQRLIAVVKANAYGHGAKQVVGALFEVGVYDFAVAT 69

Query: 65  VEEGVKLRLYTPQARIFVL--YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + EGV LR Y PQA I +         Q +++ +  L P + +   L      +  G   
Sbjct: 70  IGEGVDLRKYYPQAEINIFLLGVQDVTQTEVMVENRLSPAVGTTEWLDEAVNYIKDGQKL 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R+G     A++  ++     +  QL+ + +H A ADD + +    Q++R
Sbjct: 130 DIQLAVDTGMGRMGAHSASAVEDMYHLIQGTEKFQLAGVFTHFATADDNNQNYYDEQVQR 189

Query: 182 FRTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGT---DKINKSHPMQTV 235
           F   +      +  L    S S I      +    R G  LYG      +     P++  
Sbjct: 190 FYQWVQSAGIPKQYLHLANSGSAIWHHDEIYTDTIRVGSVLYGYNPGAPEKKMPLPLKPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  ++++  + +   GE VSYG      +   IA   IGYADGY   +SG+         
Sbjct: 250 LQLKSKLGSVHQLTTGESVSYGATYTAEKPQWIATLPIGYADGYLRRMSGM--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              K  + G++  ++G++TMD  +  +     +  G  + + G      I +++VA  + 
Sbjct: 301 ---KVLVDGHIEHVIGRVTMDQIVITLKQKYPV--GKTVTLVGLEGENQISVEEVAEYAQ 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L   G R  + Y
Sbjct: 356 TIPHEILTNFGARLPRIY 373


>gi|323516181|gb|ADX90562.1| alanine racemase [Acinetobacter baumannii TCDC-AB0715]
          Length = 367

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R       I +L G+  P          L   I S  Q+ +  +         
Sbjct: 61  IEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVILPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|289209091|ref|YP_003461157.1| alanine racemase [Thioalkalivibrio sp. K90mix]
 gi|288944722|gb|ADC72421.1| alanine racemase [Thioalkalivibrio sp. K90mix]
          Length = 367

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 155/379 (40%), Gaps = 30/379 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     ++L     AL++N      L+      +V+K   YG G    A AL +      
Sbjct: 1   MRRAASIQL--HPEALRHNLSVARRLAPAVPMWSVIKAEGYGHGLLWAAQALAD-DSDGL 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V+ V E   LR    +  + VL G     +     + +L PV+    QL       +  
Sbjct: 58  AVSQVCEARALRAAGFEGALLVLQGPRDLSEVHACTEFDLQPVLHHSAQLDHLE--AASV 115

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           V     ++++TG NRLG    +A                   ++H+ACAD+P    N+ Q
Sbjct: 116 VLPVVWIKLNTGMNRLGFEPAQAPKVATRLQAAGHGQGGLHWMTHMACADEPEHPQNARQ 175

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQ----LTRPGISLYGGTD--------KI 226
           L+ F T ++ + G  +   S++                 RPGI LYG             
Sbjct: 176 LDAFATTVAAFPGHRSVANSAALFAGWGRGGAAAGEYWGRPGIMLYGAHPASVPAEHLPE 235

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                ++  +T +A II  +    G  V YG          + + A+GYADGYP      
Sbjct: 236 GPDGDLRPAMTVQAPIIATQPLAPGSTVGYGATWTADAPGRVGIVAMGYADGYPRHA--- 292

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                     G    + G + P++G+++MDM   D++   + +VGD + ++G  + ++ V
Sbjct: 293 --------PSGTPVLVNGELCPLIGRVSMDMLAVDLSGVPAAQVGDRVTLWGEGLPVERV 344

Query: 347 ALASGTTNYDLLVRIGTRY 365
           A A+GT +Y+LL R+  R 
Sbjct: 345 ARAAGTISYELLTRVADRL 363


>gi|262281362|ref|ZP_06059143.1| alanine racemase 2 PLP-binding [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257188|gb|EEY75925.1| alanine racemase 2 PLP-binding [Acinetobacter calcoaceticus
           RUH2202]
          Length = 367

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 143/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L GI  P          L   I S  Q+ +  K         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVQKHPYPAK-FD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 ICLKMNSGMNRLGFKPQHYVQAWERLNNLANVSKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  +I    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEDIIKDLPGERSVSNSAAILRYQDQLKSDYARSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++   A E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLDANESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   + +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIENAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|325675498|ref|ZP_08155182.1| D-alanine racemase [Rhodococcus equi ATCC 33707]
 gi|325553469|gb|EGD23147.1| D-alanine racemase [Rhodococcus equi ATCC 33707]
          Length = 414

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 167/380 (43%), Gaps = 28/380 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL A+ +N   +   +G A   AVVK +AY  G   +A A   AG  +  VT++ 
Sbjct: 38  AEAVIDLDAVAHNIGILREHAGGATVMAVVKADAYNHGAVPVARAALAAGAGELGVTTLA 97

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           EG++L+     A +                  +   +SS        +     G +    
Sbjct: 98  EGLELKNAGITAPVLSWLHTADSDFAPAVAAGVELGLSSPRHLAAVAAAARQVGTAATVT 157

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSF---NKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           ++VDTG NR G+S +E  DF  +      +   +   + SHLA AD+P   V   Q ERF
Sbjct: 158 VKVDTGLNRNGVSREEWTDFLKDLARVEAEGAVRFKGVFSHLAHADEPHHPVIDDQRERF 217

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
            + +   + I      A L++S+  L  P+  F + RPGI++YG +   +  +  ++ V+
Sbjct: 218 TSALEDAERIGLVPEAAHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPDLGTFGLRPVM 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +R+ L++K  AGE VSYG       D+ +A+  +GYADG P  L G           
Sbjct: 278 TFRSRVALVKKVAAGEGVSYGHTWVAPHDTTVALLPVGYADGIPRALGGRF--------- 328

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPD------IKLDDVALA 349
             + ++     P +G++ MD  + D+  D   +  GD    FG            D A A
Sbjct: 329 --EVWLGDDRRPGIGRVCMDQVVVDLGPDGAGVREGDTAVFFGDGDGDRGVPHAQDWADA 386

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y+++  +  R  + Y
Sbjct: 387 LDTIHYEVVTSVRGRTIRTY 406


>gi|78189593|ref|YP_379931.1| alanine racemase region [Chlorobium chlorochromatii CaD3]
 gi|78171792|gb|ABB28888.1| alanine racemase [Chlorobium chlorochromatii CaD3]
          Length = 366

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 92/371 (24%), Positives = 156/371 (42%), Gaps = 25/371 (6%)

Query: 11  IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L  L+ N  ++ A L+G A    +VK NAYG     +A  L   G+ +F V ++ E +
Sbjct: 6   ISLEHLRGNVRALQAHLNGRAHIMGIVKANAYGHNVHFVASTLETCGIHNFGVANIHEAL 65

Query: 70  KLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           +L+        A I       P       +  +   +           + +         
Sbjct: 66  ELKQGGALQKPATIIAFASPLPSHLPYFIEHGITMTLCDHATFVAARDIAAALERPLQVH 125

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++D+G  RLG++  EA+            +L+ + +H A +    +     QL  F+T+
Sbjct: 126 VKIDSGMGRLGVAPHEAMALLQAVDASPFLELTGVYTHFADS-ATPNSFTHQQLAIFKTI 184

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTA 238
            + Y+      I    A+S  +L        + RPGI LYG            +Q V+  
Sbjct: 185 AAEYEHAAQRTICKHTANSGALLSLQASWCDMVRPGILLYGYHPSQECPTQLNVQPVMQV 244

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +A+++ I+K  AG  +SY    +   +  IA  A GYADGY   LS              
Sbjct: 245 QAKVMFIKKVAAGTSISYNRTWQAPTERFIATIAAGYADGYHRLLSN-----------NA 293

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDL 357
              I G   P +G +TMD  M D+  S S++VGD   +FG D +  +++A  + T +Y++
Sbjct: 294 AVLINGKRYPQVGTVTMDQIMVDLGSSHSVQVGDSAVLFGWDTLSANELAAQAHTISYEM 353

Query: 358 LVRIGTRYAKF 368
           L  +  R  + 
Sbjct: 354 LCAVSARVKRR 364


>gi|307565241|ref|ZP_07627735.1| alanine racemase [Prevotella amnii CRIS 21A-A]
 gi|307346054|gb|EFN91397.1| alanine racemase [Prevotella amnii CRIS 21A-A]
          Length = 849

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 90/371 (24%), Positives = 152/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+++L A+ +N +   +L     +   ++K +AYG G  +IA  L +  V    V   +E
Sbjct: 490 LEVNLNAIVDNLNWYRSLMKPQTKLVCMIKADAYGAGSVEIAKTLQDHRVDYLAVAVADE 549

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHPYA 125
           GV LR       + ++        K +FD +L P + S   L    K          P  
Sbjct: 550 GVTLRKNGITNNVMIMNPEMSS-FKTLFDFDLEPEVYSFRLLEALIKAAEKEGITGFPVH 608

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLA-CADDPSSHVNSVQLERFR 183
           +++DTG +RLG    ++  +  H    +       + SH      D     +S Q   F+
Sbjct: 609 IKIDTGMHRLGFDPVKDIDELIHRLQKQSAIIPRSVFSHFVGSDSDSFDDFSSQQFALFK 668

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                        I   + +S+GI   P     + R G+ LYG   + NK     + +  
Sbjct: 669 QGADKLQGAFPHKILFHMDNSAGIEHFPYRQMDMCRLGLGLYGINPRSNKCFNTISEL-- 726

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ IR    G+ V Y  +  ++ DS+IA   IGYADG    L              G
Sbjct: 727 KTTILQIRSVPKGDTVGYSRKGVISHDSMIAAIPIGYADGLNRHLGNRR----------G 776

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G I MD+ M D+T     + GD ++IFG ++ +  ++    T  Y++L
Sbjct: 777 YCLVNGKKAEYVGNICMDVAMIDVTGI-DCKEGDQVEIFGKNLPVTVLSDILDTIPYEVL 835

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 836 TNVSNRVKRVY 846


>gi|16762331|ref|NP_457948.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|29143819|ref|NP_807161.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|213052147|ref|ZP_03345025.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213427047|ref|ZP_03359797.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|289830029|ref|ZP_06547478.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
 gi|20137366|sp|Q8Z300|ALR3_SALTI RecName: Full=Alanine racemase 3
 gi|25291653|pir||AD0937 alanine racemase [imported] - Salmonella enterica subsp. enterica
           serovar Typhi (strain CT18)
 gi|16504635|emb|CAD09518.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29139455|gb|AAO71021.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
          Length = 368

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 107/360 (29%), Positives = 171/360 (47%), Gaps = 15/360 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P          + P+++SV Q +T+ +   +     P  +Q+
Sbjct: 76  LRNILSADAMVVLLNGVMPQAMPFCCAQQITPLLNSVDQVMTWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKKA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 196 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLTILRVQDV 254

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G  + YG     TR   IA  + GYADG P  L                   +G  +P
Sbjct: 255 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPPAGVCWRGVRLP 303

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 304 VLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAACDTIPYEIMARLGARFRRI 362


>gi|302670570|ref|YP_003830530.1| alanine racemase Alr [Butyrivibrio proteoclasticus B316]
 gi|302395043|gb|ADL33948.1| alanine racemase Alr [Butyrivibrio proteoclasticus B316]
          Length = 387

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 158/386 (40%), Gaps = 36/386 (9%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVE 66
            +ID+ A+K N  SM        R  AVVK +AYG G  +IA +L N   +  + V + E
Sbjct: 10  ARIDIDAIKYNLESMRKNIPDGTRIMAVVKTDAYGHGATRIALSLENVDYIWGYAVATAE 69

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS----- 121
           E  +LR       I VL    P   + +    + P +  +      S      V      
Sbjct: 70  EAFELRDAGAIKPILVLGYTFPYAYRRMLLEGVRPSVFRMDMAQELSDCGQELVDSGELT 129

Query: 122 --HPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 + VDTG +R+G++  E   DF     N    Q+  I +H A AD+        +
Sbjct: 130 ELPCVHIAVDTGMSRIGVTPDEKGADFVSKVMNMPGIQVEGIFTHFARADEADLSNARER 189

Query: 179 LERFRTLISHYKGIE------ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
            + F   +   +            A+S+ I+  P     + R G+++YG     +    +
Sbjct: 190 EKVFADFVKSVEETTGKKIPLHHCANSASIISVPESSMDMVRAGVTMYGMWPSEDVPRDI 249

Query: 233 ---QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
              +  +   + I++I++  AG  VSYGG     + + IA   +GY DGYP +LS     
Sbjct: 250 VSLKPTMELISHIVMIKEVPAGTPVSYGGTYVTDKPTKIATIPVGYGDGYPRSLSN---- 305

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF------GPDIKL 343
                   G   I G+   I+G++ MD  M D+TD   +  GD + +       G +I  
Sbjct: 306 -------KGYVLINGHHANIIGRVCMDQFMVDVTDIHYVLEGDEVVLLGRDKNTGEEISA 358

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
           + +   SG  NY+L      R  + +
Sbjct: 359 ELLGEMSGRFNYELTCDFNKRIPRVF 384


>gi|198284522|ref|YP_002220843.1| alanine racemase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666734|ref|YP_002427188.1| alanine racemase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|254802357|sp|B7J911|ALR_ACIF2 RecName: Full=Alanine racemase
 gi|254802358|sp|B5EP95|ALR_ACIF5 RecName: Full=Alanine racemase
 gi|198249043|gb|ACH84636.1| alanine racemase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518947|gb|ACK79533.1| alanine racemase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 364

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 156/371 (42%), Gaps = 19/371 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL++N   +   +  AR  A VK NAYG G    AP L  AGV  F V S
Sbjct: 3   RPIVADISAAALRHNVAVVREHAPRARIMAAVKANAYGHGVTLCAPVLAEAGVDAFAVAS 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   L     +  I +L G     E  +       ++    +   + +  +   +   
Sbjct: 63  LEEAEALHALGLERPICLLGGPFDADEVSVAAERAYLLVIHEQRQLQWLETRAADAALRL 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VDTG +RLG + +               ++  ++SHLA +D P    N  Q   F  
Sbjct: 123 FIKVDTGMHRLGFAPERLPALFAALQRHPRWEVLGLMSHLARSDTPDDPFNRQQAGVFAD 182

Query: 185 LISHYKGI---EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTA 238
            I+H   +   + SLA+S G+L  P  H    RPG+ LYG +    +      +Q V++ 
Sbjct: 183 AIAHVGHVTAGQHSLANSGGVLALPFTHQYWVRPGLMLYGLSPFAGRRGSEIGLQPVLSW 242

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + ++ IR+   G+ + YG   +      + V A GY DGYP  L             G 
Sbjct: 243 RSAVVAIRELGPGDWLGYGAAWQAPARCRVGVVAAGYGDGYPRHLG-----------CGA 291

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYDL 357
              + G     L +++MDM   D+T     ++G  + + G     L+ +A   GT +Y++
Sbjct: 292 PVTVAGQTTRTLARVSMDMLFVDLTAV-EADIGAPVVLMGAGGPPLESLAAELGTISYEM 350

Query: 358 LVRIGTRYAKF 368
             R+  R  + 
Sbjct: 351 SCRMQMRVPRR 361


>gi|291542822|emb|CBL15932.1| alanine racemase [Ruminococcus bromii L2-63]
          Length = 710

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 106/374 (28%), Positives = 167/374 (44%), Gaps = 29/374 (7%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++IDL  L++N  ++   +       AVVK  AYG G  +I+  L   GV+ F V +++E
Sbjct: 345 IEIDLNNLEHNVKTLRKAMPPKCELMAVVKAQAYGHGAYEISTHLEKIGVRAFAVATIDE 404

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G+ LR Y  +  I +L      +   +   NLI    ++    + + L   GV     ++
Sbjct: 405 GISLRKYGIRGEILILGYTSIDRASELKKYNLIQ---TLISFEYANALNRQGVMVNAHIK 461

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--VNSVQLERFRTL 185
           +DTG +RLG+   + LD       K L    +                    Q++ F  L
Sbjct: 462 IDTGMHRLGIPSADFLDVEKVFTMKNLNVCGIFTHLCCSDSSMPDDIAFTRGQIDGFYNL 521

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHPMQTVV 236
           I H K       +  + SS G L  P       R G++LYG      D       ++ V+
Sbjct: 522 IDHLKKTGINIPKLHIQSSYGFLNYPELKCSYVRTGVALYGVKSLPDDNTELLLDLRPVL 581

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + ++R++LIR+   G+ V YG      R+S IA+  IGY DG+P +LS            
Sbjct: 582 SLKSRVVLIRQIEKGDSVGYGRSFVAERNSRIAILPIGYGDGFPRSLSNG---------- 631

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
            G+  I  Y+VP++G+I MD    DITD+  I  GD   +       D+  D VA  S +
Sbjct: 632 NGRALIGQYIVPVIGRICMDQLAIDITDAEGIAAGDIATLIDTDGCTDLSADVVAKNSNS 691

Query: 353 TNYDLLVRIGTRYA 366
            + +LL R+G R  
Sbjct: 692 ISNELLCRMGERLP 705


>gi|293380353|ref|ZP_06626424.1| alanine racemase [Lactobacillus crispatus 214-1]
 gi|290923036|gb|EFD99967.1| alanine racemase [Lactobacillus crispatus 214-1]
          Length = 376

 Score =  248 bits (634), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 143/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N    M  L+   +  AVVK NAYG G  ++A      G     V
Sbjct: 6   HRPAVVKVNLGAIRRNIKNEMKHLATGQKMLAVVKANAYGHGAVEVAKIAIEEGAAGLCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++E ++LR       I VL  + P    I    N+   I ++  L    K +    + 
Sbjct: 66  AILDEALQLRHADIVKPILVLGVVSPEYAPIAAANNVSLTIPNLEWLKEAEKYLEKEQLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               + VD+G  R+G +  E     +             + +H A AD         Q+E
Sbjct: 126 LKVHIGVDSGMGRIGFNEDEDFIAANKFLQNNDNFYVEGMFAHFASADSADDTYFKHQVE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +   +      R GI +YG     N   P       
Sbjct: 186 KFAHMRSLLTVKPKWIHVDNTAASIFNKDVPSDCVRFGIGIYGLNPSSNPDSPDLKSSIS 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHEGDGVGYGSTFVADQDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I   D      +   A
Sbjct: 301 -------KVKLGDEYCPIVGRICMDQFMVKMPKKMPL--GTKVVIISNDPTAPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|164688105|ref|ZP_02212133.1| hypothetical protein CLOBAR_01750 [Clostridium bartlettii DSM
           16795]
 gi|164602518|gb|EDQ95983.1| hypothetical protein CLOBAR_01750 [Clostridium bartlettii DSM
           16795]
          Length = 389

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 92/385 (23%), Positives = 162/385 (42%), Gaps = 36/385 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              ++IDL+  K+N   +  L   + +   VVK NAYG G   +A    + G++ F V  
Sbjct: 18  RAWVEIDLSKFKHNIEVIKELLHDDVQIVGVVKANAYGHGDVVVAKYFESLGIKYFAVAC 77

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE +KLR    +  I +L      Q+  +   +L   +++     +  +L     +   
Sbjct: 78  IEEAIKLREGGIKGDIIILGWTPSCQKDDLIKYDLCQTLANE---AYAEELSKLPGTVRG 134

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLER 181
            ++++TG NRLG   +E +D     +     ++  I SHL+ +D            Q+  
Sbjct: 135 YVKLNTGMNRLGE-PKEHMDLIEKIYTLDNIKVEGIFSHLSRSDSKLEADIVFTKQQIAN 193

Query: 182 FRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYG--------GTDKINK 228
           F  +I+  K          L +S GI+   + H+ L RPGI LYG          D +  
Sbjct: 194 FDYVINKLKADGFELGNVHLQNSYGIVTYRDLHYDLARPGIILYGVPSDPLDDTLDNLPN 253

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
               +  ++   ++ +++    G+ V YG     T    +A   IGYADG    +S  D 
Sbjct: 254 GMKFEAPLSLRCKVAMVKDVTPGQSVGYGNNFTATETIKVATVTIGYADGLSRLVSKKDM 313

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                     K  + G     +G + MD  M D++    ++ GD + + G D    + ++
Sbjct: 314 ----------KVLVNGKYARQIGNVCMDQMMIDVSGI-DVKEGDTVTLIGQDGDNYLSVN 362

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
            ++L S T   + L  IG R  + Y
Sbjct: 363 QISLLSNTITNETLSVIGERVKRVY 387


>gi|326794048|ref|YP_004311868.1| alanine racemase [Marinomonas mediterranea MMB-1]
 gi|326544812|gb|ADZ90032.1| Alanine racemase [Marinomonas mediterranea MMB-1]
          Length = 373

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 93/377 (24%), Positives = 162/377 (42%), Gaps = 25/377 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L+  IDL A+K N+     L    +  AVVK +AYG G   +A  L +  V  F V +
Sbjct: 3   RPLKAIIDLEAIKINYQFSKKLHPTCKALAVVKSDAYGHGAVDVATYLDD-DVDAFAVAA 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR     + I +L G+    E  + +      +                +   +
Sbjct: 62  IEEALQLREADVTSPILLLEGVFEQNEWPLCEELGFWCVIENTTQLDGLLNAQSKIEKVF 121

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
              +DTG +RLGL+  +            L +  ++++H +CADD SS     QL  F  
Sbjct: 122 VK-LDTGMHRLGLNSLQVEHVVDTLKASGLVEEVVLMTHFSCADDLSSLETIKQLTLFEE 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEAR 241
                  +  S+A+S+ I+          RPGI LYG +  +        ++  +   ++
Sbjct: 181 ANRTVGHLTTSVANSAAIMKWSVPEGGWIRPGIMLYGISPFVGVTGTQLGLKPAMQLVSK 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R    G+ V Y  Q        IA  A+GY DGYP +              G    
Sbjct: 241 VISVRDVNIGDTVGYSQQYTAEHPHQIATVAVGYGDGYPRSSEN-----------GTPVA 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS---------IEVGDYIQIFGPDIKLDDVALASGT 352
           + G    + G+++MDM    +++  S         I++G+ ++++G  + +++VA  SGT
Sbjct: 290 LSGDTAELAGRVSMDMITVKLSNQASSERPHQERKIQLGEEVELWGEQVPVEEVAYRSGT 349

Query: 353 TNYDLLVRIGTRYAKFY 369
             Y+L+ R+  R  + Y
Sbjct: 350 IGYELVTRMTQRPMREY 366


>gi|113953241|ref|YP_729636.1| alanine racemase [Synechococcus sp. CC9311]
 gi|113880592|gb|ABI45550.1| alanine racemase [Synechococcus sp. CC9311]
          Length = 393

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 107/379 (28%), Positives = 165/379 (43%), Gaps = 26/379 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +   L++  +A++ N  S+   L  +    AVVK + YG G E +A A    G   F V
Sbjct: 23  RQRAWLEVSDSAIEANARSLKRHLGPHCDLMAVVKADGYGHGAETVAKASVRGGATSFGV 82

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
            +++EG+ LR       + VL     P   +      L+P +SS+ +      L    G 
Sbjct: 83  ATLQEGIDLRNAGLDQPVLVLGHLSQPDDLRACLQWRLMPTLSSMREALLCQNLADSSGR 142

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS----HVNS 176
             P  L+VDTG  RLG   ++     H         LS I SHLA AD         V  
Sbjct: 143 RFPVQLKVDTGMTRLGCDWKDGKRLAHAIQQLDQLSLSGIYSHLALADGERDGPAAQVTK 202

Query: 177 VQLERFRTLISH--YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPM 232
           +Q +RF ++        ++  LA+S+G L     H  L R G++LYG     +      +
Sbjct: 203 LQEDRFESITRELRSPTLKRHLANSAGTLRDTGLHHDLVRVGLALYGHCPSEHLDGILNL 262

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ +A++ LIR+  AG  VSYG +    R S +AV +IGYADG    LSG       
Sbjct: 263 EPAMSVKAKVSLIREVPAGVGVSYGHRFVTQRPSRLAVVSIGYADGVSRCLSGRI----- 317

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                      G  +P +G ITMD  + D T+   +E GD + + G D    I     A 
Sbjct: 318 ------HALHAGQTLPQVGAITMDQLILDATEHRGLESGDVVTLLGRDGEETISPRTWAQ 371

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            + +  +++L     R  +
Sbjct: 372 LADSIPWEVLCSFKHRLPR 390


>gi|123969267|ref|YP_001010125.1| alanine racemase [Prochlorococcus marinus str. AS9601]
 gi|123199377|gb|ABM71018.1| putative Alanine racemase [Prochlorococcus marinus str. AS9601]
          Length = 399

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   AL+ N  ++   LS N +  AVVK + YG   + ++      G     V 
Sbjct: 26  QRAWIEVRGKALETNVRNLRSKLSKNCQFMAVVKADGYGHDAKVVSEYAIRGGASQLGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EGVKLR +  +  I +L  ++      I F  +L+P ISS+ +    + +    G+ 
Sbjct: 86  TLKEGVKLRSFGVKKPILILGNLYTKRDLIISFKNDLMPTISSIRECLICNNIGKQFGLK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L+VDTG +RLG      +       + +   +  I SHL+ AD+        +  +
Sbjct: 146 FSLHLKVDTGMSRLGFEYSRFIQNFEKIKSFENILIEGIYSHLSSADEDNALDPKSITQL 205

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q  +F        +     I+  LA+S+ +LL  ++HF + R G+S+YG +   KI+K+ 
Sbjct: 206 QRLKFNELLKQINLDRNNEIKIHLANSAAMLLNKDFHFNMVRVGLSMYGYSPLTKIDKNL 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  + ++  IR    G  VSYGG+    R + +AV +IGYADG P  LSG     
Sbjct: 266 SLEPALFLKVKVAFIRTIEPGVNVSYGGKFVSCRKTKLAVLSIGYADGVPRNLSGKI--- 322

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                   K   K  + P +G ITMD  M DIT S  I+VG  + + G D    I   D 
Sbjct: 323 --------KVIYKNKLYPQVGSITMDQMMVDITGSNEIKVGSTMILLGSDGDKTITPIDW 374

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  S T  +++L     R  + 
Sbjct: 375 AKESDTIPWEILCSFKNRLPRV 396


>gi|169797698|ref|YP_001715491.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter baumannii
           AYE]
 gi|213155508|ref|YP_002317553.1| alanine racemase [Acinetobacter baumannii AB0057]
 gi|215485052|ref|YP_002327293.1| alanine racemase [Acinetobacter baumannii AB307-0294]
 gi|301346049|ref|ZP_07226790.1| alanine racemase [Acinetobacter baumannii AB056]
 gi|301511955|ref|ZP_07237192.1| alanine racemase [Acinetobacter baumannii AB058]
 gi|301596084|ref|ZP_07241092.1| alanine racemase [Acinetobacter baumannii AB059]
 gi|332853589|ref|ZP_08434841.1| alanine racemase [Acinetobacter baumannii 6013150]
 gi|332869280|ref|ZP_08438691.1| alanine racemase [Acinetobacter baumannii 6013113]
 gi|169150625|emb|CAM88534.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter baumannii
           AYE]
 gi|213054668|gb|ACJ39570.1| alanine racemase [Acinetobacter baumannii AB0057]
 gi|213988697|gb|ACJ58996.1| alanine racemase [Acinetobacter baumannii AB307-0294]
 gi|332728553|gb|EGJ59926.1| alanine racemase [Acinetobacter baumannii 6013150]
 gi|332732837|gb|EGJ64051.1| alanine racemase [Acinetobacter baumannii 6013113]
          Length = 367

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R       I +L G+  P          L   I S  Q+ +  +         
Sbjct: 61  LEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLVNVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLSIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|332528049|ref|ZP_08404082.1| alanine racemase [Rubrivivax benzoatilyticus JA2]
 gi|332112622|gb|EGJ12415.1| alanine racemase [Rubrivivax benzoatilyticus JA2]
          Length = 362

 Score =  248 bits (634), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 88/375 (23%), Positives = 148/375 (39%), Gaps = 29/375 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   + + AL +N     A + +AR  AVVK NAYG G E+    L   G   F +  
Sbjct: 3   RPIEALVHVPALAHNLQRARAQAPDARVWAVVKANAYGHGIERAYDGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  +LR    +  I +L G+  P   ++    +L   +    Q+ + +        H 
Sbjct: 61  LDEAERLRTLGWRGPILLLEGVFEPRDLELCSRLDLWHAVHCDEQIDWLAAHK-THRPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG +                      I+H + AD P     + Q+  F 
Sbjct: 120 VFLKMNSGMNRLGFTPAAFRGAWARLGALPQVDEISAITHFSDADGPRGI--AHQIAAFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV----VTAE 239
                  G E  L++S+ +L          R GI LYG      +           +T  
Sbjct: 178 AATQDLPG-ERCLSNSAALLRH-GVKNDWVRAGILLYGSAPDFPEHDIAHWDLQPTMTLR 235

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +RII  +   AG+ V YG          + + A GYADGYP                G  
Sbjct: 236 SRIIATQTLAAGDTVGYGSSFTAPGPMRVGIVACGYADGYPRLC-----------PTGTP 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI-----KLDDVALASGTTN 354
             + G     +G+++MDM   D+++     +G  + ++G         +D+VA A+GT  
Sbjct: 285 ALVNGRRTRTIGRVSMDMLEVDLSELPDAGIGSEVTLWGRGPGGSVLPIDEVARAAGTIG 344

Query: 355 YDLLVRIGTRYA-KF 368
           Y+L+  +  R   + 
Sbjct: 345 YELMCAVAPRVTMRV 359


>gi|169632127|ref|YP_001705863.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter baumannii
           SDF]
 gi|226711023|sp|B0VNF6|ALR_ACIBS RecName: Full=Alanine racemase
 gi|169150919|emb|CAO99526.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter
           baumannii]
          Length = 367

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EE  ++R       I +L G+  P          L   I S  Q+ +  +         
Sbjct: 61  LEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G +RLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VFLKMNSGMSRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|291515605|emb|CBK64815.1| alanine racemase [Alistipes shahii WAL 8301]
          Length = 789

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 95/371 (25%), Positives = 157/371 (42%), Gaps = 22/371 (5%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L++DL A+ +N +   +      R  A+VK  +YG G  ++A  L + GV    V   +E
Sbjct: 428 LEVDLDAMIHNLNYFRSKLDFRTRLVAMVKAGSYGAGDFEVAQMLQHQGVDYLAVAFADE 487

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PYAL 126
           GV LR       + VL       +++I +     + S      F   +   G +  P  +
Sbjct: 488 GVLLRERGITMPVVVLNADADSFDQMIANRLEPEIYSFRSLADFADAVSHAGETRYPVHI 547

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTL 185
           ++DTG +RLG    E              +++ + SHL CAD P        Q+ R+  +
Sbjct: 548 KLDTGMHRLGFMEGEIGRLCEVLPTLPAVKVASVFSHLNCADMPGEDAYTREQIARYDRM 607

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            +         +    A+S+ I   P   F + R G+ LYG     N      + +  + 
Sbjct: 608 SAAVAASLPYSVIRHTANSAAIERFPEARFDMCRLGLGLYGFGWVHNAGLRPVSAL--KT 665

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI+ I++  AG+ V YG   KL R ++ A   IGYADG    L                 
Sbjct: 666 RIVQIKRLEAGDAVGYGRAGKLLRPTVTATVPIGYADGLDRHLGCGRWS----------M 715

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--KLDDVALASGTTNYDLL 358
            + G   PI+G++ MD  M DITD   +  GD + +F  +    L+ +A    T  Y+++
Sbjct: 716 RVAGRPAPIVGRVCMDSCMIDITDIPGVGEGDEVTVFSAEPGNDLETMARVLDTIPYEIM 775

Query: 359 VRIGTRYAKFY 369
             + +R  + Y
Sbjct: 776 TSVSSRVKRIY 786


>gi|291087150|ref|ZP_06345528.2| alanine racemase [Clostridium sp. M62/1]
 gi|291075783|gb|EFE13147.1| alanine racemase [Clostridium sp. M62/1]
          Length = 414

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 96/384 (25%), Positives = 153/384 (39%), Gaps = 37/384 (9%)

Query: 11  IDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I L  ++ N   + A L        VVK + YG G  + A A     V  + V + +E +
Sbjct: 20  IHLDRIEQNMKEIAAGLPEGTAVIGVVKADGYGHGAAETA-AAIEPYVSGYAVATADEAL 78

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQV 128
           +LR       + VL  +   + + +   ++ PVI        +SKL    G+     L V
Sbjct: 79  ELRKSGVSLPVLVLGSVRDSRFRELLAADVRPVIFEEETAEAFSKLAGEAGIRGSVHLAV 138

Query: 129 DTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           D G +R+GL   +E+L+      +     +  + +H   AD+    V   Q E FR   +
Sbjct: 139 DAGMSRIGLKPSEESLEMIDRISSLPGLFIEGLFTHFPRADEEDKAVTKRQFEDFRNFAA 198

Query: 188 H-----------YKGIEASLASSSGIL---LGPN-YHFQLTRPGISLYGGTDKINKSHPM 232
                        K +     +S+GI+     P        R GI +YG           
Sbjct: 199 QVSELLTKKEQGRKKLICHCMNSAGIIDSHRMPEGMEMDAVRAGICIYGLYPSGEVDRNR 258

Query: 233 Q---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 +  ++ I  I++   G  VSYGG     R   +A    GY DGYP  LSG    
Sbjct: 259 IRLLPAMELKSYITYIKEIEPGTAVSYGGTFVARRPMRVATVCAGYGDGYPRGLSGR--- 315

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                   G+  I+G    ILG+I MD  M D+T+    E  D + + G     +I +++
Sbjct: 316 --------GEVLIRGKRAKILGRICMDQFMADVTEIPEAEKWDTVTLVGRDGKEEITMEE 367

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A   G  +Y++   IG R  + Y
Sbjct: 368 LAAQCGGFHYEIPCLIGKRVPRIY 391


>gi|331090918|ref|ZP_08339761.1| alanine racemase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330405472|gb|EGG85005.1| alanine racemase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 369

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 31/377 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              L+IDL  +K N + +  +        AV+K NAYG G   +   L   G+  F V +
Sbjct: 2   RAWLEIDLEKIKWNVNCLRNMMPSGCEMMAVIKANAYGHGAVPVGKMLNGMGIYSFAVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V+EG++LR       I +L      + + +   +LI    ++    +  ++  CG S   
Sbjct: 62  VDEGIELRENGIIGDILILGYTDLKRMEEVVRYDLIQ---TIVDERYGEEMNKCGFSIQA 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLER 181
            L++D+G +RLG+ L E ++ T   FN +  ++  + +HL  +D            Q+E+
Sbjct: 119 ELKIDSGMHRLGV-LAENIEETEKVFNLQNLRIKGMFTHLYESDSLEKEAVEKTEKQIEK 177

Query: 182 FRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHPM 232
           F  L+ + K       +  + SS G+L  P   +   R GI+L+G      DK     P+
Sbjct: 178 FDRLVDNLKQRGIVIPKLHIQSSYGLLNYPQLQYDYVRIGIALFGVLSSKQDKTKVKLPL 237

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  ++ +A +  +R+  +GE   Y G      D  IA  +IGYADG P  LSG       
Sbjct: 238 QPALSLKALVTSVREIKSGETAGYSGAYHAEADRKIAAVSIGYADGIPRNLSGT------ 291

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                 K  + G    I+GKI MD  + D+T    +  GD + + G     ++ + D+A 
Sbjct: 292 ----NNKVIVHGQKTSIIGKICMDQLLIDVTMIKDVRAGDTVTLIGREGEEEVSVLDMAD 347

Query: 349 ASGTTNYDLLVRIGTRY 365
            +GT   ++  R+G R 
Sbjct: 348 KAGTIANEIFSRLGKRL 364


>gi|315082997|gb|EFT54973.1| alanine racemase [Propionibacterium acnes HL027PA2]
          Length = 375

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V +V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I       P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGIPLPILKPPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|227878363|ref|ZP_03996318.1| alanine racemase [Lactobacillus crispatus JV-V01]
 gi|227862042|gb|EEJ69606.1| alanine racemase [Lactobacillus crispatus JV-V01]
          Length = 376

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 142/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N    M  L+   +  AVVK NAYG G  ++A      G     V
Sbjct: 6   HRPAVVKVNLGAIRRNIKNEMKHLATGQKMLAVVKANAYGHGAVEVAKIAIEEGAAGLCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++E ++LR       I VL  + P    I    N+   I ++  L    K +    + 
Sbjct: 66  AILDEALQLRHADIVKPILVLGVVSPEYAPIAAANNVSLTIPNLEWLKEAEKYLEKEQLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               + VD+G  R+G +  E     +             + +H A AD         Q+E
Sbjct: 126 LKVHIGVDSGMGRIGFNEDEDFIAANKFLQNNDNFYVEGMFAHFASADSADDTYFKHQVE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +   +      R GI +YG     N   P       
Sbjct: 186 KFAHMRSLLTVKPKWIHVDNTAASIFNKDVPSDCVRFGIGIYGLNPSSNPDSPDLKSSIS 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHEGDGVGYGSTFVADQDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +     PI+G+I MD  M  +   + +     + I   D      +   A
Sbjct: 301 -------KVKVGDEYCPIVGRICMDQFMVKMPKKMPLR--TKVVIISNDPTAPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|238854498|ref|ZP_04644836.1| alanine racemase [Lactobacillus jensenii 269-3]
 gi|260664819|ref|ZP_05865670.1| alanine racemase [Lactobacillus jensenii SJ-7A-US]
 gi|313472625|ref|ZP_07813114.1| alanine racemase [Lactobacillus jensenii 1153]
 gi|238832851|gb|EEQ25150.1| alanine racemase [Lactobacillus jensenii 269-3]
 gi|239529422|gb|EEQ68423.1| alanine racemase [Lactobacillus jensenii 1153]
 gi|260561302|gb|EEX27275.1| alanine racemase [Lactobacillus jensenii SJ-7A-US]
          Length = 375

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 90/383 (23%), Positives = 152/383 (39%), Gaps = 32/383 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +++DL A+K N     A L    +  AVVK NAYG G  K+A      G + F V
Sbjct: 6   HRPAEVEVDLLAIKKNLQEEKAHLKPGQKLFAVVKANAYGHGAVKVAKMAARNGAEGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS- 121
             ++E  +LR  +    I VL G+ P  E  I   + I + +   +    +         
Sbjct: 66  AVLDEAFELRDSSIVDPILVL-GVTPANEACIAAAHNISLTAPSLEWLEAADKALAKKDM 124

Query: 122 -HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQL 179
                L +D+G  R+G S  +     +         +   + +H A AD   SH    Q+
Sbjct: 125 VLKIHLAIDSGMGRIGFSEDQEFIAANEFLRNSTHFIVEGMFTHFASADSRDSHYFDYQV 184

Query: 180 ERFRT--LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----- 232
           +RF     I   K     +A+++  +   N H  + R GI LYG     N + P      
Sbjct: 185 KRFNHLKNILSIKPKWIHVANTASSIFDKNIHSDIVRFGIGLYGLNPSSNPASPDLESEI 244

Query: 233 --QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             +  ++  + +  ++K  +G  + YG       D  I    +GYADG    LSG     
Sbjct: 245 NLKPALSLVSELSFVKKVHSGYGIGYGSTYVADSDQWIGTVPVGYADGVIRKLSGF---- 300

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDV 346
                   K  +  +  PI+G+I MD  M  + + + +  G  + I+  + +    +   
Sbjct: 301 --------KIKVGAHYCPIVGRICMDQLMVLLPEKMPV--GTKVVIYSNNPEDPNFIKKA 350

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A    T +Y+L   +  R  + Y
Sbjct: 351 ADYVDTIHYELACLLSDRLPRIY 373


>gi|315037507|ref|YP_004031075.1| alanine racemase [Lactobacillus amylovorus GRL 1112]
 gi|325955971|ref|YP_004286581.1| alanine racemase [Lactobacillus acidophilus 30SC]
 gi|312275640|gb|ADQ58280.1| alanine racemase [Lactobacillus amylovorus GRL 1112]
 gi|325332536|gb|ADZ06444.1| alanine racemase [Lactobacillus acidophilus 30SC]
 gi|327182803|gb|AEA31250.1| alanine racemase [Lactobacillus amylovorus GRL 1118]
          Length = 376

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A++ N  + M  L    +  AVVK NAYG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIRRNLENEMKHLEPGQKMLAVVKANAYGHGAVEVAKVADEVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             ++E ++LR       I VL  + P    I     +   + ++  L    K +    + 
Sbjct: 66  AILDEALQLRHNDIVKPILVLGVVSPEYAPIAAVNGVSLTVPNLEWLKEAEKYLEKDNLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +  E     +             + +H A AD         Q++
Sbjct: 126 LKIHLGIDSGMGRIGFNEDEDFIAANKFLENNDNFFVEGMFAHFASADSSDESYFERQIK 185

Query: 181 RFRTL--ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +FR +  +   K     + +++  +        L R GI +YG         P       
Sbjct: 186 KFRHMESLLTVKPKWIHIDNTAASIFHSGIKSDLVRFGIGIYGLNPSSTPDTPDLKPAFK 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ VSYG       D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHKGDGVSYGSTFVADEDTIIGTVPVGYADGWIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +      I+G+I MD  M  + + + +  G  ++I   D      +   A
Sbjct: 301 -------KVKVGDKYCTIVGRICMDQFMVKMPEKMPV--GTKVEIISADPTAPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|328463455|gb|EGF35106.1| alanine racemase [Lactobacillus helveticus MTCC 5463]
          Length = 376

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 143/381 (37%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +K++L A++ N    M  L  N +  AVVK N YG G  ++A      G   F V 
Sbjct: 7   RPAVVKVNLGAIRRNIKNEMQHLEPNQKMLAVVKANGYGHGAVEVAKVAEEEGAAGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSH 122
            ++E ++LR       I VL  + P    I    N+   + ++  L    K      +  
Sbjct: 67  ILDEALELRRADIVKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKDAEKYLAKENLQL 126

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +D+G  R+G +   E +       N     +  + +H A AD         Q E+
Sbjct: 127 KIHLGIDSGMGRIGFNEDDEFVAANKFLENNDNFFIEGMFAHFASADSDDETYFKHQCEK 186

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------- 232
           F+ + S        +   +++  +        L R GI +YG     N S P        
Sbjct: 187 FKHMKSLLTVKPKWIHVDNTAASIFHSGIKSDLVRFGIGIYGLNPSSNPSSPDLTSAIEL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G       
Sbjct: 247 EPALSFESELTHVKTIHKGDGVGYGSTFMAEEDTIIGTVPVGYADGWIRKYQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 K  +     PI+G+I MD  M  +   + +  G  + I   +      +   A 
Sbjct: 301 ------KVKVGDEYCPIVGRICMDQFMVKMPKKMLV--GTKVVIISNNPSDPNNIKAAAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y++   +  R  + Y
Sbjct: 353 YVDTIHYEVACLLNDRLPRVY 373


>gi|90020561|ref|YP_526388.1| alanine racemase [Saccharophagus degradans 2-40]
 gi|89950161|gb|ABD80176.1| alanine racemase [Saccharophagus degradans 2-40]
          Length = 409

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 117/371 (31%), Positives = 190/371 (51%), Gaps = 22/371 (5%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +L I+L A+  NW  + +       A  V K +AYGLG +++APALY AG +DFFV ++ 
Sbjct: 46  KLTINLDAIAANWRLIQSRLAAGARAGAVVKADAYGLGVQEVAPALYRAGCRDFFVANLA 105

Query: 67  EGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + +R      A++ VL G  P +E       ++PVI+S      +  +          
Sbjct: 106 EALLVRSLLAGDAQVIVLSGCAPREESEFVRNGIVPVITSATMAERWLGVKGASK-CGAV 164

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L+V++G  RLGL   E      +  N       +++SHLACAD     +N+ QL+RF  +
Sbjct: 165 LKVNSGMGRLGLEPNEFESLLMHP-NFANAGFFMLMSHLACADQFDHPLNAAQLQRFERM 223

Query: 186 ----ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
               +       ASLA+SSGI + P++H+ + RPG++LYGG     + +PM+ VV     
Sbjct: 224 RQAFLKKVPAATASLANSSGIFISPSFHYDVARPGVALYGGNPLQRRQNPMRKVVDLRLP 283

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ +R   +GE V YG      R S++   A GYADG   +              GG  +
Sbjct: 284 VLQVRHLASGEAVGYGASFITQRPSVLLTLAGGYADGLFRSA-----------AAGGVVY 332

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSI---EVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           +    +PI+G+++MD  + D TD         G+ +++ G ++ +DD+A A+GT  Y++L
Sbjct: 333 LGEKPLPIVGRVSMDSIVVDATDVPQAAMPAEGNMLELLGDNVGVDDLAAAAGTIGYEIL 392

Query: 359 VRIGTRYAKFY 369
             +G RY + Y
Sbjct: 393 TSLGGRYRREY 403


>gi|294630935|ref|ZP_06709495.1| alanine racemase [Streptomyces sp. e14]
 gi|292834268|gb|EFF92617.1| alanine racemase [Streptomyces sp. e14]
          Length = 391

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 156/373 (41%), Gaps = 32/373 (8%)

Query: 17  KNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTP 76
           + N  ++   +  A   AVVK +AYG G  + A A   AG       + EE + LR    
Sbjct: 2   RANVRALRERTPGAALMAVVKSDAYGHGAVRCARAAVAAGATWLGTATPEEALALRAAGI 61

Query: 77  ---QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL-QVDTGF 132
              QAR+        G  +   + ++   +S +  L                  + DTG 
Sbjct: 62  APEQARVLCWLWTPGGPWREAVEADVDVSVSGLWALAEVRAAARAAGRPARVQLKADTGL 121

Query: 133 NRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTLISH- 188
            R G    +  +    +   +   L +++ + SH ACAD+P     + QL+RFR + +H 
Sbjct: 122 GRNGCQPADWPELVAEALRAEAEGLIRITGLWSHFACADEPGHPSIAAQLDRFREMTAHA 181

Query: 189 ----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEA 240
                +     +A+S   L  P  HF L R GI+LYG +            ++ V+T  A
Sbjct: 182 ETRGVRPEVRHIANSPAALTIPESHFDLVRTGIALYGISPAPELGVPADFGLRPVMTLSA 241

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + L++    G  +SYG       ++ + +  +GYADG P   SG            G  
Sbjct: 242 SLALVKHVPGGHGISYGHHYVTPGETTLGLVPVGYADGIPRHASGT-----------GPV 290

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYD 356
            + G    + G+I MD  + D+      EVG    +FGP    +   +D A A+GT  Y+
Sbjct: 291 LVGGKWRTVAGRIAMDQFVVDLGGDEP-EVGARAVLFGPGDGGEPTAEDWAQAAGTIAYE 349

Query: 357 LLVRIGTRYAKFY 369
           ++ RIGTR  + Y
Sbjct: 350 IVTRIGTRVPRVY 362


>gi|254525606|ref|ZP_05137658.1| alanine racemase [Prochlorococcus marinus str. MIT 9202]
 gi|221537030|gb|EEE39483.1| alanine racemase [Prochlorococcus marinus str. MIT 9202]
          Length = 399

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   AL+ N   +   LS N +  AVVK + YG   + ++      G     V 
Sbjct: 26  QRAWIEVKGKALEINVRQLRTKLSKNCQFMAVVKADGYGHDAKVVSDYAIKGGASQLGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EG+KLR +  +  I +L  ++      I F  +L+P ISS+ +    + +    G+ 
Sbjct: 86  TLKEGIKLRSFGVKKPILILGNLYTKKDLIISFKNDLMPTISSIRECLICNNIGKHFGLK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L+VDTG +RLG    + +       + +   +  I SHL+ AD+           +
Sbjct: 146 FSLHLKVDTGMSRLGFESNKFVQQFEKIKSFENISIDGIYSHLSSADEDNALDPKSTTQL 205

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q  +F        +     I+  LA+S+G+LL  ++HF + R G+S+YG +   KI+K+ 
Sbjct: 206 QRLKFNQLLKKINLDRNNEIKIHLANSAGMLLNKDFHFNMVRVGLSMYGYSPLAKIDKNL 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  + ++  IR    G  VSYGG+   +R + +AV +IGYADG P  LSG  +  
Sbjct: 266 LLKPALFLKVKVAFIRIIEPGVSVSYGGKFVSSRKTKLAVLSIGYADGVPRNLSGKIN-- 323

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                          + P +G ITMD  M DIT S  I +G  + + G D    I   + 
Sbjct: 324 ---------VIHNNKLYPQVGSITMDQMMVDITGSNEIRIGSTMVLLGSDGDKTISPLEW 374

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  S T  +++L     R  + 
Sbjct: 375 ATKSNTIPWEILCSFKNRLPRV 396


>gi|262375688|ref|ZP_06068920.1| alanine racemase [Acinetobacter lwoffii SH145]
 gi|262309291|gb|EEY90422.1| alanine racemase [Acinetobacter lwoffii SH145]
          Length = 370

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 151/376 (40%), Gaps = 27/376 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N   +     N++  AVVK NAYG G E++  AL   G   F    
Sbjct: 3   RPITAIIHQQALAHNLSVVRQCMPNSQVFAVVKANAYGHGIERVYAAL--HGADGFAFLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +EEG +LR    +  + +L G+             +   I S  Q+ +  +         
Sbjct: 61  IEEGTRLRALGCKKPLLLLEGVFALTDLFECAKHEMSFAIHSSHQVQWLKQFAEIVPDAQ 120

Query: 124 YALQ--VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQL 179
           + +   +++G NRLG   Q+  +           +    ++H + AD           Q 
Sbjct: 121 FDVFLKMNSGMNRLGFEPQQYAEIWQELHQLNNVRSITHMTHFSDADGERFGLDGIEHQH 180

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTV 235
             F   I  ++G  +   S++ +      H  + R GI LYG +        +   +Q  
Sbjct: 181 FIFNKTIQGFEGKTSLSNSAAILRHHQTLHSDIVRSGIMLYGSSPDYPTHTIQDWNLQPS 240

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  + II I+   AG+ + YG +   T+D  I + A GYADGY                
Sbjct: 241 MSLRSEIIAIQMIQAGQSIGYGSKFIATQDMRIGIVACGYADGYQR-----------LSA 289

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALAS 350
            G    +       LG+I+MDM   D+T     ++G  + ++G       + +D+VA +S
Sbjct: 290 TGTPVLVDSIKTQTLGRISMDMLAVDLTALPHADIGSEVVLWGQSSQGVILPIDEVAASS 349

Query: 351 GTTNYDLLVRIGTRYA 366
           GT  Y+L+  +  R  
Sbjct: 350 GTIGYELMCAVTARVH 365


>gi|299771998|ref|YP_003734024.1| alanine racemase [Acinetobacter sp. DR1]
 gi|298702086|gb|ADI92651.1| alanine racemase [Acinetobacter sp. DR1]
          Length = 367

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 88/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKTMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L GI  P          L   I S  Q+ +  K         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVEKH-PYPAQFN 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VCLKMNSGMNRLGFKPQNYVQAWERLNNLANVSKITHMMHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  +I    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIIKDLPGERSVSNSAAILRYQDQLKSDYARSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQPITIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTIGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTVRV 361


>gi|114777489|ref|ZP_01452486.1| biosynthetic alanine racemase [Mariprofundus ferrooxydans PV-1]
 gi|114552271|gb|EAU54773.1| biosynthetic alanine racemase [Mariprofundus ferrooxydans PV-1]
          Length = 358

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 116/376 (30%), Positives = 173/376 (46%), Gaps = 28/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M         I+L  L +N+  +   + +A   AVVK NAYG G   +APAL+ AG + F
Sbjct: 1   MSRPAIAW--INLDHLCHNYRLLQQAATDASVMAVVKANAYGHGLNLVAPALFRAGCRLF 58

Query: 61  FVTSVEEGVKLRL-------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS 113
            VT  +EG KLR                +      G   +    +L P IS   Q     
Sbjct: 59  AVTDADEGAKLRNILRSDDPAGDTEIALLSGIFDAGDASLATTEHLTPTISDSAQCDMLQ 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                G +    ++VDTG NRLG +  + L            Q+   +SHLACAD P   
Sbjct: 119 AADFDGAA---WIKVDTGMNRLGAAEPQVLIRQCLQA---GIQIRGFMSHLACADTPLHP 172

Query: 174 VNSVQLERFRTLISHYKG-IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           +N  Q ERF +L       +  SL +S+GI+  P+    + RPGI+LYG      K   +
Sbjct: 173 MNRQQAERFASLCDQAAPQLPRSLLNSAGIISMPDQCLDVVRPGIALYGAEPVAEKPMGL 232

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+   AR+I +R   AGE VSY           IA+ + GYADG P  LSG       
Sbjct: 233 KPVMRMTARVIQVRDIKAGETVSYSASFTAETSMRIAIVSAGYADGIPRALSGC------ 286

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                G+      ++P+ G++ MD TM +++D+ +I+ GD ++ +G ++  +DVA    T
Sbjct: 287 -----GQASCHDRLLPVTGRVCMDYTMLNVSDT-NIQSGDNVEFWGMELAANDVASMIDT 340

Query: 353 TNYDLLVRIGTRYAKF 368
            +Y L   +G R  + 
Sbjct: 341 ISYTLFTGVGERVRRV 356


>gi|257893317|ref|ZP_05672970.1| alanine racemase [Enterococcus faecium 1,231,408]
 gi|257829696|gb|EEV56303.1| alanine racemase [Enterococcus faecium 1,231,408]
          Length = 373

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 150/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++  G   
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTREWLQVAAAILEEGKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD P      +Q
Sbjct: 126 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQPDDTYWKLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFMEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 246 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|291459573|ref|ZP_06598963.1| alanine racemase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417851|gb|EFE91570.1| alanine racemase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 429

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 161/375 (42%), Gaps = 30/375 (8%)

Query: 11  IDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +DL  ++ N  +   L     R  +V+K +AYG G   +A A+ +     + V + EEG 
Sbjct: 45  VDLDIIRENVRNARKLLPKGCRFCSVLKADAYGHGAPAVASAIDDLS-DFYAVATPEEGA 103

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQV 128
            LR +  Q  I VL  +      ++ +  + P +  + Q    SK     G +    L V
Sbjct: 104 LLRAHGFQKPILVLGAVSDRAYPMLLERRIRPAVFLLSQAKALSKAAGEAGCTALLHLAV 163

Query: 129 DTGFNRLGLSLQEA--LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           DTG  R+G++ +E    +   +       ++  I +H + AD+     + +Q ERFR   
Sbjct: 164 DTGMGRIGIASEEEGSAELALSIAALPNLKVEGIFTHFSTADETDKEFSFLQRERFRRFC 223

Query: 187 SHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTA 238
                          A+S+GI+      F + R GI+LYG            P++  ++ 
Sbjct: 224 EKLSERGLSIPIRHCANSAGIIASIGTDFDMVRDGIALYGIYPSRAAESARLPLKAALSW 283

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A++  +R+  A   +SYG      R++ +AV  +GY DG P  LS              
Sbjct: 284 FAKVSAVRRLPASSPISYGRTFTTARETELAVIPLGYGDGLPRLLSNR-----------A 332

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTN 354
           +  I+G   PILG+I MD  M D+T    +  GD + + G     +I L D     G   
Sbjct: 333 EVLIRGRRCPILGRICMDQFMADVTGL-GVRRGDRVTLLGRDGEEEIGLYDW-ERLGAFP 390

Query: 355 YDLLVRIGTRYAKFY 369
           Y++L  +G R  + Y
Sbjct: 391 YEVLCGLGKRVPRLY 405


>gi|256371254|ref|YP_003109078.1| alanine racemase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007838|gb|ACU53405.1| alanine racemase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 363

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 161/369 (43%), Gaps = 13/369 (3%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  +     +IDL  L+ N   +   +  A  +AVVK +AYG G   +A AL +  V  F
Sbjct: 1   MIGHRPTEARIDLERLRANARLLAERAAPAALSAVVKADAYGHGASTVARALGDL-VDAF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT-FYSKLMSCG 119
            V +VEEG+ LR      R+ VL             ++L P +     +        + G
Sbjct: 60  CVATVEEGLALRAAGVTGRVLVLSEPPESAVSACAASSLEPFVEHERFVEALAGAASALG 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 + VDTG +R G+   +A     ++    +  + +    +   + P+      QL
Sbjct: 120 REASVHIDVDTGMHRSGVHPAQAATLAASARRHGVRVVGVASHLVRADEAPTHPTTLEQL 179

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            RFR + +     E  L ++ G+L  P   F+  R GI LYG   + +    ++ V+   
Sbjct: 180 SRFREVAARIGAPERHLLATGGLLALPEGRFERVRVGIGLYGYGPRRDDVAGLRPVLRLV 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + ++ +    AGE VSYG ++ L   + +A   IGYADG P            +   G  
Sbjct: 240 SHVVRLEALGAGEAVSYGHRRPLDVPAEVATLPIGYADGVPR----------AAFDAGLA 289

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
            + KG  +PI G +TMD TM      L + +GD + + G ++   + A   GT  Y++L 
Sbjct: 290 FWAKGVRLPIAGTVTMDQTMVAAPRGL-LALGDEVSLIGDEVDAWEWADVLGTIPYEVLA 348

Query: 360 RIGTRYAKF 368
           R+G R  + 
Sbjct: 349 RLGPRIPRV 357


>gi|331699117|ref|YP_004335356.1| Alanine racemase [Pseudonocardia dioxanivorans CB1190]
 gi|326953806|gb|AEA27503.1| Alanine racemase [Pseudonocardia dioxanivorans CB1190]
          Length = 419

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 30/386 (7%)

Query: 3   SNEFLRLK--IDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           S+   R +  +DL A+++N   ++    +  A T AVVK + YG G   +A A   AG  
Sbjct: 25  SDRGPRAELVVDLAAVRHNVGLLSRGAAASGAATMAVVKSDGYGHGAADVARAALQAGAS 84

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
              V +++E + LR    +A +     +            +   +SS        +   +
Sbjct: 85  WLGVCTLDEALALRADGIEAPVLSWLHLPHEDFAPAVAAGVDLSVSSHGHLDAVLAGARA 144

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHV 174
                   L++DTG +R G    +  D    +         ++  + SHLA AD     V
Sbjct: 145 VDRPARLHLKIDTGLSRNGCPEDDWPDLVDAAAKAAAAGRCEVVAVWSHLAVADVARHPV 204

Query: 175 NSVQLERFR--TLISHYKGIEA--SLASSSGILLGPNYHFQLTRPGISLYGGTD--KINK 228
              Q  RF     ++  +G+     LA+S+  +  P+ H+ L RPGI++YG     +   
Sbjct: 205 TEAQAARFDAAWRVARDRGLTPIRHLANSAATMTRPDLHYDLVRPGIAVYGLDPLGRPVA 264

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             P++  +T   R++L+++  AGE VSYG +    RD+++A+  IGY DG P  ++    
Sbjct: 265 ESPLRPAMTVRGRVVLVKQVRAGEGVSYGHEFTTPRDTVLALVPIGYGDGVPRRMNFGGR 324

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPD----IK 342
                       ++ G   P++G++ MD  + D        +  GD   +FGP       
Sbjct: 325 MR---------VWLAGRSRPVVGRVCMDQVVVDCGPDGGAEVREGDVAVLFGPGDDGAPT 375

Query: 343 LDDVALASGTTNYDLLVRI-GTRYAK 367
             + A   GT +Y+++  + G R  +
Sbjct: 376 AQEWADELGTIHYEVVTGVQGRRMTR 401


>gi|325335910|gb|ADZ12184.1| Alanine racemase [Riemerella anatipestifer RA-GD]
          Length = 741

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/352 (26%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           L    +  A+VK  +YGLG  +IA  L +  +    V   +EGV+LR       I V+  
Sbjct: 399 LKPETKIMAMVKAYSYGLGGYEIAEFLQHHHIDYLGVAVADEGVELRKNGITVPIVVMNP 458

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG---VSHPYALQVDTGFNRLGLSLQEA 142
                   I + NL P I S   L  + K +        +P  ++++TG +RLG    E 
Sbjct: 459 EQHS-YNTIIEYNLEPNIYSFRVLELFHKQLKQNGYEGRYPIHIKLETGMHRLGFKEDEI 517

Query: 143 LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH-----YKGIEASLA 197
                      +   S+     +            Q ++F  L  +            + 
Sbjct: 518 DQLKDYLNQMSVKVESIFSHLSSSDIPQEKDYTLAQCQKFDKLSQNIIKDLNYKPLRHIL 577

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +S+GI     Y   + R GI + G +        +  VV  ++ I  I +    + VSYG
Sbjct: 578 NSAGITNYTYYQMDMVRIGIGMMGISASPEIQPLLNPVVAFKSVISQISEIQPNDSVSYG 637

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            + K ++ + IA   +GYADG P  LS             G   IK  + PI+G + MDM
Sbjct: 638 RRYKASKSTRIATIPVGYADGVPRLLSNGV----------GYVGIKNTLCPIVGSVCMDM 687

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            M DI+D  + + GD + IF     L+D A+ S T  Y++L  I  R  + Y
Sbjct: 688 MMVDISDLPT-KEGDEVTIFHEKPSLEDFAMYSQTIPYEVLTSISRRVKRVY 738


>gi|313206649|ref|YP_004045826.1| alanine racemase [Riemerella anatipestifer DSM 15868]
 gi|312445965|gb|ADQ82320.1| alanine racemase [Riemerella anatipestifer DSM 15868]
 gi|315022146|gb|EFT35175.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Riemerella anatipestifer RA-YM]
          Length = 814

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 92/352 (26%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           L    +  A+VK  +YGLG  +IA  L +  +    V   +EGV+LR       I V+  
Sbjct: 472 LKPETKIMAMVKAYSYGLGGYEIAEFLQHHHIDYLGVAVADEGVELRKNGITVPIVVMNP 531

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG---VSHPYALQVDTGFNRLGLSLQEA 142
                   I + NL P I S   L  + K +        +P  ++++TG +RLG    E 
Sbjct: 532 EQHS-YNTIIEYNLEPNIYSFRVLELFHKQLKQNGYEGRYPIHIKLETGMHRLGFKEDEI 590

Query: 143 LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH-----YKGIEASLA 197
                      +   S+     +            Q ++F  L  +            + 
Sbjct: 591 DQLKDYLNQMSVKVESIFSHLSSSDIPQEKDYTLAQCQKFDKLSQNIIKDLNYKPLRHIL 650

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +S+GI     Y   + R GI + G +        +  VV  ++ I  I +    + VSYG
Sbjct: 651 NSAGITNYTYYQMDMVRIGIGMMGISASPEIQPLLNPVVAFKSVISQISEIQPNDSVSYG 710

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            + K ++ + IA   +GYADG P  LS             G   IK  + PI+G + MDM
Sbjct: 711 RRYKASKSTRIATIPVGYADGVPRLLSNGV----------GYVGIKNTLCPIVGSVCMDM 760

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            M DI+D  + + GD + IF     L+D A+ S T  Y++L  I  R  + Y
Sbjct: 761 MMVDISDLPT-KEGDEVTIFHEKPSLEDFAMYSQTIPYEVLTSISRRVKRVY 811


>gi|224542708|ref|ZP_03683247.1| hypothetical protein CATMIT_01893 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524418|gb|EEF93523.1| hypothetical protein CATMIT_01893 [Catenibacterium mitsuokai DSM
           15897]
          Length = 328

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 152/340 (44%), Gaps = 16/340 (4%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
             A++K NAYG G +++A  L +  + Q F V +++E V LR    +  I VL  +    
Sbjct: 1   MVAIIKANAYGHGYKEVASVLKDEPIIQMFAVATLKEAVDLRNLGVKQDILVLGAVPLED 60

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
             I  + N+   + S   L   +++          L +D+G NR+G   ++  +      
Sbjct: 61  LNIAIEKNISLALFSFDYLNKINEMHHYDAPVKVHLSIDSGMNRIGFKTEKEFEQAMEMI 120

Query: 151 NKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYH 209
           +     +  I +H A ADD         QL  F++++ + +       +S+ ++   +  
Sbjct: 121 DPAKIDVEGIFTHFATADDFSQDDEYEKQLALFKSIVGNNRFKYVHCDNSAAMMFHHSDF 180

Query: 210 FQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
             LTR GI++YG   +  ++  ++  ++   ++ +++    GE + YG       D  +A
Sbjct: 181 GNLTRIGIAMYGVDPRGEENKDLKQAMSLYTKVAMVKVVPKGEKIGYGMTYTADEDQYVA 240

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE 329
              IGYADG+     G             + +I G+  P++G++ MD  M  +    +++
Sbjct: 241 TLPIGYADGFTRANQGR------------EVYINGHYYPVVGRVCMDQCMVKV--DENVK 286

Query: 330 VGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            GD ++IFG  I L  +A    T  Y+++  I  R  + Y
Sbjct: 287 PGDDVEIFGEHISLAKMAKEINTIPYEIICLISPRVERIY 326


>gi|329902874|ref|ZP_08273284.1| Alanine racemase, catabolic [Oxalobacteraceae bacterium IMCC9480]
 gi|327548584|gb|EGF33244.1| Alanine racemase, catabolic [Oxalobacteraceae bacterium IMCC9480]
          Length = 361

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 93/371 (25%), Positives = 155/371 (41%), Gaps = 22/371 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   ID++AL++N          A T AVVK NAYG G E+   A          +  
Sbjct: 3   RPLVAIIDISALQHNLAEARRRMPAAITWAVVKANAYGHGLERGMRAF--GAADGLALVE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            E  V LR    +  I +L G     +  +   + + +    PQ   + +          
Sbjct: 61  PEAAVALRELGWRKPILLLEGCFDLIDFRLAAQHHLELTIHCPQQIGWLEQTRFDAPVNV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLERF 182
            L++++G NRLG   Q+                  +++H A AD  D      + Q+ RF
Sbjct: 121 HLKMNSGMNRLGFMPQDFAAAYQRLRVNPQVGKIALMTHFANADAADTPGMTLAEQVRRF 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM-----QTVVT 237
           +   +       ++++S+  LL  +      RPGI LYGGT   + S P      ++ +T
Sbjct: 181 QLGSAGLDA-PWNISNSAATLLHADMRSHEVRPGIMLYGGTPGTHTSTPAGAFGLRSAMT 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ +I +++   G+ V YG +        I V A GYADGYP                G
Sbjct: 240 LQSELIAVQQIHPGDAVGYGSRFIAETPMTIGVVACGYADGYPRHA-----------PSG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               + G    ++G ++MDM   D+T   +   G  + ++G  + +D+VA A+GT  Y+L
Sbjct: 289 TPVLVDGVRTRLVGNVSMDMLTVDLTPIPTAHHGSCVTLWGDGLPIDEVAQAAGTIGYEL 348

Query: 358 LVRIGTRYAKF 368
           +  I  R  + 
Sbjct: 349 MCAIAPRV-RV 358


>gi|257896498|ref|ZP_05676151.1| alanine racemase [Enterococcus faecium Com12]
 gi|257833063|gb|EEV59484.1| alanine racemase [Enterococcus faecium Com12]
          Length = 373

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++  G   
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTREWLQVAAAILEEGKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD P     ++Q
Sbjct: 126 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQPDDTYWNLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFMEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 246 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|126727196|ref|ZP_01743033.1| alanine racemase [Rhodobacterales bacterium HTCC2150]
 gi|126703624|gb|EBA02720.1| alanine racemase [Rhodobacterales bacterium HTCC2150]
          Length = 348

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           LKIDL A+  NW +++A+ +G+  TAAVVK +AYGLG   +A  L  AG   FFV + EE
Sbjct: 6   LKIDLNAIARNWRALDAMSAGDVETAAVVKADAYGLGIGPVAKILAKAGAHTFFVATAEE 65

Query: 68  GVKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G   R      A I V  G   G    I D +L+P+++S+ Q    ++ +    S  + +
Sbjct: 66  GAAARVALGNDAIINVFSGHMAGDTTTIRDFHLMPMVNSIEQ---LTRHLENLPSFQFGI 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+D+G NRLG+   E       + +      +LI+SHLACADDP+   N+ QL +FR + 
Sbjct: 123 QLDSGMNRLGMEPHEWSAVASLALSS---DPTLIMSHLACADDPAHPQNADQLSQFRAIT 179

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +    +  SLA++ G LLGP +HF +TRPG+ LYGG    +     Q VV     +I  R
Sbjct: 180 AG-LDVPLSLAATGGTLLGPAFHFSMTRPGVGLYGGFPYSDA----QAVVRLSLPVIQTR 234

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +   GE V Y    +  R S IA  + GYADG    LS     ++               
Sbjct: 235 EVAVGETVGYSASWRAERPSKIATLSAGYADGITRALSNAAILYA-----------GDTP 283

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            P+ G+++MD+   D++     ++  ++ +  P   +D VA   GT  Y++L  +G RY 
Sbjct: 284 CPLAGRVSMDLLTVDVSHLD--QMPSHLDLLCPAQTVDQVAELGGTIGYEILTSLGHRYE 341

Query: 367 KFY 369
           + Y
Sbjct: 342 RQY 344


>gi|264676328|ref|YP_003276234.1| alanine racemase [Comamonas testosteroni CNB-2]
 gi|299533815|ref|ZP_07047186.1| alanine racemase [Comamonas testosteroni S44]
 gi|262206840|gb|ACY30938.1| alanine racemase [Comamonas testosteroni CNB-2]
 gi|298718231|gb|EFI59217.1| alanine racemase [Comamonas testosteroni S44]
          Length = 368

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 147/374 (39%), Gaps = 26/374 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +     +A+  +V+K NAYG G E +   L       F +  
Sbjct: 3   RPITATIHPEAVRHNLERVRQAVPDAKLWSVIKANAYGHGIENVFEGLRA--TDGFAMLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E  ++R    +  I +L G+   ++  I     I       +   +       V H  
Sbjct: 61  LDEAQRVRNLGWRGPILLLEGVFELRDLEICSRLGIWHAVHCDEQIDWLAAHKTQVGHRV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + +                    ++H + AD    H    QL  F  
Sbjct: 121 FLKMNSGMNRLGFTPERFRAAYARLNALPQVDEISFMTHFSDAD--VEHGLDHQLRVFHE 178

Query: 185 LISHYKGIEASLASSSGILLG--PNYHFQLTRPGISLYGGTDKINKSHPMQT----VVTA 238
                 G  +   S++ +L G   N      RPGI LYG +                +T 
Sbjct: 179 TTLDLPGERSVSNSAATLLHGDENNVRCDWVRPGIVLYGSSPDFPTHDAAHWGLEPTMTL 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            ++II  ++  AG+ V YG + +      + V A GYADGYP                G 
Sbjct: 239 SSKIIGTQELHAGDTVGYGSRFQCDGPLRLGVVACGYADGYPRVC-----------PTGT 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTT 353
              + G     LG+++MDM   D++      +G  + ++G       + +D+VA A+GT 
Sbjct: 288 PVLVDGVRTRTLGRVSMDMMAVDLSPVPKARLGSEVTLWGRASNGAVLPIDEVAAAAGTL 347

Query: 354 NYDLLVRIGTRYAK 367
            Y+L+  +  R  K
Sbjct: 348 GYELMCAVAPRVPK 361


>gi|257887884|ref|ZP_05667537.1| alanine racemase [Enterococcus faecium 1,141,733]
 gi|257823938|gb|EEV50870.1| alanine racemase [Enterococcus faecium 1,141,733]
          Length = 373

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 6   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++  G   
Sbjct: 66  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTRGWLQVAAAILEEGKLE 125

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD P     ++Q
Sbjct: 126 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQPDDTYWNLQ 185

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 186 KERFMEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 246 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 301 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 352 LGTIHYEVACGLGQRIPREY 371


>gi|300362411|ref|ZP_07058587.1| alanine racemase [Lactobacillus gasseri JV-V03]
 gi|300353402|gb|EFJ69274.1| alanine racemase [Lactobacillus gasseri JV-V03]
          Length = 376

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 145/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N  + M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNIENEMQHLEPGQKMLAVVKANGYGHGAVEVAKLADQVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    ++   + ++  L    K   +  + 
Sbjct: 66  AILDEALELRRADITKTILVLGVVSPEYAPIAAANDISLTVPNLEWLKEAEKYLENSDLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEDKDFIAANKFLKNNDNFYIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +        L R GI +YG     N + P       
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHDGIKSDLVRFGIGIYGLNPSSNPNSPDLKSKIA 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               ++ E+ +  ++    G+ V YG      +D++I    +GYADG+     G      
Sbjct: 246 LDPALSFESELTHVKTIHQGDGVGYGSTFVANKDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVA 347
                  K  +     PI+G+I MD  M ++   +   +G  + I   +      +   A
Sbjct: 301 -------KVKVGNAYCPIVGRICMDQFMVEMPKEMP--IGTKVVIISNNPDDPNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|119476766|ref|ZP_01617076.1| alanine racemase 1, PLP-binding, biosynthetic [marine gamma
           proteobacterium HTCC2143]
 gi|119450022|gb|EAW31258.1| alanine racemase 1, PLP-binding, biosynthetic [marine gamma
           proteobacterium HTCC2143]
          Length = 338

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 26/348 (7%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHP-GQE 91
            A+VK +AYG G  ++A  L         V  VEE ++LR      RI VL G       
Sbjct: 1   MAMVKADAYGHGLIEVAATLDA--ADGLAVARVEEALELRAAGFMQRILVLAGALTLTDL 58

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
                 ++  VI S  Q+  +    +        L++D+G +RLGLS  +   +      
Sbjct: 59  LQCSRQSIDLVIHSANQVDEF-LAATLSAPVNIWLKIDSGMHRLGLSADQFQQYQQQLSR 117

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQ 211
               +  L ++H   +D  ++     Q   F   ++ +  +  SLA+S+ I+  P+ H  
Sbjct: 118 SSNSREILSMTHFGSSDADNTQQTQQQEALFEEAVAGFS-VPQSLANSAAIIKRPSSHRD 176

Query: 212 LTRPGISLYGGTDKINKSHPMQTV-----VTAEARIILIRKALAGELVSYGGQKKLTRDS 266
             RPGI LYG      +S  +  V     +T  + +I  R   AG+ V Y  +     DS
Sbjct: 177 WVRPGIMLYGANPLTAESQHLFPVNLQTVMTLSSEVIATRGVKAGDSVGYNSRWTAPSDS 236

Query: 267 LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL 326
           +IA   +GY DGYP                G    + G    ++G ++MD+   D+T   
Sbjct: 237 IIATVGVGYGDGYPRHARN-----------GTPVLVNGQRAALVGAVSMDLITIDVTHCN 285

Query: 327 SIEVGDYIQIFGP-----DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           ++ VGD + ++G       +  ++VA  + T +Y+L   +  R  K Y
Sbjct: 286 TVSVGDEVTLWGNASTGHQLAAEEVAQWAETISYELFTSVTPRVIKTY 333


>gi|322378393|ref|ZP_08052847.1| alanine racemase, biosynthetic (alr) [Helicobacter suis HS1]
 gi|322380074|ref|ZP_08054330.1| biosynthetic alanine racemase [Helicobacter suis HS5]
 gi|321147481|gb|EFX42125.1| biosynthetic alanine racemase [Helicobacter suis HS5]
 gi|321149149|gb|EFX43595.1| alanine racemase, biosynthetic (alr) [Helicobacter suis HS1]
          Length = 389

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 167/391 (42%), Gaps = 34/391 (8%)

Query: 1   MHSNEFLR----LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M +N  L     ++ID  AL +N+  ++ ++      AVVK NAYG+G  + +      G
Sbjct: 10  MSTNPLLSRASYIEIDTKALAHNFKVISEVADGMAIMAVVKANAYGVGALEASRVFIEQG 69

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                V + EE +++RL+     I +L        + +   ++   + S  Q  ++S++ 
Sbjct: 70  ATYLGVATYEEALEVRLHFASIPILILGFTPTNMAEDLIKNHITQTLFSYEQACYFSQVA 129

Query: 117 -SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
            S        +++DTG +RLG    Q++ +        K  ++  I +H + AD      
Sbjct: 130 LSLKQKLKVHIKIDTGMSRLGFFPTQQSANTIAKIAQLKGLEVEGIFTHHSNADSLYKGY 189

Query: 175 NSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--- 226
            ++Q ERF   +     +        +A+S+  +  PNY   + R G++LYG    I   
Sbjct: 190 ATMQAERFIEFLDLLDQLGLSFKYRHMANSAATISMPNYGLDMARVGLALYGLHPSIYTQ 249

Query: 227 ----NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT 282
                K   ++ V+T +A+I+ +++  AG L+ YG        + + V  +GY DG+   
Sbjct: 250 DALLKKGFELKNVLTLKAQIVSLKEIPAGRLIGYGEDFYCLEPTRVGVLPLGYGDGFSKV 309

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-- 340
           L                G + G  +PI+G + MD    D+      + GD + + G    
Sbjct: 310 LGN-----------KAWGLLHGKKIPIIGGVCMDQCFVDLGAI-QAKEGDTVILLGDSKS 357

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             +   D+A   G  NY+ +  +  R  + Y
Sbjct: 358 GAMGAGDIAKILGIINYEAITMLTKRLPRVY 388


>gi|116618901|ref|YP_819272.1| alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097748|gb|ABJ62899.1| alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 373

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 98/378 (25%), Positives = 166/378 (43%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L IDL A++ N   +   +G  R  AVVK NAYG G +++  AL+  GV DF V +
Sbjct: 10  RPTWLDIDLKAIQTNAKLIMRHAGAQRLIAVVKANAYGHGAKQVVGALFEVGVYDFAVAT 69

Query: 65  VEEGVKLRLYTPQARIFVL--YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + EGV LR Y PQA I +         Q +++ +  L P + +   L      +  G   
Sbjct: 70  IGEGVDLRKYYPQAEINIFLLGVQDVTQTEVMVENRLSPAVGTTEWLDEAVNYIKDGQKL 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFN-KKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R+G     A++  ++     +  QL+ + +H A ADD + +    Q++R
Sbjct: 130 DVQLAVDTGMGRMGAHSASAVEDMYHLIQGTEKFQLAGVFTHFATADDNNQNYYDEQVQR 189

Query: 182 FRTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGT---DKINKSHPMQTV 235
           F   +      +       S S I      +    R G  LYG      +     P++  
Sbjct: 190 FYQWVQSAGIPKQYWHLANSGSAIWHHDEIYTDTIRVGSVLYGYNPGAPEKKMPLPLKPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  ++++  + +   GE VSYG      +   IA   IGYADGY   +SG+         
Sbjct: 250 LQLKSKLGSVHQLTTGESVSYGATYTAEKPQWIATLPIGYADGYLRRMSGM--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              K  + G++  ++G++TMD  +  +     +  G  + + G      I ++++A  + 
Sbjct: 301 ---KVLVDGHIEHVIGRVTMDQIVITLKQKYPV--GKTVTLVGLEGENQISVEEIAEYAQ 355

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L   G R  + Y
Sbjct: 356 TIPHEILTNFGARLPRIY 373


>gi|227550864|ref|ZP_03980913.1| alanine racemase [Enterococcus faecium TX1330]
 gi|293379277|ref|ZP_06625423.1| alanine racemase [Enterococcus faecium PC4.1]
 gi|227179962|gb|EEI60934.1| alanine racemase [Enterococcus faecium TX1330]
 gi|292642073|gb|EFF60237.1| alanine racemase [Enterococcus faecium PC4.1]
          Length = 374

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/380 (21%), Positives = 151/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 7   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++  G   
Sbjct: 67  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTREWLQVAAAILEEGKLE 126

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD P     ++Q
Sbjct: 127 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQPDDTYWNLQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 187 KERFMEVLKKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 247 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 302 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 352

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 353 LGTIHYEVACGLGQRIPREY 372


>gi|213583064|ref|ZP_03364890.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
          Length = 362

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 107/360 (29%), Positives = 171/360 (47%), Gaps = 15/360 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLAHHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P          + P+++SV Q +T+ +   +     P  +Q+
Sbjct: 76  LRNILSADAMVVLLNGVMPQAMPFCCAQQITPLLNSVDQVMTWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKKA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 196 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLTILRVQDV 254

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G  + YG     TR   IA  + GYADG P  L                   +G  +P
Sbjct: 255 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPPAGVCWRGVRLP 303

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 304 VLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAACDTIPYEIMARLGARFRRI 362


>gi|269796206|ref|YP_003315661.1| alanine racemase [Sanguibacter keddieii DSM 10542]
 gi|269098391|gb|ACZ22827.1| alanine racemase [Sanguibacter keddieii DSM 10542]
          Length = 412

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 98/395 (24%), Positives = 164/395 (41%), Gaps = 31/395 (7%)

Query: 1   MHSNEFL-RLKIDLTALKNNWHSMNALSGN-----ARTAAVVKDNAYGLGCEKIAPALYN 54
           M S  F  R  +DL A+++N   +   +       A+  AVVK + YG G    A A   
Sbjct: 1   MTSRYFPARAVVDLGAIRSNVTELARRAAPSADRQAQVLAVVKADGYGHGLVPAARAAVA 60

Query: 55  AGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYS 113
            G         +E + LR      R+             +   ++   ++ V       +
Sbjct: 61  GGATWLGAAQAQEALDLRAAGVTTRLLTWLAAPGAPYAELLRADVDVSVADVWALDAVVA 120

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQE---ALDFTHNSFNKKLGQLSLIISHLACADDP 170
                G +    ++VDTG  R G+   E    L     + ++ + ++  I SHLA AD+P
Sbjct: 121 AARETGRTARVHVKVDTGLGRNGVMPDELGDVLARAVQAQSEGVLEVVGIWSHLALADEP 180

Query: 171 SSHVNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
                  Q E F   +     +        LA+S+  L  P  H+ L RPG+++YG +  
Sbjct: 181 EHPSVLAQAEAFDDAVRLAERAGAHLEVRHLANSAATLTAPRLHYDLVRPGLAVYGLSPV 240

Query: 226 INK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
            +      + +   +T EAR+  +++  AG  VSYG +   T D+++ V  +GYADG P 
Sbjct: 241 PDLGGPGDYGLVPAMTLEARLATVKRVPAGHGVSYGHRYTTTEDTVLGVVPVGYADGVPR 300

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVP---ILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
             SG        V +G      G       + G++ MD  + D+  + +   GD + +FG
Sbjct: 301 HASGGPGTTGGPVRVGS-----GATARTLGVAGRVCMDQVVVDLGPAATEAAGDTVVLFG 355

Query: 339 P----DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                     D A A+GT +Y++  R+G R  + Y
Sbjct: 356 SGADGGPTAQDWADAAGTISYEITTRLGARVPRVY 390


>gi|312140864|ref|YP_004008200.1| alanine racemase [Rhodococcus equi 103S]
 gi|311890203|emb|CBH49521.1| putative secreted alanine racemase [Rhodococcus equi 103S]
          Length = 414

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 102/380 (26%), Positives = 166/380 (43%), Gaps = 28/380 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               IDL A+  N   +   +G A   AVVK +AY  G   +A A   AG  +  VT++ 
Sbjct: 38  AEAVIDLDAVAYNIGILREHAGGATVMAVVKADAYNHGAVPVARAALAAGAGELGVTTLA 97

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           EG++L+     A +                  +   +SS        +     G +    
Sbjct: 98  EGLELKNAGITAPVLSWLHTADSDFAPAVAAGVELGLSSPRHLAAVAAAARQVGTAATVT 157

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSF---NKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           ++VDTG NR G+S +E  DF  +      +   +   + SHLA AD+P   V   Q ERF
Sbjct: 158 VKVDTGLNRNGVSREEWTDFLKDLARVEAEGAVRFKGVFSHLAHADEPHHPVIDDQRERF 217

Query: 183 RTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
            + +   + I      A L++S+  L  P+  F + RPGI++YG +   +  +  ++ V+
Sbjct: 218 TSALEDAERIGLVPEAAHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPDLGTFGLRPVM 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  +R+ L++K  AGE VSYG       D+ +A+  +GYADG P  L G           
Sbjct: 278 TFRSRVALVKKVAAGEGVSYGHTWVAPHDTTVALLPVGYADGIPRALGGRF--------- 328

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPD------IKLDDVALA 349
             + ++     P +G++ MD  + D+  D   +  GD    FG            D A A
Sbjct: 329 --EVWLGDDRRPGIGRVCMDQVVVDLGPDGAGVREGDTAVFFGDGDGDRGVPHAQDWADA 386

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T +Y+++  +  R  + Y
Sbjct: 387 LDTIHYEVVTSVRGRTIRTY 406


>gi|319941566|ref|ZP_08015892.1| alanine racemase [Sutterella wadsworthensis 3_1_45B]
 gi|319804936|gb|EFW01778.1| alanine racemase [Sutterella wadsworthensis 3_1_45B]
          Length = 370

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  +IDL AL++N   M + +      AVVK NAYG G +    A  +          
Sbjct: 16  RPISAEIDLEALRHNLGVMRSKAAGRALWAVVKANAYGHGLDNAVTAFAD--ADGLATID 73

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + +   +R      RI +L G       + +    +  V+ S  Q+       +      
Sbjct: 74  LCDAEIVRRCGWHKRILLLEGFFDAADIEPLQTLKVETVVHSPWQIAILR--AAKPKDVR 131

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG    EA             ++   ++H A A + S+    V ++   
Sbjct: 132 VHVKVNSGMNRLGFRPSEAPAAAAQLAAIPGVRVMDYVTHFANA-EQSAVHAPVTVDDQL 190

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
             +      +A LA++  IL  P    Q  R G++LYG +       ++  +   +T  A
Sbjct: 191 AAMGGLAREQACLANTGAILFHPEVQGQAVRAGVALYGVSPDEAVTSEALSLIPAMTLGA 250

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II +++   GE V YG +    R S IAV A GYADGYP ++             G   
Sbjct: 251 EIIALQQVRPGESVGYGSRWTAQRPSRIAVVACGYADGYPRSM-----------PDGAPV 299

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           +++G   P+ G ++MDM   D+TD    +VG  ++++G  I ++D+A   GT  Y+LL  
Sbjct: 300 WVEGSQAPLAGAVSMDMLTIDVTDIPEADVGSKVELWGRHIAVNDLARRCGTIGYELLCA 359

Query: 361 IGTRYA 366
           +  R  
Sbjct: 360 LARRVP 365


>gi|297569634|ref|YP_003690978.1| alanine racemase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925549|gb|ADH86359.1| alanine racemase [Desulfurivibrio alkaliphilus AHT2]
          Length = 380

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 106/379 (27%), Positives = 171/379 (45%), Gaps = 28/379 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++IDL AL+ N+ ++ +  +   R  AVVK +AYG G E  A A   AG   F V ++EE
Sbjct: 10  VEIDLKALRVNYEAVRSRVAPGIRIMAVVKADAYGHGLEAAAGAFAGAGADCFGVGTLEE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
           G++LR       + +L G  P +   + +  L PV+ +   L   S+     G      L
Sbjct: 70  GIRLRRAGLDGEVVLLLGFDPREAAEVVEYRLSPVVFAADGLEALSRLAADRGRQVGVHL 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++D G  R G++  +              +L+ ++SH   AD P +     +  +     
Sbjct: 130 KLDAGMGRFGVAPADLTRLAAIITGLPGLRLAGMMSHFPLADVPGAETRCREQWQLLQAG 189

Query: 187 SHYKGIEA-------SLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTV 235
                  A        +A+S+ +L  P  H  L RPGISLYG +            +Q  
Sbjct: 190 GAVCLPPAGVARPLLHMANSAALLRFPWAHGDLVRPGISLYGYSPLPVELAAAGLALQPA 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  +R++ ++   AG  +SYG +      + +AV  +GYADGYP  +SG          
Sbjct: 250 MSLRSRVLQVKMLPAGYGISYGHRYVTPAPTRLAVLPVGYADGYPRGVSGR--------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  + G  VPILG I M+  M D++   +++ GD     G      I  D++A   G
Sbjct: 301 --AQVLLGGRRVPILGTICMNACMADVSALPAVQAGDEAVFLGRQGEEFIGADELADWHG 358

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T +Y+LL RIG    + YT
Sbjct: 359 TISYELLCRIGAMNQRLYT 377


>gi|126697057|ref|YP_001091943.1| alanine racemase [Prochlorococcus marinus str. MIT 9301]
 gi|126544100|gb|ABO18342.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9301]
          Length = 399

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 181/382 (47%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   AL+ N   +   L  N +  AVVK + YG   + +       G  +  V 
Sbjct: 26  QRAWIEVKGKALETNVRQLRTKLRKNCQFMAVVKADGYGHDAKVVCDYAIKGGASELGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           ++EEG+KLR +  +  I +L  ++      I F  +L+P ISS+ +    + +    G+ 
Sbjct: 86  TLEEGIKLRSFGVKKPILILGNLYTKRDLIISFKNDLMPTISSIRECLVCNNIGKHFGLK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS----HVNSV 177
               L+VDTG +RLG   ++ +       + +   +  I SHL+ AD+ ++     +   
Sbjct: 146 FSLHLKVDTGMSRLGFESKKFIQQFEKIKSFENISIEGIYSHLSSADENNALDSQSITQS 205

Query: 178 QLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q  +F  L+          I+  LA+S+G+LL  ++HF + R G+S+YG +   KI+K+ 
Sbjct: 206 QRLKFNELLKQINFDRNNEIKIHLANSAGMLLSKDFHFHMVRVGLSMYGYSPLAKIDKNL 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  ++ + ++  IR    G  VSYGG+    R + +AV +IGYADG P  LSG     
Sbjct: 266 LLKPALSLKVKVAFIRTIDKGVSVSYGGKFVSNRKTKLAVLSIGYADGVPRNLSGKI--- 322

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                   K        P +G ITMD  M DITDS  I+VG  + + G D    I   + 
Sbjct: 323 --------KVIHNNKFYPQVGSITMDQMMVDITDSKEIKVGSIMVLLGSDGDKTISPLEW 374

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           +  S T  +++L     R  K 
Sbjct: 375 SRKSNTIPWEILCSFKNRLPKV 396


>gi|225848038|ref|YP_002728201.1| alanine racemase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643355|gb|ACN98405.1| alanine racemase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 356

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 104/371 (28%), Positives = 163/371 (43%), Gaps = 28/371 (7%)

Query: 5   EFLR--LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFF 61
           +F+R    I+   LK N  ++   S N +  AVVK +AYG     ++  L +   V+ F 
Sbjct: 2   DFIRSVALINTENLKKNVENLYKFS-NKKIFAVVKADAYGHDACIVSKTLSSLDIVEGFC 60

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V +  EG  LR       I VL GI   + ++    +L PVIS         KL    + 
Sbjct: 61  VATGYEGYLLREAGITKPIIVLGGILKQELELFNRYSLTPVISDFSHFEVAQKLEHKKI- 119

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++ DTG  RLG    +           K  ++  I+SH   AD         Q+E 
Sbjct: 120 ---HIKFDTGMRRLGFYQSDIEKL---KEKIKDFEVEGILSHFPSADTDPD-YTKSQIEE 172

Query: 182 FRTLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           F+ ++       +     +S  ++         R GI++YG     +    +  V+T  +
Sbjct: 173 FKEIVKMLDVNPKYIHIQNSAGVVYDCPFCNTIRLGIAIYGEKPTQDYPVSLYPVMTVLS 232

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           ++I ++    G+ +SY G  K  RD  +AV + GYADG P +LS             G  
Sbjct: 233 KVISVKSVKKGDRISYCGTFKADRDMKVAVVSFGYADGLPRSLSN-----------KGYV 281

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYD 356
            I G    I+G ITMDMT+ D++D  ++ VGD + I G     +IK  D+A  SGT  Y+
Sbjct: 282 LINGKYCKIVGNITMDMTIVDVSDLDTVNVGDDVVIVGKLQDKEIKFSDIAKISGTIAYE 341

Query: 357 LLVRIGTRYAK 367
           ++  I  R  +
Sbjct: 342 IMCGISKRVIR 352


>gi|21674734|ref|NP_662799.1| alanine racemase [Chlorobium tepidum TLS]
 gi|25452782|sp|Q8KB67|ALR_CHLTE RecName: Full=Alanine racemase
 gi|21647945|gb|AAM73141.1| alanine racemase [Chlorobium tepidum TLS]
          Length = 383

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 101/368 (27%), Positives = 161/368 (43%), Gaps = 25/368 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 I L  L++N   + A++    R   +VK NAYG G  ++   L   GV+DF V 
Sbjct: 17  NLSEALISLGNLRHNLACIRAITGPQCRVMGIVKANAYGHGATQVTATLEAEGVRDFGVA 76

Query: 64  SVEEGVKLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCG 119
           ++ E ++L       P +RI        G   +     +   +          S   +CG
Sbjct: 77  NIYEAIELLQEHRMLPDSRILAFASPLAGHIDLYLQHGVEMTVCDHETARAAESIAAACG 136

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VDTG  RLG++ +EA +           +L+ I +H A +D       + QL
Sbjct: 137 RRLQVQLKVDTGMGRLGVTPEEAAELLELIEACPNLELTGIYTHFAESD-KPEGFTARQL 195

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--PM 232
           ERF  +   Y+      +    A+S  I+  P+    + RPGI LYG           P+
Sbjct: 196 ERFLHVTGAYERRTGKTVTKHAANSGAIISMPDARLDMVRPGILLYGCHPVDAAPSTVPV 255

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+  ++R+I +++  AG  +SY       + + IA  + GYADG+   LS        
Sbjct: 256 RPVMQFQSRVIFVKEVPAGTAISYNRTWSAPKATRIATISAGYADGFHRALSNQ------ 309

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASG 351
                 +  I G   P +G ITMD TM ++    S++VGD   +FG       + ALA+G
Sbjct: 310 -----ARVSIGGKSFPQVGTITMDQTMVNLGSDDSVKVGDTAVLFGWDGPSAGEQALAAG 364

Query: 352 TTNYDLLV 359
           T +Y+LL 
Sbjct: 365 TISYELLC 372


>gi|189913008|ref|YP_001964897.1| Alanine racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|189913337|ref|YP_001964566.1| Alanine racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
 gi|167777684|gb|ABZ95984.1| Alanine racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167781405|gb|ABZ99702.1| Alanine racemase [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 376

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 156/379 (41%), Gaps = 36/379 (9%)

Query: 12  DLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
             +A  +N      L    ++  AVVK NAYG G    A    +AG     V S+EE + 
Sbjct: 9   SRSAFSHNIALFRKLIGPKSKFTAVVKSNAYGHGLLATASIALDAGADYLGVNSLEEALS 68

Query: 71  LRLYTPQARIFVLYGIHP--GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           +R    +A I ++  I     +   + D N   ++S + ++   +KL          L+V
Sbjct: 69  IRRVFSKATILIMGSIPHLKERVAELADENFWVMVSRIEEMELLAKLSPTPK---IHLKV 125

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           DTG +RLG+  Q A         KKL    +     +  D      + +QL  F+  I  
Sbjct: 126 DTGMSRLGIPHQNAEVIAKEIAEKKLPLTGIATHFASTEDFTEHSHSMLQLGNFQDTIDT 185

Query: 188 ----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----------PMQ 233
                +  +    ASS+  +L       L R GISLYG    +               ++
Sbjct: 186 FAKHGFIDLICHCASSASAMLFSEARMDLVRVGISLYGLWPSLETKLSLSLMKKDVGMLK 245

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T + +I  I+    G  V YG   K T ++ +AV  +GY +G    LS         
Sbjct: 246 PALTWKTQIQHIQNLNPGTFVGYGSTFKTTHETRLAVVPVGYYEGLDRKLSNH------- 298

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G   + G    ILG+I M+MTM DIT     ++GD + I G      I  DD A  
Sbjct: 299 ----GYMLVHGERAKILGRICMNMTMLDITHIPDAKIGDDVVIIGKSGNEMISADDHATW 354

Query: 350 SGTTNYDLLVRIGTRYAKF 368
           +GT NY+++ +I   + + 
Sbjct: 355 TGTINYEVVTKILGSFPRI 373


>gi|212696143|ref|ZP_03304271.1| hypothetical protein ANHYDRO_00679 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676772|gb|EEB36379.1| hypothetical protein ANHYDRO_00679 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 367

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 152/376 (40%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  L   +DL  + NN   +   S N++  AV+K + YGLG  +IA  + +  +   
Sbjct: 1   MQENYLL---VDLDKILNNIKLIKEKSINSKICAVLKADGYGLGALEIAKYINDQ-IDYI 56

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V   +E   LR       I +L  +   + K+    N+   I  +      ++ +    
Sbjct: 57  AVAQFKEAKYLRENGIDKPILILGYLPIDKYKVCSSLNIDVGIYDLDYARKINESILD-- 114

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +    + +DTG  RLG    E           K        SH A AD+       +Q +
Sbjct: 115 TINCHILLDTGHTRLGFRDFEIE-KIKELKKFKKLNFIGAFSHFATADEKDLTYTKIQYQ 173

Query: 181 RFR---TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQ 233
           +F      I     ++    S++   +  N+   L R GI +YG              + 
Sbjct: 174 KFTYIIEKIKDDFDLKLVHISNTAASMEYNFKSDLLRLGIGIYGIYPSDYIREISKIKLC 233

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V   +A+I  I+    G  +SYG      +D  +A  +IGYADG+  + S +       
Sbjct: 234 QVFEFKAQISFIKDVRKGTSISYGRTYIAPKDIKVATVSIGYADGFKRSFSNI------- 286

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
               G+  + G +  ++G++ MD  M D++     ++GDYI ++ PDI  +  A    T 
Sbjct: 287 ----GEVLVNGKIAKVVGRVCMDQIMIDVSGI-DCKIGDYITLY-PDIYKE--ANKIHTI 338

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+L+  I  R  + Y
Sbjct: 339 AYELMTSISNRVPRIY 354


>gi|238760291|ref|ZP_04621434.1| Alanine racemase 1 [Yersinia aldovae ATCC 35236]
 gi|238701493|gb|EEP94067.1| Alanine racemase 1 [Yersinia aldovae ATCC 35236]
          Length = 343

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 99/338 (29%), Positives = 154/338 (45%), Gaps = 18/338 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
               ID  AL++N   +  ++  +R  AVVK NAYG G  +IA  L +     + V  + 
Sbjct: 4   ATAVIDRRALRHNLQQIRHIAPQSRLIAVVKANAYGHGLLEIAHTLQD--ADCYGVARIG 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR       I +L G    ++  I   N I       +     + +         +
Sbjct: 62  EALMLRSGGIVKPILLLEGFFAAEDLPILVANRIETAVHSIEQLEALENVQLPAPINVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F    S    + Q   I+SH + AD+P       QL  F   
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYQRLSACDNVIQPVNIMSHFSRADEPQVETTRQQLSCFDAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARI 242
            +   G++ S+A+S GILL P  H    RPGI LYG +         + +   +  ++ +
Sbjct: 182 TAGKPGMK-SIAASGGILLWPEAHRDWVRPGIILYGVSPLDSPHASHYNLLPAMALKSSL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R+  AGE V YGG     RD+ + V AIGY DGYP +              G    I
Sbjct: 241 IAVREHKAGEPVGYGGTWVSDRDTRLGVVAIGYGDGYPRSA-----------PSGTPVRI 289

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
            G  V ++G+++MDM   D+    S +VGD + ++G D
Sbjct: 290 NGREVGLVGRVSMDMISVDLGPDASDKVGDEVLLWGSD 327


>gi|42518359|ref|NP_964289.1| alanine racemase [Lactobacillus johnsonii NCC 533]
 gi|32329446|emb|CAD70179.1| alanine racemase [Lactobacillus johnsonii]
 gi|41582644|gb|AAS08255.1| alanine racemase [Lactobacillus johnsonii NCC 533]
          Length = 376

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 141/382 (36%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N    M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNLKNEMGHLEPGQKMLAVVKANGYGHGSVEVARVADKVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    N+   + ++  L    K      + 
Sbjct: 66  AILDEALELRRADITKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKEAEKYLKDANLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEDADFITANEFLENNDNFFIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +        L R GI +YG     N + P       
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHDGIKSDLVRFGIGIYGLNPSSNPNSPDLKSNIK 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHQGDGVGYGSTFVADEDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I          +   A
Sbjct: 301 -------KVKVGDTYCPIVGRICMDQFMVKMPKKMPV--GTKVTIISSNPNDQNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|241895832|ref|ZP_04783128.1| possible alanine racemase [Weissella paramesenteroides ATCC 33313]
 gi|241870875|gb|EER74626.1| possible alanine racemase [Weissella paramesenteroides ATCC 33313]
          Length = 522

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 155/375 (41%), Gaps = 23/375 (6%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +     ++I   A++ N   +  L+G     A+VK NAYG G  ++  A  +A V  F V
Sbjct: 157 TRRPAWIEISENAIQKNIAVIRELTGAHHFIAIVKANAYGHGMAQVLTAAKHANVDGFGV 216

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +++EG+ LR Y     IF+L          +    LIPV++S   L      +S   S 
Sbjct: 217 ATIDEGIWLRQYGILEPIFILGVTPVTYVDDLVKYQLIPVVTSEAWLNAAVNKLSSQASL 276

Query: 123 PYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
             ++ VDTG  R+G+    E               L  I  H A AD+        Q++ 
Sbjct: 277 VISIGVDTGMGRIGIRHHDELQRVVEKINQTDQLILKGIGMHFATADEKDEAYYQKQVQT 336

Query: 182 FRTLISH---YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--TVV 236
           +  L+      + I   LA+S+  L          R G ++YG      +    Q    +
Sbjct: 337 WHELVDDLPLPQHIWYHLANSATALWHEQPSRDAIRVGAAMYGFNPSGKEMLASQLTPAL 396

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A ++ +++A AG  +SYG   +  +   I    +GYADGY   L G+          
Sbjct: 397 TLKAELVHVKQAEAGASISYGATYQTKQPEWIGTLPLGYADGYARQLQGMYGL------- 449

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
                  G  V I+G+I MD  M  + + +   +G  I + G     +I L D+A    T
Sbjct: 450 ----LPDGRHVEIIGRIAMDQLMVRLPEEMP--IGTVITLIGKAGDEEITLVDLAERLNT 503

Query: 353 TNYDLLVRIGTRYAK 367
             Y++   + TR  +
Sbjct: 504 IPYEIATSLSTRLPR 518


>gi|114799438|ref|YP_761112.1| alanine racemase [Hyphomonas neptunium ATCC 15444]
 gi|114739612|gb|ABI77737.1| alanine racemase [Hyphomonas neptunium ATCC 15444]
          Length = 396

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 128/371 (34%), Positives = 192/371 (51%), Gaps = 15/371 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++E  RL ID+ A+  N+  + A+   AR AAVVK +AYGL   +IAP L   G +DFFV
Sbjct: 24  TDEAGRLTIDMGAIAANYRRLRAMHPAARVAAVVKADAYGLDATQIAPMLAGQGARDFFV 83

Query: 63  TSVEEGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-V 120
             + E + L+    P A +FVL G+ PG E +  +  ++PV+++  Q   +  L      
Sbjct: 84  AHLAEALVLKPLLPPDAVLFVLNGLAPGSEPLCAEAGILPVLNTPEQARAWYTLAVNKAH 143

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             P ALQVDTG +RLGLS  E  D            + L+++H+ACAD P +  N+ Q+ 
Sbjct: 144 PVPAALQVDTGMSRLGLSEGELNDVLGWPSFAGQVNICLLMTHMACADTPGAPANADQMR 203

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RF    +    +  SLA+S+  +  P     + RPG+ LYG          MQ  +  EA
Sbjct: 204 RFADFAARLPSVPRSLANSAAAMFLPEAAGDVLRPGLVLYGVDPGAGGVPKMQPAIALEA 263

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII +R   AG  V YG      R   +A  + GYADG+P  LS            GG  
Sbjct: 264 RIIQLRHIPAGAGVGYGFDYIADRPLRVATLSAGYADGWPRALSN-----------GGAT 312

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           +  G+ +PILG+++MD  M D+T+     I  GD +++ GP   ++D+A    TT +++L
Sbjct: 313 WFAGHRLPILGRVSMDSCMVDVTNLPEGSIRPGDCVELIGPHQSVNDLARQLATTPHEIL 372

Query: 359 VRIGTRYAKFY 369
             +G R+ + Y
Sbjct: 373 TSLGRRFTRSY 383


>gi|325124086|gb|ADY83609.1| alanine racemase 2, PLP-binding, catabolic [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 367

 Score =  246 bits (628), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 87/373 (23%), Positives = 142/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L GI  P          L   I S  Q+ +  K         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFNIHSEAQIEWVEKHAYPA-QFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         + H + AD           Q+  
Sbjct: 120 VCLKMNSGMNRLGFKPQHYVQAWERLNNLANVSKITHMMHFSDADGERFGQQGIDYQINA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYARSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVAEQLMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+++MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTIGRVSMDMLAVDLTGIDSAKVGSEVVLWGQSSKGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|126699232|ref|YP_001088129.1| serine/alanine racemase [Clostridium difficile 630]
 gi|254975261|ref|ZP_05271733.1| serine/alanine racemase [Clostridium difficile QCD-66c26]
 gi|255092651|ref|ZP_05322129.1| serine/alanine racemase [Clostridium difficile CIP 107932]
 gi|255314388|ref|ZP_05355971.1| serine/alanine racemase [Clostridium difficile QCD-76w55]
 gi|255517066|ref|ZP_05384742.1| serine/alanine racemase [Clostridium difficile QCD-97b34]
 gi|255650170|ref|ZP_05397072.1| serine/alanine racemase [Clostridium difficile QCD-37x79]
 gi|260683293|ref|YP_003214578.1| serine/alanine racemase [Clostridium difficile CD196]
 gi|260686889|ref|YP_003218022.1| serine/alanine racemase [Clostridium difficile R20291]
 gi|115250669|emb|CAJ68493.1| Alanine racemase 1 [Clostridium difficile]
 gi|260209456|emb|CBA62968.1| serine/alanine racemase [Clostridium difficile CD196]
 gi|260212905|emb|CBE04150.1| serine/alanine racemase [Clostridium difficile R20291]
          Length = 712

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 106/377 (28%), Positives = 163/377 (43%), Gaps = 29/377 (7%)

Query: 5   EFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++IDL  L++N   +  A+  +    AVVK NAYG    ++A      GV+ F V 
Sbjct: 344 NRAWIEIDLNNLEHNVKMIQKAMPEDCELMAVVKANAYGHSAFEVATCANQIGVKAFAVA 403

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++EG+ LR Y     I +L   +P + K   + +   +  SV  L     L     +  
Sbjct: 404 TIDEGIDLRRYGILGEILILGYTNPIRAK---ELHKYNLTQSVIDLNHAISLNKQKYNIK 460

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLER 181
             +++DTG +RLG  + +          K L    +           D      + Q+E 
Sbjct: 461 SHIKIDTGMHRLGFDVNDVRSILKAFKLKYLDICGIFTHLCVSDSLKDEDVDFTNKQIEC 520

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           F  LI        K  +  + SS G    PN      R GI+LYG     N        +
Sbjct: 521 FYKLIDFLLKKGIKIPKVHIQSSYGFFNYPNLKCNYVRIGIALYGILSSPNDTTKLQLDL 580

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ ++++ILIRK    +   YG     +RDS+IA+ +IGYADG P  LS        
Sbjct: 581 RPVLSLKSQVILIRKIQKDDSFGYGRVFIASRDSVIAILSIGYADGIPRNLS-------- 632

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    I G    I+G+I MD    DITD  ++EVG+   I G D    +   +VA 
Sbjct: 633 --CGKSYVIINGCRAAIVGRICMDQLAVDITDIPNVEVGNTAIIIGRDNLSELSASEVAN 690

Query: 349 ASGTTNYDLLVRIGTRY 365
            S + + +LL R+G R 
Sbjct: 691 NSCSISNELLSRVGRRL 707


>gi|110597832|ref|ZP_01386115.1| alanine racemase [Chlorobium ferrooxidans DSM 13031]
 gi|110340557|gb|EAT59040.1| alanine racemase [Chlorobium ferrooxidans DSM 13031]
          Length = 383

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 148/378 (39%), Gaps = 25/378 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                 + +  L  N   +    G   R   +VK NAYG    K++ AL   G+ DF V 
Sbjct: 17  NMTEALVCIDHLLWNTRLIRKQVGETPRIMGIVKANAYGHNVHKVSAALETIGITDFGVA 76

Query: 64  SVEEGVKLRLYT---PQARIFVLYGIHPGQEKIIFDTNLIPV-ISSVPQLTFYSKLMSCG 119
           ++ E ++L+        A I           +     ++      S           +  
Sbjct: 77  NIHEAIELKTGGALKNPASILAFSSPLTSHIECFLQHDIDMTLCDSETLQAAEEIAAAHN 136

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            +    L+VDTG  RLG     A++      N +  QL  I +H A +  P     + QL
Sbjct: 137 KTLSVQLKVDTGMGRLGTHPSMAMELLRCMENAEHLQLKGIYTHFADSSSPGG-FTAQQL 195

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--M 232
             F+ L S Y+      +    A+S  IL  P     + RPGI LYG     +      +
Sbjct: 196 AEFKRLTSEYEHAVSRTVCKHAANSGAILTAPGSWLDMVRPGILLYGYHPAKHTPLRLEV 255

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+  EA++I I+   AG  +SY           IA  A GYADGY   LSG       
Sbjct: 256 KPVMQVEAKVIFIKTVEAGTTLSYNRTWSAPTLRSIATIAAGYADGYARVLSG------- 308

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASG 351
                    I G   P +G +TMD  M D+     ++ GD   +FG      + ++  +G
Sbjct: 309 ----KATVMINGKPYPQVGTVTMDQIMVDLGTEHDVKKGDRATLFGWDGPSAEALSEIAG 364

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+ L  + +R  + +
Sbjct: 365 TISYETLCSVSSRVKRIF 382


>gi|255100756|ref|ZP_05329733.1| serine/alanine racemase [Clostridium difficile QCD-63q42]
          Length = 712

 Score =  246 bits (627), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 106/377 (28%), Positives = 163/377 (43%), Gaps = 29/377 (7%)

Query: 5   EFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++IDL  L++N   +  A+  +    AVVK NAYG    ++A      GV+ F V 
Sbjct: 344 NRAWIEIDLNNLEHNVKMIQKAMPEDCELMAVVKANAYGHSAFEVATCANQIGVKAFAVA 403

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++EG+ LR Y     I +L   +P + K   + +   +  SV  L     L     +  
Sbjct: 404 TIDEGIDLRRYGILGEILILGYTNPIRAK---ELHKYNLTQSVIDLNHAISLNKQKYNIK 460

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLER 181
             +++DTG +RLG  + +          K L    +           D      + Q+E 
Sbjct: 461 SHIKIDTGMHRLGFDVNDVRSILKAFKLKYLDICGIFTHLCVSDSLKDEDVDFTNKQIEC 520

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           F  LI        K  +  + SS G    PN      R GI+LYG     N        +
Sbjct: 521 FYKLIDFLLKKGVKIPKVHIQSSYGFFNYPNLKCNYVRIGIALYGILSSPNDTTKLQLDL 580

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ ++++ILIRK    +   YG     +RDS+IA+ +IGYADG P  LS        
Sbjct: 581 RPVLSLKSQVILIRKIQKDDSFGYGRVFIASRDSVIAILSIGYADGIPRNLS-------- 632

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    I G    I+G+I MD    DITD  ++EVG+   I G D    +   +VA 
Sbjct: 633 --CGKSYVIINGCRAAIVGRICMDQLAVDITDIPNVEVGNTAIIIGRDNLSELSASEVAN 690

Query: 349 ASGTTNYDLLVRIGTRY 365
            S + + +LL R+G R 
Sbjct: 691 NSCSISNELLSRVGRRL 707


>gi|254785046|ref|YP_003072474.1| alanine racemase [Teredinibacter turnerae T7901]
 gi|237683511|gb|ACR10775.1| alanine racemase [Teredinibacter turnerae T7901]
          Length = 382

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 123/377 (32%), Positives = 191/377 (50%), Gaps = 21/377 (5%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L I+L+ +  NW ++N   S      AVVK +AY LG  ++ PALY AG + F+V ++ E
Sbjct: 5   LTINLSKIAANWQALNRFVSAPVDCGAVVKADAYSLGMAEVLPALYLAGCRTFYVANLGE 64

Query: 68  GVKLRLYTPQAR-------IFVLYGIHPGQEKIIFDTNLIPV-ISSVPQLTFYSKLMSCG 119
            +  R              I VL G  PG+E+   D  L+PV +S+     + +      
Sbjct: 65  ALDARGILSDVCGSYSDVAIVVLGGCAPGEERRFIDYRLVPVLVSTAMLERWCTVNGGEH 124

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+++TG  RLGL   E      +        + +++SHLACAD+P   +N+ QL
Sbjct: 125 NVLGSILKLNTGMGRLGLEPAEFERVVQDPAYLARADVRMLMSHLACADEPEHSLNAEQL 184

Query: 180 ERFRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQT 234
           +RFR  +      Y+ + ASLA+S+G+ LG +YHF   RPG+ LY    + +     ++T
Sbjct: 185 QRFRRALDVSSERYRPLTASLANSAGVCLGGDYHFNAVRPGLGLYTSFAQADACGLGLET 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            V     ++ +R   AGE V YG   +  RD+ +AV A GYADG    LS        + 
Sbjct: 245 AVELHLPVVQVRNLPAGESVGYGATYRAERDARLAVVAGGYADGLFRALSNRAHCWVCAP 304

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGT 352
              G     G+ VP++G+I+MD T+ DI+      +  G  I+  G  + LDD+A ++ T
Sbjct: 305 SGAG-----GWRVPVVGRISMDTTIVDISAVPEGVVAEGSRIEFIGEHVPLDDLAASAQT 359

Query: 353 TNYDLLVRIGTRYAKFY 369
            NY++L  +G RY + Y
Sbjct: 360 INYEILTSLGVRYKRHY 376


>gi|260102331|ref|ZP_05752568.1| alanine racemase [Lactobacillus helveticus DSM 20075]
 gi|260083864|gb|EEW67984.1| alanine racemase [Lactobacillus helveticus DSM 20075]
          Length = 376

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 142/381 (37%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +K++L A++ N    M  L  N +  AVVK N YG G  ++A      G   F V 
Sbjct: 7   RPAVVKVNLGAIRRNIKNEMQHLEPNQKMLAVVKANGYGHGAVEVAKVAEEEGAAGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSH 122
            ++E ++LR       I VL  + P    I    N+   + ++  L    K      +  
Sbjct: 67  ILDEALELRRADIVKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKDAEKYLAKENLQL 126

Query: 123 PYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +D+G  R+G +   E +       N     +  + +H A AD         Q E+
Sbjct: 127 KIHLGIDSGMGRIGFNEDDEFVAANKFLENNDNFFIEGMFAHFASADSDDETYFKHQCEK 186

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------- 232
           F+ + S        +   +++  +        L R GI +YG     N S P        
Sbjct: 187 FKHMKSLLTVKPKWIHVDNTAASIFHSGIKSDLVRFGIGIYGLNPSSNPSSPDLTSAIEL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +  E+ +  ++    G+ V YG       D++I    +GYADG+     G       
Sbjct: 247 EPALLFESELTHVKTIHKGDGVGYGSTFMAEEDTIIGTVPVGYADGWIRKYQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 K  +     PI+G+I MD  M  +   + +  G  + I   +      +   A 
Sbjct: 301 ------KVKVGDEYCPIVGRICMDQFMVKMPKKMLV--GTKVVIISNNPSDPNNIKAAAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y++   +  R  + Y
Sbjct: 353 YVDTIHYEVACLLNDRLPRVY 373


>gi|77361350|ref|YP_340925.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876261|emb|CAI87483.1| alanine racemase 1, PLP-binding, biosynthetic [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 330

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 21/343 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-QE 91
            AV+K NAYG G   IA  L +     F V  ++E + LR       I +L G       
Sbjct: 1   MAVLKANAYGHGLVTIAQHLND--ADAFAVARIDEALALRAGGLTKPIVLLEGFFDEADL 58

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SF 150
            I+   N   +I    QL                L+++TG +RLG++ ++  +F +    
Sbjct: 59  PILLANNFQTIIHDENQLAALE-NAQLEAPINCWLKINTGMHRLGIAPEQFDEFYNRLQK 117

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHF 210
                    +++H +CADD  S     Q+  F   ++        L++S+GIL  P+ H 
Sbjct: 118 TANANNTVNLMTHFSCADDVDSSKTMQQIALFNR-LAENVEQAHCLSNSAGILAWPSGHG 176

Query: 211 QLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSL 267
              RPG+ LYG +   N   K++ ++ V+    ++I +R   A E V Y G+ +  + + 
Sbjct: 177 DWVRPGLMLYGVSPMANTTGKTYQLEPVMRLTTKVIAVRNVAAHEAVGYSGRWQSDKPTQ 236

Query: 268 IAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-L 326
           +AV A+GY DGYP                G    I      I+G + MDM   DI ++  
Sbjct: 237 LAVVAMGYGDGYPRHA-----------RAGTPVIINKQRYGIVGSVAMDMITLDIGNNTH 285

Query: 327 SIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +I+VGD + ++GP++ ++++A  + T  Y+LL  I  R +  Y
Sbjct: 286 NIKVGDEVTMWGPELPVEEIAQCADTIPYELLCNITPRVSYQY 328


>gi|326692184|ref|ZP_08229189.1| alanine racemase [Leuconostoc argentinum KCTC 3773]
          Length = 375

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 101/378 (26%), Positives = 165/378 (43%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L +DL A++ N   + A +G  R  AVVK +AYG G   +  ALY  GV+DF V +
Sbjct: 11  RPSWLTVDLAAIQYNAKQIMAHAGAIRLIAVVKADAYGHGAVAVTTALYEIGVRDFAVAT 70

Query: 65  VEEGVKLRLYTP-QARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + EGV LR   P      +L G+   Q   ++    L P + ++  L    +L++     
Sbjct: 71  IAEGVALRQQVPYDDFNIILLGVQDVQYVPVMVSQRLTPAVGTLAWLDEAEQLLNSDDQL 130

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNS-FNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R+G   + AL   ++   +    QLS + +H A ADD +      Q+  
Sbjct: 131 MIQLAVDTGMGRMGAHSEAALQEMYDKVLDTPSLQLSGVFTHFATADDTNQAYYDQQVAN 190

Query: 182 FRTLIS--HYKGIEASLASSSGILLGPNYHFQ-LTRPGISLYGGT---DKINKSHPMQTV 235
           F   ++          LA+S   L   +       R G  LYG      ++     ++ V
Sbjct: 191 FNAWVTAVGIPKQYWHLANSGSALWHHDQIETGTIRVGSVLYGYNPGAPELPMPVALKNV 250

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ ++RI  + +  AGE VSYG     T    +A   IGYADGY   + G+         
Sbjct: 251 LSLKSRIGAVHQLQAGESVSYGATYTATEPQWVATLPIGYADGYLRRMGGMT-------- 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 + G+   ++G++TMD  +  +     +  G  + + G D    I ++D A  + 
Sbjct: 303 ----VLVNGHEEKVIGRVTMDQIVITLDRDYPV--GTVVTLIGQDGDAEITVEDFAQYAQ 356

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L   G R  + Y
Sbjct: 357 TIPHEILTTFGPRLPRIY 374


>gi|255306640|ref|ZP_05350811.1| serine/alanine racemase [Clostridium difficile ATCC 43255]
          Length = 712

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 106/377 (28%), Positives = 163/377 (43%), Gaps = 29/377 (7%)

Query: 5   EFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++IDL  L++N   +  A+  +    AVVK NAYG    ++A      GV+ F V 
Sbjct: 344 NRAWIEIDLNNLEHNVKMIQKAMPEDCELMAVVKANAYGHSAFEVATCANQIGVKAFAVA 403

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++EG+ LR Y     I +L   +P + K   + +   +  SV  L     L     +  
Sbjct: 404 TIDEGIDLRRYGILGEILILGYTNPIRAK---ELHKYNLTQSVIDLNHAISLNKQKYNIK 460

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLER 181
             +++DTG +RLG  + +          K L    +           D      + Q+E 
Sbjct: 461 SHIKIDTGMHRLGFDVNDVRSILKAFKLKYLDICGIFTHLCVSDSLKDEDVDFTNKQIEC 520

Query: 182 FRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPM 232
           F  LI        K  +  + SS G    PN      R GI+LYG     N        +
Sbjct: 521 FYKLIDFLLKKGIKIPKVHIQSSYGFFNYPNLKCNYVRIGIALYGILSSPNDTTKLQLDL 580

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V++ ++++ILIRK    +   YG     +RDS+IA+ +IGYADG P  LS        
Sbjct: 581 RPVLSLKSQVILIRKIQKDDSFGYGRVFIASRDSVIAILSIGYADGIPRNLS-------- 632

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    I G    I+G+I MD    DITD  ++EVG+   I G D    +   +VA 
Sbjct: 633 --CGKSYVIINGCRAAIVGRICMDQLAVDITDIPNVEVGNTAIIIGRDNLSELSASEVAN 690

Query: 349 ASGTTNYDLLVRIGTRY 365
            S + + +LL R+G R 
Sbjct: 691 NSCSISNELLSRVGRRL 707


>gi|302344277|ref|YP_003808806.1| alanine racemase [Desulfarculus baarsii DSM 2075]
 gi|301640890|gb|ADK86212.1| alanine racemase [Desulfarculus baarsii DSM 2075]
          Length = 381

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 164/381 (43%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            + +L IDL A+ +N  ++  +     R A  VK + YG G   +A  L  AG +   V 
Sbjct: 8   PYNKLTIDLEAIAHNLRALRTIMPKGLRVAGTVKSDGYGHGMVAVARKLKEAGAEFLAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
              EG  LR      +I +L G+HP +        L PV+  +  +   S + +  G+  
Sbjct: 68  HAAEGAVLRREGLAGQILLLLGLHPSEMTQAARLRLTPVLFDLETMAALSDVATGLGLRA 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VDTG  RLG+  ++AL+    +   +  ++  + SHLA        +   Q   F
Sbjct: 128 QCHLKVDTGMGRLGVRPEDALELLRAARALRGLEVRGLTSHLATGGSADRAMADEQAAVF 187

Query: 183 RTLISHYKGIEASLASSSGILLGPNYH--------FQLTRPGISLYGGTDKINKS--HPM 232
             L++  +     L  SS    G              + R GI+LYGG      +    +
Sbjct: 188 GQLLAAARAEGFDLPDSSLCNSGGAMDPPAAAPGPPHVVRLGIALYGGLPDPAMAGRLDL 247

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +   +++I +R A  G+ VSYG   +   D+ + V  +GY DGYP   S        
Sbjct: 248 RGAMGLASQLIAVRPARRGQPVSYGCTWRADCDTWLGVVPLGYGDGYPRAASN------- 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFG----PDIKLDDVA 347
                G   + G   PI+G++ M++T+ D+       +VGD +   G     +I  D++A
Sbjct: 301 ----NGFMLVHGQRAPIVGRVCMNLTVLDLGGFDPLPQVGDEVVALGGQGADEITCDELA 356

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
               T +Y+++ R+G    + 
Sbjct: 357 SWCQTISYEIVCRLGAANPRI 377


>gi|268318829|ref|YP_003292485.1| hypothetical protein FI9785_335 [Lactobacillus johnsonii FI9785]
 gi|262397204|emb|CAX66218.1| alr [Lactobacillus johnsonii FI9785]
          Length = 376

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 143/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N  + M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNLENEMEHLEPGQKMLAVVKANGYGHGAVEVARVADKVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    N+   + ++  L    K      + 
Sbjct: 66  AILDEALELRRADITKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKEAEKYLKDANLQ 125

Query: 122 HPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEYADFIAANEFLENNDNFFIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINK-------SHP 231
           +F  + S        +   +++  +        L R GI +YG     N        + P
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHDGIKSDLVRFGIGIYGLNPSSNPNSSDLKSNIP 245

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHQGDGVGYGSTFIADEDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I          +   A
Sbjct: 301 -------KVKVGDTYCPIVGRICMDQFMVKMPKKMPV--GTKVTIISSNPNDQNNIKVAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|110835047|ref|YP_693906.1| alanine racemase [Alcanivorax borkumensis SK2]
 gi|123149285|sp|Q0VMG4|ALR_ALCBS RecName: Full=Alanine racemase
 gi|110648158|emb|CAL17634.1| alanine racemase, catabolic [Alcanivorax borkumensis SK2]
          Length = 353

 Score =  246 bits (627), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 107/367 (29%), Positives = 165/367 (44%), Gaps = 22/367 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R++I L AL+NN      L+G+A+  A+VK N YG G    A  + ++ V    V  
Sbjct: 2   RGTRVEIRLAALRNNALRAAELAGDAQVFAMVKANGYGHGLLLAAETMLDS-VSGLGVAV 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQE-KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E   LR +     I V  G    +E +     +L  V+ S+ Q+      ++      
Sbjct: 61  LDEARTLREHGIALPILVAEGFFDAEELEAAARLSLEVVVHSLWQVELL---LANPCPVR 117

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V+ G NRLGL   EAL       ++       ++SH ACAD      +  QL    
Sbjct: 118 IWLKVNAGMNRLGLRPNEALSAAAR-LSQAGNAPVGVMSHFACADMDEDIHSEKQLLL-A 175

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEA 240
             ++    +  S ++S+ +L  P  H Q  RPGI LYG +           +Q      A
Sbjct: 176 GSVAEQLQLPLSASNSAALLRYPRAHAQRVRPGIMLYGSSPFNWQTAAELGLQVSHRFSA 235

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+I I    AGE V YG     +    I V A+GY DGYP                G   
Sbjct: 236 RLIAINAVEAGESVGYGATWTASDPRQIGVVAVGYGDGYPRHA-----------PSGTPV 284

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G +  ++G+++MDM   D+T   S  VGD ++++G  + +DDVA A GT +Y+L  +
Sbjct: 285 AVNGVVTTLVGRVSMDMITIDVTGL-SASVGDEVELWGDVVDVDDVARACGTISYELFCQ 343

Query: 361 IGTRYAK 367
           I  R  +
Sbjct: 344 ITQRPER 350


>gi|159904188|ref|YP_001551532.1| alanine racemase [Prochlorococcus marinus str. MIT 9211]
 gi|159889364|gb|ABX09578.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9211]
          Length = 381

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 99/381 (25%), Positives = 165/381 (43%), Gaps = 28/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   A++ N  ++           AVVK + YG G + +A +    G Q   V 
Sbjct: 10  QRAWVEVKPAAIEANTRNIKQRLPKQCMLMAVVKADGYGHGAQTVAKSALEGGAQSLGVA 69

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--S 121
           +++EG+ LR    ++ I +L  +   ++     +  +    S  +       ++     +
Sbjct: 70  TLQEGIDLRQAGIKSPILLLGNLTNEEDLDACLSWNLMPTISDYREAVICHKIAEERVQT 129

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS----HVNSV 177
               ++VDTG  RLG  L +A    +   + +   L  + SHLA AD         V   
Sbjct: 130 FAVHVKVDTGMTRLGCELSDAPSLLNFIDDLRFLDLEGVYSHLALADGDFDGEGGRVTFH 189

Query: 178 QLERFRTLIS----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
           Q ++F  L+       K I   LA+S+G L     ++ + R GI+LYG +    +     
Sbjct: 190 QKQKFDNLLKSISLKNKSIVRHLANSAGTLRDCGLYYDMVRVGIALYGYSPIESLKNDFS 249

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +  +ARI LIR+  AG  VSYG        S +AV  IGYADG    LSG  S   
Sbjct: 250 LEPALAVKARITLIREVPAGTGVSYGHTFITKEQSRLAVVGIGYADGVGRALSGKIS--- 306

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     I G + P +G ITMD  + DIT +L I VG+ + + G D    +     +
Sbjct: 307 --------VLINGKLFPQVGAITMDQLVIDITGNLDISVGNVVTLLGFDQGRSLSPYYWS 358

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
             SG+  +++L     R  + 
Sbjct: 359 DISGSIPWEILCGFKYRLPRV 379


>gi|317011147|gb|ADU84894.1| alanine racemase [Helicobacter pylori SouthAfrica7]
          Length = 377

 Score =  245 bits (626), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 166/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D ++L++N++++  A+  +    AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVDTSSLRHNFNAVKNAIPKDTHIMAVVKANAYGVGAIKASEIFLQEGAHYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L        +++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRFHFPKTPILILGYSPNSNAQMLVDNHLSAMIFSLEQAEIFSQIALKSKKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSVEIIKKIRALKGLEVEGIFTHLSNADANIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           +     + IE     +       S      N    L RPGI LYG               
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNNNENRFLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 234 -TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             VV+ +A+I+ I++   GE V YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVVSLKAQIVQIKRVKKGEFVGYGKHFYTNEETLVGVLALGYADGLARALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 +  I   + P++ K+ MD     + D +  + GD + +FG         +++A 
Sbjct: 303 ------QVVINNQLAPLIAKVCMDQCFIKL-DGIEAKEGDEVILFGDKSTRANDANEIAT 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+++  +  R  + Y
Sbjct: 356 LLNTIPYEVISTLSKRLERVY 376


>gi|46143476|ref|ZP_00135191.2| COG0787: Alanine racemase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
          Length = 343

 Score =  245 bits (626), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 92/350 (26%), Positives = 154/350 (44%), Gaps = 31/350 (8%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE--- 91
           ++K NAYG G    A  L +  V+ F V  + E ++++      +I ++ G    +E   
Sbjct: 1   MIKANAYGQGLLPAADTLADL-VEGFGVARLREALEIQETGYTGKILLIEGFFDREELLK 59

Query: 92  --KIIFDTNLIPVIS------------SVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
                FDT +                    Q  F+ +           L++DTG +RLG+
Sbjct: 60  TLSRRFDTVIHCQEQLELLEQVAEEWQQEQQKGFWKRKAKIYFPINVWLKIDTGMHRLGV 119

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
             ++   F        L +    +SH + AD+P       Q+  F    S Y   E S++
Sbjct: 120 HPEQVDMFYQRLKACPLVESISFVSHFSRADEPDCGYTEKQIAIFEAATSPYPTHERSIS 179

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVTAEARIILIRKALAGELVS 255
           +SSGIL     H+   RPGI ++G +           + V+T  + +I +R   AGE V 
Sbjct: 180 ASSGILYWKQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVG 239

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           YGG     +D+ + V A+GY DGYP                G    + G +VPI+G+++M
Sbjct: 240 YGGTWISDKDTKLGVVAMGYGDGYPRNA-----------PEGTPVLVNGRIVPIVGRVSM 288

Query: 316 DMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           DM   D+      +VGD +  +G D+ +++VA   G  +Y+L+ ++  R 
Sbjct: 289 DMLTVDLGADSQDKVGDEVIFWGKDLLIEEVAQHIGVISYELITKLTPRV 338


>gi|167756231|ref|ZP_02428358.1| hypothetical protein CLORAM_01761 [Clostridium ramosum DSM 1402]
 gi|237734175|ref|ZP_04564656.1| alanine racemase [Mollicutes bacterium D7]
 gi|167704223|gb|EDS18802.1| hypothetical protein CLORAM_01761 [Clostridium ramosum DSM 1402]
 gi|229382735|gb|EEO32826.1| alanine racemase [Coprobacillus sp. D7]
          Length = 357

 Score =  245 bits (625), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 90/372 (24%), Positives = 161/372 (43%), Gaps = 20/372 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHS-MNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQ 58
           M  +     +I+L  LK N  +            AV+K +AYG G  ++A  + +   ++
Sbjct: 1   MSLHRDTYAEINLKYLKENIETTYKKFKRP--LMAVIKADAYGHGYREVATYIKDIEYLE 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMS 117
            F V ++ E ++LR       I +L  +   +E+I         ++ +      + + + 
Sbjct: 59  MFAVATLPEAIELRELGITKGILILGAVPTSKEEIDLAIKYDISLTMISLDYMHHLETLI 118

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   +++DTG +R+GL+ +  LD   N+ +     L  I +H A AD   +     
Sbjct: 119 DQQPLKIHIKLDTGMHRIGLTSKAQLDEMLNTIDYNKFILEGIFTHYATADGEQAAF-DQ 177

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           Q E F  L++ +K       +S+ +    +    L R GI +YG     N++   + V++
Sbjct: 178 QRELFYDLVADHKFKYIHCCNSAAMAYHHDDRSNLGRIGIIMYGIDPAGNETKEFKQVMS 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +++ LI+K  AG+ V YG       D  +A   IGYADG      G +          
Sbjct: 238 LYSKVALIKKIKAGDRVGYGLTYTADEDEYLATIPIGYADGLIRKNQGRN---------- 287

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
              +I G    I+G++ MD  M  +    +I+ GD ++IFG  I L  +A    T  Y++
Sbjct: 288 --VYINGKYFEIVGRVCMDQIMVRV--DETIKEGDKVEIFGAHISLASMARELETIPYEI 343

Query: 358 LVRIGTRYAKFY 369
           +  I  R  + Y
Sbjct: 344 ICLITKRVDRLY 355


>gi|293573028|ref|ZP_06683970.1| alanine racemase [Enterococcus faecium E980]
 gi|291606930|gb|EFF36310.1| alanine racemase [Enterococcus faecium E980]
          Length = 374

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 149/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 7   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++      
Sbjct: 67  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTREWLQAAAAILEESKLE 126

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD       ++Q
Sbjct: 127 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQSDDTYWNLQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 187 KERFMEVLKKLSELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 247 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 302 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 352

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 353 LGTIHYEVACGLGQRIPREY 372


>gi|78780004|ref|YP_398116.1| alanine racemase [Prochlorococcus marinus str. MIT 9312]
 gi|78713503|gb|ABB50680.1| alanine racemase [Prochlorococcus marinus str. MIT 9312]
          Length = 399

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   A+++N   +   LS + +  AVVK + YG   + ++      G     V 
Sbjct: 26  QRAWIEVKGKAIESNVRQLRSKLSKSCQFMAVVKADGYGHDAKVVSEYAIKGGASQLGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EG+ LR    +  I +L  ++      I F  +L+P ISS+ +    + +    G  
Sbjct: 86  TLKEGIMLRSSGVKKPILILGNLYAKRDLIISFKNDLMPTISSIRECLICNNIGKHFGSK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L+VDTG +RLG    + +       + +   +  I SHL+ AD+           +
Sbjct: 146 FSLHLKVDTGMSRLGFESNKFVQQFEKIKSFENISVEGIYSHLSSADEDNSLDPKSSTQI 205

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q  +F+       +     I+  LA+S+G+L+  ++HF + R G+S+YG +   KI+++ 
Sbjct: 206 QRLKFQELLQQINVDRNHNIKIHLANSAGMLINKDFHFHMVRVGLSMYGYSPLAKIDRNL 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  + ++  IR    G  VSYGG+    R + +AV +IGYADG P  LSG  +  
Sbjct: 266 SLKPALFLKVKVAFIRIIDQGVKVSYGGKFVSGRKTKLAVLSIGYADGVPRNLSGKIN-- 323

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                          + P +G ITMD  M DIT S  I++G  + + G D    I   D 
Sbjct: 324 ---------VIHNNELYPQVGSITMDQMMVDITGSDEIKIGSTMLLLGSDGDKTISPFDW 374

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  S T  +++L     R  + 
Sbjct: 375 ANQSNTIPWEILCSFKNRLPRV 396


>gi|260551290|ref|ZP_05825491.1| alanine racemase 2 PLP-binding [Acinetobacter sp. RUH2624]
 gi|260405604|gb|EEW99095.1| alanine racemase 2 PLP-binding [Acinetobacter sp. RUH2624]
          Length = 367

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 143/373 (38%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL+NN   +     N++  AVVK NAYG G E++  A        F +  
Sbjct: 3   RPITAVIHHQALQNNLVVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R       I +L G+  P          L   + S  Q+ +  K         
Sbjct: 61  LDEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTVHSEAQIEWVEKH-PYPAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   Q  +       N         ++H + AD           Q+  
Sbjct: 120 VFLKMNSGMNRLGFKPQHYVQAWERLNNLANVSKITHMTHFSDADGDRFGQQGIDYQITA 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  ++    G  +   S++ +           R GI LYG +            +Q  ++
Sbjct: 180 FEEIVKDLPGERSVSNSAAILRYQDQLKSDYARSGIMLYGSSPDYPTHSIADWGLQPTMS 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + II ++     E V YG      +   I + A GYADGY                 G
Sbjct: 240 LRSEIISVQHLEPNESVGYGSNFVTEQPMTIGIVACGYADGYQRI-----------SPTG 288

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               +       +G+I+MDM   D+T   S +VG  + ++G       + +DDVA++SGT
Sbjct: 289 TPVLVDSVRTRTIGRISMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGT 348

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 349 VGYELMCAVTARV 361


>gi|161506851|ref|YP_001576805.1| alanine racemase [Lactobacillus helveticus DPC 4571]
 gi|172048359|sp|A8YXI3|ALR_LACH4 RecName: Full=Alanine racemase
 gi|160347840|gb|ABX26514.1| Alanine racemase [Lactobacillus helveticus DPC 4571]
          Length = 376

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               +K++L A++ N    M  L  N +  AVVK N YG G  ++A      G   F V 
Sbjct: 7   RPAVVKVNLGAIRRNIKNEMQHLEPNQKMLAVVKANGYGHGAVEVAKVAEEEGAAGFCVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSH 122
            ++E ++LR       I VL  + P    I    N+   + ++  L    K      +  
Sbjct: 67  ILDEALELRRADIVKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKDAEKYLAKENLQL 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLER 181
              L +D+G  R+G +  +     +             + +H A AD         Q E+
Sbjct: 127 KIHLGIDSGMGRIGFNEDDEFVAANKFLENNNNFFIEGMFAHFASADSDDETYFKHQCEK 186

Query: 182 FRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------- 232
           F+ + S        +   +++  +        L R GI +YG     N S P        
Sbjct: 187 FKHMKSLLTVKPKWIHVDNTAASIFHSGIKSDLVRFGIGIYGLNPSSNPSSPDLTSAIEL 246

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G       
Sbjct: 247 EPALSFESELTHVKTIHKGDGVGYGSTFMAEEDTIIGTVPVGYADGWIRKYQGF------ 300

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 K  +      I+G+I MD  M  +   + +  G  + I   +      +   A 
Sbjct: 301 ------KVKVGDEYCSIVGRICMDQFMVKMPKKMLV--GTKVVIISNNPSDPNNIKAAAD 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T +Y++   +  R  + Y
Sbjct: 353 YVDTIHYEVACLLNDRLPRVY 373


>gi|157414132|ref|YP_001484998.1| alanine racemase [Prochlorococcus marinus str. MIT 9215]
 gi|157388707|gb|ABV51412.1| putative Alanine racemase [Prochlorococcus marinus str. MIT 9215]
          Length = 399

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 104/382 (27%), Positives = 177/382 (46%), Gaps = 29/382 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   +++   AL+ N   +   LS N +  AVVK + YG   + ++      G     V 
Sbjct: 26  QRAWIEVKGKALEINVRQLRTKLSKNCQFMAVVKADGYGHDAKVVSDYAIRGGASQLGVA 85

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
           +++EG+KLR +  +  I +L  ++      I F  +L+P ISS+ +    + +    G+ 
Sbjct: 86  TLKEGIKLRSFGVKKPILILGNLYTKKDLIISFKNDLMPTISSIRECFICNNIGKHFGLK 145

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD----PSSHVNSV 177
               L+VDTG +RLG    + +       + +   +  I SHL+ AD         +  +
Sbjct: 146 FSLHLKVDTGMSRLGFESNKFVQQFEKIKSLENISIDGIYSHLSSADAENALDPQSITQL 205

Query: 178 QLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSH 230
           Q  +F        +     I+  LA+S+G+LL  ++HF + R G+S+YG +   KI+K+ 
Sbjct: 206 QRLKFNQLLKQINLDRNNEIKIHLANSAGMLLNKDFHFNMVRVGLSMYGYSPLAKIDKNL 265

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  + ++  IR    G  VSYGG+   +R + +AV +IGYADG P  LSG  +  
Sbjct: 266 LLKPALFLKVKVAFIRIIEPGVSVSYGGKFVSSRKTKLAVLSIGYADGVPRNLSGKIN-- 323

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                          + P +G ITMD  M DIT S  I +G  + + G D    I   + 
Sbjct: 324 ---------VIHNNKLYPQVGSITMDQMMVDITGSNEIRIGSTMVLLGSDGDKTISPLEW 374

Query: 347 ALASGTTNYDLLVRIGTRYAKF 368
           A  S T  +++L     R  + 
Sbjct: 375 ATKSNTIPWEILCSFKNRLPRV 396


>gi|257899464|ref|ZP_05679117.1| alanine racemase [Enterococcus faecium Com15]
 gi|257837376|gb|EEV62450.1| alanine racemase [Enterococcus faecium Com15]
          Length = 374

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/380 (21%), Positives = 149/380 (39%), Gaps = 28/380 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  I   A+  N  + +  L       AVVK N YG G  + A A    G   F V
Sbjct: 7   HRPTKAVIHKKAITENVANEVARLPQGKELFAVVKANGYGHGAVETAEAAVAGGASGFCV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-- 120
           ++++EGV+LR       I +L  +      +    +L     +   L   + ++      
Sbjct: 67  SNLDEGVELREAGFTQPILILNMVPYDALALAVAHDLSVTAGTREWLQAAAAILEESKLE 126

Query: 121 -SHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+ DTG  R+G    +E  +        ++ +   + +H + AD       ++Q
Sbjct: 127 MPLSIHLKADTGMGRIGFCTPEEVKEAAAFIRESRVLEWEGLFTHFSTADQADDTYWNLQ 186

Query: 179 LERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQ 233
            ERF  ++     +   +   +S+  L        + R G+++YG       + + +P+Q
Sbjct: 187 KERFMEVLKKLSELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQ 246

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   + +I ++K  AGE + YG          I    IGYADG+   + G        
Sbjct: 247 PALELVSELIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWLRKMQGFSL----- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALA 349
                   ++G     +G++ MD  M  +     +  G  + + G     +I + DVA  
Sbjct: 302 -------LVEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDVADQ 352

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
            GT +Y++   +G R  + Y
Sbjct: 353 LGTIHYEVACGLGQRIPREY 372


>gi|329666669|gb|AEB92617.1| alanine racemase [Lactobacillus johnsonii DPC 6026]
          Length = 376

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/382 (21%), Positives = 142/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N  + M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNLENEMEHLEPGQKMLAVVKANGYGHGAVEVARVADKVGAAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    N+   + ++  L    K      + 
Sbjct: 66  AILDEALELRRADITKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKEAEKYLKDANLQ 125

Query: 122 HPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEDADFIAANEFLENNDNFFIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM------ 232
           +F  + S        +   +++  +        L R GI +YG     N S P       
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHDGIKSDLVRFGIGIYGLNPSSNPSSPDLKSNIK 245

Query: 233 -QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHQGDGVGYGSTFVADEDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I          +   A
Sbjct: 301 -------KIKVGDTYCPIVGRICMDQFMVKMPKKMPV--GTKVTIISSNPNDQNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|227888877|ref|ZP_04006682.1| alanine racemase [Lactobacillus johnsonii ATCC 33200]
 gi|227850570|gb|EEJ60656.1| alanine racemase [Lactobacillus johnsonii ATCC 33200]
          Length = 376

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 79/382 (20%), Positives = 144/382 (37%), Gaps = 30/382 (7%)

Query: 4   NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    +K++L A+K N  + M  L    +  AVVK N YG G  ++A      G   F V
Sbjct: 6   HRPAVVKVNLGAIKRNLENEMEHLEPGQKMLAVVKANGYGHGAVEVARVADKVGTAGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVS 121
             ++E ++LR       I VL  + P    I    N+   + ++  L    K      + 
Sbjct: 66  AILDEALELRRADITKPILVLGVVSPEYAPIAAVNNVSLTVPNLEWLKEAEKYLKDANLQ 125

Query: 122 HPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L +D+G  R+G +   + +       N     +  + +H A AD         Q E
Sbjct: 126 LKIHLGIDSGMGRIGFNEYADFIAANEFLENNDNFFIEGMFAHFASADSSDETYFKHQCE 185

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYG-------GTDKINKSHP 231
           +F  + S        +   +++  +        L R GI +YG        +  +  + P
Sbjct: 186 KFNHMKSLLTVKPKWIHVDNTAASIFHNGIKSDLVRFGIGIYGLNPSSNPNSPDLKSNIP 245

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  ++ E+ +  ++    G+ V YG       D++I    +GYADG+     G      
Sbjct: 246 LEPALSFESELTHVKTIHQGDGVGYGSTFVADEDTIIGTVPVGYADGFIRKFQGF----- 300

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVA 347
                  K  +     PI+G+I MD  M  +   + +  G  + I          +   A
Sbjct: 301 -------KVKVGDTYCPIVGRICMDQFMVKMPKKMPV--GTKVTIISSNPNDQNNIKAAA 351

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T +Y++   +  R  + Y
Sbjct: 352 DYVDTIHYEVACLLNDRLPRVY 373


>gi|84684702|ref|ZP_01012602.1| alanine racemase [Maritimibacter alkaliphilus HTCC2654]
 gi|84667037|gb|EAQ13507.1| alanine racemase [Rhodobacterales bacterium HTCC2654]
          Length = 349

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 189/365 (51%), Gaps = 26/365 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           RL+IDL A+  NW +++A + ++ +T AVVK + YGLG +++A  L  AG + FFV + E
Sbjct: 5   RLQIDLDAIAANWRALDAKTASSVQTGAVVKADGYGLGVDRVAKTLAAAGARRFFVAAAE 64

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E   +R    P   IF+L G   G   +I D NLIP++SSV Q    ++ +       + 
Sbjct: 65  EAADVRTALGPGPAIFLLNGHMAGDADMIRDLNLIPLLSSVEQ---LTRHVETLPGQSFG 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D G NRLG+   E       +        +LI+SHLACAD+P   +N++QL  F  +
Sbjct: 122 IQLDAGMNRLGMEPAEWAAVRDIALTA---GPTLIMSHLACADEPEHEMNAMQLRMFTEM 178

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ GILLGP+YHF LTRPGI LYG       +     VV  +  +I  
Sbjct: 179 TEG-CDVPRSLAATGGILLGPDYHFDLTRPGIGLYGARPFEEAT----PVVHLDLPVIQT 233

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R+   GE V YG        + +A  + GYADG    LS        +            
Sbjct: 234 REIGRGETVGYGNSWTADAPTRVATVSGGYADGITRHLSNKGVLFDSA-----------T 282

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             PILG+++MD    DI    ++    ++ + GP   +DD+A  +GT  Y++L ++G RY
Sbjct: 283 PCPILGRVSMDSIGIDIGHLDTVPE--WLTLIGPHQSVDDIADTTGTIGYEILTQLGHRY 340

Query: 366 AKFYT 370
            + YT
Sbjct: 341 TRDYT 345


>gi|156741877|ref|YP_001432006.1| alanine racemase [Roseiflexus castenholzii DSM 13941]
 gi|156233205|gb|ABU57988.1| alanine racemase [Roseiflexus castenholzii DSM 13941]
          Length = 849

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 24/374 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               +++DL A+++N  ++ A++G     AV+K +AYG G  + A A    G     V +
Sbjct: 485 RPTWVRVDLDAIRDNVRALRAIAG-VPLMAVLKADAYGHGAVRAARAALAGGAMALAVAT 543

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E   LR     A I  L    P Q        ++  +         +   + G++   
Sbjct: 544 LGEARTLREAGIGAPILALGYTPPWQVAQAARLGIVLTVFDPDTARACAAAAAIGLNVTM 603

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VDTG  R G+S++E   F     +    ++  + +H A AD         QL RF  
Sbjct: 604 HVEVDTGMARTGVSVEELGPFLRLLTDLPGVRVEGLYTHFADADAADLSAAEAQLRRFCA 663

Query: 185 LISHYK--GIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVT 237
            +      G+   +  ++     L  P   F + RPGI+ YG     +   P   +  ++
Sbjct: 664 TLDAITSAGLRPPIVHAANSAALLRLPGARFDMVRPGIACYGLAPSPHTPLPPTLRPALS 723

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A +  +R    G  VSYGG     R S IA   +GYADG     +             
Sbjct: 724 FHAEVAQVRDLPPGAPVSYGGTFVTRRASRIATIPVGYADGLRRAPAWR----------- 772

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  ++    PI+G+I MD  M D+TD   +  GD + + G      +  D++A   GT 
Sbjct: 773 -EVLVRRRRAPIVGRICMDYAMIDVTDIPGVRRGDQVTLIGSQGDERLTADEIAGWLGTI 831

Query: 354 NYDLLVRIGTRYAK 367
           +YD++  I  R  +
Sbjct: 832 SYDVVATILPRVPR 845


>gi|297243200|ref|ZP_06927137.1| alanine racemase [Gardnerella vaginalis AMD]
 gi|296888849|gb|EFH27584.1| alanine racemase [Gardnerella vaginalis AMD]
          Length = 459

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 97/406 (23%), Positives = 166/406 (40%), Gaps = 44/406 (10%)

Query: 8   RLKIDLTALKNNWHSMNALSGN--------ARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++ +DL AL++N  ++                   VVK + YG G    A A    G   
Sbjct: 33  QVIVDLKALRDNMRTLVERVSQDLQPSQNAPEVMGVVKADGYGHGLVPSALAALAGGATW 92

Query: 60  FFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
                  E ++LR      +R  +L  +         D     +  SV  +     +   
Sbjct: 93  LGTAQPYEALRLRAAGIDSSRCHILTWLTSAPTTRFADLITADIDISVGSVDSLDAVAFA 152

Query: 119 ----GVSHPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPS 171
               G      ++VDTGF R G + +    AL+      ++ + ++    SHLA AD P 
Sbjct: 153 ARKLGKPARVHVKVDTGFGRNGFTPEGFSAALEKLQQYSSEGVIEVIGQWSHLAVADSPD 212

Query: 172 SH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
                     Q+++F    +  K          LA+++  L  P   F+L RPGI LYG 
Sbjct: 213 VPEFVDATDRQIQQFHEFTNRMKEASVAPKIRHLANTAATLNRPEIRFELVRPGIGLYGY 272

Query: 223 TDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                    +++ +Q  +T +A++  ++    G  +SYG       ++  A+  +GYADG
Sbjct: 273 EPDPAMGDSQTYGLQPAMTLQAQLGTVKAVEEGHGISYGRTYLTPNNTSTAIVPLGYADG 332

Query: 279 YPLTLSGLDSEHSPSV-FLGGKGFIK-GYMVPIL---GKITMDMTMFDI-TDSLS--IEV 330
              + SG D + +  V   GG   ++      IL   G++ MD  + D+  D+    +  
Sbjct: 333 ILRSASGFDMQGARHVDKQGGPVRVETNKGARILNVSGRVCMDQFIVDLKGDAAELGVRE 392

Query: 331 GDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           GD + +FGP       +   DD A A+GT +Y+++  IG R  + Y
Sbjct: 393 GDTVTLFGPGRGVEFAEPTADDWAEAAGTISYEIMTGIGPRVPRLY 438


>gi|309810948|ref|ZP_07704748.1| alanine racemase [Dermacoccus sp. Ellin185]
 gi|308435102|gb|EFP58934.1| alanine racemase [Dermacoccus sp. Ellin185]
          Length = 400

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 90/394 (22%), Positives = 156/394 (39%), Gaps = 41/394 (10%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N   R+ +DL A+ +N + M   +  A    VVK +AYG G    A A  + G     V 
Sbjct: 12  NAPARVVVDLDAIADNANEMTRRAEGASVLGVVKGDAYGHGLVPSARAAVSGGSTWLGVA 71

Query: 64  SVEEGVKLRLYTPQA------RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLM 116
            + E + LR    +        +               +  +   + SV +L    +   
Sbjct: 72  QLAEAMTLRRAAAEGAGDLDVPVLSWLHAPGSPFAEAIEARIDLGVPSVGELDGIAAAAR 131

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSH 173
             G      L+VDTG  R G    +       +   +      +   ++H   AD+P   
Sbjct: 132 RVGRRARVHLKVDTGLARNGAYGDDWPRLVEAAKAAQATGDVEVVGLMTHFVRADEPGHP 191

Query: 174 VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
            N+ Q+ERF +  +  +          +++S      P   F L RPG++LYG +   + 
Sbjct: 192 ENTAQIERFTSAATDCESAGFELEVRHMSNSPATFFLPEARFDLVRPGLALYGLSPAPDL 251

Query: 228 ---KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
              +   ++  ++  A + + ++  AG+ VSYG      R + +A   +GYADG P   S
Sbjct: 252 ATSEELTLRPAMSITANVTVTKRVPAGQGVSYGHTYTTPRGTTLADIPVGYADGVPRAAS 311

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT--DSLSIEVGDYIQIFG---- 338
            +           G   + G    I G++ MD     +T     ++  GD + +FG    
Sbjct: 312 NV-----------GPLLVAGARTTIAGRVCMDQI---VTDAGDAAVAAGDEVVLFGRASD 357

Query: 339 --PDIKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
                   D A A+GT +Y+++ R+ TR  + YT
Sbjct: 358 GTQGPSAQDWADAAGTISYEIVTRMSTRLPRVYT 391


>gi|239813248|ref|YP_002942158.1| alanine racemase [Variovorax paradoxus S110]
 gi|259710076|sp|C5CX88|ALR_VARPS RecName: Full=Alanine racemase
 gi|239799825|gb|ACS16892.1| alanine racemase [Variovorax paradoxus S110]
          Length = 366

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/373 (22%), Positives = 148/373 (39%), Gaps = 27/373 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +   AL++N       + +AR  AVVK NAYG G E++   L   G   F +  
Sbjct: 3   RPILATVHTAALRHNLDRARRAAVDARVWAVVKANAYGHGIERVYEGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  + +L G+      ++    +L   +    Q+   +   +      
Sbjct: 61  LAEAERVRALGWRGPVLLLEGVFDARDLELCSRLDLWHTVHCDEQIDMLAAHKTL-KPQR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + +                   +++H + AD       + QLE F 
Sbjct: 120 VFLKMNSGMNRLGFAPERFGSAWTRLNALPQVDEISLMTHFSDADGARGI--AHQLEVFE 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV----VTAE 239
                  G  +   S++ +           RPGI LYG      +           +T  
Sbjct: 178 RATHDLLGERSIANSAATLRHARQTRGDWVRPGIVLYGSAPDFPEHDAAHWQLQPTMTLS 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            ++I I+   AG+ + YG          I VAA+GYADGYP   +            G  
Sbjct: 238 TKLIGIQTLKAGDTIGYGSNFTAEGPLTIGVAAVGYADGYPRHCN-----------TGTP 286

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDVALASGTT 353
             + G    ++G+++MDM   D+T     + G  + ++G        + +D+VA A+GT 
Sbjct: 287 VLVNGVRTRMVGRVSMDMITVDLTPVPEAKFGTEVTLWGRSAVSGAVLPIDEVAQAAGTV 346

Query: 354 NYDLLVRIGTRYA 366
            Y+L+  +  R  
Sbjct: 347 GYELMCAVAPRVP 359


>gi|313817562|gb|EFS55276.1| alanine racemase [Propionibacterium acnes HL046PA2]
          Length = 375

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 148/372 (39%), Gaps = 24/372 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
             IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V  V E
Sbjct: 10  AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVAPVAE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           G +L        I       P        + +   +     L   SK     G++    +
Sbjct: 70  GQELVEAGIPLPILNPPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGITAKIHI 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTL 185
            VD+G  R+GL  +   + T  +   K  ++  + +HL  +D P        +++ F T 
Sbjct: 130 AVDSGMGRIGLRPECLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTA 189

Query: 186 IS----HYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAE 239
           +S    H         ++SG +LG +     + R GI  YG     +     +   ++  
Sbjct: 190 VSLIETHRGPFPLVHLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWI 249

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +  ++    G+ + YG     +  + IA   +GYADG    LS             G 
Sbjct: 250 SHVTFVKTVSVGDTIGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNY 355
             I+G + PI+G+I MD  M D+    ++ VGD + + G      +  DD+A   GT +Y
Sbjct: 299 VLIRGSVHPIVGRICMDQFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISY 358

Query: 356 DLLVRIGTRYAK 367
           ++   I  R  +
Sbjct: 359 EITCAISKRVDR 370


>gi|217032731|ref|ZP_03438215.1| hypothetical protein HPB128_158g10 [Helicobacter pylori B128]
 gi|298736103|ref|YP_003728628.1| alanine racemase [Helicobacter pylori B8]
 gi|216945547|gb|EEC24202.1| hypothetical protein HPB128_158g10 [Helicobacter pylori B128]
 gi|298355292|emb|CBI66164.1| alanine racemase [Helicobacter pylori B8]
          Length = 377

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNANASMLIDNDLSAMVFSLEQAEVFSQMALKAKKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLARALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVVINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSAKANDASEIAT 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIAYETISTLSKRLERVY 376


>gi|56415949|ref|YP_153024.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197364876|ref|YP_002144513.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|56130206|gb|AAV79712.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197096353|emb|CAR61958.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 368

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 106/360 (29%), Positives = 171/360 (47%), Gaps = 15/360 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGEEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P    +     + P+++SV Q + + +   +     P  +Q+
Sbjct: 76  LRKILSADAMVVLLNGVMPQAMPLCCAQQITPLLNSVDQVMAWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKKA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 196 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLTILRVQDV 254

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G  + YG     TR   IA  + GYADG P  L                   +G  +P
Sbjct: 255 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPLAGVCWRGVRLP 303

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 304 VLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAACDTIPYEIIARLGARFRRI 362


>gi|330718524|ref|ZP_08313124.1| alanine racemase [Leuconostoc fallax KCTC 3537]
          Length = 375

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 162/378 (42%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L++DL A++NN  ++   +G  +  AVVK NAYG G   +  +LY  G++DF V +
Sbjct: 12  RPTWLQVDLAAIQNNAKAIMKHAGAQKMIAVVKANAYGHGAVAVTNSLYAIGIRDFAVAT 71

Query: 65  VEEGVKLRLYT--PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++EG++LR         I +L      Q  +I   +L P I  +  L   ++LM+     
Sbjct: 72  IDEGIELRQNITQQDINILLLGVQDVAQVPVILQYHLTPAIGDIQWLMKATQLMAMDDVL 131

Query: 123 PYALQVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L VDTG  R    +  +               LS + +H A ADD +      Q+++
Sbjct: 132 NVHLAVDTGMGRMGARNEHDVQMVKDFIDQSSHFALSGVFTHFATADDHNDAYYQQQVQK 191

Query: 182 FRTLISHYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGT---DKINKSHPMQTV 235
           F+   +H +  E       + S +      +    R G +LYG       +     +Q  
Sbjct: 192 FQLWTTHAQIPEELCHLANTGSALWHHNEINTHTIRVGSALYGFNPGTPHLEMPLQLQPA 251

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  + +I    +   GE +SYG      +  L+A   IGYADGY   L G+         
Sbjct: 252 MALKTKIGATHQMAVGESISYGATYTAQQPQLVATLPIGYADGYLRRLQGM--------- 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              K  + G+   ++G+ITMD  +  +     +  G  + + G      I ++D+A  + 
Sbjct: 303 ---KVLVDGHFEKVVGRITMDQILITLKQPYPV--GTIVTLMGYDGEQQISVEDIANYAK 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++L  + +R  + Y
Sbjct: 358 TIPHEVLTILTSRLPRIY 375


>gi|237786300|ref|YP_002907005.1| Alanine racemase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759212|gb|ACR18462.1| Alanine racemase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 615

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 95/418 (22%), Positives = 148/418 (35%), Gaps = 65/418 (15%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG------NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            L + ID  AL +N  ++   +        A   AVVK N Y  G  + A      G   
Sbjct: 30  LLTMTIDRDALAHNAQAVARNAQLANPDHPAELMAVVKANGYNHGAVEAARVFLANGATQ 89

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-----------LIPVISSVPQ 108
             V ++ E V+LR     A I            +    +            I  I     
Sbjct: 90  LGVATITEAVELRQAGISAPILAWIWNADDHVSVKAALDYGIDLGVPTLAHIRAIVDEAT 149

Query: 109 LTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLA 165
               S+     V     + VD+G +R G+S  +  D            +  +    +HLA
Sbjct: 150 ERKRSQEDWEFVPPRVTVMVDSGLSRSGISPDQWDDALKELSAASSDSIIDVTGAFTHLA 209

Query: 166 CADDPSSHVNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLY 220
            AD   +  N+ Q  +F   I   +          + +S   +  P+  +Q+ RPG++LY
Sbjct: 210 SADAADNPSNNRQKAQFDAAIEELQAAGIPVRINHMCNSPASVTRPDMFYQMVRPGVALY 269

Query: 221 GGTDKINKSHPM-----------QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
           G       +              +  +T  A I+  R   AGE VSYGG      D++  
Sbjct: 270 GMDPLEEPADRSASTGSSLVSQLKPAMTLSAPIVAKRLVKAGESVSYGGTWTADVDTVTG 329

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD----- 324
           V   GYADG P  LSG             +  I G   P +G++ MD  +  +       
Sbjct: 330 VVPAGYADGIPRALSGRM-----------EVAINGRRYPQIGRVCMDQIVVALGPAGSKQ 378

Query: 325 SLSIEVGDYIQIFGPD-------------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + ++  GD   IFGP                  ++A   GT +Y++L    TR  + Y
Sbjct: 379 ASAVHQGDEAVIFGPPGECIGSDGKPASLPTATELAETLGTIHYEILTSPHTRVHRRY 436


>gi|302382920|ref|YP_003818743.1| alanine racemase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193548|gb|ADL01120.1| alanine racemase [Brevundimonas subvibrioides ATCC 15264]
          Length = 345

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 123/364 (33%), Positives = 183/364 (50%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L +DL AL +N H++ A+SG A    VVK ++YGLG   +A  L   G + FFV  + 
Sbjct: 5   ATLTVDLDALAHNVHALAAISG-APVHPVVKADSYGLGAIPVAQRLLREGSRTFFVARLA 63

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG+ LR    P+  ++VL G        +   +L P+++   QL  +             
Sbjct: 64  EGIALRSALGPEPTLYVLDGCVGDAAPALKAADLRPILNHGDQLMAWR----AADGGACG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQ+DTG NRLG  +++A              LSL++SHLACAD+P+  +N  Q + F   
Sbjct: 120 LQIDTGMNRLGFRIEDAP--------APFEGLSLVMSHLACADEPAQPMNRRQRDAFAAA 171

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + Y G   S A+S G  LGP+Y F   RPGI LYGG  +      ++ V T  AR++ +
Sbjct: 172 AARYPGALRSFANSGGCFLGPDYAFDAVRPGICLYGGGPEGRPHDRIKPVATLSARVLQV 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R   AGE + Y           IA    GYADG   +               G+ ++ G 
Sbjct: 232 RDVPAGESIGYSRGFVAPEARRIATCGAGYADGVLRS-----------QCPNGQVWVAGS 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           + PILG+++MD+   D+T    + VGD +++FGP+  LDD A A+GT +Y+LL  +  R 
Sbjct: 281 LRPILGRVSMDVIAVDVTGL-DVAVGDPVELFGPNHLLDDAAAAAGTISYELLTSVTARV 339

Query: 366 AKFY 369
            + Y
Sbjct: 340 PRRY 343


>gi|289550307|ref|YP_003471211.1| Alanine racemase [Staphylococcus lugdunensis HKU09-01]
 gi|289179839|gb|ADC87084.1| Alanine racemase [Staphylococcus lugdunensis HKU09-01]
          Length = 382

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 95/382 (24%), Positives = 152/382 (39%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S+++ R   + +DL A+ NN+     L  N     V+K N YGLG  +IA  L + G   
Sbjct: 2   SDKYYRNTYINVDLAAINNNYRQFTQLHDNKTVIPVIKANGYGLGSVRIAQYLVDHGASF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN--LIPVISSVPQLTFYSKLMS 117
           F V +++E ++LR++  +A+I +L  I              +     S       +    
Sbjct: 62  FAVATLDEAIELRMHGIKAQILILGVIPIEDINKAIQHRVAITVPSKSWLSSAIKAINDD 121

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                   +++DTG  RLG+  Q E     H     +      + +H ACAD+P      
Sbjct: 122 NEKRLWLHIKLDTGMGRLGIKNQAEYHQTIHLIEQHEHLVFEGVYTHFACADEPGDSA-Q 180

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDK----INKSHP 231
            Q + F+T ++         A +S   L  +       R GISLYG              
Sbjct: 181 QQYQCFKTWVTSTDMPRYVHAQNSAGALMIDADICNAVRLGISLYGYYPSEYVKEEADIE 240

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q       +I+  ++   GE VSYG          I +  IGYADGY   + G      
Sbjct: 241 LQPSAELMTQIVQTKELQPGESVSYGSTYTAQSPIKIGIIPIGYADGYLRIMQGH----- 295

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     +KG    ++G++ MD T+  I D   I  GD + +          +D +A
Sbjct: 296 -------FVNVKGQQCEVIGRVCMDQTIIKIND--DILEGDEVCVISKQQDSIQSVDAIA 346

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +G R  + Y
Sbjct: 347 KQQKTINYEVLCNLGRRLPRIY 368


>gi|257094224|ref|YP_003167865.1| alanine racemase [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
 gi|257046748|gb|ACV35936.1| alanine racemase [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
          Length = 367

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 107/373 (28%), Positives = 170/373 (45%), Gaps = 23/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS----GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             +  +ID  AL++N+      +    G AR  AVVK NAYG G  + A AL +     F
Sbjct: 3   RPIAARIDGGALRHNYLLARNQARRGEGRARAWAVVKANAYGHGLLRAARALADV-ADGF 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            +  +EE V+LR    +  I +L G     +  +   + + ++    +     +  S  V
Sbjct: 62  ALLDLEEAVRLRDAGIRQPILLLEGFFEAADLAVCAAHDLTLVVHRLEQLQMLRRASLPV 121

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQL 179
             P  L++++G NRLGL+  E                  +++H A AD D      + QL
Sbjct: 122 RLPIFLKLNSGMNRLGLTAAELPAVRRELAASPAVSAVTLMTHFAEADGDGGEACITWQL 181

Query: 180 ERFRTLISHYKG---IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQ 233
           ERF  +++ +        SLA+S+ IL  P       RPGI LYGG+   ++      ++
Sbjct: 182 ERFAGMLADWPEAATWPVSLANSAAILRYPQTARDWVRPGIMLYGGSPFADQDAASLGLK 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T  +RI+ +++   GE V YGG     R + + V A GYADGYP    G        
Sbjct: 242 PVMTLHSRILAVQEIAVGERVGYGGTFVARRPTRVGVVACGYADGYPRHAPG-------- 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
              G    + G     LG+++MDM   D+TD  +  V   + ++G  +  D VA A+GT 
Sbjct: 294 ---GTPIVVAGQATTTLGRVSMDMLACDLTDLPAAGVNSPVVLWGEGLAADAVAAAAGTI 350

Query: 354 NYDLLVRIGTRYA 366
           +Y+L   +  R  
Sbjct: 351 SYELFCALARRVP 363


>gi|315660233|ref|ZP_07913088.1| alanine racemase [Staphylococcus lugdunensis M23590]
 gi|315494660|gb|EFU83000.1| alanine racemase [Staphylococcus lugdunensis M23590]
          Length = 399

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/382 (25%), Positives = 153/382 (40%), Gaps = 30/382 (7%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S+++ R   + +DL A+ NN+     L  N     V+K N YGLG  +IA  L + G   
Sbjct: 19  SDKYYRNTYINVDLAAINNNYRQFTQLHDNKTVIPVIKANGYGLGSVQIAQYLVDHGASF 78

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN--LIPVISSVPQLTFYSKLMS 117
           F V +++E ++LR++  +A+I +L  I              +     S       +    
Sbjct: 79  FAVATLDEAIELRMHGIKAQILILGVIPIEDINKAIQHRVAITVPSKSWLSSAIKAINDD 138

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                   +++DTG  RLG+  Q E     H     +      + +H ACAD+P      
Sbjct: 139 NEKRLWLHIKLDTGMGRLGIKNQAEYHQTIHLIEQHEHLVFEGVYTHFACADEPGDSA-Q 197

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDK----INKSHP 231
            Q + F+T ++         A +S   L  +       R GISLYG              
Sbjct: 198 QQYQCFKTWVTSTDMPRYVHAQNSAGALMIDADICNAVRLGISLYGYYPSEYVKEETDIE 257

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q  V    +I+  ++   GE VSYG          I +  IGYADGY   + G      
Sbjct: 258 LQPSVELMTQIVQTKELQPGESVSYGSTYTAQSPIKIGIIPIGYADGYLRIMQGH----- 312

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                     +KG    ++G++ MD T+  I D   I  GD + +          +D +A
Sbjct: 313 -------FVNVKGQQCEVIGRVCMDQTIIKIND--DIVEGDEVCVISKQQDSIQSVDAIA 363

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
               T NY++L  +G R  + Y
Sbjct: 364 KQQKTINYEVLCNLGRRLPRIY 385


>gi|111023143|ref|YP_706115.1| alanine racemase [Rhodococcus jostii RHA1]
 gi|110822673|gb|ABG97957.1| alanine racemase [Rhodococcus jostii RHA1]
          Length = 400

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/376 (25%), Positives = 156/376 (41%), Gaps = 26/376 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             +DL A+ +N   +   + +A   AVVK + Y  G   +A A   AG  +  VT+V E 
Sbjct: 30  AVVDLDAIAHNVRILRDSARDAAMMAVVKADGYNHGAVPVARAALAAGASELGVTTVSEA 89

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPYALQ 127
           + LR     A +                  +   +SS        +   S G +    ++
Sbjct: 90  LTLRRAGIDAPVLAWLHTVDADFAPAIAAGVELGVSSPRHLAAVVAAARSVGTTAIVTIK 149

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRT 184
           VDTG NR G++  E      +    +         I SHLA AD+P       Q +R  +
Sbjct: 150 VDTGLNRNGVAPDELAQVLVDLARAQAEGSVRLRGIFSHLAHADEPHHAWIDSQRDRLIS 209

Query: 185 LISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTA 238
            I+  K          L++S+  L  P+  F + RPGI++YG +         ++  +T 
Sbjct: 210 AIADAKRQGLVPEVVHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPELGQFGLRPAMTL 269

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +R+ L++K  AGE VSYG Q    RD+ +A+   GYADG P +LSG             
Sbjct: 270 RSRVALVKKVAAGEGVSYGHQWVAPRDTTVALLPFGYADGLPRSLSGRF----------- 318

Query: 299 KGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
           +  +     P +G++ MD  + D+  D   +  GD    FG     +      A    T 
Sbjct: 319 EVQLGAQRRPGIGRVCMDQVVVDLGPDGGGVREGDTAVFFGNGDLGEPNAQAWADELDTI 378

Query: 354 NYDLLVRIGTRYAKFY 369
           +Y+++  +  R  + Y
Sbjct: 379 HYEVVTGVRGRTVRSY 394


>gi|134094965|ref|YP_001100040.1| alanine racemase 2, PLP-binding, catabolic [Herminiimonas
           arsenicoxydans]
 gi|133738868|emb|CAL61915.1| alanine racemase, catabolic [Herminiimonas arsenicoxydans]
          Length = 348

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 93/356 (26%), Positives = 151/356 (42%), Gaps = 19/356 (5%)

Query: 17  KNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTP 76
           ++N       + ++R  AVVK NAYG G E+              +  V+   +LR    
Sbjct: 2   RHNLRVAKNCAPHSRILAVVKANAYGHGLERGMRGFAE--ADGLGLIEVDNAARLRQLGW 59

Query: 77  QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLG 136
           Q RI +L G     +      + I  +    +     +  S        L++++G NRLG
Sbjct: 60  QKRILLLEGFFDADDLQTIAVHQIDTVVHCVEQLQMLEQASLNAKLDVHLKINSGMNRLG 119

Query: 137 LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN--SVQLERFRTLISHYKGIEA 194
                  D           +    I+H A A++ ++     S QL+RF+T      G + 
Sbjct: 120 FMPAVCRDIYQRLRAIPAVRNISFITHFANAENAANANLPLSEQLQRFQTATQGLPG-DR 178

Query: 195 SLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPMQTVVTAEARIILIRKALAGE 252
            L++S+  L+ P       RPG+ LYGGT       +  +Q  +T  + II I+   AG+
Sbjct: 179 CLSNSAADLMHPECAADWVRPGVMLYGGTPADTSAAAFGLQPAMTLSSEIIGIQHIAAGD 238

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            V YG     +    I V A GYADGYP                G    + G    ++G+
Sbjct: 239 AVGYGSSFVASGPMTIGVVACGYADGYPRHA-----------PSGTPVIVDGVRTQMVGR 287

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           ++MDM   D+T   +  VG  + ++G  + +D+VA A+GT  Y+L+  I  R  + 
Sbjct: 288 VSMDMITVDLTPVATAGVGSPVILWGQGLPIDEVANAAGTVGYELMCAIAPRV-RI 342


>gi|326774015|ref|ZP_08233297.1| alanine racemase [Actinomyces viscosus C505]
 gi|326636154|gb|EGE37058.1| alanine racemase [Actinomyces viscosus C505]
          Length = 447

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 161/415 (38%), Gaps = 65/415 (15%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  +DL A+ +N   +  ++G     AVVK +AYG G   +A    +AG     V  + E
Sbjct: 33  RAVVDLAAVAHNGRRLAQVAG-VPWMAVVKADAYGHGLGPVALTALSAGASWLGVAQLAE 91

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI-----------------------S 104
            + LR    +A +    G    Q   +    L  +                        S
Sbjct: 92  ALTLRALLDEAGVSRPVGEPTSQAPRLLTWLLPVMEPDRAAAEDSPLRAALAADLDLSVS 151

Query: 105 SVPQLTFYSKLMSCGVSHPY-ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--- 160
           ++PQL   S             L+VDTG +R G +++E           +      +   
Sbjct: 152 TLPQLEALSAAARAQGRAARLHLKVDTGMSRGGATVEELPALAAALRRAEDEGTVDVVGL 211

Query: 161 ISHLACADDPSSHVNSVQLERFRTL-----ISHYKGIEASLASSSGILLGPNYHFQLTRP 215
            SHL+ AD+P+S      LER+R        +        LA++ G+L  P     L R 
Sbjct: 212 WSHLSRADEPASGSTEEHLERYRQAEQVVLAAGLNPPTHHLAATGGLLWHPQARMDLVRA 271

Query: 216 GISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
           GI +YG +            ++  +  E+ ++ +++  AG+ VSYGG      D  + + 
Sbjct: 272 GIGMYGLSPDPSVATGAELGLRPAMRLESPLVQVKRIEAGQAVSYGGTWSAPTDRWVGLV 331

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS---- 327
            +GY+DG P   S             G   +   M  ++G++ MD  + D+  ++     
Sbjct: 332 PLGYSDGIPRAAS-----------SAGPVGVGSLMTSVVGRVCMDQVVIDLGPAVDETGA 380

Query: 328 -----IEVGDYIQIFGPD--------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                  VGD   ++G             D+ A A GT NY+++ R+G R  + Y
Sbjct: 381 PLPAAARVGDTAVLWGAPAVSDQEAVPTADEWAQACGTINYEIVTRLGARVPRCY 435


>gi|119963624|ref|YP_947004.1| alanine racemase [Arthrobacter aurescens TC1]
 gi|119950483|gb|ABM09394.1| alanine racemase [Arthrobacter aurescens TC1]
          Length = 390

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 92/378 (24%), Positives = 156/378 (41%), Gaps = 31/378 (8%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL+A+ +N  ++   +      AVVK NAYG G  ++A     AG        + E + L
Sbjct: 2   DLSAISDNIQALKKRTEAPFFMAVVKGNAYGHGLVEVARTAVKAGADWLGTAQLSEAIAL 61

Query: 72  RLYTPQARIFVLYG---IHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQ 127
           R       I              +   + ++   + SV QL   + +    G      L+
Sbjct: 62  RQAGITVPILSWLYLASQTSATIREALENDIDVSLGSVGQLEVLAGIAKRLGRPAVVHLE 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNSVQLERFRT 184
           +D+G +R G   ++  +    +   +L        I +HLA AD P+   N   +  F  
Sbjct: 122 LDSGLSRGGARKEDWAELVAQARQAELAGNLRVRGIWTHLAWADVPAHPGNITAVAEFED 181

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVV 236
            +              ++SS+ IL  P +HF + R G+++YG     +       ++  +
Sbjct: 182 AVREAHQAGLAPELRHVSSSANILDRPEFHFDMVRAGLAIYGLAPADHLDPADFGLRPAL 241

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  A +++++K  AG  VSY  Q        + +  +GYADG P  +SG           
Sbjct: 242 SVTAPLVMLKKVPAGTGVSYEHQAITYEPRYLGLIPLGYADGIPKGISGRSV-------- 293

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASG 351
                I G  VP++GK+ MD  M D+  D+  I+VGD   +FG         DD   A G
Sbjct: 294 ---VNIGGRTVPVIGKVCMDQFMVDLGPDASGIDVGDTAVLFGDPACGAASADDWGAAIG 350

Query: 352 TTNYDLLVRIGTRYAKFY 369
           +   +++ RI  R  + Y
Sbjct: 351 SHGDEIINRIAPRLPRAY 368


>gi|42524510|ref|NP_969890.1| hypothetical protein Bd3124 [Bdellovibrio bacteriovorus HD100]
 gi|39576719|emb|CAE80883.1| alr [Bdellovibrio bacteriovorus HD100]
          Length = 402

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 45/401 (11%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M        +I+L  LK+N   +      A     +VK NAYG G  ++A  L + G++ 
Sbjct: 1   MEMYRRTFAEINLDHLKHNIQVLQKAFPQAPFLCPMVKANAYGHGDVQLARFLESLGIKH 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V  +EEG+ LR     A I V  G      + I + N+ PV+SS  Q+          
Sbjct: 61  LGVCLIEEGLLLRRSGVNAEILVFRGFDREGAEKIIEYNMTPVVSSWEQIDHLE--AVAS 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH--VNSV 177
                 L+ DTG NRLG   +EA       +  K  +L  +++HL   +D +    +++ 
Sbjct: 119 DPVGIHLKFDTGMNRLGFRPEEAQKLFDRLWQNKKIRLKALVTHLFNGEDATDSQGISAR 178

Query: 178 QLERFRT--LISHYKGIEASLASSSGILL-------------GPNYHFQLT-RPGISLYG 221
           QL        +     I     +S+GI+               P +      RPG+ +YG
Sbjct: 179 QLRDLNRVSTVFKPFNIFCHALNSAGIMSALQMKDAGNTPADHPLFMQNWGLRPGLMIYG 238

Query: 222 GTDKINKSHPM-QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP 280
                  S    + V++ ++ +   R+   GE VSYGG     +DS+IAV  IGYADGY 
Sbjct: 239 YNPLGQNSFGGLKPVMSLKSHVATYRQLHIGETVSYGGTWTAKQDSVIAVVPIGYADGYH 298

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT------DSLSIEVGDYI 334
             LS   S               G  VP++G I MD  M D+T      D    +    +
Sbjct: 299 RILSNQSS-----------VVFAGKRVPLVGSICMDYLMLDVTEVVRGKDLKDFK-DQEV 346

Query: 335 QIFGPD-----IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
            +FG       +  +++A+ + +  +++L  +G R  + Y+
Sbjct: 347 TLFGFASDGSFLSPEELAVQAKSITWEMLTSVGERVPRIYS 387


>gi|167646468|ref|YP_001684131.1| alanine racemase [Caulobacter sp. K31]
 gi|167348898|gb|ABZ71633.1| alanine racemase [Caulobacter sp. K31]
          Length = 360

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 136/363 (37%), Positives = 191/363 (52%), Gaps = 14/363 (3%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           RL +DL AL +N   + A +G A  A  VK + YGLG   +A  L++ G + F+V  + E
Sbjct: 6   RLTLDLDALASNHAVLRAAAGGAEIAPAVKADGYGLGAALVAGRLWDEGARSFYVARLSE 65

Query: 68  GVKLRLYTPQ--ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           G+ LR       A I++L G+ PG    I   +L PV++S+PQ+  ++     G +   A
Sbjct: 66  GLALRRALGDRAAAIYLLDGVTPGSAPAIEGASLTPVLNSLPQVEAWNSHAR-GRALDAA 124

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L +DTG NRLGL  +EA          K   ++L+ISHLACA +P   +N+ QL RF   
Sbjct: 125 LHIDTGMNRLGLRPEEAAVLVAAMDRLKHVNITLVISHLACASEPDHPLNARQLARFTEA 184

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
            + +     SLA+S GI LG  YHF   RPGISLYGG  +      +Q VVT EA ++  
Sbjct: 185 AALFPNARRSLANSGGIFLGDPYHFDQCRPGISLYGGGPRDIPDTRIQAVVTLEAPVLQT 244

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE + YG        + +A+ A GYADG P                 G  +  G 
Sbjct: 245 RVVPRGESIGYGAAFTAQETTRVAILAAGYADGVPRAA-----------HPRGAVWFDGA 293

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
             P+LG+++MD+   DITD  +   G  +QI GPD+ +DD A A+GTT Y+LL RI  R 
Sbjct: 294 RRPMLGRVSMDLIAVDITDCDAARPGAMMQILGPDVLVDDAAAAAGTTAYELLTRIAPRA 353

Query: 366 AKF 368
            + 
Sbjct: 354 RRV 356


>gi|320528033|ref|ZP_08029199.1| alanine racemase [Solobacterium moorei F0204]
 gi|320131659|gb|EFW24223.1| alanine racemase [Solobacterium moorei F0204]
          Length = 372

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 80/367 (21%), Positives = 152/367 (41%), Gaps = 23/367 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++++L  ++ N   +  +    +  AV+K +AYG G   +A A+  AG +   V+S
Sbjct: 3   RKTWMQVNLDKIERNLIQLKEIC-QKKIIAVLKADAYGCGDIHVARAVLEAGAEMIAVSS 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR    + ++ +L         I+    +     S   +    K    G     
Sbjct: 62  LDEALVLRNEGYEGKLLILGATEASDIPILIKHGISCTAYSTEWVIKAIKQNCEG--LHV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG +R+G    + L             +  I +H  CAD  S+ + ++Q  +F+ 
Sbjct: 120 HLKVDTGMSRIGFRTIDELHLAFEKLQAANCDMEGIFTHFCCADSNSN-LTNLQFSKFKE 178

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
            +  +      +   +S              R GISLYG +       P    ++  + +
Sbjct: 179 AVESFSYTFPWVHCDNSDATAFFQEDTSNACRIGISLYGISTYEKSLEP---AISLYSEV 235

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           ++++   AG+ V YG       D +IA   IGYADG+     G             K ++
Sbjct: 236 VMVKHMHAGDTVGYGATYTAKDDEIIATLPIGYADGFVRANQGR------------KVYV 283

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G    I+G++ MD  M  +   + ++    ++IFG  I L+ +A    T  Y+++  + 
Sbjct: 284 DGQYAEIVGRVCMDQVMIHLEQEVPVK--TVVEIFGEHISLEKMAEELNTIPYEIICLLS 341

Query: 363 TRYAKFY 369
           +R  + Y
Sbjct: 342 SRVTRRY 348


>gi|308184724|ref|YP_003928857.1| alanine racemase [Helicobacter pylori SJM180]
 gi|308060644|gb|ADO02540.1| alanine racemase [Helicobacter pylori SJM180]
          Length = 377

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+H++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFHAVKSIVPKDACIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  ++ S+ Q   +S++           +
Sbjct: 68  ALELRSHFSKTPILILGYSPNANASMLVDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHI 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +ARI+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKARIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-EAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|71065518|ref|YP_264245.1| alanine racemase [Psychrobacter arcticus 273-4]
 gi|71038503|gb|AAZ18811.1| alanine racemase [Psychrobacter arcticus 273-4]
          Length = 368

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 95/373 (25%), Positives = 175/373 (46%), Gaps = 25/373 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + I   A+ +N + +   +   +  A+VK NAYG G   + PAL         V ++ E 
Sbjct: 4   ITIKPAAITHNLNQVKKFAPETKVLAMVKANAYGHGVAAVLPALQQ--ANGVGVATLIEA 61

Query: 69  VKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           ++ R       I ++ G     + +   + ++  VI   PQLT+           +    
Sbjct: 62  LEARQLGWDKTIALIEGAFTVDEWRQAIEHDISCVIHHAPQLTWALEHTPPVHCATRVVW 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L+ +TG NRLG +    +           G   ++ +H A ADD +  +N++Q++RF  +
Sbjct: 122 LKYNTGMNRLGFNADGVIVAAQRLHEA--GYQLILTTHFANADDQTHPLNAMQIQRFNDM 179

Query: 186 ISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVT 237
           +S  +      ++ SL +S+GI+  P +H    RPGI LYG T  I++S     +Q  + 
Sbjct: 180 LSTLQETVSADVQGSLCNSAGIVNFPTHHHDWVRPGIMLYGSTPVIDQSAYELDLQAAME 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A+II ++   AGE + YG +    +D+  A+ ++GY DGYP  ++             
Sbjct: 240 FSAQIIALQTVNAGEGIGYGSRWLAQQDTRTALVSVGYGDGYPRVIADKTYVTVIDT--- 296

Query: 298 GKGFIKGYMVP--ILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTN 354
               I     P  ++G++ MDM + D+++      +   + ++G   ++D+VA  +GT +
Sbjct: 297 ----INHQSYPCTVIGRVAMDMIVIDVSNVPEGTALNSKVILWGNAPRVDEVATHAGTIS 352

Query: 355 YDLLVRIGTRYAK 367
           Y+LL R+  R  +
Sbjct: 353 YELLCRLSLRPQR 365


>gi|257066468|ref|YP_003152724.1| alanine racemase [Anaerococcus prevotii DSM 20548]
 gi|256798348|gb|ACV29003.1| alanine racemase [Anaerococcus prevotii DSM 20548]
          Length = 373

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 84/368 (22%), Positives = 148/368 (40%), Gaps = 26/368 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +++D+  ++ N  ++  +S N    AVVK NAYGLG   IA       V  F V +  E 
Sbjct: 6   IEVDIDKIQRNIENIKKISKNKNICAVVKANAYGLGATVIAKY-IENQVSYFAVANFLEA 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             LR+      I +L  +   +     D ++   I  +      +K +   +     + +
Sbjct: 65  KNLRIAGITKPIMILGFVSVEEANECVDYDIEIPIYDLSYAERINKSIVGDLKV--HIAL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---RTL 185
           DTG +RLG    E           +  ++    SH + AD+        Q E+F   R  
Sbjct: 123 DTGHSRLGFREFEFDRII-KLKQLERLKIKGAFSHFSTADEEDKTFTQEQYEKFERIRKK 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEAR 241
           +     IE    ++S   +  +    + R GI++YG          K   ++     ++R
Sbjct: 182 LDDQFNIEIFHIANSAASIYHDLISDMDRIGIAMYGIYPSDYLRERKDIRLEQAFLLKSR 241

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +  +++   G+ VSYG   K      IA   IGYADGY    S +           G+  
Sbjct: 242 VSFVKEINEGDSVSYGRAFKAKSRMKIATIPIGYADGYFRAFSNI-----------GEVL 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           I G +  + G++ MD  M D++D    ++ D + ++     + + A    T  Y+L+   
Sbjct: 291 INGKISKVCGRVCMDQIMVDVSDI-DCKIEDEVILY---PDIYEEANKIVTIPYELMTSF 346

Query: 362 GTRYAKFY 369
             R  + Y
Sbjct: 347 DMRLTRVY 354


>gi|254852379|ref|ZP_05241727.1| alanine racemase [Listeria monocytogenes FSL R2-503]
 gi|258605686|gb|EEW18294.1| alanine racemase [Listeria monocytogenes FSL R2-503]
          Length = 336

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 142/349 (40%), Gaps = 28/349 (8%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
             AVVK NAYG G  ++A     AG + F V  ++E + LR    Q    ++ G    ++
Sbjct: 3   LWAVVKANAYGHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKED 62

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSF 150
             +   N I   S       + + ++        L+VD+G  RLG+    EA        
Sbjct: 63  ANLAAKNHI---SLTVFREDWLEDLTLEAPLRIHLKVDSGMGRLGIRTTDEARRIETTIA 119

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA--SSSGILLGPNY 208
                QL  I +H A AD   +     QL +F+T+++  K     +   +S+  LL P  
Sbjct: 120 KDNQLQLEGIYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQI 179

Query: 209 HFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            F   R GIS+YG T            ++  +     ++ +++   G+ VSYG     T 
Sbjct: 180 GFDAIRFGISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATE 239

Query: 265 DSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD 324
              +A   IGYADG     SG                + G + PI+G++ MD T+  +  
Sbjct: 240 REWVATLPIGYADGLIRHYSGF------------HVLVDGELAPIIGRVCMDQTIIKLPR 287

Query: 325 SLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
               + G  + I G D    I  DD A    T NY++   +  R  + Y
Sbjct: 288 EF--QTGSKVTIIGTDHGNTITADDAAHYLDTINYEVTCLLNERIPRKY 334


>gi|293190212|ref|ZP_06608708.1| alanine racemase [Actinomyces odontolyticus F0309]
 gi|292821028|gb|EFF79981.1| alanine racemase [Actinomyces odontolyticus F0309]
          Length = 422

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 145/399 (36%), Gaps = 47/399 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+++N   + A +  A   A VK NAYG G   +A A  + G     V  + E   
Sbjct: 19  VDLAAIRHNLGVLRAAAPGALQLATVKANAYGHGLLPVARAALDGGADWLGVAQLAEAFT 78

Query: 71  LR----LYTP---QARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
           LR            A I               + ++   +S         +     G   
Sbjct: 79  LRRGLDEAGVARADAPILAWISTSSSDFAAAIEADIDLSVSWTWVLADICAAAREAGRPA 138

Query: 123 PYALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPS---SHVNS 176
              +++DTG +R G +L +          + +  L  +    SH++ ADDPS   +   +
Sbjct: 139 RVHVKIDTGMSRAGSTLADLPALASALRMAADDGLVDVVGAWSHMSRADDPSEAGNASTA 198

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
             +  F   +     +        L+++SGIL     H+ + R GI LYG +        
Sbjct: 199 SHVRIFEEGLAILADAGVTPRIRHLSATSGILWHREAHYDMVRAGIGLYGLSPDPEVATS 258

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   +   +   A +  ++    G   SYGG         I +  +GY DG     S   
Sbjct: 259 EQLGLTPALELRAPLTSVKVIEEGTPASYGGTWVAPTRRWIGLVPLGYGDGILRAASNQ- 317

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-------------SIEVGDYI 334
              +  V     G       P++G++ MD  M D+  +                  GD  
Sbjct: 318 ---ARVVVHTASGPFN---APLIGRVCMDQFMVDLGPAEGSPGTPTARSGQAPAIPGDIA 371

Query: 335 QIFGPDIK----LDDVALASGTTNYDLLVRIGTRYAKFY 369
            +FG  I      DD A A+GT NY+++  +G    + Y
Sbjct: 372 TLFGSGISGEALADDWAQAAGTINYEIVTHLGAHIPRIY 410


>gi|308178091|ref|YP_003917497.1| alanine racemase [Arthrobacter arilaitensis Re117]
 gi|307745554|emb|CBT76526.1| alanine racemase [Arthrobacter arilaitensis Re117]
          Length = 399

 Score =  243 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 26/376 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  IDL+A++NN   ++ +   A   AVVK +AYG G  ++A A    G +      V E
Sbjct: 26  RAVIDLSAIRNNVKQISDVVAPAAVMAVVKADAYGHGAIQVAKAALEGGARWIGCAHVTE 85

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            + LR     A +           +   D  L   +S        +   +        ++
Sbjct: 86  ALALREAGIDAPMLAWLHTEDTPFEAAIDAGLDLGVSGWELERVAAAARAVQTPARIHIK 145

Query: 128 VDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           VDTG  R G +++   + L+   +   + L +   I SHLA AD+P       QL  F T
Sbjct: 146 VDTGLGRNGSTMEALPDLLNRASDFQEEGLLRAVGIFSHLAVADEPERPETDEQLAVFNT 205

Query: 185 LISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVV 236
            I   +          +A++ GIL  P+ H+++ R G+ LYG +       +S  ++  +
Sbjct: 206 AIELIEAAGFDLEVRHIANTPGILSRPDSHYEMVRLGLGLYGLSPFEEDTPQSFGLRPAM 265

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T + R+  ++K   G+ VSYG   K   ++ + +  +GYADG P             +  
Sbjct: 266 TVKTRVANVKKVRPGQGVSYGLNYKTEGETYLGLIPMGYADGLPR------------IAT 313

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIE--VGDYIQIFGP-DIKLDDVALASGTT 353
           G    + G   P+ G+I MD  + D+   ++ E  +G    IFG     ++  A A+ T 
Sbjct: 314 GAPVTVNGRTYPVRGRIAMDQCVIDLGADINPEDFLGAEAIIFGDGGQSVNTWAYAANTI 373

Query: 354 NYDLLVRIGTRYAKFY 369
           NY+++ RI  R  ++Y
Sbjct: 374 NYEVVTRISPRVPRYY 389


>gi|213859876|ref|ZP_03385580.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. M223]
          Length = 320

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 97/331 (29%), Positives = 145/331 (43%), Gaps = 19/331 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEAR 241
                G + S+A+S GILL P  HF   RPGI LYG +             Q V++  + 
Sbjct: 182 CQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSS 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I +R   AGE V YGG     RD+ + V A+GY DGYP                G    
Sbjct: 241 LIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVL 289

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGD 332
           + G  VPI+G++ MDM   D+  +     GD
Sbjct: 290 VNGREVPIIGRVAMDMICVDLGPNAQDNAGD 320


>gi|262369147|ref|ZP_06062476.1| alanine racemase 2 [Acinetobacter johnsonii SH046]
 gi|262316825|gb|EEY97863.1| alanine racemase 2 [Acinetobacter johnsonii SH046]
          Length = 365

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 86/373 (23%), Positives = 155/373 (41%), Gaps = 27/373 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   +L++N +       N++  AVVK NAYG G E++  A  +     F +  
Sbjct: 3   RPITAVIHSQSLQHNLNVARTKMPNSQVYAVVKANAYGHGIERVYQAFKS--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKI-IFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R       I +L GI   Q+     +  L   I S  QL + ++         
Sbjct: 61  LAEAKRIRALGWTGPILLLEGIFSEQDLFDCHELGLSFSIHSEYQLEWLARF-PLEAQFD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLER 181
             L++++G NRLG   ++         +    Q    + H + AD         + Q + 
Sbjct: 120 VYLKMNSGMNRLGFRPEQYRQVWQQLSSLSQVQRLTHMMHFSDADGERFGRDGIAHQCQL 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVT 237
           F  +     G   S+++S+ IL        + R GI LYG +        +   +Q  ++
Sbjct: 180 FDAITHDLPGAR-SVSNSAAILRHGQLQSDVIRSGIMLYGSSPDYPSHSIQDWDLQPAMS 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I I++  AG+ V YG +     D  + + A GYADGY                 G
Sbjct: 239 LRSELIAIQQLKAGDSVGYGSKFIAETDMRVGIVACGYADGYQRI-----------TATG 287

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G    ++G+++MDM   D++   + +VG  + ++G       + +D+VA  SGT
Sbjct: 288 TPILVDGQRSSLVGRVSMDMLAVDLSHLPNAQVGSEVVLWGTSKQGTVLSIDEVAAGSGT 347

Query: 353 TNYDLLVRIGTRY 365
             Y+L+  +  R 
Sbjct: 348 IGYELMCAVTARV 360


>gi|297620915|ref|YP_003709052.1| putative bifunctional UDP-N-acetylmuramoyl-
           tripeptide:D-alanyl-D-alanine ligase/alanine racemase
           [Waddlia chondrophila WSU 86-1044]
 gi|297376216|gb|ADI38046.1| putative bifunctional UDP-N-acetylmuramoyl-
           tripeptide:D-alanyl-D-alanine ligase/alanine racemase
           [Waddlia chondrophila WSU 86-1044]
          Length = 813

 Score =  243 bits (619), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 97/373 (26%), Positives = 153/373 (41%), Gaps = 30/373 (8%)

Query: 10  KIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +I+L A+ +N   +   L+ +    A+VK  AYG     +A  L   G++   V+ ++EG
Sbjct: 449 RINLAAIASNIKQIRSRLTPHTEIMAMVKATAYGTQDALMAKFLKTEGIRRLGVSYIDEG 508

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR       IFVL       EK +     I V                G      L +
Sbjct: 509 ISLRKEGVDQDIFVLNAAPYEIEKAVSWQFEIAVNDKETIDQIGRMSSERGTITRVHLHI 568

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTLIS 187
           +TG +RLG   +EAL            +L  +++H AC+D+P        Q   F   I 
Sbjct: 569 NTGMSRLGCRPEEALPLARIIQAHPHLKLEGVMTHFACSDNPDEDTFTLEQSRIFDHSIE 628

Query: 188 HYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             +            +S+  L      + + R G++LYG              ++  +RI
Sbjct: 629 AIEQEGISIPFRHACNSAAALRLHFPQYNIVRIGMALYGLCP------GGTLALSLHSRI 682

Query: 243 ILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           + I   + GE +SYG    + R+   IAV  IGY DG  L  S             GK  
Sbjct: 683 VGINHCIKGETISYGRSYTVQREREKIAVIPIGYYDGLHLNYS-----------SKGKVM 731

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNYD 356
           I G   PI+G+I MD  M DIT      +GD + IFG D     +  +++A    ++ Y+
Sbjct: 732 IHGAEAPIVGRICMDYMMVDITHIPDACIGDPVLIFGEDAEGNVLSPNELAEQGNSSVYE 791

Query: 357 LLVRIGTRYAKFY 369
           L+  +G R  + +
Sbjct: 792 LISCLGPRIQRVF 804


>gi|326565252|gb|EGE15437.1| alanine racemase [Moraxella catarrhalis 12P80B1]
          Length = 383

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 168/387 (43%), Gaps = 37/387 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M++     + I   AL +N   +   L    +  A+VK +AYG G +   PAL +     
Sbjct: 1   MNTMRSTSITIHPNALTHNLQIIKSQLDPTTKVLAMVKADAYGHGIDATVPALIH--ADG 58

Query: 60  FFVTSVEEGVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-- 112
           F V  + E + ++         +  + +       + K+  D +   +I    QL +   
Sbjct: 59  FGVACLSEAMAVKQVLDGMNHKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLIWALS 118

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
            +       H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S 
Sbjct: 119 HRPKQDQFCHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSH 176

Query: 173 HVNSVQLERFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
            +N+ Q+ +F   ++  +         L +S+GI    + H    R GI+LYG     + 
Sbjct: 177 PLNAQQISKFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQ 236

Query: 228 --KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K+  +   +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP     
Sbjct: 237 SAKALNLMPAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR---- 292

Query: 286 LDSEHSPSVFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
                   V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G  
Sbjct: 293 --------VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDS 343

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAK 367
             +D+VA+ +GT  Y+L+ R+ TR  +
Sbjct: 344 PTIDEVAMCAGTIGYELMCRLTTRPKR 370


>gi|315453697|ref|YP_004073967.1| alanine racemase [Helicobacter felis ATCC 49179]
 gi|315132749|emb|CBY83377.1| alanine racemase [Helicobacter felis ATCC 49179]
          Length = 378

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 97/388 (25%), Positives = 160/388 (41%), Gaps = 31/388 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++ID  AL +N+  M+AL G      AVVK NAYG G  + +      G   
Sbjct: 1   MRPTRASYVEIDTHALAHNFQVMHALLGTKMSVMAVVKANAYGCGALEASAVFLEQGAGY 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             V + +E ++LR    Q  I +L        + +   N+   +    Q  ++S      
Sbjct: 61  LGVATYDEALELRARFAQVPILILGFTPNHMAQELIQANITQTLFCEKQARYFSDAALKL 120

Query: 119 GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
           G      ++VDTG +RLG    Q++          K  +L  I +H + AD    +    
Sbjct: 121 GRKLKVHIKVDTGMSRLGFFPTQQSAIAIAKIAQLKGLELEGIFTHHSNADALYKNYAQE 180

Query: 178 QLERFRTLISH--YKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKI------ 226
           Q  RF   +      G+E     +A+S+  L  P++   + R G++LYG    I      
Sbjct: 181 QATRFIEFLEQLRRMGLEFKYQHMANSACALSMPSFGMNMARIGLALYGLHPSIYTQDAL 240

Query: 227 -NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K   ++ V+T +A+I+ ++   AG LV YG     T+ + + V  +GY DG+   L  
Sbjct: 241 EKKGFALRHVLTLKAQIVSLKDIPAGRLVGYGEDYYCTQTTRVGVLPLGYGDGFSKILGN 300

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK--- 342
                         G + G  VP++G + MD    D+ D    + GD + + G       
Sbjct: 301 -----------KAWGLLHGQKVPVIGGVCMDQCFIDVGDI-KAQEGDEVILLGDPQSGAM 348

Query: 343 -LDDVALASGTTNYDLLVRIGTRYAKFY 369
              D+A   G  NY+ +  +  R  + Y
Sbjct: 349 GAGDIAKILGIINYEAITMLTKRLPRVY 376


>gi|222151977|ref|YP_002561137.1| alanine racemase homolog [Macrococcus caseolyticus JCSC5402]
 gi|254802369|sp|B9E8C3|ALR_MACCJ RecName: Full=Alanine racemase
 gi|222121106|dbj|BAH18441.1| alanine racemase homolog [Macrococcus caseolyticus JCSC5402]
          Length = 380

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 90/379 (23%), Positives = 155/379 (40%), Gaps = 26/379 (6%)

Query: 3   SNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           S+ + R   + ++L A+ +N+  +  L  N    AV+K N YGLG   IA  L  +G   
Sbjct: 2   SDRYYRPTFVNVNLDAISSNFKHIEKLHPNKTVIAVIKANGYGLGSVNIAKHLMTSGTDF 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC- 118
           F V +++E ++LR++  +A+I VL  + P   +      L         +   S+ +   
Sbjct: 62  FAVATLDEAIELRMHGIKAKILVLGVVDPKHIRQASRHRLALTAPDAKWVEDASRYIEAE 121

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  ++VD+G  R+G+  ++A D   +        +   +     + D  + +    
Sbjct: 122 DKPVWLHIKVDSGMGRIGVQTKQAYDMVVDKVAAVEQFIFEGVFTHFSSADEDNALTERA 181

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQT 234
            ++F  +I+  K       +S+  L          R GISLYG           +  +Q 
Sbjct: 182 YDKFLGIINDNKPQYIHCQNSAATLRYDCSECNAVRLGISLYGYYPSEFIRAVSNVKLQP 241

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            V   +    I+   +G+ VSYG       D ++A   IGYADG P  + G +       
Sbjct: 242 AVQLVSTACFIKHIKSGDTVSYGATYTAQSDEVVATFPIGYADGLPRAMQGYNINL---- 297

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALAS 350
                   +G  VPI+G++ MD  M  + D   +  G    I       +  L+ VA   
Sbjct: 298 --------EGTEVPIIGRVCMDQMMARVPDDTLL--GAQCIIIDNNADSNQSLERVAQQL 347

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT  Y++L  +  R  K Y
Sbjct: 348 GTITYEVLTSLSRRLPKRY 366


>gi|281357855|ref|ZP_06244341.1| alanine racemase [Victivallis vadensis ATCC BAA-548]
 gi|281315802|gb|EFA99829.1| alanine racemase [Victivallis vadensis ATCC BAA-548]
          Length = 377

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 108/383 (28%), Positives = 173/383 (45%), Gaps = 27/383 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+    + L++DL  L +N+H +       R  AV+K NAYGLG + +A  +  AG   F
Sbjct: 1   MNLESRVNLEVDLKKLADNFHEIRRRVSPCRLMAVLKANAYGLGVQPVAEVVKQAGAAAF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
            V  + E V+L        + +L  + P +     +  +I  ++ +      S      G
Sbjct: 61  GVAEINEAVELVPLG--LPVQILGNLLPDEIAPAVEYGVICPLNDLEMAKKISAEAVRQG 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
            +   A+ VD+G  RLG+   EA +           +L  I SH + A       +  QL
Sbjct: 119 KTATGAVTVDSGMGRLGMPAAEAAEQILAMRGLPNLKLDGIYSHFSSAFMRYDDYSLGQL 178

Query: 180 ERFRTLISHYKG-----IEASLASSSGILLGPNY---HFQLTRPGISLYGGTD-KINKSH 230
             F+TL++  KG         +A+S  +   P+     F L R GI++YG  D ++++S 
Sbjct: 179 ASFKTLLAELKGAGLEFPNVHMAASDALNNFPDSTRPPFTLARCGINMYGYYDNEVHQSM 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +  VV  + R+  +R   AG  + YG   +L +D+ +   A GYADG PL LS      
Sbjct: 239 RLAPVVELKTRLAAVRMLAAGSCIGYGRMHRLQKDTRVGTIAAGYADGLPLALSNR---- 294

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                  G   + G + P+LG+I+MD T   + ++   + GD +   G      + L+D 
Sbjct: 295 -------GYVLVNGVLCPVLGRISMDYTTISLENAPEAQPGDEVVCIGGQDGRFVSLEDW 347

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT  YDLL   GTR  + Y
Sbjct: 348 AQLKGTHVYDLLCSFGTRVRRRY 370


>gi|86137544|ref|ZP_01056121.1| alanine racemase [Roseobacter sp. MED193]
 gi|85825879|gb|EAQ46077.1| alanine racemase [Roseobacter sp. MED193]
          Length = 345

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 126/365 (34%), Positives = 184/365 (50%), Gaps = 27/365 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL I+L AL  NW ++NA++ N  TAAVVK N YGL   ++A AL   G ++FFV + E
Sbjct: 4   ARLTINLDALVTNWQNLNAMT-NCETAAVVKANGYGLDAARVATALAKGGARNFFVAAAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EGV LR    P   I V  G   G  +++ +  L P+++S+ Q+  + + +     H + 
Sbjct: 63  EGVALRRALGPGPGISVFSGHMEGDTRLLKEFQLAPMLNSLDQMLRHFETL---PGHTFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q+D+G NRLG+   E       +         L++SHLAC+D+P   +N+ QL+ FR +
Sbjct: 120 VQLDSGMNRLGMEPAEWAAVRDIAL---GQAPVLLMSHLACSDEPGHPMNAQQLQAFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ GILLG +YHF L RPG+ LYGG    +       VV  +  +I  
Sbjct: 177 TDG-LEVPRSLAATGGILLGRDYHFDLCRPGVGLYGGAPYGDA----MPVVQLDLPVIQT 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG        S IA  A GYADG    L             GG     G 
Sbjct: 232 RDVAPGESVGYGNSWVAQVPSRIATVAAGYADGLHRAL-----------MTGGIDLFAGE 280

Query: 306 -MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
              P++G+I+MD+   D+T          + I      +D +A A+GT  Y++L  +G R
Sbjct: 281 ARCPVVGRISMDLVTVDVTALPETPA--SLSILNEVQTVDTLANAAGTIGYEMLTSMGHR 338

Query: 365 YAKFY 369
           YA+ Y
Sbjct: 339 YARTY 343


>gi|81429225|ref|YP_396226.1| alanine racemase [Lactobacillus sakei subsp. sakei 23K]
 gi|123563782|sp|Q38V64|ALR_LACSS RecName: Full=Alanine racemase
 gi|78610868|emb|CAI55920.1| Alanine racemase [Lactobacillus sakei subsp. sakei 23K]
          Length = 380

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 84/383 (21%), Positives = 151/383 (39%), Gaps = 31/383 (8%)

Query: 5   EFLRLKIDLTALKNNW-HSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
              R+ +D  A+  N  + +  L G +     V+K NAYG G   +A A   AG   F V
Sbjct: 7   RPTRILVDQNAIYENIQNELKHLEGTDTVIFPVLKANAYGHGLIPVAEAAQAAGAAGFCV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTFYSKLMSCG 119
             ++E + LR       I VL    P + ++         +  +  + + T  ++ +   
Sbjct: 67  ALLDEALALRRANFTEPILVLGITQPSEIELAAANQISLTVGSLEWLQEATAIAQQVPYL 126

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSV 177
              P  L +D+G  R+G+  +  L   +                +H A ADDP       
Sbjct: 127 HPVPIHLSIDSGMGRIGMRDEAELLAAYTFIKAHSDYFDFEGVFTHFATADDPDDTYFKE 186

Query: 178 QLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHP 231
           Q  RF  L++        +   +S+  L     +  + R GISLYG         +  +P
Sbjct: 187 QSARFNQLMTALPERPRFVHVSNSATSLWHAACNGNIIRMGISLYGLNPSGNAIPDLPYP 246

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++  +  E+ ++ +++  AG  + YG   + +    I    +GYADG+   + G      
Sbjct: 247 LKQALGIESELVFVKQVAAGTKIGYGATYEASEGEWIGTIPMGYADGWLRRMQGST---- 302

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                     + G    I+G+I MD  M  +     +  G  +   G     +I L +VA
Sbjct: 303 --------VLVDGQRCEIVGRICMDQMMIRLPKRYPV--GTKVVFVGKSGDDEITLQEVA 352

Query: 348 LASGTTNYDLLVRIGTRYAKFYT 370
             + T +Y+++  +  R  + YT
Sbjct: 353 DYADTIHYEIICDLSDRIPRVYT 375


>gi|163839626|ref|YP_001624031.1| alanine racemase [Renibacterium salmoninarum ATCC 33209]
 gi|162953102|gb|ABY22617.1| alanine racemase [Renibacterium salmoninarum ATCC 33209]
          Length = 385

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 35/385 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++     +DL  +++N   + +L        A+VK +A+G G   I+ A+  AG     V
Sbjct: 12  HDLATATVDLGIIESNVRFLKSLPDAERELIAIVKADAFGHGMIPISHAMLRAGADWLGV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
             + E ++LR     A IF              + N+   ISS       ++  S  G+S
Sbjct: 72  AHLSEAMELREAGITAPIFAWLATLDTDYHPGIEANIDLSISSRLDAVRIAEAASSVGMS 131

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQ 178
               L++DTG +R G  ++          +        ++ I SHL+   +     N +Q
Sbjct: 132 AKVHLKIDTGLHRAGSPVELWPQLLAEISSADWAKSLHVAGIWSHLSDPGEAEGKANGIQ 191

Query: 179 LERFRT--LISHYKGIEA---SLASSSGILLGPN-----YHFQLTRPGISLYGGTDKINK 228
            + F     ++   GI+     L+SS+ +              L+R G  LYG     ++
Sbjct: 192 YQAFTEAVAVAASFGIKPEYLHLSSSASVGRFGKASPGTAQLNLSRAGAGLYGID---DR 248

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++  +T E+RI+  R+  AG  VSYGG     R + +A+  +GYADG P  +     
Sbjct: 249 GVGVKPAMTLESRIMQFRRVPAGSAVSYGGDWVSDRATNLALVPLGYADGIPRCIK---- 304

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                   G   F +G  +PI+G+I MD  + D T  L +EVGD + IFG     +    
Sbjct: 305 --------GASVFCRGQRLPIVGRIAMDQFVVD-TGDLQLEVGDQVLIFGTGELGEPTAL 355

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           + A  +GT  +++   +G R A+ Y
Sbjct: 356 EWAQWAGTIEHEIYTGLGPRVARRY 380


>gi|116669669|ref|YP_830602.1| alanine racemase [Arthrobacter sp. FB24]
 gi|116609778|gb|ABK02502.1| alanine racemase [Arthrobacter sp. FB24]
          Length = 402

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 90/382 (23%), Positives = 157/382 (41%), Gaps = 31/382 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++ +DL+A+ +N  ++   S      AVVK NAYG G   +A    +AG        + E
Sbjct: 18  QVSVDLSAISDNIRTLRQRSAAPHFMAVVKGNAYGHGLVDVARTALSAGADWLGTAQLHE 77

Query: 68  GVKLRLYTPQARIFVLYG---IHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
            + LR     A +              +   + ++   + SV QL   + +    G    
Sbjct: 78  AIALRRAGITAPVLSWLYLAAASSETIREALEYDVDVSLGSVAQLDVVAGIARRLGRPAV 137

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVN----- 175
             L++DTG +R G   ++  +    +   +         + +HLA AD P+   N     
Sbjct: 138 VHLELDTGLSRGGARAEDWAELVAAARTAERDGTLSVRGVWTHLAWADVPAHPANLAAVA 197

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPM 232
           + +        +  +     ++SS+ IL  P + F + R G++ YG     +       +
Sbjct: 198 AFEEAVLAARAAGLEPELRHVSSSANILDRPEFAFDMVRAGLAFYGLAPADHLAPADFGL 257

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +T  A ++L++K  AG  VSY  Q        + +  +GYADG P  +SG       
Sbjct: 258 RPALTVTAPVVLVKKVPAGTGVSYEHQAITHEPRYLGLIPLGYADGIPKGISGRSLI--- 314

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDIK----LDDVA 347
                    + G  VP++GK+ MD  M D+  D+  + VGD   +FG         DD  
Sbjct: 315 --------LLGGRRVPVIGKVCMDQFMVDLGPDANGVAVGDTAVLFGDPRTGAASADDWG 366

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
            A G+   +++ RI  R  + Y
Sbjct: 367 AAIGSHGDEIINRIAPRLPRAY 388


>gi|256824606|ref|YP_003148566.1| alanine racemase [Kytococcus sedentarius DSM 20547]
 gi|256687999|gb|ACV05801.1| alanine racemase [Kytococcus sedentarius DSM 20547]
          Length = 391

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 93/382 (24%), Positives = 145/382 (37%), Gaps = 28/382 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R  +D TA+++N       +G A    VVK   YG G    A A    G     V    
Sbjct: 11  YRAIVDATAIRDNLRRCVQWAGGADVMGVVKAGGYGHGALAAARAALAGGATLIGVAQPT 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYA 125
           E V LR     + +                 ++   +S+   L          G      
Sbjct: 71  EAVALRRAGIASEVLAWLLTPQADLDEAVAHDITLGVSAPWALDAVRDAARRAGRPVRVH 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSSHVNSVQLERF 182
           L++DTG +R GL+  +  D    +   +      +  + SHLACADDP       Q + F
Sbjct: 131 LELDTGMSRGGLAPSDWPDLFARARQAEREGSLTVQGVFSHLACADDPGHPATDHQRDAF 190

Query: 183 RTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
              ++             LA+S+  L  P+  + L RPG+  YG +   +    +   ++
Sbjct: 191 ERGLAAAVRAGLDPRWRHLANSAATLTRPDLAYDLVRPGLVSYGLSPIPDLRTSQDLGVR 250

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  AR+  +R+  AG  VSY        +  + V  +GY DG P  LSG        
Sbjct: 251 PAMTLVARLSAVRRVPAGTGVSYSHTHVTPTERWLGVVPLGYGDGVPRGLSGRGRVRVTG 310

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI----TDSLSIEVGDYIQIFGP----DIKLDD 345
              GG         P  G++ MD  + D+     D    E GD + +FG          D
Sbjct: 311 --SGGAVD-----APFAGRVCMDQFVVDLGPVEGDRPPAEAGDEVVLFGDGADGGPTAQD 363

Query: 346 VALASGTTNYDLLVRIGTRYAK 367
            A A  T +Y+++ R+G R  +
Sbjct: 364 WATAMDTISYEIVTRVGPRVPR 385


>gi|327399718|ref|YP_004340587.1| Alanine racemase [Hippea maritima DSM 10411]
 gi|327182347|gb|AEA34528.1| Alanine racemase [Hippea maritima DSM 10411]
          Length = 373

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 90/385 (23%), Positives = 152/385 (39%), Gaps = 30/385 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPAL-YNAGVQ 58
           M+ +   R  + L  L  N+  ++   G +     V+K +AYG G  +IA  L     V 
Sbjct: 1   MNFHS--RSIVHLDNLHYNFGQISQFVGKSVNIIPVIKADAYGHGIVRIAKELSIYPNVA 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
              +  ++EG  LR    +  I  +  +       + + ++ PV  ++  L         
Sbjct: 59  YLGIAHIKEGAMLRKRGVKKPILAMSCLDSFDINTMHEFSITPVAHNITLLERLIDYAKL 118

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                   L+ DTG  RLG+  +E                   +       +  +     
Sbjct: 119 NNTRIKLHLKFDTGMARLGIREEETQKTIELCKQNDKYIEIDGLMSHFSDSESDAQWTKK 178

Query: 178 QLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSH 230
           QL RF+ +I              +A+S  IL   + H    RPG+++YG    +N  K  
Sbjct: 179 QLNRFKNIIKMFYDSGIYPRLTHIANSGAILSFKDTHLNCVRPGLAMYGYAPAVNLKKII 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V+  ++++I I     GE +SY       +D  + V A GYADG P ++S      
Sbjct: 239 DLKPVLEIQSQLINIHVLKKGEGISYSRTFVADKDMKVGVVAFGYADGLPRSISNKF--- 295

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDV 346
                      + G     +G + MDM M D+TD    +V D + I G      I  D++
Sbjct: 296 --------YCIVNGQRSKSIGTVCMDMFMCDLTDI-EAKVSDDVIIMGQKNGISITADEL 346

Query: 347 ALASGTTNYDLLVRIGT--RYAKFY 369
           A  +GT +Y++L  IG   R  + Y
Sbjct: 347 AQKAGTISYEILTNIGKSIRVKRVY 371


>gi|67458471|ref|YP_246095.1| alanine racemase [Rickettsia felis URRWXCal2]
 gi|75537059|sp|Q4UNC8|ALR_RICFE RecName: Full=Alanine racemase
 gi|67004004|gb|AAY60930.1| Alanine racemase [Rickettsia felis URRWXCal2]
          Length = 462

 Score =  242 bits (617), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 127/467 (27%), Positives = 191/467 (40%), Gaps = 117/467 (25%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV------ 62
           L+I+L+A+KNN+  +  +   +   A VK N YGLG  +I+ AL     + FFV      
Sbjct: 6   LEINLSAIKNNYLLLQDICKTSLVGAAVKANGYGLGAVQISKALIEENCRHFFVASSEEG 65

Query: 63  -------TSVEEGV---------KLRLYTP------------------------------ 76
                   S  E V          +R   P                              
Sbjct: 66  VNLRKALASWHESVFRHCEKNYTVIRRSNPVKNSVSQNFFNYFSGLQQCFAPRNDGSSIH 125

Query: 77  ---------QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
                       I VL G+       + + NL PV++++ Q+  + K  +      P  L
Sbjct: 126 ATTPKALDNDVNILVLNGVFEHDALELIEYNLTPVLNNLKQIEIWQKFSNLKNRLLPCYL 185

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +TG NRLGL+  E     +N    K   L  IISHLA +++  +  N  QL RF+T +
Sbjct: 186 HFNTGINRLGLTHNEIEQLINNRDLLKGLDLQYIISHLAVSEEIDNPYNLEQLNRFKTYL 245

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH---------------- 230
            ++  ++ASLA+S GI LG +YHF L RPG +LYG    I+ S+                
Sbjct: 246 QYFPNVKASLANSGGIFLGQDYHFDLARPGAALYGLNPVIDLSNNLSYKEEFEGDTERRT 305

Query: 231 --------------------------PMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
                                      +Q  VT +A II ++       + Y       R
Sbjct: 306 AAYINVREDSSTGSTYKLPLEGGYSRGLQNPVTLKAPIIHLQNLTLDSHIGYNMTFTTER 365

Query: 265 DSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD 324
           DS+IA   +GYADG+    S             G+ FI G  VPI+G+I+MD+   D+TD
Sbjct: 366 DSVIATLPLGYADGFSRNFSNQ-----------GEVFINGRSVPIVGRISMDLINIDVTD 414

Query: 325 SLSIEV--GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              +++  G   +I G     D +A   GT  Y++L  +G+RY + Y
Sbjct: 415 LPPLDIFLGQEAEIIGNYCTPDKIASIIGTIGYEVLTSLGSRYKRIY 461


>gi|159044921|ref|YP_001533715.1| alanine racemase [Dinoroseobacter shibae DFL 12]
 gi|226711041|sp|A8LRT3|ALR_DINSH RecName: Full=Alanine racemase
 gi|157912681|gb|ABV94114.1| alanine racemase [Dinoroseobacter shibae DFL 12]
          Length = 349

 Score =  242 bits (617), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 122/366 (33%), Positives = 174/366 (47%), Gaps = 28/366 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L IDL A+  NW +++  + N R A  AVVK + YGL   ++A  L  AG + FFV  
Sbjct: 4   ATLSIDLDAIAANWRALDR-ASNRRVATGAVVKADGYGLDAGRVARTLAQAGARQFFVAV 62

Query: 65  VEEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            EEGV LR    P   I V  G   G  + I    L P+I+S  Q    ++       HP
Sbjct: 63  AEEGVTLRKALGPGPAINVFSGHMEGDTQAIAGARLTPMINSAEQ---LARHFEALPRHP 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           + +Q+DTG NRLG+   E       +         L++SHLACAD+P    N+ QL  F 
Sbjct: 120 FGIQLDTGMNRLGMEADEWAAVAEFAL---GQGPKLVMSHLACADEPGHAANAAQLAEFH 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            L      +  SL+++ GILLG  YHF +TRPGI LYGG            VV     ++
Sbjct: 177 RLTDGIT-VPRSLSATGGILLGEAYHFDMTRPGIGLYGGAPFGAAE----PVVRLSIPVV 231

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +R   AGE V YG       D  IA  + GYADG    +S     ++  V         
Sbjct: 232 QVRAVTAGESVGYGCSWVAQSDGAIATLSAGYADGLIRAMSNRAMLYAGDVA-------- 283

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
               P+ G+++MD+   D++    +     + +  P   +D +A A+GT  Y++L  +G 
Sbjct: 284 ---CPLAGRVSMDLLTVDVSHLDEVPE--ALDLLCPAQGVDRLAEAAGTIGYEILTSLGP 338

Query: 364 RYAKFY 369
           RYA+ Y
Sbjct: 339 RYARHY 344


>gi|145589102|ref|YP_001155699.1| alanine racemase [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047508|gb|ABP34135.1| alanine racemase [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 374

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 163/370 (44%), Gaps = 16/370 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N  +   I   A ++N + +  L+  ++  +V+K  AYG   +     L +     F + 
Sbjct: 10  NRPILASIHTQAFRHNLNRVRELAPESKIWSVIKARAYGHCFDAALKGLSS--TDGFALL 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIF-DTNLIPVISSVPQLTFYSKLMSCG-VS 121
            +++ V LR +  + R+ +L G+    E  +  + +   V+    Q+ +  K +  G   
Sbjct: 68  DIQDAVWLREHGWEGRVLLLEGLFHENELELAQELSCDLVVHCEAQVEWLEKYIEQGHKP 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLE 180
               L+++TG NRLG   +     T        G     ++H A AD          Q E
Sbjct: 128 FSIFLKMNTGMNRLGFKPE--AYRTAFHRLHAFGCRMHHMTHFANADQADQRPTVGEQQE 185

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVV 236
            F   I    G   SLA+S+ IL   N      RPGI LYG +        +   ++ V+
Sbjct: 186 VFERTIDGLSG-PTSLANSAAILWHRNALGGWIRPGIMLYGASPTGIYADIEHAHLKAVM 244

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             ++ II I++  AG+ V YGG+ +      I + A GYADGYP T              
Sbjct: 245 QLQSEIIDIQELKAGDGVGYGGRYQAPEAMRIGIVACGYADGYPRTAKDGTPVWVSIGAE 304

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
            G     G + PI+G+++MDM   D+ ++   ++G  ++++G  I +D+VA  S T  Y+
Sbjct: 305 DG----NGIVCPIVGRVSMDMLTIDLRNAPQAKIGSVVELWGDRIPVDEVARMSDTIGYE 360

Query: 357 LLVRIGTRYA 366
           LL  +  R  
Sbjct: 361 LLCAVAPRVP 370


>gi|32491125|ref|NP_871379.1| hypothetical protein WGLp376 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|31339945|sp|Q8D2H8|ALR_WIGBR RecName: Full=Alanine racemase
 gi|25166332|dbj|BAC24522.1| dadX [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 357

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 92/365 (25%), Positives = 161/365 (44%), Gaps = 19/365 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               ++I   AL +N  ++   +  ++  +V+K NAYG   +     L       F V  
Sbjct: 3   RKTTIRISSNALASNLRTIKNYANKSKVWSVIKSNAYGHTIKAALKGLKE--TSGFAVLE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + E V LR       I +L G     + +      I  +        Y K          
Sbjct: 61  LNEAVLLRENGWNGPILLLEGFFEESDLLEICQYKITTVIHNDWQLNYIKQYDIKSPIDV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++++G NRLG + ++ +   ++  N K      ++SH +     S+   + Q+   R 
Sbjct: 121 YLKLNSGMNRLGFNEKDFIRTWYDLSNLKKISSLTLMSHFSLG--FSTKTVNKQMNIIRK 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEA 240
            I         LA+S+ I+     H    RPGI LYG   K NK       ++ V+T E+
Sbjct: 179 -IFKILNPTLCLANSTAIIFHTYTHKDWIRPGIILYGILPKENKKISKKFNLKPVMTLES 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RII I+   + E + YG      + +LI + + GYADGYP +            F G   
Sbjct: 238 RIISIQNIKSKEYIGYGKNYYSNKSNLIGIVSCGYADGYPFS----------VPFSGTPV 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           F+ G    I+G + MDM   D+ D  + ++G  ++++G +I +++++  + TT+Y+L+ R
Sbjct: 288 FVNGTRTQIIGSVCMDMLTIDLNDCPNAKIGSKVELWGNNISINEISKLANTTSYELMCR 347

Query: 361 IGTRY 365
           I +R 
Sbjct: 348 ISSRV 352


>gi|93006286|ref|YP_580723.1| alanine racemase [Psychrobacter cryohalolentis K5]
 gi|92393964|gb|ABE75239.1| alanine racemase [Psychrobacter cryohalolentis K5]
          Length = 368

 Score =  242 bits (617), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 25/374 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + I   A+ +N + + AL+  +   A+VK NAYG G   + PAL         V ++ E 
Sbjct: 4   ITIKPAAITHNLNQVKALAPKSNVLAMVKANAYGHGVAAVLPALQQ--ADGIGVATLREA 61

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKII-FDTNLIPVISSVPQLTFY--SKLMSCGVSHPYA 125
           ++ R       I ++ G     E     + ++  VI   PQL +           +    
Sbjct: 62  LEARQLGWDKTIGLIEGAFTVDEWQQAIEHDISCVIHHAPQLDWALEQIPPVDSATRMVW 121

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++ +TG NRLG + Q       +  +   G   ++ +H A AD+    +N++Q++RF  +
Sbjct: 122 IKYNTGMNRLGFNNQTLSSAAKSLHDA--GYQLILTTHFANADNQDHPLNAIQIQRFNDM 179

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVT 237
           +S         I+ SL +S+GI+  P +H    RPGI LYG    I++S     +Q  + 
Sbjct: 180 LSTLRQTVSTNIKGSLCNSAGIVNFPEHHHDWVRPGIMLYGSAPVIDQSAYTLNLQPAME 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A+II ++   AG+ + YG +    +D   A+ +IGY DGYP  ++G            
Sbjct: 240 FSAQIIALQTVQAGDAIGYGSRWIAQQDVKTALVSIGYGDGYPRVVNGDAYVSVIDA--- 296

Query: 298 GKGFIKGYM--VPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKLDDVALASGTTN 354
               +        ++G++ MDM + D++       +   + ++G    +D+VA  + T  
Sbjct: 297 ----VNQQRYSCAVIGRVAMDMIVIDVSAVPESSALNSKVILWGDAPHVDEVATHADTIG 352

Query: 355 YDLLVRIGTRYAKF 368
           Y+LL R+  R  + 
Sbjct: 353 YELLCRLSVRPNRI 366


>gi|308183092|ref|YP_003927219.1| alanine racemase [Helicobacter pylori PeCan4]
 gi|308065277|gb|ADO07169.1| alanine racemase [Helicobacter pylori PeCan4]
          Length = 377

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 161/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNR------ 301

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 302 -----TQVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|91064848|dbj|BAE93144.1| alanine racemase [Helicobacter pylori]
          Length = 377

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNANASMLVDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLARALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|288818067|ref|YP_003432415.1| alanine racemase [Hydrogenobacter thermophilus TK-6]
 gi|288787467|dbj|BAI69214.1| alanine racemase [Hydrogenobacter thermophilus TK-6]
 gi|308751668|gb|ADO45151.1| alanine racemase [Hydrogenobacter thermophilus TK-6]
          Length = 338

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 31/361 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEE 67
           L+ID  A++ N  ++   SG  R  AVVK +AYG+G   I P L     V  F V  VEE
Sbjct: 6   LEIDADAIRQNIKAIRDFSGK-RVIAVVKADAYGIGAVHICPILEALDEVSSFAVACVEE 64

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G++LR    +  I +L G+  G+ K + +  L PV+S    L         G+   + ++
Sbjct: 65  GIELRKAGIKKDILILGGVFKGERKALIEYALTPVVSHEAHLRAIE-----GLDIGFHVK 119

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            DTG  RLG                 +    +       +       + +Q+E+F+ ++ 
Sbjct: 120 YDTGMGRLGFFED-----------VLIKDRRVKGVLTHLSSPLDKDFSLMQIEKFKKIVK 168

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            Y  ++  L SS+GI+    +     R G+++YG     +    ++  ++ +ARI+ ++ 
Sbjct: 169 AYSNVDIHLESSAGIVYMVPFA-THVRIGLAMYGEKPAPDYPIELKRAISIKARILSVKY 227

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
                 VSY       R   + V A GYADG    LS +           G  + K   +
Sbjct: 228 LPPSYPVSYSRTFITDRKKKVGVVAFGYADGLAKALSNV-----------GCLYWKDKPL 276

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
            ILG ITMDMTM D+ D    +VGD +++ GP      +A  +GT  Y+++  + +R  +
Sbjct: 277 RILGNITMDMTMVDL-DDTDAQVGDEVEVVGPHQSFSHLAKLAGTIPYEIMCHLSSRIKR 335

Query: 368 F 368
            
Sbjct: 336 V 336


>gi|261839727|gb|ACX99492.1| alanine racemase, biosynthetic (alr) [Helicobacter pylori 52]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSTVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKICALKGLEIEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG   TL         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRTLGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-EAKEGDEVILFGDKSTKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|317178709|dbj|BAJ56497.1| alanine racemase, biosynthetic [Helicobacter pylori F30]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 158/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSTVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNPNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEIEGIFTHLSNADSNIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|109947823|ref|YP_665051.1| hypothetical protein Hac_1313 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973245|sp|Q17WC4|ALR_HELAH RecName: Full=Alanine racemase
 gi|109715044|emb|CAK00052.1| unnamed protein product [Helicobacter acinonychis str. Sheeba]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 94/381 (24%), Positives = 165/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D ++L++N+H+   A+  +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVDTSSLRHNFHAAKNAIPKDAHIMAVVKANAYGVGALKASEVFLQEGAHYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PYAL 126
            ++LR   P+  I +L        +++ D NL  +I S+ Q   +S+       H    L
Sbjct: 68  ALELRSCFPKTPILILGYSPNSNAQMLIDNNLTAMIFSLEQAGVFSQAALKSQKHLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++           ++  I +HL+ A+         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEMIKKIRALNGLEVEGIFTHLSNANANIKTHAKNQMKIFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           +     + IE     +       S      N    L RPGI LYG           Q   
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNNNENRFLNLYRPGIMLYGFYPSNEMKQSCQTIL 247

Query: 234 -TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             VV+ +A+I+ I++   GE V YG       ++LI   A+GYADG    L         
Sbjct: 248 NNVVSLKAKIVQIKRVKKGEFVGYGKHFYTNEETLIGTLALGYADGLVRDLGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 +  I   + P++GK+ MD     + D +  + GD + +FG         +++A+
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKL-DGIEAKEGDEVILFGDKSTKANDANEIAM 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|94985480|ref|YP_604844.1| alanine racemase [Deinococcus geothermalis DSM 11300]
 gi|166967411|sp|Q1IYK9|ALR_DEIGD RecName: Full=Alanine racemase
 gi|94555761|gb|ABF45675.1| alanine racemase [Deinococcus geothermalis DSM 11300]
          Length = 355

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 102/371 (27%), Positives = 162/371 (43%), Gaps = 25/371 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDF 60
                 +  I  +AL++N  ++   +G  +    VK +AYG G E +A        V  F
Sbjct: 3   EMQARAQALISESALRSNLTALARQAG-TQLLLPVKADAYGHGMEIVARLAARHPAVWGF 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V    E   L        I +L      +   + D  +   ++S+ +            
Sbjct: 62  AVAVPREAATLAALGLGKPILLLTPPTLEEMGPLADLGVRLPVASLAEAEALPAHARA-- 119

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+VDTG NRLG   +EA+        + L       +H A AD+P       Q  
Sbjct: 120 ----HLKVDTGMNRLGARPEEAVRVGQRLAERGLL--EGAYTHFATADEPDLSFARQQFA 173

Query: 181 RFRTLISHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTA 238
           RF+ +++    + A  A+  G+L   P     L RPG++ YG     +    P+  V+T 
Sbjct: 174 RFQEVLAALPPVLAHAANGGGVLSFGPLPSLSLARPGLASYGFAPAHLRGVAPLTPVMTL 233

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +AR+  +     GE VSYGG  + TR +++A   IGYADGYP   +G             
Sbjct: 234 QARVTHVHAVYPGESVSYGGLWRATRKTIVATVGIGYADGYPRNATG-----------KA 282

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDL 357
              ++G   P+LG+I MD  M D+TD   + VGD+++++G   I + DVA   GT  Y++
Sbjct: 283 CVLVRGECRPVLGRICMDQCMVDVTDL-EVRVGDWVEVWGTDKITVTDVAAWGGTVEYEV 341

Query: 358 LVRIGTRYAKF 368
           L  +G R  + 
Sbjct: 342 LTGLGARVERV 352


>gi|182680013|ref|YP_001834159.1| alanine racemase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182635896|gb|ACB96670.1| alanine racemase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 373

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 126/369 (34%), Positives = 191/369 (51%), Gaps = 21/369 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW ++ A+SG     AVVK +AYGLG   +  ALY AG + FFV    EG
Sbjct: 15  LTIDLAAIVANWQTLQAVSG-TECGAVVKADAYGLGLHPVVKALYEAGCRTFFVAHAFEG 73

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-------SKLMSCGVS 121
            ++R   P+A I+VL G+ P QE      NL PV++SVP++  +        K    G  
Sbjct: 74  AEVRALAPEAIIYVLNGVRPAQEYTFAAHNLRPVLNSVPEVEDWGQYCATSHKRAPDGSL 133

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L++DTG N+LGL L +     H      L  ++L++S L  ADD    +   Q+E 
Sbjct: 134 LKAGLRIDTGVNQLGLKLYDLERVDHL---SPLFDVTLLLSQLVTADD---SIADRQIEA 187

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           F  + + Y G+ ASLA+S+ I L  N   + L RPG +LYGG     + +PM+ VV  +A
Sbjct: 188 FDKIRARYPGVPASLANSAAIFLDNNPPLYDLVRPGYALYGGNPVPGRPNPMRPVVRLDA 247

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            II +R    G  V      K      + + A G ADG P  L+  +        +GGK 
Sbjct: 248 HIIQVRVLEPGHSVGVERLWKARGPRRVIMVAAGLADGIPSGLTDNEKH------VGGKA 301

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            I+G + P +  I MD ++ D++D+  +E G+ +++ G  + +DD A  +  + Y++L  
Sbjct: 302 LIQGTLCPYVSDIAMDYSVIDVSDATYLERGEMVELLGKTVTIDDFAAMANVSGYEILSN 361

Query: 361 IGTRYAKFY 369
           +G R  + Y
Sbjct: 362 LGRRCHRRY 370


>gi|317180214|dbj|BAJ58000.1| alanine racemase, biosynthetic [Helicobacter pylori F32]
          Length = 377

 Score =  241 bits (615), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNANASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEIEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|172040070|ref|YP_001799784.1| hypothetical protein cur_0390 [Corynebacterium urealyticum DSM
           7109]
 gi|171851374|emb|CAQ04350.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 488

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 104/406 (25%), Positives = 163/406 (40%), Gaps = 53/406 (13%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           E ++L +DL AL NN          A+  AVVK + Y  G  +IA    + G     V +
Sbjct: 81  ELIQLVVDLGALANNTRFFADFVAPAQLMAVVKADGYNHGALRIAQTALDHGAAVVGVAT 140

Query: 65  VEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           V E + LR   P      A IF             FD  L   + S+             
Sbjct: 141 VPEALLLRERGPVKDGEPATIFAWMWEPAMDLTPAFDAELTLGVPSLAHARSLIDQARSR 200

Query: 120 VSHPYA---LQVDTGFNRLGLSLQEA---LDFTHNSFNKKLGQLSLIISHLACADDP-SS 172
            + P     +  DTG +R G+S  E    +     +  + L  +  + +HLA AD+    
Sbjct: 201 QAKPRPVVGVMSDTGMSRSGISPAEWQETIALLAAAEQEGLIAVDGVFTHLASADEDAQR 260

Query: 173 HVNSVQLERFRTLISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
            V   Q +RF+  I+  +          +A++   L  P+ H +L RPG+ +YG      
Sbjct: 261 AVTDRQHQRFQQAIADCRAAGMAVPRNHIANTPATLTRPDMHHELVRPGLGVYGVDPVAG 320

Query: 228 KS---------------HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAA 272
            +                P+Q  ++  A++I  R    GE VSYGG      D+  AV A
Sbjct: 321 GTPTGAAENAVPGLPDVLPLQRTMSMRAKVITTRVVPKGESVSYGGIWTAPEDTRTAVVA 380

Query: 273 IGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS----- 327
            GYADG P + SG             +  I G     +G+I MD  +  +  + S     
Sbjct: 381 AGYADGVPRSASG-----------KMQVSINGESYQQVGRICMDQFVVALGPAESAAAEA 429

Query: 328 IEVGDYIQIFGP----DIKLDDVALASGTTNYDLLVRI-GTRYAKF 368
           ++ GD+  IFG     +  ++D+A A+GT  Y+++    G R  + 
Sbjct: 430 VQPGDWAVIFGDPAAGEPSVEDLAAAAGTIPYEVVTMPRGPRVQRV 475


>gi|304440218|ref|ZP_07400108.1| alanine racemase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371267|gb|EFM24883.1| alanine racemase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 403

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 90/386 (23%), Positives = 162/386 (41%), Gaps = 31/386 (8%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           + + E  R   L++DL  L +N  ++   +S N+   AVVK NAYG G +KI   L   G
Sbjct: 16  LKNKELTRSCFLEVDLDKLIDNIRTIKRNISLNSSIIAVVKANAYGFGIKKIVDTLILEG 75

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
           +  F V +++E +++R Y    +I +L        K   +  +   I +   +    K+ 
Sbjct: 76  IDYFAVATLQEALEIRKYHSDIKIMILGYTDRNLYKKAIENRVELSIYTKDDVLNLEKIA 135

Query: 117 -SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
               ++    + ++TG NR+G    +       +                 A D +S   
Sbjct: 136 SEINLTAQINIPLETGMNRIGFVEDDKFIENMETIKNSKNIEVSGAFSHFAAADTNSCYT 195

Query: 176 SVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS- 229
             Q ++F  +    + I        +++S  I+    ++    RPGI +YG ++ + K  
Sbjct: 196 RKQFDKFIRMTRIIENIGIEIPYKHISNSMAIMNFKEFNLDAVRPGIIMYGSSEGLKKEG 255

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ + + +A+I  I+     E VSYG      RD+ +A   IGYADG    LS     
Sbjct: 256 FDLKYIGSLKAKISNIKTIKKDEKVSYGLTYTCDRDTKVATLPIGYADGVVRILSNKID- 314

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                       + G   P++G+I MD  M D+TD  + ++     I G     +I +++
Sbjct: 315 ----------VIVNGKRCPVIGRICMDQMMVDVTDV-NCDMDTICTIIGMDGDEEITIEE 363

Query: 346 VALASGTT--NYDLLVRIGTRYAKFY 369
           VA  +G    +Y       +R  + Y
Sbjct: 364 VAGLAGEIATSYS--THFSSRIPRVY 387


>gi|221635562|ref|YP_002523438.1| alanine racemase [Thermomicrobium roseum DSM 5159]
 gi|221158172|gb|ACM07290.1| alanine racemase [Thermomicrobium roseum DSM 5159]
          Length = 433

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 100/379 (26%), Positives = 149/379 (39%), Gaps = 29/379 (7%)

Query: 9   LKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             IDL  L  N  ++   L  +    AV+K NAYG G    A A    G +   V  +EE
Sbjct: 42  AIIDLDQLATNARTLVRFLPPDVELLAVLKANAYGHGLVPSALAALAGGARWLGVARIEE 101

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYAL 126
           G+ LR     A + VL   +  + +     +L   + S+  +       S  G      L
Sbjct: 102 GLLLRQAGLTAPVIVLGPPNHARLRAAVAADLTLAVGSLADVEAVRSAASALGRPARVHL 161

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VDTG +R G +  EA+       +  L     I +H A AD P       Q+ERFR + 
Sbjct: 162 EVDTGMHRFGATPDEAVALARGLASDPLLSFEGIYTHFATADAPDCRTLRRQMERFRAVR 221

Query: 187 SH--YKGIEASLASSSGI-------LLGPNYHFQLTRP-GISLYGGTDKINKSHPM--QT 234
                +GI   +   +         L  P+   +     GI  YG T       P   + 
Sbjct: 222 ERLLAEGIHPPVVHQANSAATLRGALGDPDLPGRRVVRVGILFYGLTPDPALLLPPGIRP 281

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +T +AR+       AGE +SYG        +   +  +GYADG P  LS          
Sbjct: 282 ALTLQARLARCFVVHAGEGISYGHTYVTKALTHCGLVPVGYADGLPRALSNQ-------- 333

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   ++G   PILG++ MD T   +      E+G  + + G      +   D A  S
Sbjct: 334 ---GWFLVQGQRCPILGRVCMDQTTISLEAVPQAEIGTTVIVLGTGEDGAMTAWDAATLS 390

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT  Y++L  + TR  + Y
Sbjct: 391 GTIAYEILTSLATRIPRLY 409


>gi|225156581|ref|ZP_03724914.1| Alanine racemase [Opitutaceae bacterium TAV2]
 gi|224802813|gb|EEG21062.1| Alanine racemase [Opitutaceae bacterium TAV2]
          Length = 375

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/378 (25%), Positives = 160/378 (42%), Gaps = 28/378 (7%)

Query: 8   RLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +IDL AL+ N   +  +L  + R  AVVK +AYG G  + A  L +AG   F V S+ 
Sbjct: 4   WAEIDLAALERNLRLIRASLPAHIRYVAVVKADAYGHGLPQTAARLMHAGADLFAVASIA 63

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E   LR   P   +  L  + P +++ I D N+   +S+  +   F +   + G      
Sbjct: 64  EAAALREIGPDWPVLSLGPVLPEEDRHIADYNVAVTVSTTDEVARFSAAARAAGRPIAVH 123

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L++DTG  RLG+  ++A     N  +    +L  + +H +  D+ +    + Q  RF   
Sbjct: 124 LKIDTGMGRLGVWHEQAETIYQNLRDAPGLRLEGVFTHFSSPDEDA-AFTAEQRRRFVAA 182

Query: 186 ISHYKGIEA-SLASSSGILLGPNY-----HFQLTRPGISLYGGTDKIN---KSHPMQTVV 236
           I   +G++   +   +    G         F   R G+  +G              + V 
Sbjct: 183 IGRCRGLDPAKIFVHADNSAGLETIETAGPFNAARIGLLQFGVLPHAGSLLAQVRTEPVF 242

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +   RI L++   AG  +SYG    L+RDS +A+   GY DG P   S            
Sbjct: 243 SFRTRIGLVKPLPAGTDISYGRTHTLSRDSRVAILTGGYGDGIPRHASNR---------- 292

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDIKLD----DVALASG 351
                ++G   P+LG++TMD T+ D+TD       G+ + + G     +    + +    
Sbjct: 293 -ACVLVRGRRCPVLGRVTMDQTIIDVTDLPADTGPGEEVVLVGRQNGAEIALTEFSRWGD 351

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  ++ L  +  R A+ Y
Sbjct: 352 TIPWETLCSVTKRVARIY 369


>gi|89899300|ref|YP_521771.1| alanine racemase [Rhodoferax ferrireducens T118]
 gi|122480109|sp|Q221R3|ALR_RHOFD RecName: Full=Alanine racemase
 gi|89344037|gb|ABD68240.1| alanine racemase [Rhodoferax ferrireducens T118]
          Length = 374

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 84/384 (21%), Positives = 151/384 (39%), Gaps = 39/384 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL++N       + +A+  A+VK NAYG G E++   L       F +  
Sbjct: 3   RPIQATIHTAALRHNLARARLAAPDAKVWAIVKANAYGHGIERVFEGLRA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R    +  I +L G+      ++    +L   +    Q+   +      V+  
Sbjct: 61  LDEAQRVRALGWRGPILLLEGVFELRDLELCSRLDLWHTVHCDEQIDMLASHK-TKVAQR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + Q                   +I+H + AD         Q+  F 
Sbjct: 120 VFLKMNSGMNRLGFTPQRYRAAWTRLNALPQVDEISLITHFSDADGARGIT--EQMAVFA 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHF--------QLTRPGISLYGGTDKINK----SHP 231
            +     G E +L++S+  LL                 RPGI++YG      +       
Sbjct: 178 EVTRDLPG-ERTLSNSAATLLHTPARQPGDGFVASDWVRPGIAIYGSAPDFPQHSATDWG 236

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +Q  +T  A+II  +    G  V YG      +   + V A GYADGYP           
Sbjct: 237 LQPSMTLTAKIIATQTVDTGASVGYGSTFVADKPIQVGVVACGYADGYPRLC-------- 288

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL----SIEVGDYIQIFGPD-----IK 342
                G    + G     +G+++MDM   D++        + +G  + ++G       + 
Sbjct: 289 ---PTGTPVLVNGIRTRTVGRVSMDMLAVDLSAVTAAGGQVGIGSEVTLWGRAANGLVLG 345

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VA  +GT  Y+L+  +  R  
Sbjct: 346 IDEVAQPAGTVGYELMCALAPRVP 369


>gi|317177728|dbj|BAJ55517.1| alanine racemase, biosynthetic [Helicobacter pylori F16]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKIPILILGYSPNSNASMLIDNDLSAMIFSLEQAEIFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRTLKGLEIEGIFTHLSNADSNIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERIY 376


>gi|154507817|ref|ZP_02043459.1| hypothetical protein ACTODO_00299 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797451|gb|EDN79871.1| hypothetical protein ACTODO_00299 [Actinomyces odontolyticus ATCC
           17982]
          Length = 422

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/399 (21%), Positives = 143/399 (35%), Gaps = 47/399 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+++N   + A +  A   A VK NAYG G   +A A  + G     V  + E   
Sbjct: 19  VDLAAIRHNLGVLRAAAPGALQLATVKANAYGHGLLPVARAALDGGADWLGVAQLAEAFT 78

Query: 71  LRL-------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
           LR            A I               + ++   +S         +     G   
Sbjct: 79  LRRGLDEAAVARADAPILAWISTSSSDFAAAIEADIDLSVSWTWVLADICAAAREAGRPA 138

Query: 123 PYALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPS---SHVNS 176
              +++DTG +R G +L +          + +  L  +    SH++ ADDPS   +   +
Sbjct: 139 RVHVKIDTGMSRAGSTLADLPALASALRMAADDGLVDVVGAWSHMSRADDPSEAGNASTA 198

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
             +  F   +     +        L+++SGIL     H+ + R GI LYG +        
Sbjct: 199 SHVRIFEEGLAILADAGVTPRIRHLSATSGILWHREAHYDMVRAGIGLYGLSPDPAVATS 258

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   +   +   A +  ++    G   SYGG         I +  +GY DG     S   
Sbjct: 259 EQLGLTPALELSAPLTSVKVIEEGTPASYGGTWVAPTRRWIGLVPLGYGDGILRAASNQA 318

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-------------SIEVGDYI 334
                + F            P++G++ MD  M D+  +                  GD  
Sbjct: 319 RVVVHTAFGPFN-------APLIGRVCMDQFMVDLGPAEGSPGTPTARSGQAPAIPGDIA 371

Query: 335 QIFGPDIK----LDDVALASGTTNYDLLVRIGTRYAKFY 369
            +FG  I      DD A A+ T NY+++  +G    + Y
Sbjct: 372 TLFGSGISGEALADDWAQAADTINYEIVTHLGAHIPRIY 410


>gi|315586885|gb|ADU41266.1| alanine racemase [Helicobacter pylori 35A]
          Length = 377

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLEQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSSGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|307637632|gb|ADN80082.1| Alanine racemase [Helicobacter pylori 908]
 gi|325996226|gb|ADZ51631.1| Alanine racemase [Helicobacter pylori 2018]
 gi|325997820|gb|ADZ50028.1| Alanine racemase [Helicobacter pylori 2017]
          Length = 377

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N++++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFNAVKSIVPKDACVMAVVKANAYGAGALKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYNPNANASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPTFKSIEIVKKIRALKGLEVEGIFTHLSNADANIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG           QT++
Sbjct: 188 LEQLLNQKIEFKYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +ARI+ I++   GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + + +  + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKL-NGIEAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|322832740|ref|YP_004212767.1| alanine racemase [Rahnella sp. Y9602]
 gi|321167941|gb|ADW73640.1| alanine racemase [Rahnella sp. Y9602]
          Length = 357

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 154/366 (42%), Gaps = 20/366 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   +  +AL  N + +   + N++   VVK N YG G  +I  +L       F +  
Sbjct: 3   RPISATLSQSALTQNLNIIRGFAPNSKVWTVVKANGYGHGISRIWRSLSA--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E + LR    Q  I +L G    ++  I D   +                S  +    
Sbjct: 61  FNEAILLRESGWQGPILLLEGFFTAEDLAIVDKYRLTTAVHSEWQIKALAQASISLPVSI 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+V++G NRLG + + A          K      ++SH A AD         Q+     
Sbjct: 121 YLKVNSGMNRLGFAPERAGAVWQQLRELKQVGEITLMSHFATADSVEG--VDAQMSVINL 178

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEA 240
              + +G    LA+S+  L  P+ H    RPGI +YG +            +Q V+T ++
Sbjct: 179 AGQNIRG-PRCLANSAATLWHPHTHHDWIRPGIIIYGASPSGEWKDIAHTGLQPVMTLKS 237

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +I +++  AG  V YGG+  +TR   I V A GYADGYP                G   
Sbjct: 238 ELIAVQELNAGARVGYGGRYSVTRPQRIGVVACGYADGYPRHA-----------PSGTPV 286

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           ++ G      G ++MDM   D+T     ++G  ++++G ++ +DDVA A+GT  Y+LL  
Sbjct: 287 WVDGVRTTTTGTVSMDMLAVDLTPCPQAQMGAPVELWGNNLPVDDVATAAGTLGYELLSA 346

Query: 361 IGTRYA 366
           +  R  
Sbjct: 347 LAPRVP 352


>gi|169334855|ref|ZP_02862048.1| hypothetical protein ANASTE_01261 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257593|gb|EDS71559.1| hypothetical protein ANASTE_01261 [Anaerofustis stercorihominis DSM
           17244]
          Length = 374

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 92/362 (25%), Positives = 156/362 (43%), Gaps = 30/362 (8%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
             L         +K NAYG G  + A AL    +  F V  + EG++LR    +  I +L
Sbjct: 25  RVLPKGCELMPAIKANAYGHGLVETAEALNKMEIYHFCVAEISEGIRLRKAGVKGEILIL 84

Query: 84  YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEAL 143
              H     ++   +L     +V    + S L  C ++    +++DTG +RLG   +   
Sbjct: 85  GYTHLSNINLVKKYDLTQ---TVIDYRYASSLDECKLNIKVHIKIDTGMHRLGEHFENIT 141

Query: 144 DFTHNSFNKKLGQLSLIISHLACADDPSS---HVNSVQLERFRTLI-----SHYKGIEAS 195
           +      + K   +  + SHL  +D           +Q+  F  ++     + Y  ++  
Sbjct: 142 NII-RILSFKNIDVKGVFSHLCVSDSIDKKDIEFTKLQINHFNNIVKVLKENGYTNLKFH 200

Query: 196 LASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHPMQTVVTAEARIILIRKALAG 251
           +  S G+L  P+  +   R GI+LYG     +DKI     ++ V++ +AR+ ++R+ +  
Sbjct: 201 IQGSYGVLNYPDLKYDYARVGIALYGVLSKKSDKIKLDLDLKPVLSLKARVEVVRELMKN 260

Query: 252 ELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILG 311
           E V YG   K  +   IAV +IGYADG    LS             G   I G  VPI+ 
Sbjct: 261 ETVGYGLDFKAEKKCKIAVVSIGYADGISRKLSNN----------NGFVLINGIKVPIIA 310

Query: 312 KITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           +I MD    D++    ++  D +   G     +I  +D+A    T   ++L R+G R  +
Sbjct: 311 RICMDQLFIDVSKVDDVKRDDEVVFIGQSGNEEISAEDMANNLDTITNEILSRLGERLKR 370

Query: 368 FY 369
            Y
Sbjct: 371 IY 372


>gi|149926132|ref|ZP_01914394.1| alanine racemase [Limnobacter sp. MED105]
 gi|149824950|gb|EDM84162.1| alanine racemase [Limnobacter sp. MED105]
          Length = 365

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 160/374 (42%), Gaps = 27/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  +   A+  N + +  L GN     VVK N YG G E+I   L+        +  
Sbjct: 3   RPIRAVVKPAAISANINRIKELLGNVVMMPVVKANGYGHGLERIIDGLWQ--ADALAILE 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +E   +LR       I +L G           +     V+ +  QL   + +     +H 
Sbjct: 61  IEGAARLRCMGWNKPIVLLEGCFDQTDLLKAMELRCDWVVHNQNQLNDLAAIAQWQPAHK 120

Query: 124 YALQV--DTGFNRLGLSLQEALDFTHN---SFNKKLGQLSLIISHLACADDPSS----HV 174
             + +  +TG NRLG    +A            K      ++++H A AD+         
Sbjct: 121 PQIFLKLNTGMNRLGFQPAQAQAAIQWLDEFTLKHQWPTPVLMTHFANADEAEPRARLPF 180

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPM 232
              Q +    L   +    +SLA+S+G L  P     + RPGI++YG T   N   ++ +
Sbjct: 181 AQRQHQILMDLKPDHW--RSSLANSAGSLNFPMLAGDIARPGIAIYGATPGPNAAANYGL 238

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           +  +   + II I++   G+ V YG + + +    IAV A GYADGYP            
Sbjct: 239 KAAMIFSSEIIAIQEVKQGDRVGYGSRWEASDSGRIAVVACGYADGYPRHA--------- 289

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
               G   +++G++ P+ G+++MDM   D++   + +VG  ++++G  I +D VA   GT
Sbjct: 290 --PDGTPTYVEGHVAPVAGRVSMDMMTIDVSHIPNAKVGSTVELWGEHIPVDVVADRCGT 347

Query: 353 TNYDLLVRIGTRYA 366
             Y+LL  I  R  
Sbjct: 348 IGYELLCAIAPRVP 361


>gi|317182240|dbj|BAJ60024.1| alanine racemase, biosynthetic [Helicobacter pylori F57]
          Length = 377

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/381 (22%), Positives = 157/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++ ++L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSSSLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNANASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEIEGIFTHLSNADSNIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD   +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEAILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|46446265|ref|YP_007630.1| putative bifunctional
           UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine
           ligase/alanine racemase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399906|emb|CAF23355.1| putative alanine racemase [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 841

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 94/374 (25%), Positives = 160/374 (42%), Gaps = 26/374 (6%)

Query: 11  IDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I+L A+KNN   +   ++   R   ++K  AYG    ++   L   GV    V+ VEEGV
Sbjct: 470 INLAAIKNNLDMIRTKITPETRLMIIIKAFAYGTDDIQLGKFLSAYGVDILGVSYVEEGV 529

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            L+       IF +        K++     + V           +           L ++
Sbjct: 530 ALKRAGITLPIFTINAAQYEIAKVVKWELEVGVSDVNFISALAQEAKKSSKCIKVHLHIN 589

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-VNSVQLERFRTLISH 188
           TG  R G   +EAL+      +     L  I++H ACADDP        Q++ F ++I  
Sbjct: 590 TGMGRFGCRPEEALNLALLITSSSHLILEGIMTHFACADDPRHDSFTQEQIQCFDSVIEQ 649

Query: 189 -----YKGIEASLASSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPMQTVVTAEAR 241
                 +      A+SSG +      + + R G++ YG  G+D + ++  ++  ++  +R
Sbjct: 650 LKRHCIQAKWTHAANSSGTIRFSLPQYNMVRIGLATYGLYGSDAVKQALDLRLALSLTSR 709

Query: 242 IILIRKALAGELVSYGGQKKLTRDSL-IAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           I+ I     GE +SYG    + +++  IAV  +GY DG     SG               
Sbjct: 710 IVGINHCRKGETISYGRNYLIEKENQTIAVLPVGYFDGLHRHYSG-----------KAHV 758

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNY 355
            I G   P++G I MD  M DITD     +GD + IFG D     +  +++A+   +  +
Sbjct: 759 LIHGKKAPMVGSICMDYMMVDITDIPHANIGDKVLIFGEDEYGHYLSPEELAMNGNSIVH 818

Query: 356 DLLVRIGTRYAKFY 369
           +L+  +G R  + +
Sbjct: 819 ELITCLGPRIQRIF 832


>gi|261838314|gb|ACX98080.1| alanine racemase [Helicobacter pylori 51]
          Length = 377

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 163/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRTLKGLEIEGIFTHLSNADSNIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|303326566|ref|ZP_07357009.1| alanine racemase [Desulfovibrio sp. 3_1_syn3]
 gi|302864482|gb|EFL87413.1| alanine racemase [Desulfovibrio sp. 3_1_syn3]
          Length = 352

 Score =  240 bits (612), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 100/357 (28%), Positives = 155/357 (43%), Gaps = 29/357 (8%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG-IHPGQ 90
              VVK +AYG G   +A AL  AG + F V +V EGV LR       I  L G I    
Sbjct: 7   IMPVVKSDAYGHGLLPVARALDGAGARRFAVGTVCEGVALREAGLGQTIVPLMGAISRED 66

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
            +     +L P+++    +   +           AL+ +TG NRLG S +E      +  
Sbjct: 67  WQAAAAHDLTPLLTDFEDIEKAAACCPADRPFRVALKCETGMNRLGFSAEELPAALESLR 126

Query: 151 NKKLGQLSLIISHLACADDPSSH-VNSVQLERFRTLIS----HYKGIEASLASSSGILLG 205
                   L +SHLACAD P        Q ERF ++ +     +  I  SL +S+G L  
Sbjct: 127 RFPRLAPVLALSHLACADMPGETAYTQAQAERFASMCAVLREAFPDIARSLGNSAGALGL 186

Query: 206 PNYHFQLTRPGISLYGGTDKINKSH-----PMQTVVTAEARIILIRKALAGELVSYGGQK 260
           P   ++  RPG++LYGG      +       ++ V++  + ++ +R+  AG+ VSYG   
Sbjct: 187 PESRYEACRPGLALYGGNPFAGTAWETRGTGLEWVMSVSSPVLQVRQLKAGQSVSYGRIF 246

Query: 261 KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMF 320
              +   +AV A GYA G+   LS                 I G  VP +G++ M M M 
Sbjct: 247 TAPQAMTVAVVAAGYATGFARALSNRIDL-----------LINGRRVPQVGRVCMSMLMA 295

Query: 321 DITDSLSIEVGDYIQIFG-------PDIKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
           D++    +  GD   I G         +   ++A   GT  Y++L  +G+   + Y+
Sbjct: 296 DVSSLPDVRTGDTAWILGGPAAPGQRPVSAQEMADELGTIPYEILCLMGSTNPRVYS 352


>gi|297564802|ref|YP_003683774.1| alanine racemase [Meiothermus silvanus DSM 9946]
 gi|296849251|gb|ADH62266.1| alanine racemase [Meiothermus silvanus DSM 9946]
          Length = 373

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 160/372 (43%), Gaps = 19/372 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               L+++L +L +N   + + +  ++   +VK NAYG G   +   L   G     V +
Sbjct: 2   RPAWLEVNLDSLAHNVALLRSKAPASQLVGIVKANAYGHGAVWVGRELLRLGAWGLAVAT 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHP 123
           V EG +LRL   Q R+ ++  +HP Q +   +T+LI  +S++       +   + G    
Sbjct: 62  VSEGRELRLGGVQGRVLLMGSLHPDQAREALETDLIASLSTLEGAQALDAAARALGKIAE 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+ DTG  R+G   +EA             +++ + SH A A++       +QL  FR
Sbjct: 122 VHLEFDTGMGRVGFPWEEAQQVKEALEQFSHLKVTGLYSHFADAEENL-EFTYMQLANFR 180

Query: 184 TLISHY-KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
            +   +  G    LA+S+G+    +  F   RPGI+LYG       +  ++ +    A+ 
Sbjct: 181 RVREVWGPGYFCHLANSAGVFNFRDDSFDAIRPGIALYGLLP----NLGLKPIARLLAKP 236

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
            L+++   G  + Y G         IA   +GYADG P  +    +             I
Sbjct: 237 TLVKQLPPGRKIGYSGLYTTQDHEWIATLPVGYADGMPRLVYNRATVRLLQPSPEEGRLI 296

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYI-QI----FGPDIKLDDVALASGTTNYDL 357
                P++G+I+MD     I   + +   D + ++    F P   L   A  +GT +Y+ 
Sbjct: 297 ----CPVVGRISMDQITVRIPGPVDL---DTVFEVVTADFDPGSSLWGWAEMTGTVSYEP 349

Query: 358 LVRIGTRYAKFY 369
            VR+  R  + Y
Sbjct: 350 AVRLAARLPRVY 361


>gi|326562891|gb|EGE13178.1| alanine racemase [Moraxella catarrhalis 46P47B1]
 gi|326563668|gb|EGE13920.1| alanine racemase [Moraxella catarrhalis 103P14B1]
 gi|326573276|gb|EGE23244.1| alanine racemase [Moraxella catarrhalis 101P30B1]
          Length = 383

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 168/387 (43%), Gaps = 37/387 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M++     + I   AL +N   +   L    +  A+VK +AYG G +   PAL +     
Sbjct: 1   MNTMRSTSITIHPNALTHNLQIIKSQLDRTTKVLAMVKADAYGHGIDATVPALIH--ADG 58

Query: 60  FFVTSVEEGVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-- 112
           F V  + E + ++         +  + +       + K+  D +   +I    QL +   
Sbjct: 59  FGVACLSEAMAVKQVLDGMNHKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLIWALS 118

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
            +       H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S 
Sbjct: 119 HRPKQDQFCHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSH 176

Query: 173 HVNSVQLERFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
            +N+ Q+ +F   ++  +         L +S+GI    + H    R GI+LYG     + 
Sbjct: 177 PLNAQQISKFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQ 236

Query: 228 --KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
             K+  +   +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP     
Sbjct: 237 SAKALNLMPAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR---- 292

Query: 286 LDSEHSPSVFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
                   V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G  
Sbjct: 293 --------VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDS 343

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAK 367
             +D+VA+ +GT  Y+L+ R+ TR  +
Sbjct: 344 PTIDEVAMCAGTIGYELMCRLTTRPKR 370


>gi|304413460|ref|ZP_07394933.1| alanine racemase [Candidatus Regiella insecticola LSR1]
 gi|304284303|gb|EFL92696.1| alanine racemase [Candidatus Regiella insecticola LSR1]
          Length = 378

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 156/383 (40%), Gaps = 36/383 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
             +   + L+AL +N  ++       N++  +VVK NAYG G  ++   L       F +
Sbjct: 3   RPISATVHLSALHHNLVAVRDRVSYANSKIWSVVKANAYGHGLARVWRCLEK--TDGFAL 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             + + V LR    Q  I +L G    ++  + D   +  +          +        
Sbjct: 61  LDLNDAVLLREQGWQKPILLLEGFFKTEDLALIDHYNLTTVVHSDWQLAALENAKLKKPV 120

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+ ++G NRLG   +EA +    +      +   ++SH A A    +  N  +  + 
Sbjct: 121 EVYLKFNSGMNRLGFPCEEAHEIWQRAKQIANIKHLTLMSHFANAAHNGNIDNEYRFIQ- 179

Query: 183 RTLISHYKGIEASLASSSGILLGP---------------NYHFQLTRPGISLYGGTDKIN 227
                      +SLA+S+ IL  P               ++     RPGI LYG +    
Sbjct: 180 -QNCQSIPADCSSLANSAVILWHPSVYTSPINNLSNNNLSHFCHWVRPGIMLYGASPNGQ 238

Query: 228 ----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
               K   ++  ++  + ++ ++   AG+ V YG   +      I + A GYADGYP   
Sbjct: 239 VQAIKDLGLRPAMSLHSELLAVQTLKAGDTVGYGSHYRANEAQRIGIVACGYADGYPRNA 298

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL 343
                        G    ++G +   LG ++MDM   D+      +VG  ++++G  + +
Sbjct: 299 -----------PTGTPILVEGVLTKTLGAVSMDMLAVDLKPCPHAQVGSIVELWGNHLPI 347

Query: 344 DDVALASGTTNYDLLVRIGTRYA 366
           DDVA+A+GT +Y+L+  +  R  
Sbjct: 348 DDVAMAAGTISYELMCALSARVP 370


>gi|126642221|ref|YP_001085205.1| alanine racemase 1 [Acinetobacter baumannii ATCC 17978]
          Length = 325

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 23/339 (6%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKII 94
           +VK NAYG G +    AL  +    F V  ++EG+++R    +  + ++ G+    E  I
Sbjct: 1   MVKANAYGHGVKDCLAALNAS--DAFGVACLQEGLEIRELGFEQPVTLIEGVFSEDEMPI 58

Query: 95  -FDTNLIPVISSVPQLTFYSKLMSCGVS--HPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
             +     VI    Q  +  K     ++      +++++G NRLG    E ++      +
Sbjct: 59  AIEQKFECVIHHQQQFEWLIKHKQAYITQGLKVWVKLNSGMNRLGFKNPEIIEVIKTLKS 118

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           +    +  +    A  D     +N  Q ++F  +      I AS  +S+ I   P  +F 
Sbjct: 119 EGFTCVLAMHFANADVD---HPLNEQQKQQFLHVKETCDPILASCCNSAAIFKWPELNFD 175

Query: 212 LTRPGISLYGGTDKINK---SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLI 268
             RPGI LYG +   +K      ++ V+T  A II +    AGE V YG      +   I
Sbjct: 176 YVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEIIALNHIEAGEHVGYGSTFCAQQAMDI 235

Query: 269 AVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSI 328
           A+ +IGY DGYP                     I   + P++G+++MDM   D+T++  +
Sbjct: 236 AIVSIGYGDGYPRAY-----------VKQNFVAIDSKLCPVVGRVSMDMIAIDVTNT-QV 283

Query: 329 EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           ++G  ++++G    +DDVA A+GT  Y+LL R+ +R  +
Sbjct: 284 KLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSRPVR 322


>gi|262201658|ref|YP_003272866.1| alanine racemase [Gordonia bronchialis DSM 43247]
 gi|262085005|gb|ACY20973.1| alanine racemase [Gordonia bronchialis DSM 43247]
          Length = 381

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 104/383 (27%), Positives = 161/383 (42%), Gaps = 27/383 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M S       +DL A+ +N   +   +      AVVK +AYG G   +A A   AG  + 
Sbjct: 1   MTSAALT-ATVDLDAIAHNISVLRE-TSRTDVLAVVKADAYGHGAVPVARAALAAGAAEL 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCG 119
            V  + EG+ LR     A I      +          +L   +SS  Q     +   S G
Sbjct: 59  GVAVIGEGLALRAAGIDAHITTWLHTNSADFAAAIAADLDLALSSRRQLAAVVAAARSAG 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNS 176
            +   ++++DTG  R G++  E  DF  +           +   + HLA  D+P   +NS
Sbjct: 119 TTATASVKLDTGLGRSGVAPDEWADFADDLAKAVAEGAVQVRALMCHLARGDEPDHPLNS 178

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q  R     +    +        +A+S   L  P+    L RPGI++YGG     +   
Sbjct: 179 QQAARLDDARADLVRVGAAPEIMHIANSPAALTRPDLARDLVRPGIAIYGGAPIPGRDFG 238

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   +T  A++ L+++  AG+ VSYG      RD+ IAV   GYADG P   SG      
Sbjct: 239 LIPAMTLRAQVALVKRIAAGQGVSYGHTWVADRDTTIAVIPAGYADGVPRPASGRLRIR- 297

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGP----DIKLDDV 346
                     I   +V  +G+I MD  + D+      I  GD+ ++FG       +  D 
Sbjct: 298 ----------IGDRVVDQVGRICMDQFVIDLGPEAGGIAEGDWAELFGTGADGGQRAQDW 347

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A A GT +Y+++  IG R  + Y
Sbjct: 348 ADAVGTIDYEIVSGIGARAVREY 370


>gi|210135131|ref|YP_002301570.1| alanine racemase [Helicobacter pylori P12]
 gi|226711046|sp|B6JMG2|ALR_HELP2 RecName: Full=Alanine racemase
 gi|210133099|gb|ACJ08090.1| alanine racemase [Helicobacter pylori P12]
          Length = 377

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNANASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|148652591|ref|YP_001279684.1| alanine racemase [Psychrobacter sp. PRwf-1]
 gi|172048511|sp|A5WDJ3|ALR_PSYWF RecName: Full=Alanine racemase
 gi|148571675|gb|ABQ93734.1| alanine racemase [Psychrobacter sp. PRwf-1]
          Length = 374

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 157/380 (41%), Gaps = 28/380 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S     + +D  AL +N +  ++ +    +  A+VK +AYG G     PAL +     
Sbjct: 1   MRSAS---IILDSKALTHNLNCVIDTVPDTTKVLAMVKADAYGHGIAHCLPALKD--ADG 55

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKII---FDTNLIPVISSVPQLTFYSKLM 116
             V    E   +R       + ++ G+    E           I       Q        
Sbjct: 56  LGVACFTEAQHIRELGWDKILVLIEGVFSETEWQQSIEAQCQSIIHHQDQVQWALNHLPP 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                    L+++TG NRLG    E  D   +  +       ++ SH A AD P+   N+
Sbjct: 116 ENSPCRTVWLKLNTGMNRLGFESDELGDVAQSLVDAG--YELILTSHFANADAPNHPSNA 173

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q++ F   +          I+ASL +S+GIL     HF   RPGI LYG +     S  
Sbjct: 174 KQIDTFTQALQQLREQVDPSIKASLCNSAGILNFKACHFDWVRPGIMLYGSSPVEGVSAQ 233

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              ++ V++ +A ++ I    AG  V YG +    R  +  + +IGY DGYP  + G   
Sbjct: 234 MLKLKPVMSFKASLMAIHNIAAGTSVGYGSRFVANRPIVKGIVSIGYGDGYPRVVDGSAW 293

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLD 344
                           Y  P++G++ MDM   D+TD  + +VG  + ++G        +D
Sbjct: 294 VSVQLAGEHSS-----YKCPVIGRVAMDMIAIDLTDVPNPKVGSQVMLWGDPELGAPSVD 348

Query: 345 DVALASGTTNYDLLVRIGTR 364
           ++A ++ T  Y+LL R+  R
Sbjct: 349 EIAESAHTLGYELLCRVTQR 368


>gi|297380139|gb|ADI35026.1| alanine racemase [Helicobacter pylori v225d]
          Length = 377

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR Y  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSYFSKTPILILGYSPNANASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|218961188|ref|YP_001740963.1| Alanine racemase (partial match, alr-like) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729845|emb|CAO80757.1| Alanine racemase (partial match, alr-like) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 629

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 98/372 (26%), Positives = 163/372 (43%), Gaps = 19/372 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E   ++IDL+A + N + + + L    +   +VK +AYG G  +I+      G     V 
Sbjct: 8   ERSWVEIDLSAFRTNLNILKSFLEPQQQFMMIVKADAYGHGAREISKIACEEGAVYLGVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           + EEG  LRL   QA + +L      +   I D +L   +SS+      +K         
Sbjct: 68  NPEEGRLLRLQGCQAPVLILSPCLKNEINTILDNDLAVNVSSLDFARALNKTAKTKNKQA 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VDTG +R G+   E +DF +         +  + +H A A++     +  Q ERF
Sbjct: 128 VVHLKVDTGMHRSGILDSEFIDFFNKIAKMDNLLIEGVFTHFASAENDP-EFSKQQEERF 186

Query: 183 RTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
             +I +       L   +S+ ++ G   H  L R GI  YG     NK   +Q V+T + 
Sbjct: 187 WNIIDNLPFTPTYLHIDNSNALVNGLGKHSNLVRLGIMAYGIQVPGNKDIALQPVMTFKT 246

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +  I+    GE V Y       +D L  +  IGYADGY   LS             G  
Sbjct: 247 ILSQIKHIAKGESVGYNRSWTAKKDCLYGILPIGYADGYDFMLSNC-----------GVV 295

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP---DIKLDDVALASGTTNYDL 357
           F+   +  ++G+I+MDM   D++      +GD   + G    + + +++    G  +Y+L
Sbjct: 296 FLDNKICNVIGRISMDMICVDLSPIEHPAIGDVAILLGGSALETRAENLVSKYGGNSYEL 355

Query: 358 LVRIGTRYAKFY 369
           L ++G R  ++Y
Sbjct: 356 LCQVGRRAKRYY 367


>gi|208434844|ref|YP_002266510.1| alanine racemase, biosynthetic [Helicobacter pylori G27]
 gi|226711047|sp|B5Z7U5|ALR_HELPG RecName: Full=Alanine racemase
 gi|208432773|gb|ACI27644.1| alanine racemase, biosynthetic [Helicobacter pylori G27]
          Length = 377

 Score =  239 bits (611), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNTNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEIEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSARANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIAYETISTLSKRLERVY 376


>gi|308062256|gb|ADO04144.1| alanine racemase [Helicobacter pylori Cuz20]
          Length = 377

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 86/381 (22%), Positives = 158/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSTVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR Y  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSYFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEIEGIFTHLSNADSNIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLSNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAT 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|329945781|ref|ZP_08293468.1| alanine racemase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328528229|gb|EGF55207.1| alanine racemase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 446

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 93/415 (22%), Positives = 156/415 (37%), Gaps = 65/415 (15%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  IDL A+ +N   +   +      AVVK +AYG G   IA    +AG     V  + E
Sbjct: 32  RAVIDLEAVAHNGRLLAQ-TAGVPWMAVVKADAYGHGLGPIALTALSAGASWLGVAQLAE 90

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF---------------- 111
            + LR    +A +        GQ   +    L  +  +                      
Sbjct: 91  ALTLRALLDEAGVARPVEEPSGQAPRVLSWLLPVMDPARAACEDSPLRAALKADLDLSVS 150

Query: 112 --------YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF---NKKLGQLSLI 160
                    +   +   +    L+VDTG +R G   ++            ++    +  +
Sbjct: 151 TLSQLEALAAAARAQATTARLHLKVDTGMSRGGAMAEDLPALAAALRRAVDEGAVDVVGL 210

Query: 161 ISHLACADDPSSHVNSVQLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRP 215
            SHL+ AD+P+S      L R+R        +        LA++ G+L  P     L R 
Sbjct: 211 WSHLSRADEPTSGSTEEHLVRYRQAERIVCEAGLTPSIHHLAATGGLLWHPEARMDLVRA 270

Query: 216 GISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
           GI LYG +            ++  +  E+ ++ +++   G+ VSYGG      D  + + 
Sbjct: 271 GIGLYGLSPDPSVTTGAELGLRPAMRLESELVQVKRIDVGQAVSYGGTWSAPTDRWVGLV 330

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS---- 327
            +GY+DG P   S             G   I G M  I+G++ MD  + D+  +      
Sbjct: 331 PLGYSDGVPRAASST-----------GPVGIGGMMTAIVGRVCMDQVVIDLGPAQDETGS 379

Query: 328 -----IEVGDYIQIFGPD--------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                 +VGD   ++G            +D+ A A GT NY+++ R+G R  + Y
Sbjct: 380 SLPAPAQVGDTTVLWGAPDALGQEAVPTVDEWAQACGTINYEIVTRLGARIPRCY 434


>gi|225873754|ref|YP_002755213.1| alanine racemase [Acidobacterium capsulatum ATCC 51196]
 gi|225793021|gb|ACO33111.1| alanine racemase [Acidobacterium capsulatum ATCC 51196]
          Length = 428

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 103/425 (24%), Positives = 169/425 (39%), Gaps = 72/425 (16%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +  +I    L +N+  +  L+  + R AAVVK NAYG G    AP L  AG +   VT
Sbjct: 12  RPVWAEISRARLLHNFSMLQQLASPDIRLAAVVKANAYGHGATLCAPWLAAAGAEWLGVT 71

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV--- 120
           SVEEGV +R      RI V+ G+  G+ + + +  L PV+     L   ++         
Sbjct: 72  SVEEGVAVRAVCATQRILVMSGLWQGEAEAVLEHCLTPVVWEPFHLDLLARAARQAKLPP 131

Query: 121 -SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNS 176
            + P  L++DTG +R G +    L+       ++         +++H    D+  S V +
Sbjct: 132 QALPVHLEIDTGMSRQGAAHGGLLEELLRRLREEPDSPLLIEGVLTHFHSPDELDSPVTA 191

Query: 177 VQLERFRTLISHYKGIEASLASSSG----------------ILLGPNYHFQLTRPGISLY 220
            Q+  F T +        + A                     L   ++   + RPG++LY
Sbjct: 192 AQIAAFATAVDTIAAAGLAPALLHAGNSTSLLTGHGLDALRALAARHHAQLMLRPGLALY 251

Query: 221 GGTDKINKSH---------------------------------PMQTVVTAEARIILIRK 247
           G T +   S                                    Q V++ ++RI+ +R 
Sbjct: 252 GYTPQAGGSVSEREEQSPRLKAEGYGLQPAHSHSLRGGASALEGFQPVLSLKSRIVSLRT 311

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AG    Y G  +  R + +A+  IGYADG    LSG            G   ++G+  
Sbjct: 312 IAAGATAGYNGTFRAARSTRLALLPIGYADGLSRLLSGR-----------GHVLVRGHRA 360

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGT 363
           PI G+I+MD T+ D++      +GD   + G      I  +D+A    T  +++L  I  
Sbjct: 361 PIAGRISMDQTILDVSGIPEAAIGDEAVLLGEQGNDRITAEDLAALCQTIPWEILTSIAA 420

Query: 364 RYAKF 368
           R  + 
Sbjct: 421 RVPRV 425


>gi|45655817|ref|YP_003626.1| alanine racemase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|73921668|sp|Q75FF2|ALR_LEPIC RecName: Full=Alanine racemase
 gi|45602788|gb|AAS72263.1| alanine racemase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 389

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 94/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++I   +L NN  +  + L  N+   A++K NAYG G E +      AG+  
Sbjct: 11  MKDTYSSWIEISKRSLSNNLDNFRSILRPNSTLTAILKSNAYGHGIEPMTRLCIEAGISR 70

Query: 60  FFVTSVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
             V S+EE + +R    +  I ++    +P + K +       ++ S P+          
Sbjct: 71  IGVNSIEEALLIRNIDSKIPILIMGEIQNPEKRKNVLSDPNFWIVFSRPETARILSSFLP 130

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L++DTG  RLG   +          N  +    +     +  D      + +Q
Sbjct: 131 APKL--HLKIDTGMGRLGSHGETLKQTLSELKNVGITLGGICTHFASTEDVLEHKYSLMQ 188

Query: 179 LERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI------- 226
            ++F   I       Y  +     +S+  +L PN HF + R GISLYG    I       
Sbjct: 189 TQKFEEAIFLAKSFGYNHLIRHACASASTMLFPNAHFDMVRIGISLYGLWPSIQTRLSLN 248

Query: 227 ---NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
              NK+  +  +++ ++RI+ I+   A   + YG   + +  + +A+  +GY +G    L
Sbjct: 249 LTGNKNFQLNPILSWKSRIVHIQYHPADSYIGYGSTFQTSYPTKVAIVPVGYYEGLDRKL 308

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S             G   + G    I+G+I M+MTM D+T     EVG  + I G D   
Sbjct: 309 S-----------SNGDMLVLGKKARIIGRICMNMTMLDVTHIPGAEVGSIVTIIGQDGEE 357

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKF 368
            I  DD+A  + T NY+++ RI     + 
Sbjct: 358 SITADDLADRTHTINYEVMTRISESIPRI 386


>gi|158523327|gb|ABW70802.1| alanine racemase [Helicobacter pylori]
          Length = 377

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 160/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNANASMLIDNDLSAMVFSLEQAEVFSQIALKAKKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSARANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|332978217|gb|EGK14948.1| alanine racemase [Psychrobacter sp. 1501(2011)]
          Length = 392

 Score =  239 bits (610), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 100/397 (25%), Positives = 167/397 (42%), Gaps = 36/397 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M S     + ++  AL +N    +NA+    +  A+VK +AYG G +   P+L       
Sbjct: 1   MRSAS---ITLNSAALTHNLTQVINAIPEKTKVLAMVKADAYGHGVKYCLPSLQK--ADG 55

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK---IIFDTNLIPVISSVPQLTFYSKLM 116
             V    E  ++R    Q  + ++ G+   QE    I  +   I    +  Q        
Sbjct: 56  LGVACFTEAKQIRDLGWQKVLVLIEGVFSQQEWAESIEAECQSIIHHQNQVQWALQQVPA 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           S        L+++TG NRLG   +E +       +       ++ SH A AD P    N+
Sbjct: 116 SNSPCRTIWLKLNTGMNRLGFEPEELVSVAQTLVDAG--YNLILTSHFANADRPEHPSNT 173

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---K 228
            Q++ F   +          I+ASL +S+GI+  P  HF   RPGI LYG T       +
Sbjct: 174 NQIKMFTESLQDLREKVDPNIKASLCNSAGIINFPECHFDWVRPGIMLYGSTPLDGISAQ 233

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS---- 284
           S  ++ V++  A ++ I    AG  V YG +    R  +  + +IGY DGYP  +     
Sbjct: 234 SLQLKPVMSFSASLMAIHNIAAGAHVGYGSRFVANRPIVKGIVSIGYGDGYPRVVDGSAW 293

Query: 285 ---------GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQ 335
                            +    G   ++ Y  P++G++ MDM   D+T+  +  VG  + 
Sbjct: 294 VSVQLAAHENETDIDRSTENDIGSTTVRRYKCPVIGRVAMDMIAIDLTEVPNPTVGCQVT 353

Query: 336 IFGP----DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           ++G        +DD+A ++ T  Y+LL R+  R  + 
Sbjct: 354 LWGDPDEAAPSVDDIANSAHTLGYELLCRVTQRPIRI 390


>gi|24217378|ref|NP_714861.1| alanine racemase [Leptospira interrogans serovar Lai str. 56601]
 gi|73921669|sp|Q8EX97|ALR_LEPIN RecName: Full=Alanine racemase
 gi|24202458|gb|AAN51876.1|AE011618_3 alanine racemase [Leptospira interrogans serovar Lai str. 56601]
          Length = 389

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 94/389 (24%), Positives = 160/389 (41%), Gaps = 34/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++I   +L NN  +  + L  N+   A++K NAYG G E +      AG+  
Sbjct: 11  MKDTYSSWIEISKRSLSNNLDNFRSILRPNSTLTAILKSNAYGHGIEPMTRLCIEAGISR 70

Query: 60  FFVTSVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
             V S+EE + +R    +  I ++    +P + K +       ++ S P+          
Sbjct: 71  IGVNSIEEALLIRNIDSKIPILIMGEIQNPEKRKDVLSDPNFWIVFSRPETARILSSFLP 130

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L++DTG  RLG   +          N  +    +     +  D      + +Q
Sbjct: 131 APKL--HLKIDTGMGRLGSHGETLKQTLSELKNVGITLGGICTHFASTEDVLEHKYSLMQ 188

Query: 179 LERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI------- 226
            ++F   I       Y  +     +S+  +L PN HF + R GISLYG    I       
Sbjct: 189 TQKFEEAIFLAKSFGYNHLIRHACASASTMLFPNAHFDMVRIGISLYGLWPSIQTRLSLN 248

Query: 227 ---NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
              NK+  +  +++ ++RI+ I+   A   + YG   + +  + +A+  +GY +G    L
Sbjct: 249 LTGNKNFQLNPILSWKSRIVHIQYHPADSYIGYGSTFQTSYPTKVAIVPVGYYEGLDRKL 308

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S             G   + G    I+G+I M+MTM D+T     EVG  + I G D   
Sbjct: 309 S-----------SNGDMLVLGKKARIIGRICMNMTMLDVTHIPGAEVGSIVTIIGQDGEE 357

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKF 368
            I  DD+A  + T NY+++ RI     + 
Sbjct: 358 SITADDLADRTHTINYEVMTRISESIPRI 386


>gi|313885619|ref|ZP_07819369.1| alanine racemase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619349|gb|EFR30788.1| alanine racemase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 395

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 87/401 (21%), Positives = 152/401 (37%), Gaps = 49/401 (12%)

Query: 4   NEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   +  ++L+A++ N       L       AVVK NAYGLG E++A     AG +   V
Sbjct: 7   HRPTQAIVNLSAIEANIKWQQAKLEPGQSLIAVVKANAYGLGAEQVARTALKAGAEGLAV 66

Query: 63  TSVEEGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL------ 115
            +V+EG+ LR     Q  I VL    P     I   NL   +S +       +       
Sbjct: 67  ATVDEGISLRKAGIIQVPILVLGLTDPQGIAEILHYNLTVTVSDLDFFDQAYQQLLTTDD 126

Query: 116 --MSCGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
             +   +  P+ L +DTG  R+GL  + E  DF              + +H +       
Sbjct: 127 LYLLDNLKLPFHLALDTGMTRIGLRTETEVSDFVTKIQAYDWVDFQGVFTHFSTIGGGPQ 186

Query: 173 HVNSVQLERFRTLIS---HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK---- 225
                Q +R+  L +       I     S+ G+           R G+++YG        
Sbjct: 187 DYVEYQWQRWLDLTALIPESVKIRHYANSAMGLWQDRQPASTWVRYGVAMYGLDPMDRIP 246

Query: 226 -------------INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAA 272
                        +N+  P+Q  +   + I+ +++   G  +SYG   + +    IA   
Sbjct: 247 SHFKEQVDTSQLGLNEEDPLQPALELISEIVYVKEIPQGTKISYGATYQSSEKEWIATIP 306

Query: 273 IGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD 332
           IGYADG+  +   +               ++G+  P++G+I MD  M  +        G 
Sbjct: 307 IGYADGWLRSYQVI------------PVLVEGHACPVVGRINMDQLMIRLPHYYP--KGT 352

Query: 333 YIQIFGPDIKLDD----VALASGTTNYDLLVRIGTRYAKFY 369
            + + GPD    +    +A  + T  Y+++  +  R  + Y
Sbjct: 353 PVTLIGPDHGAYNHISWIAQQTSTIGYEIMTNLSDRIPRIY 393


>gi|227497232|ref|ZP_03927472.1| alanine racemase [Actinomyces urogenitalis DSM 15434]
 gi|226833280|gb|EEH65663.1| alanine racemase [Actinomyces urogenitalis DSM 15434]
          Length = 441

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 95/413 (23%), Positives = 163/413 (39%), Gaps = 67/413 (16%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           IDL AL +N   + + +G A   AVVK +AYG G E +A    +AG     V  ++E + 
Sbjct: 38  IDLEALAHNARVLASKAGRAW-MAVVKADAYGHGIEAVARTCLDAGASWLGVAQLDEALH 96

Query: 71  LR----------------LYTPQARIFVLYGIH----------PGQEKIIFDTNLIPVIS 104
           LR                  + QA   + + +                     +L   +S
Sbjct: 97  LRGLLDAAGVARPRSADEPASSQAPRLLCWLVPVLSPQQAAREGSPLWEALAGDLDLSVS 156

Query: 105 SVPQLTFYSKLMSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--- 160
           ++ QL          GV     ++VDTG +R G  L++       +   +      +   
Sbjct: 157 TLTQLQAVRVAARAQGVVARIHVKVDTGMSRAGAVLEDLPALAREARAAQDAGEVDVVGL 216

Query: 161 ISHLACADDPSSHVNSVQLERFR--TLISHYKGIEA---SLASSSGILLGPNYHFQLTRP 215
            SHL+ AD+P S      L RFR    I +  G+      L+++ G+   P+    L R 
Sbjct: 217 WSHLSRADEPDSGSTEDHLARFRRGEQILNQAGLHPGVRHLSATGGLEWHPHARLDLVRI 276

Query: 216 GISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
           GI LYG + +      +   ++ V+  +A ++ +++  AG+ VSYGG      D  + + 
Sbjct: 277 GIGLYGFSPEPAVATSQELGLRPVMRLQAPLVQVKRIPAGQAVSYGGTWSAPTDRWVGLV 336

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE-- 329
            +GY DG P   +             G  ++ G    ++GK+ MD  + D+  +      
Sbjct: 337 PLGYGDGIPRAAAST-----------GPVWVAGRRTTVVGKVCMDQVVIDLGPATDAAGS 385

Query: 330 -------VGDYIQIFGPD-------IKLDDVALASGTTNYDLLVRIGTRYAKF 368
                   GD   ++G            +D A    T +Y++L R+G R  + 
Sbjct: 386 PLPAPAAAGDRAIVWGDPDRDGEGVPTAEDWARVCSTISYEILTRLGPRVPRV 438


>gi|167757231|ref|ZP_02429358.1| hypothetical protein CLORAM_02781 [Clostridium ramosum DSM 1402]
 gi|167703406|gb|EDS17985.1| hypothetical protein CLORAM_02781 [Clostridium ramosum DSM 1402]
          Length = 341

 Score =  239 bits (609), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 90/352 (25%), Positives = 150/352 (42%), Gaps = 29/352 (8%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
             VVK   YG G  ++A      G++ F V +++EG+KLR +     I VL   HP    
Sbjct: 1   MVVVKAEGYGHGLVEVAKHCQKMGIEAFAVATIDEGIKLREHGIYGEILVLGYSHP---I 57

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
              + +   +I ++       +L   G      +++DTG +RLG  L +          +
Sbjct: 58  RAIELHNYRLIQTIVNREHARQLNESGHMINVHIKIDTGMHRLGFDLSDYESIKEIYDYQ 117

Query: 153 KLGQLSLIISHLACADDP--SSHVNSVQLERF-----RTLISHYKGIEASLASSSGILLG 205
            +           C             Q+  F        + HY   +  L SS G++  
Sbjct: 118 FIHIQGYFTHLCVCDSKRKVDQEYTQKQIAAFYDLINELKLRHYDIGKVHLQSSYGLVNY 177

Query: 206 PNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKK 261
           P  +    R GI +YG     N        ++  +T +A+I ++     G  + YG   K
Sbjct: 178 PEINADYARVGILMYGVYSTFNDYSKVQLDLKPALTIKAQIAMLHYLTKGASLGYGLTYK 237

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
           + RDS+IAV  IGY DG P  LS             G   IKG   PI+G+I MD  + D
Sbjct: 238 VNRDSVIAVIPIGYGDGLPRILS-----------SNGSVLIKGQKCPIVGRICMDQMLVD 286

Query: 322 ITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++   I   D + + G     +I+++++AL + T + ++L R+G+R  + Y
Sbjct: 287 VSEISDISDNDLVTVIGQDGTEEIRVEEIALEANTISNEILSRLGSRLPRIY 338


>gi|296135085|ref|YP_003642327.1| alanine racemase [Thiomonas intermedia K12]
 gi|295795207|gb|ADG29997.1| alanine racemase [Thiomonas intermedia K12]
          Length = 367

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 154/380 (40%), Gaps = 32/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N   +   +  ++  AVVK NAYG G  +   AL       F +  
Sbjct: 3   RPISAVIHTAALSHNLLRVRQATPASKVWAVVKANAYGHGIARAYSALRT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  KLR       I +L G   P    +    NL  V+    Q+ + +       +H 
Sbjct: 61  LAEAEKLRALGWVGPILLLEGCFAPEDLALCERLNLWHVVHCREQIDWLAVHRG-NRTHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NR+G S +                    ++H ACAD+ S       L RF 
Sbjct: 120 VFLKMNTGMNRVGFSPEAYAAAWERLNALPQVGEITHMTHFACADEASG--IDEALARFA 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDK----INKSHPMQTVVT 237
             + H  G      S++ ++ G +        RPGI+LYG +            ++  ++
Sbjct: 178 RGVGHLPGERTLANSAAVLVHGADPRVATDWVRPGIALYGSSPTGLALDAAHWKLRPAMS 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I I+   AGE V YG +    R   I V A GYADGYP                G
Sbjct: 238 LRSELIDIQHIAAGECVGYGARFTAPRPMRIGVVACGYADGYPRVAPN-----------G 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIE----VGDYIQIFGPD----IKLDDVALA 349
               + G    ++G+++MDM   D+    +      +G  + ++G D    + +D+VA A
Sbjct: 287 TPIVVDGVRTQLVGRVSMDMITVDLEPVFAAGNRPMIGSPVLLWGQDAQAELSIDEVAAA 346

Query: 350 SGTTNYDLLVRIGTRYA-KF 368
           +GT  Y+L+  +  R   + 
Sbjct: 347 AGTLGYELMCALAQRVPVRV 366


>gi|251799573|ref|YP_003014304.1| alanine racemase [Paenibacillus sp. JDR-2]
 gi|247547199|gb|ACT04218.1| alanine racemase [Paenibacillus sp. JDR-2]
          Length = 389

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 146/375 (38%), Gaps = 26/375 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +I L+ ++ N  ++      + +  AVVK N YG G  + A A   AG     V  +
Sbjct: 5   TWAEISLSRIRENMLNIRRSLPVSVKLMAVVKANGYGHGDIESAKAAMRAGADYLAVAYL 64

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPY 124
           EE ++LR    +  I VL  I P   ++    +L   ++S    +       C       
Sbjct: 65  EEAIRLRDAGLKLPILVLTPIRPELVQLALRHDLSLTVTSAKWFSEMRIFKPCPAGKLRV 124

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +++DTG  R+G+  +E  D        +   +    +H A A    +     Q  RF  
Sbjct: 125 HVKMDTGLGRIGIRTKEEWDELVPWLQAEDVDVDGFYTHFATAGQEDTGFLEQQTARFLD 184

Query: 185 LISHYK----GIEASLASSS-GILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTA 238
           +    +     I     + S   L  P+    + R G ++YG    K+     ++  ++ 
Sbjct: 185 MKEWTRASGLAIRHYHCAGSVAALRFPHLAMDMVRIGAAMYGFYPAKLACPVKLEPALSL 244

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +R+I ++K + GE + Y    +   +  I    IGYADG+   + G D           
Sbjct: 245 HSRLIQVKKLVKGEYIGYDNSYRAEEEEWIGTVPIGYADGWAQRMQGTD----------- 293

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
              I G+  PI GKI MD  M  +        G  + + G      I   ++A+  G+  
Sbjct: 294 -VLIGGHRTPIAGKICMDQLMIKLPG--PCAEGTPVTLIGTQGGQRITFAELAVHIGSVA 350

Query: 355 YDLLVRIGTRYAKFY 369
            ++   +G R  + Y
Sbjct: 351 QEVSTSLGGRITRTY 365


>gi|83952042|ref|ZP_00960774.1| alanine racemase [Roseovarius nubinhibens ISM]
 gi|83837048|gb|EAP76345.1| alanine racemase [Roseovarius nubinhibens ISM]
          Length = 345

 Score =  238 bits (608), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 131/364 (35%), Positives = 184/364 (50%), Gaps = 26/364 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L IDL A   NW +++A + +  TAAVVK +AYGLG +K+A AL  AG + FFV   E
Sbjct: 4   ATLTIDLNAAVANWRALDAKT-DCETAAVVKADAYGLGADKLARALARAGARSFFVAVAE 62

Query: 67  EGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EG  LR    P   I V  G  PG   +I D  L P+I+S+ Q+    + +     H + 
Sbjct: 63  EGAALRQALGPGPNICVFSGHMPGDADMIGDLELTPMINSLDQM---IRHVEALPGHAFG 119

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           LQ+DTG NRLG+   E       +  +      LI+SHLACAD+P   +N+ QL  FR +
Sbjct: 120 LQLDTGMNRLGMEPSEWAAVRDVALAQ---NPVLIMSHLACADEPDHPMNAQQLRTFREM 176

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +  SLA++ G+LLG +YHF L RPGI  YGG       H    V T +  +I  
Sbjct: 177 TDG-LDVPRSLANTGGVLLGRDYHFDLCRPGIGTYGGAPFAEARH----VATLDIPVIQC 231

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R    GE V YG     +R + IA  + GYADG    +                 +  G 
Sbjct: 232 RDVAPGETVGYGNSYVASRPTRIATISAGYADGILRAMG-----------PKTGLWCDGK 280

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            +PI G+I+MD+   D+T          +Q+ GP+  +D +A A+GT  Y++L  +G RY
Sbjct: 281 RLPIAGRISMDLIGVDVTALGQDPK--SLQLLGPNQGVDTLADAAGTIGYEILTSLGARY 338

Query: 366 AKFY 369
            + Y
Sbjct: 339 TRRY 342


>gi|254448149|ref|ZP_05061612.1| alanine racemase [gamma proteobacterium HTCC5015]
 gi|198262275|gb|EDY86557.1| alanine racemase [gamma proteobacterium HTCC5015]
          Length = 323

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 143/336 (42%), Gaps = 17/336 (5%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           N   R  IDL A+++N       +  +R  A VK +AYG G  ++  A     V    V 
Sbjct: 2   NRPARATIDLEAIRHNVKVAKRAAPQSRVLAAVKADAYGHGLTRVLSAFEE--VDALAVA 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           SVEE V LR  + +  + +     P    +     L PV     QL + S+  S      
Sbjct: 60  SVEEAVALRAVSDKDIVVLQGIRQPEHLALCTKHALQPVFHQSQQLDWLSRWSSQDSMLS 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+VD+G +RLG  L           +         ++H+ACADD S      QL+ F 
Sbjct: 120 VWLKVDSGMHRLGFDLDAVERAFVRLSDHAAVNRVACMTHMACADDRSDDYTLQQLKAFE 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEA 240
            + +       S A+S+ +L  P  H+   RPGI LYG +  I    +   +Q  +   A
Sbjct: 180 RVTADLSA-PRSAANSACVLGWPQAHYDWVRPGIMLYGASPFIGDTAQDWGLQPAMRLTA 238

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I+ I+    G+ V YG      +   + V AIGY DGYP   +                
Sbjct: 239 PIVAIKHCRKGDAVGYGRSWVCPKPMTLGVVAIGYGDGYPRHANNQ-----------TPA 287

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           ++KG+   ++G+++MDM   D+T    + + D + +
Sbjct: 288 WVKGHTTHLVGRVSMDMIAIDLTGYTDVSIDDEVVL 323


>gi|149196848|ref|ZP_01873901.1| alanine racemase [Lentisphaera araneosa HTCC2155]
 gi|149139958|gb|EDM28358.1| alanine racemase [Lentisphaera araneosa HTCC2155]
          Length = 360

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 95/375 (25%), Positives = 161/375 (42%), Gaps = 23/375 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M       L IDL ALK N+H +  LS  ++   V+K NAYGLG ++IA  L  +G    
Sbjct: 1   MAHQHRNTLSIDLRALKENFHKLEKLSSPSQVMPVLKANAYGLGAKEIAAELKESGATII 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  + E +   L      I +L  I P +  +    N I  I S+      S       
Sbjct: 61  AVADLNEALD--LRDLDLDILILGDIIPEEIPLAIRNNFILPIGSLESAQLISAHAGERR 118

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L +D+G  RLG+   +AL+        +      + +H   A       +  Q+E
Sbjct: 119 -VFCHLVIDSGMGRLGIPAAQALEEFAEIAKLEKLHFDGVYTHFPVAYSDR-EFSLQQIE 176

Query: 181 RFRTLISHYKG--IEASLASSSGILLGPNYH---FQLTRPGISLYGGTD-KINKSHPMQT 234
            F+  ++          +A+S GI   P      F   R G++LYG  D +  +   ++ 
Sbjct: 177 AFKDFLNQCPHTFKRIHIANSDGIHNIPEACQAPFNFVRTGLNLYGCFDLEGAQRVQLEP 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++T  +R++ +R+  AG  + YG +  L + +L+   A+GYADG+P              
Sbjct: 237 ILTLASRLVRVRELNAGMSIGYGREWLLEKTTLVGTVALGYADGFPFN------------ 284

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                   +G+  P++G+I+MD    D++   + + GD +   G  I +   A   GT  
Sbjct: 285 -TKAYVLYQGHKCPVIGRISMDYITIDLSQCPNAKSGDAVLCLGDAIPVAKWAKWKGTIT 343

Query: 355 YDLLVRIGTRYAKFY 369
           Y+++  +G R  + Y
Sbjct: 344 YEIICSLGQRIKRIY 358


>gi|124268746|ref|YP_001022750.1| alanine racemase [Methylibium petroleiphilum PM1]
 gi|166969417|sp|A2SLS6|ALR_METPP RecName: Full=Alanine racemase
 gi|124261521|gb|ABM96515.1| Alanine racemase [Methylibium petroleiphilum PM1]
          Length = 367

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 86/374 (22%), Positives = 141/374 (37%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N     A   +AR  AVVK +AYG G  ++  AL       F +  
Sbjct: 3   RPIEALIHAEALTHNLARARAAVPDARVWAVVKAHAYGHGIARVFEALRA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  +LR    +  I +L G+  P   ++    NL   +    Q+ + +        H 
Sbjct: 61  LAEAQQLRDLGWRGPILLLEGVFEPRDLELCSRLNLWHTVHCEAQIDWLAMHK-THQPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG                       ++SH + AD       ++Q+  F 
Sbjct: 120 VFLKMNSGMNRLGFRPAAFRAAWTRLHALPQVDEISLMSHFSDADGGRGIAAAMQV--FD 177

Query: 184 TLISHYKGIEASLASSSGILLGPNY--HFQLTRPGISLYGGTDKINKSHPMQTV----VT 237
                  G  +   S++ +  G +        R GI LYG                  +T
Sbjct: 178 DATRDLPGERSLCNSAATLRHGADAAVRADWVRAGIMLYGSAPDFPSHDIAHWDLQPTMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             AR+I  +   AG+ V YG +        I V A GYADGYP                G
Sbjct: 238 LRARLIGTQDLQAGDTVGYGSRFTAEAPMRIGVVACGYADGYPRHA-----------PSG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G    ++G+++MDM   D+        G  + ++G       + +D+VA A+GT
Sbjct: 287 TPVLVDGVRTRLVGRVSMDMVTVDLGGLPQAARGSEVTLWGRASSGAVLPIDEVAHAAGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+ +  +  R  
Sbjct: 347 VGYEPMCALAARVP 360


>gi|108563349|ref|YP_627665.1| alanine racemase, biosynthetic [Helicobacter pylori HPAG1]
 gi|123373729|sp|Q1CST1|ALR_HELPH RecName: Full=Alanine racemase
 gi|107837122|gb|ABF84991.1| alanine racemase, biosynthetic [Helicobacter pylori HPAG1]
          Length = 377

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNANASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEIEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSARANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIAYETISTLSKRLERVY 376


>gi|311114795|ref|YP_003986016.1| alanine racemase [Gardnerella vaginalis ATCC 14019]
 gi|310946289|gb|ADP38993.1| alanine racemase [Gardnerella vaginalis ATCC 14019]
          Length = 451

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 102/406 (25%), Positives = 165/406 (40%), Gaps = 44/406 (10%)

Query: 8   RLKIDLTALKNNWHSM-----NALSGNAR---TAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++ +DL AL++N  ++       L    +      VVK +AYG G    A A    G   
Sbjct: 25  QVIVDLKALRDNMRTLIERVSKDLQPGQKSPAVMGVVKADAYGHGLIPSALAALAGGATW 84

Query: 60  FFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
                  E ++LR      +R  +L  +      +  D     +  SV  L     +   
Sbjct: 85  LGTAQPYEALRLRACGIDSSRCRILTWLTSAPTSLFADLINADIDISVGSLDSIDAVALA 144

Query: 119 GVS----HPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPS 171
             S        ++VDTGF R G +     +AL+      ++ L ++    SHLA AD P 
Sbjct: 145 AKSVGAAARIHVKVDTGFGRNGFTPAGFSDALEKLSEYSSQGLIEVIGQWSHLAVADCPD 204

Query: 172 SH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
                     Q+E+F                  LA+++  L  P   F+L RPGI LYG 
Sbjct: 205 VPEFVSSTDRQIEQFHDFTRRMCEAGLEPKIRHLANTAATLNRPEIRFELVRPGIGLYGY 264

Query: 223 TDKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                   P        +T +A++  ++   AG  +SYG       ++  A+  +GYADG
Sbjct: 265 EPDPVMGVPQTYDLRPAMTLQAQLGTVKSVEAGHGISYGRTYLTPDNTSTAIVPLGYADG 324

Query: 279 YPLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDI---TDSLSIEV 330
                SG D + S  V   GG   +    G   + + G++ MD  + D+      L ++ 
Sbjct: 325 ILRAASGYDMQGSRHVNKPGGPVRVETNNGARILHVSGRVCMDQFIVDLKGSAKELGVKE 384

Query: 331 GDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           GD +++FGP       +   DD A A+GT +Y+++  IG R  + Y
Sbjct: 385 GDTVRLFGPGRGIEYAEPTADDWAAAAGTISYEIMTGIGPRVPRLY 430


>gi|15611943|ref|NP_223594.1| alanine racemase [Helicobacter pylori J99]
 gi|9789719|sp|Q9ZKQ9|ALR_HELPJ RecName: Full=Alanine racemase
 gi|4155452|gb|AAD06456.1| ALANINE RACEMASE [Helicobacter pylori J99]
          Length = 377

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 165/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N++++  +   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTHSLRHNFNAVKNIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  Q  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFSQTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADSNIKTHAKNQMKVFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG           QT++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESSQTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +ARI+ I++   GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKARIVQIKRVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-EAKEGDEVILFGDKSTKANDASEIAT 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|71907615|ref|YP_285202.1| alanine racemase region [Dechloromonas aromatica RCB]
 gi|71847236|gb|AAZ46732.1| Alanine racemase region [Dechloromonas aromatica RCB]
          Length = 370

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 105/367 (28%), Positives = 158/367 (43%), Gaps = 24/367 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M ++  +R +I   A+ +N+      +  ++  AV+K NAYG G  +   AL       F
Sbjct: 1   MKTSRPIRARIAPAAILHNYRLAKRHAPQSKAWAVIKANAYGHGQWRAVDALRGE-ADGF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            +   E  V LR       I +L GI      + + +  L  VI  + QL    +     
Sbjct: 60  ALLECENAVALREAGVTQPILMLEGIFSARDVRAVIEYRLTSVIHCLEQLELLVRNGRFD 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+++TG NRLG +    L        +       +++H A AD       + QL
Sbjct: 120 TPISVCLKLNTGMNRLGFTAA-TLPRAWEILQQLPQVDVTLMTHFADADGERG--VTWQL 176

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           ERF  L   + G   SL +S+ IL  P  H    RPGI LYG +   ++      ++ V+
Sbjct: 177 ERFHDLAGDWAG-PVSLGNSAAILSHPKAHGDWVRPGIMLYGASPFADQSAVDLGLRPVM 235

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E+ +I I+   AGE V YGG     R   I V A GYADGYP                
Sbjct: 236 TLESAVIGIQDLAAGERVGYGGTFTADRPMRIGVVACGYADGYPRHA-----------PT 284

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI----KLDDVALASGT 352
           G    + G     +G+++MDM   D+TD     +G  + ++G  I      D+VA A+GT
Sbjct: 285 GTPIAVMGRRTRTIGRVSMDMLACDLTDVPEAGIGSPVTLWGLGIAGAVPADEVAAAAGT 344

Query: 353 TNYDLLV 359
             Y+L  
Sbjct: 345 VAYELFC 351


>gi|308063768|gb|ADO05655.1| alanine racemase [Helicobacter pylori Sat464]
          Length = 377

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 157/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++L  +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELCSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLSNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|152997631|ref|YP_001342466.1| alanine racemase [Marinomonas sp. MWYL1]
 gi|189027389|sp|A6W1F2|ALR_MARMS RecName: Full=Alanine racemase
 gi|150838555|gb|ABR72531.1| alanine racemase [Marinomonas sp. MWYL1]
          Length = 365

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 163/371 (43%), Gaps = 21/371 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L   +DL A+  N+     L    +  AVVK NAYG G  +++  L    V  F V +
Sbjct: 3   RPLTATVDLEAILQNYRYAKKLQPTCKAFAVVKSNAYGHGAVEVSRYLDKE-VDAFAVAA 61

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE + LR     + I +L G+  G+E  + + +         Q        S       
Sbjct: 62  IEEAIALREAGIVSPILLLEGVFEGEEWALCEKHGFWSALENAQQLD-ELQASHAKIEKV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++D+G +RLG+  + A  F     +       ++++H +CADD S      QL  F  
Sbjct: 121 FLKLDSGMHRLGVDKETAPVFVSALKDSGQVGEVVLMTHFSCADDLSDLTTMQQLAYFEQ 180

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEAR 241
                  IEAS+A+S+ I+          RPGI LYG +       +S  ++  +T  ++
Sbjct: 181 ARQSIGEIEASVANSATIMKWSVPEGGWIRPGIMLYGISPFAEVSGRSIGLRPAMTLSSK 240

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I  RK   G+ V YG       D ++A  A+GY DGYP                G    
Sbjct: 241 VISTRKLKQGDKVGYGLGYVAAEDHVLATVAVGYGDGYPRHAVN-----------GTPLK 289

Query: 302 IKGYMVPILGKITMDMTMF---DITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           I G    + G+++MDM      D+ D     +G  + ++G D+ +++VA  +GT  Y+L+
Sbjct: 290 IDGKPASLAGRVSMDMITVRMQDLADEP--AMGQDVVLWGGDVPVEEVADYAGTIGYELV 347

Query: 359 VRIGTRYAKFY 369
            R+ +R    Y
Sbjct: 348 TRMTSRPHYRY 358


>gi|289548107|ref|YP_003473095.1| alanine racemase [Thermocrinis albus DSM 14484]
 gi|289181724|gb|ADC88968.1| alanine racemase [Thermocrinis albus DSM 14484]
          Length = 337

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 116/362 (32%), Positives = 175/362 (48%), Gaps = 31/362 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSVEE 67
           L+I+  AL  N   +N  +G  +  AVVK NAYG+G   IA  L     V  F V  VEE
Sbjct: 5   LEINRDALLQNVKRINTFTGK-KLIAVVKANAYGVGATLIASLLEPLEEVAAFAVACVEE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV+LR    +  I VL G+ P + + +   NL PV+S    L         G    + ++
Sbjct: 64  GVELREAGVKKPILVLGGVLPEELEELVRWNLTPVVSHPSHLKALE-----GSFVKFHVK 118

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            DTG  RLG   +          ++++  +   +SH A            Q+E FR ++S
Sbjct: 119 YDTGMGRLGFLEE-------IIQDRRVEGVMTHLSHPA-----DRSFTLKQIETFRKIVS 166

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           HY+G++     SS  L+    +    R G++LYG     +    +   ++ +ARII ++ 
Sbjct: 167 HYRGVKWVHLESSAGLIYRVDYATHVRVGLALYGEKPLSSYPIELSPALSLKARIISVKV 226

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AG  VSYG    L RD+ + V AIGYADG   +LSG             + + +G  V
Sbjct: 227 LPAGHRVSYGDSCVLKRDTRVGVVAIGYADGLLKSLSG-----------KARFYYRGVPV 275

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P+LG ITMDMTM D++     EVGD+++I GP      +A  +GT  Y+L+  +  R  +
Sbjct: 276 PLLGNITMDMTMVDLSSV-EAEVGDWVEIVGPHQSFTQLAKEAGTIPYELMSLLSRRVHR 334

Query: 368 FY 369
            +
Sbjct: 335 VF 336


>gi|148657090|ref|YP_001277295.1| alanine racemase [Roseiflexus sp. RS-1]
 gi|148569200|gb|ABQ91345.1| alanine racemase [Roseiflexus sp. RS-1]
          Length = 844

 Score =  238 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 98/375 (26%), Positives = 156/375 (41%), Gaps = 24/375 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    ++IDL A+++N  ++ +++G     AV+K +AYG G  + A A    G     V 
Sbjct: 479 DRPTWVRIDLDAIRDNVRTLRSIAG-VPVMAVLKADAYGHGAVRAARAALAGGAVALAVA 537

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++ E   LR     A I  L    P Q        +   +         + +   GV  P
Sbjct: 538 TLGEARTLREAGIGAPILALGYTPPWQVAQAARLGVAITVFDYDAARACAAVAETGVPVP 597

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VDTG  R GLS+ E   F  +        +  + +H A AD         QL RFR
Sbjct: 598 VHVEVDTGMARTGLSVDELGPFLRSLAGLPGVHVEGLYTHFADADAADPGAAEAQLRRFR 657

Query: 184 TLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVV 236
           + +    G          A+S+ +L  P   F + RPGI+ YG       + P   +  +
Sbjct: 658 SALDAVTGAGLRPPVVHAANSAAMLRLPGARFDMVRPGIACYGLAPSPWVTLPAALRPAL 717

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +  + +  +R    G  VSYGG     R S IA   +GYADG                  
Sbjct: 718 SFHSEVAQVRDLPPGTPVSYGGTFVTRRHSRIATIPVGYADGMRRAPPWR---------- 767

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  ++G   P++G+I MD  M D+TD   +  GD + + G      I + +VA   GT
Sbjct: 768 --EVLVRGRRAPVVGRICMDYAMIDVTDHAEVRRGDLVTLIGVQGDACITVAEVASWLGT 825

Query: 353 TNYDLLVRIGTRYAK 367
            +YD++  I  R  +
Sbjct: 826 ISYDVVATILPRVPR 840


>gi|326576906|gb|EGE26812.1| alanine racemase [Moraxella catarrhalis O35E]
          Length = 380

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 37/379 (9%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + I   AL +N   +   L    +  A+VK +AYG G +   PAL +     F V  + E
Sbjct: 6   ITIHPNALTHNLQIIKSQLDPTTKVLAMVKADAYGHGIDATVPALIH--ADGFGVACLSE 63

Query: 68  GVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            + ++         +  + +       + K+  D +   +I    QL +    +      
Sbjct: 64  AMAVKQVLDGMNHKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLIWALSHRPKQDQF 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S  +N+ Q+ 
Sbjct: 124 CHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSHPLNAQQIS 181

Query: 181 RFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           +F   ++  +         L +S+GI    + H    R GI+LYG     +   K+  + 
Sbjct: 182 KFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQSAKALNLM 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP             
Sbjct: 242 PAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR------------ 289

Query: 294 VFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
           V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G    +D+VA+
Sbjct: 290 VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDSPTIDEVAM 348

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            +GT  Y+L+ R+ TR  +
Sbjct: 349 CAGTIGYELMCRLTTRPKR 367


>gi|300932943|ref|ZP_07148199.1| hypothetical protein CresD4_02686 [Corynebacterium resistens DSM
           45100]
          Length = 559

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 95/387 (24%), Positives = 155/387 (40%), Gaps = 35/387 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +    + IDL+A+++N       + +A   AVVK +AY  G   +A A   +G     V 
Sbjct: 11  HALAEVIIDLSAVRSNVSLFADAAPSAEVMAVVKADAYNHGAFSVARACLESGATQLGVA 70

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT-------FYSKLM 116
           ++ E + LR     A I     I           ++   + S+              +  
Sbjct: 71  TIGEALSLRTAGITAPITAWMWIPGEDLSRAIQQDITIGVPSLAHAEALVELVDTLEQSD 130

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL--ACADDPSSHV 174
           S       +L  DTG +R G++  +                   +     +  D   +  
Sbjct: 131 SNSTPIAISLMADTGLSRSGITPDQWATVVELIAKYSASFDVRGVMSHLASADDSARAAF 190

Query: 175 NSVQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
             VQ  RF+  I      GI+     +A++   L  P+ H Q+ RPG+ +YG    +  S
Sbjct: 191 TDVQNRRFQRAIEICREHGIDPRTNHIANTPAALTRPDLHHQMVRPGVGIYGIDPVVGGS 250

Query: 230 HPM----QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                  +  +T  A++I  +   AGE VSYGG    TRD+  AV A GYADG P   SG
Sbjct: 251 GGNAGQLRPAITFRAKVITTKTIRAGESVSYGGTWTATRDTRTAVVAAGYADGVPRAASG 310

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL---SIEVGDYIQIFGP-DI 341
                           I G + P +G++ MD  + ++ DS     ++ GD+  IFG   I
Sbjct: 311 KF-----------HVGIGGKLYPQIGRVCMDQIVVNLGDSEEPTDVKPGDWATIFGEGGI 359

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKF 368
              ++A A+ T +Y++L     R  + 
Sbjct: 360 SASELAAAAETIDYEILTM--PRGPRV 384


>gi|88803788|ref|ZP_01119311.1| alanine racemase [Polaribacter irgensii 23-P]
 gi|88780316|gb|EAR11498.1| alanine racemase [Polaribacter irgensii 23-P]
          Length = 366

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 100/376 (26%), Positives = 149/376 (39%), Gaps = 23/376 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+++  + L+ID  AL +N       L    +  AVVK   YG    ++A  L    V  
Sbjct: 1   MNTHVTI-LEIDGKALVHNLDYFKEKLQTTTKILAVVKAFGYGSDGAQVAKFL-EHKVDY 58

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V    EGV LR    Q  I VL+       ++I D  L P + +      + K+    
Sbjct: 59  FAVAYTHEGVALREAGVQTPILVLHPHL-QNLEVIIDFKLEPGLYNFKIFNAFLKVAKEK 117

Query: 120 VSH--PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
            S   P  L+ +TG NRLG S  E              ++  + SHLA ++D       +
Sbjct: 118 GSAQYPIHLKFNTGLNRLGFSATEIPTILTQLHASTAVKVQSLFSHLAASEDLEEKAFTT 177

Query: 177 VQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            Q+E+F  +               L ++SG++  P   F + R GI LYG  +   ++  
Sbjct: 178 GQIEQFTAIKEELFAGLKYTPMLHLLNTSGVVNYPKAQFDMVRIGIGLYGFGNDAKETVH 237

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++     ++ I  I    AGE V Y         +  A   IG+ADG    L        
Sbjct: 238 LKNTHNLKSIISQIHTIAAGETVGYNRAFAAKATTKTATIPIGHADGLSRRLGNT----- 292

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
                 G   I     PI+G + MDM M D+T       GD + +F     +  +A  SG
Sbjct: 293 -----KGFVRINQQNAPIIGNVCMDMIMVDVTHI-DCSEGDEVIVFNTQEMIQHIATTSG 346

Query: 352 TTNYDLLVRIGTRYAK 367
           T  Y+ L  I  R  K
Sbjct: 347 TIVYETLTAISPRVHK 362


>gi|118602666|ref|YP_903881.1| alanine racemase [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
 gi|118567605|gb|ABL02410.1| alanine racemase [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 350

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 19/358 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             I  +ALK+N   +   S N R  ++VK NAYG   + I P + ++      V+ + E 
Sbjct: 5   ASISQSALKHNLSVVKKNSLNTRIVSMVKANAYGHHIDLIDPIINHS--DLLGVSEILEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KLR  T Q  + +   I   + +     N   V+    Q    S + +   +    +++
Sbjct: 63  EKLRKTTNQPILLLSGVIKDQELQQAIKLNCQIVVHDKTQ---LSVVNNTKQAIDIWIKI 119

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NRLGLS  E         N  L  +  I+SH ACAD+ +  +N  QL  F+  ++ 
Sbjct: 120 NTGMNRLGLSTNEYNHCIKLLGNNPLINIQCIMSHFACADEINHPMNQSQLFEFKK-LTD 178

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
               + S+A+S+ IL     HF   RPGI LYG +     +H ++ V+   A I+ I+  
Sbjct: 179 PVVAKRSMANSAAILSNSASHFDYVRPGIMLYGVSPFNIINHNLKPVMQLSAPIMSIKTI 238

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            A + V YG      + + IA   IGY DGYP                G    I   + P
Sbjct: 239 KADDSVGYGVTWTADKSTAIATIGIGYGDGYPRHAKN-----------GTPVLINNTLCP 287

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLLVRIGTRY 365
           ++G+++MD+   DI++  +  VGD   ++G   ++++ +A  S T  Y+LL  I +R 
Sbjct: 288 LVGRVSMDLICVDISNI-NASVGDNAILWGNKQLRIETIAKHSATIAYELLAGISSRV 344


>gi|294054687|ref|YP_003548345.1| alanine racemase [Coraliomargarita akajimensis DSM 45221]
 gi|293614020|gb|ADE54175.1| alanine racemase [Coraliomargarita akajimensis DSM 45221]
          Length = 378

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 94/384 (24%), Positives = 157/384 (40%), Gaps = 27/384 (7%)

Query: 1   MHSNEF---LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M ++        +IDL A + N   + A L  + R  +VVK +AYG G   +   L  +G
Sbjct: 1   MSAHPPDQRCWAEIDLAAFERNVRRIQAELPSDVRYVSVVKADAYGHGMPHMVRRLMQSG 60

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
           V  F V +V E  ++R       I +L  + P ++  + + +L   IS+  +    ++L 
Sbjct: 61  VDCFAVANVAEAAEIRHMGSGWPILILSPVLPYEQAKLLEYDLSATISTETEAHTLNELA 120

Query: 117 -SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                +    L++DTG  RLG+  + A     +       +L  I +H + AD       
Sbjct: 121 KRKNSTLKVHLKIDTGMGRLGVWYESARALFDSLQAYPHLKLEGIYTHFSSADSDP-TFT 179

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGP---NYHFQLTRPGISLYGGTDKINK---S 229
            +Q +R    +      +  + + +   L        F   R G+   G          S
Sbjct: 180 QLQRQRLLDFLEQVPIDDLLIHADNSASLESLSGQSPFNAVRVGLLQLGIPPYPQSLLGS 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V +   RI LI++   G  +SY     L R + I +   GY DG PLTLS     
Sbjct: 240 IHVEPVFSFHTRIGLIKELPPGTDISYSRTYTLNRTTRIGILTAGYGDGIPLTLSNR--- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                   G+  I G   PILG++TMD T+ D++ +    VGD   + G      I   +
Sbjct: 297 --------GEVLIHGRRCPILGRVTMDQTIVDLSGATDARVGDIATLIGQHGDETISAAE 348

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            +  + T  ++ L  I  R  + Y
Sbjct: 349 FSQTAETIPWETLCSITKRVTRTY 372


>gi|317012750|gb|ADU83358.1| alanine racemase [Helicobacter pylori Lithuania75]
          Length = 377

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 164/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASETFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR + P+  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFPKTPILILGYSPNANASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRVLKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIAYETISTLSKRLERVY 376


>gi|299144129|ref|ZP_07037209.1| alanine racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518614|gb|EFI42353.1| alanine racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 387

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/386 (21%), Positives = 148/386 (38%), Gaps = 31/386 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M+      L+I+L  L  N + +      +A   +VVK NAYG G  KI   L   G+  
Sbjct: 1   MNLTRPAWLEINLDYLIENINKIRNNVREDAEIISVVKSNAYGFGALKIVEILRENGINF 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
           F V ++ E + +R      ++ +L         +  + N+   I +       +++    
Sbjct: 61  FAVATMSEAIAIRKKFKDVKLLILGYTPDYLMNVAVENNITLAIYNYESARTLNEIAKSQ 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
             +    + +DTG NR+G    +         +K        +     A D ++     Q
Sbjct: 121 NKTATIHIALDTGMNRIGFKNIDDSIEDIKKISKFKNIYIEGVFSHFAAADTNAEYTKRQ 180

Query: 179 LERFRTLI----SHYKGIEA-SLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKS 229
              F+ +      +   I    + +SS IL    Y     RPGI  YG T+    K  + 
Sbjct: 181 FNIFKNVTDILEKNKINIPIKHINNSSAILNYNEYSLDAVRPGIIQYGSTEGIKTKYKEL 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
           + ++ +   +A++  ++    GE VSYG   + + ++ IA   +GY+DG    LSG    
Sbjct: 241 NNVKYIGQIKAQVSNVKIVSKGEKVSYGLTYETSTETKIATIPLGYSDGILRQLSGKID- 299

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDD 345
                       + G     +G+I MD  M D++      +GD + I G      I + +
Sbjct: 300 ----------VLVSGKRCRQIGRICMDQMMVDVSGV-DCNIGDEVVILGSQGNEYIDILE 348

Query: 346 VALASGTT--NYDLLVRIGTRYAKFY 369
           +A        +Y        R  K Y
Sbjct: 349 IARKVDEIATSYS--CHFSPRLPKVY 372


>gi|94986479|ref|YP_594412.1| alanine racemase, catabolic [Lawsonia intracellularis PHE/MN1-00]
 gi|166969415|sp|Q1MSD5|ALR_LAWIP RecName: Full=Alanine racemase
 gi|94730728|emb|CAJ54090.1| alanine racemase, catabolic [Lawsonia intracellularis PHE/MN1-00]
          Length = 380

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 169/374 (45%), Gaps = 32/374 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +KI L  L+ N   + +   N     V+K NAYG G   +A  L + GVQ   V S+ EG
Sbjct: 8   IKIHLERLRYNLRILRSRYPN--VMPVIKANAYGHGIRVVANVLRDEGVQHMAVGSITEG 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNL----IPVISSVPQLTFYSKLMSCGVSHPY 124
             LR    QA +  L G    ++  I   +     I  I S+  +  YS++   G + P 
Sbjct: 66  FLLRQEGHQAFLLALLGPFSEEDARIAVVHNITPVIHNIESLQSIVHYSRVHQGGTAVPV 125

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERF- 182
           A+++DTG  RLG S  + +       +       L++SHL   +     +V   Q+E+F 
Sbjct: 126 AIKIDTGMGRLGFSSNDYISLIDLLRHTPEVNPILLLSHLVAPEISSLDNVTHNQVEQFA 185

Query: 183 ---RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-----HPMQT 234
              + +   +  I+ SL +S G+L  PNY    +RPGI+LYGG      S          
Sbjct: 186 RAYKAIKEAFPTIKTSLTNSPGLLAWPNYIGDFSRPGIALYGGNPFYGTSRVSLGKGFLP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  EA ++ I    AG  + YG       D  +AV   GYADGY  + S          
Sbjct: 246 VMEVEAPVVAINTVSAGSSIGYGCTYYAKEDIRVAVIGAGYADGYSRSFSN--------- 296

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPD----IKLDDVALA 349
              G   IKG    I+G++ M M M DIT+S S I +GD   + G      IK +++A  
Sbjct: 297 --KGWVVIKGKRYRIVGRVCMQMLMVDITNSHSKISIGDKAFLLGGGGSLAIKPEELAEW 354

Query: 350 SGTTNYDLLVRIGT 363
            GT  +++   +G+
Sbjct: 355 WGTIPHEVCCSLGS 368


>gi|291287316|ref|YP_003504132.1| alanine racemase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884476|gb|ADD68176.1| alanine racemase [Denitrovibrio acetiphilus DSM 12809]
          Length = 361

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 98/369 (26%), Positives = 152/369 (41%), Gaps = 22/369 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLG-CEKIAPALYNAGVQDFFVT 63
                +IDL A   N  +   LSG     A+VK +AY  G  E    A        F V 
Sbjct: 9   RPTYAEIDLRAFGKNIETARELSG-TDIIAIVKADAYSHGELEMCGYAYQKHNCTKFAVA 67

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPG--QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           ++ E + LR +  +     + G       E+      +  +  +     +   L    + 
Sbjct: 68  TILEAIILREHLGEGVSIFVLGYIDETFYEEAYEHNIIFTINDNDTATKYNEFLQRKNLH 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               ++++TG NRLG      + +   S      +   I+SHL+ AD         Q+E 
Sbjct: 128 ANVTVKINTGMNRLGFRTD--MSWYEFSSAYPALRPIHIMSHLSSADTDR-EYTYNQIEE 184

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F   I+  K    +   +S  + G    F LTRPGI LYG  D       ++ V+   +R
Sbjct: 185 FHNFIAKNKIRCHTSLLNSSGIAGYENKFSLTRPGIMLYGYLD-GGYDVKLEKVMRIYSR 243

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ I+    G+ VSY  +    R+  I V  IGYADGYP  LS                F
Sbjct: 244 IVQIQYLRKGDAVSYSRKFHADRNMAIGVVPIGYADGYPRCLSNKS-----------HVF 292

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGD-YIQIFGPDIKLDDVALASGTTNYDLLVR 360
           + G   P++G + MDM M D+T       G   +++ G  I  D++A  +GT +Y++L  
Sbjct: 293 VDGIKCPVIGNVCMDMMMVDLTGVNL--NGSLKVEVLGDSIDADELAEMAGTISYEILTG 350

Query: 361 IGTRYAKFY 369
           I  R  + Y
Sbjct: 351 IQNRIPRIY 359


>gi|205354317|ref|YP_002228118.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|205274098|emb|CAR39107.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|326629441|gb|EGE35784.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 358

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 104/360 (28%), Positives = 166/360 (46%), Gaps = 25/360 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P    +     + P+++SV Q + + +   +     P  +Q+
Sbjct: 76  LRKILSADAMVVLLNGVMPQAMPLCCAQQITPLLNSVDQVMAWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RL    ++      +            ISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLAAIFRQRGWAAPDYI----------ISHLANADRPDHALNVYQHTLLQQAKEA 185

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 186 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLSILRVQDV 244

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G  + YG     TR   IA  + GYADG P  L                   +G  +P
Sbjct: 245 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPPAGVCWRGVRLP 293

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +LG++ MD  M D    +    GD ++  G    L++VA A  T  Y+++ R+G R+ + 
Sbjct: 294 VLGRVCMDSFMVDARAIMP-TPGDVVEFIGVSQTLEEVAAACDTIPYEIMTRLGGRFRRI 352


>gi|317009599|gb|ADU80179.1| alanine racemase [Helicobacter pylori India7]
          Length = 377

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N++++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFNAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSTMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH-----YKGIEASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +        +       +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLEQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD   +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEAILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|258543958|ref|ZP_05704192.1| alanine racemase, biosynthetic [Cardiobacterium hominis ATCC 15826]
 gi|258520804|gb|EEV89663.1| alanine racemase, biosynthetic [Cardiobacterium hominis ATCC 15826]
          Length = 365

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 89/359 (24%), Positives = 163/359 (45%), Gaps = 22/359 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID+ AL++N   +   +G A+  AVVK +AYG G   + PAL +  V  F V S++E ++
Sbjct: 18  IDVAALRHNVRVLRQQAGAAKLVAVVKADAYGHGVANVLPALTD--VDGFAVASMDEALQ 75

Query: 71  LRLYTPQARIFVLYGIHPGQEKI-IFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
           LR       + +L GI    E       + +P + S  QL +   +          ++VD
Sbjct: 76  LRQLGVGQPVLLLEGIFAADEAALCAQHDFVPCVHSPEQLAWLRGVDG----ISAWVKVD 131

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           +G +RLG +  +A  +     + +  +   + SH ACAD         QL R    ++  
Sbjct: 132 SGMHRLGFAAADAASWLPQVLSLQQVRWLGVASHFACADAEDLSDAQAQLARLDA-LALP 190

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIR 246
            G +  LA+S+ +   P    ++ R G++LYG +   +       ++ V++ + +++ +R
Sbjct: 191 AGWQRCLANSAALFALPEARGEVVRAGLALYGMSPFADGDAARLGLRPVLSLQTQVLAVR 250

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +  AG+   Y    +      +A  A+GY DG+P  +          V    +  + G  
Sbjct: 251 RLQAGDFAGYSHGFQAQVAGNLATIALGYGDGFPRAI----------VSGAVQLLLNGKR 300

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            P++G++ MDM +  + +  +  VGD + +FG     + VA  + T  Y L   +  R 
Sbjct: 301 YPLVGRVAMDMALLWLGED-TAAVGDAVLVFGEGNPAERVAAQAATIPYTLTTMLTARV 358


>gi|146328630|ref|YP_001209245.1| alanine racemase [Dichelobacter nodosus VCS1703A]
 gi|166967412|sp|A5EW54|ALR_DICNV RecName: Full=Alanine racemase
 gi|146232100|gb|ABQ13078.1| alanine racemase [Dichelobacter nodosus VCS1703A]
          Length = 357

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 92/360 (25%), Positives = 151/360 (41%), Gaps = 20/360 (5%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+L AL++NW  +   S  A    V+K +AYG G   +A  L +   + F V+ +EE + 
Sbjct: 8   INLNALRHNWALIKQRSLPATPMVVLKADAYGHGMTTVAKTLDD--ARYFAVSCIEEAIA 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           LR       + +L G++   E ++ +      +  V        L     S    L+VD+
Sbjct: 66  LRHLGIDTPVVLLEGVYRADELLLCEYYQFDTL--VHNFRQMQWLKEFNGSVKAWLKVDS 123

Query: 131 GFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY 189
           G +RLG +  E A  F          Q   +I+H AC+D+        QL     L+   
Sbjct: 124 GMHRLGFTQDEIAEAFAQAHSLPVNIQWQGVITHFACSDEDDLTHAKKQLACMDRLVLPA 183

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIR 246
                   +S+ I   P  H+  TR GI LYG +  ++     + +Q V+T    I+ +R
Sbjct: 184 HWKRCYA-NSAAIFALPQAHYDYTRSGIMLYGLSPFMHGDGSAYGLQPVMTVITEILAVR 242

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
                E   YG          +A  A+GY DG+  T++                 I G  
Sbjct: 243 HLEKNETAGYGQGFTAPESGWLATIALGYGDGFARTITSGAV----------PVLIAGQR 292

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            P++G++ MDM M  +      E G  +++FG  +  ++VA A+GT  + L   +  R  
Sbjct: 293 YPLVGRVAMDMAMVWLGSDRYAE-GTIVELFGSHLPTEEVARAAGTIPHTLTTMLMPRVH 351


>gi|332673780|gb|AEE70597.1| alanine racemase [Helicobacter pylori 83]
          Length = 377

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 159/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNSASLRHNFSAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLEQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSSGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG           +A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASGIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|237743978|ref|ZP_04574459.1| alanine racemase [Fusobacterium sp. 7_1]
 gi|229433009|gb|EEO43221.1| alanine racemase [Fusobacterium sp. 7_1]
          Length = 354

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 103/373 (27%), Positives = 166/373 (44%), Gaps = 32/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +I   L   GV  F V ++
Sbjct: 2   RTWVEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSVEITKILQEIGVNFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L++  ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQ---LQFLVNNKLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  I SHL+ +D+    + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAKKVIEFCKNNNL-NLVGIFSHLSDSDENTVETKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           + +++        +++S+GI     +    L R GI +Y  T    K+  ++ + T ++R
Sbjct: 178 KKIVNSLNLKYIHISNSAGITNFQNDIVGNLVRMGIGMYSFTGN-KKTPYLKNIFTIKSR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I+K      VSYG    L  DS  AV  IGYADG    LS            GG   
Sbjct: 237 VLFIKKVKKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGYVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----Y 355
           I  +   I+G I MDMTM  I   +   +++GD + +   DI LD++            +
Sbjct: 286 INNHRCEIIGNICMDMTMIRIPKEVENSVKIGDEVTVINADI-LDNLN-----IPELCVW 339

Query: 356 DLLVRIGTRYAKF 368
           + +  IG R  + 
Sbjct: 340 EFMTGIGKRVKRI 352


>gi|326575825|gb|EGE25748.1| alanine racemase [Moraxella catarrhalis CO72]
          Length = 380

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 164/379 (43%), Gaps = 37/379 (9%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + I   AL +N   +   L    +  A+VK +AYG G +   P L +     F V  + E
Sbjct: 6   ITIHPNALTHNLQIIKSQLDPTTKVLAMVKADAYGHGIDATVPVLIH--ADGFGVACLSE 63

Query: 68  GVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            + ++         +  + +       + K+  D +   +I    QL +    +      
Sbjct: 64  AMAVKQVLDGMNHKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLIWALSHRPKQDQF 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S  +N+ Q+ 
Sbjct: 124 CHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSHPLNAQQIS 181

Query: 181 RFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           +F   ++  +         L +S+GI    + H    R GI+LYG     +   K+  + 
Sbjct: 182 KFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQSAKALNLM 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP             
Sbjct: 242 PAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR------------ 289

Query: 294 VFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
           V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G    +D+VA+
Sbjct: 290 VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDSPTIDEVAM 348

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            +GT  Y+L+ R+ TR  +
Sbjct: 349 CAGTIGYELMCRLTTRPKR 367


>gi|294339132|emb|CAZ87486.1| Alanine racemase, catabolic [Thiomonas sp. 3As]
          Length = 367

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 93/380 (24%), Positives = 153/380 (40%), Gaps = 32/380 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   AL +N   +   +  ++  AVVK NAYG G  +   AL       F +  
Sbjct: 3   RPISAVIHTAALSHNLLRVRQATPASKVWAVVKANAYGHGIARAYGALRT--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  KLR       I +L G   P    +    NL  V+    Q+ + +       +H 
Sbjct: 61  LTEAEKLRALGWVGPILLLEGCFAPEDLALCERLNLWHVVHCREQIDWLAVHRG-NRTHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+++TG NR+G S +                    ++H ACAD+         L RF 
Sbjct: 120 VFLKMNTGMNRVGFSPEAYAAAWERLNALPQVGEITHMTHFACADEAGG--IDEALARFA 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDK----INKSHPMQTVVT 237
             + H  G      S++ ++ G +        RPGI+LYG +            ++  ++
Sbjct: 178 RGVGHLPGERTLSNSAAALVHGADPRVASDWVRPGIALYGSSPTGLALDAAHWKLRPAMS 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I I+   AGE V YG +    R   I V A GYADGYP                G
Sbjct: 238 LRSELIDIQHIAAGECVGYGARFTAPRPMRIGVVACGYADGYPRVAPN-----------G 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIE----VGDYIQIFGPD----IKLDDVALA 349
               + G    ++G+++MDM   D+    +      +G  + ++G D    + +D+VA A
Sbjct: 287 TPIVVDGVRTQLVGRVSMDMITVDLEPVFAAGNQPMIGSPVLLWGQDAQAELSIDEVAAA 346

Query: 350 SGTTNYDLLVRIGTRYA-KF 368
           +GT  Y+L+  +  R   + 
Sbjct: 347 AGTLGYELMCALAARVPVRV 366


>gi|312602482|ref|YP_004022327.1| alanine racemase [Burkholderia rhizoxinica HKI 454]
 gi|312169796|emb|CBW76808.1| Alanine racemase (EC 5.1.1.1) [Burkholderia rhizoxinica HKI 454]
          Length = 356

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 90/346 (26%), Positives = 144/346 (41%), Gaps = 20/346 (5%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
              +  ++  AVVK NAYG G  ++ P L +     F +  +EE VKLR       I +L
Sbjct: 22  RRHASKSKLWAVVKANAYGHGLARVFPGLRS--TDGFGLLDLEEAVKLRELGWAGPILLL 79

Query: 84  YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEAL 143
            G     +  + D   +       +     ++          L++++G NRLG    +  
Sbjct: 80  EGFFRPTDIDVIDRYSLTTTVHCDEQLRMLEMARLSKPVNIQLKMNSGMNRLGYVAGKYR 139

Query: 144 DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGIL 203
                +          +++H + AD         QLE F        G   SLA+S+  L
Sbjct: 140 AAWERARACPSVGQITLMTHFSDADGEMGI--RHQLEVFEHGAEGIAG-SRSLANSAATL 196

Query: 204 LGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGGQ 259
             P  HF   RPGI LYG +        +   +Q  +T  + +I ++    G+ V YG  
Sbjct: 197 WHPYAHFDWVRPGIILYGASPSGVSAAIEGLGLQPAMTLSSELIAVQTVEPGDSVGYGSA 256

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
            K      I V A GYADGYP                G    + G    ++G+++MDM  
Sbjct: 257 FKARERMRIGVVACGYADGYPR-----------CAPEGTPVQVGGVRTRVVGRVSMDMLT 305

Query: 320 FDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
            D++   +  +G  +Q++G D+ +DDVA A GT  Y+L+  +  R 
Sbjct: 306 VDLSSCPNAVIGSPVQLWGADVPIDDVAAACGTVGYELMCAVAQRV 351


>gi|254304302|ref|ZP_04971660.1| alanine racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148324494|gb|EDK89744.1| alanine racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 354

 Score =  236 bits (602), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 105/373 (28%), Positives = 165/373 (44%), Gaps = 32/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L   GV+ F V ++
Sbjct: 2   RTWVEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSIEIAKILKEVGVKFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ QL F    ++  ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQLHFL---VTNKLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA           L  L  I SHL+ +D     +      Q+ +F
Sbjct: 119 LKFDTGMTRLGFEVDEAEKVIEFCKKNNL-NLVGIFSHLSDSDGNTMETKIFTLEQINKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           + +I+        +++S+GI    +     L R GI +Y  T    K+  ++ + T ++R
Sbjct: 178 KKIINSLNLEYVHISNSAGITNFHDDILGNLVRLGIGMYSFTGN-KKTPYLKNIFTIKSR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I+K      VSYG    L  DS  AV  IGYADG    LS            GG   
Sbjct: 237 VLFIKKVKKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGYVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----Y 355
           I  +   I+G I MDMTM  I   +   I++GD + +   DI LD++            +
Sbjct: 286 INNHRCEIIGNICMDMTMIRIPKEIENSIKIGDEVTVINADI-LDNLN-----IPELCVW 339

Query: 356 DLLVRIGTRYAKF 368
           + +  IG R  + 
Sbjct: 340 EFMTGIGKRVKRI 352


>gi|326315128|ref|YP_004232800.1| alanine racemase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371964|gb|ADX44233.1| alanine racemase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 369

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 96/380 (25%), Positives = 149/380 (39%), Gaps = 35/380 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R  I   AL+ N     A + +AR  AVVK NAYG G E+    L   G   F +  
Sbjct: 3   RPIRATIHTAALQQNLARARAATPDARVWAVVKANAYGHGIERAFEGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++    +L  V+    Q+ + S   +    H 
Sbjct: 61  LGEAERVRQLGWRGPILLLEGVFEPRDLELCSRLSLWHVVHCDEQIDWLSAHKTHA-PHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG                        ++H + AD P     + Q+E F 
Sbjct: 120 VFLKMNSGMNRLGFPPARYRAAWARLNALPQVDEISFMTHFSDADGPRG--IAHQIEAFC 177

Query: 184 TLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQT----V 235
           T      G E ++++S+  L              R GI LYG      +           
Sbjct: 178 TATQDLPG-ERTVSNSAATLRHAGGDARVRGDWVRAGIVLYGSAADHPEHTAAHWGLAPT 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  ARII  ++  AG+ V YG      R   I V A GYADGYP               
Sbjct: 237 MTLSARIIGTQQLQAGDTVGYGSSFTADRPLAIGVVACGYADGYPRHA-----------P 285

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL----SIEVGDYIQIFGPD-----IKLDDV 346
            G    + G     +G+++MDM   D++          VG    ++G       + +DDV
Sbjct: 286 TGTPVLVNGVRTRTVGRVSMDMITVDLSPLHEAGVEAGVGSEATLWGRASCGAVLCIDDV 345

Query: 347 ALASGTTNYDLLVRIGTRYA 366
           A  +GT  Y+L+  +  R  
Sbjct: 346 AQPAGTVGYELMCALAPRVP 365


>gi|256846795|ref|ZP_05552250.1| alanine racemase [Fusobacterium sp. 3_1_36A2]
 gi|256717761|gb|EEU31319.1| alanine racemase [Fusobacterium sp. 3_1_36A2]
          Length = 356

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 34/375 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L   GV+ F V ++
Sbjct: 2   RTWIEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSIEIAKILKEVGVKFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L+   ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQ---LQFLVDKNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAEKVIEFCKNNNL-NLVGIFSHLSDSDGNTVETKNFTLEQIEKF 177

Query: 183 RTLISH-YKGIEASLASSSGIL--LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +++     +E    S+S  +     +    L R GI +Y  T    K+  ++ + T +
Sbjct: 178 KKIVNSLNLNLEYIHISNSAGITNFHNDILGNLVRLGIGMYSFTGN-KKTSYLKNIFTIK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R++ I+K      VSYG    L  DS  AV  IGYADG    LS            GG 
Sbjct: 237 SRVLFIKKVNKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGY 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN--- 354
             I  +   I+G I MDMTM  I   +   I++GD + +   +I LD++           
Sbjct: 286 VLINNHRCEIIGNICMDMTMIRIPKEIENSIKIGDEVTVINANI-LDNLN-----IPELC 339

Query: 355 -YDLLVRIGTRYAKF 368
            ++ +  IG R  + 
Sbjct: 340 VWEFMTGIGKRVKRI 354


>gi|332798388|ref|YP_004459887.1| alanine racemase [Tepidanaerobacter sp. Re1]
 gi|332696123|gb|AEE90580.1| Alanine racemase [Tepidanaerobacter sp. Re1]
          Length = 380

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 78/342 (22%), Positives = 142/342 (41%), Gaps = 23/342 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+L  + +N +++  L GN    AVVK NAY     +++  +   G     V  +EEG
Sbjct: 10  LEINLDTIASNTNNIKRLIGNKELMAVVKGNAYTHDMIEVSKTVLKNGASRLGVGRLEEG 69

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYALQ 127
           + LR     A I  +     GQE+ I   ++   +  +  +   S        S    ++
Sbjct: 70  IYLRKAGITAPILNMCLNMEGQEREIVKYDIAQTVCDLDTVHRLSCEAAKMNKSAKIHVK 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI- 186
           +DTG  R+G+  ++AL+F       +  ++  + +H A   D      S QL+ F +++ 
Sbjct: 130 IDTGMGRIGIFPEDALNFISEVSAMQNIEIEGVYTHFATPHD--KEFMSYQLKLFSSVLK 187

Query: 187 ---SHYKGIEASLASSSGIL-LGPNYH--FQLTRPGISLYGGTDKINK--SHPMQTVVTA 238
                   I     +SS      P+    F + R G  +YG  +   +     +    T 
Sbjct: 188 RLNQEGYSIPLKHCASSEAFVAMPDTWEKFDMVRIGDLIYGVYNSEEEKDKIKVNFAQTF 247

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +  I+ ++K      + Y       +D++IA    GY DGY    S             G
Sbjct: 248 KTTIVFLKKLGPNTSIGYDRTYITDKDTIIATLPAGYNDGYTKLYSN-----------NG 296

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
              ++G   P++G++  D  M D+T+    +VGD + ++G  
Sbjct: 297 IVLVRGKKAPVVGRVCADQMMIDVTNIQDAKVGDEVVLWGRQ 338


>gi|188527764|ref|YP_001910451.1| alanine racemase, biosynthetic (alr) [Helicobacter pylori Shi470]
 gi|226711048|sp|B2UU89|ALR_HELPS RecName: Full=Alanine racemase
 gi|188144004|gb|ACD48421.1| alanine racemase, biosynthetic (alr) [Helicobacter pylori Shi470]
          Length = 377

 Score =  236 bits (601), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVNTASLRHNFSAVKSIVPKDAHIMAVVKANAYGVGAIKASEIFLQEGAHYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++L  +  +  I +L         ++ D +L  +I S+ Q   +S+            L
Sbjct: 68  ALELHSHFSKTPILILGYSPNSNASMLIDNDLSAMIFSLEQAEVFSQTALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIEASLA---------SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +               S      N    L RPGI LYG            T++
Sbjct: 188 LEQLSNQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|322633763|gb|EFY30503.1| alanine racemase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
          Length = 341

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 154/353 (43%), Gaps = 22/353 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGT 338


>gi|227499508|ref|ZP_03929615.1| possible alanine racemase [Anaerococcus tetradius ATCC 35098]
 gi|227218387|gb|EEI83638.1| possible alanine racemase [Anaerococcus tetradius ATCC 35098]
          Length = 373

 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 83/348 (23%), Positives = 139/348 (39%), Gaps = 26/348 (7%)

Query: 29  NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHP 88
           ++   AV+K NAYGLG   IA  +    V  F V S  E   LR    +  I +L  + P
Sbjct: 26  DSPICAVIKANAYGLGAVPIANYIEEY-VSYFAVASFNEAKVLRASNIKKPILILGYVSP 84

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN 148
            +  +    N+   I  +      +  +         + +DTG  RLG    E  D    
Sbjct: 85  EEAILSSKYNIEIPIYDLAYAKQINDKLDS--KLDVHIALDTGHGRLGFRPFEFEDIL-K 141

Query: 149 SFNKKLGQLSLIISHLACADDPSSHVNSVQ---LERFRTLISHYKGIEASLASSSGILLG 205
             + +   +    SH + AD+        Q      F+  +     IE    ++S   + 
Sbjct: 142 LKDLQNLHIKGAFSHFSTADEEDIEFTQRQNKIFNGFKKDLGREFDIENFHIANSAATIF 201

Query: 206 PNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKK 261
            N    + R GISLYG          K   +    + ++ +  ++    G  +SYG    
Sbjct: 202 HNIKGDMQRIGISLYGIYPSEYLLERKDVELSKAFSIKSVVSFVKNIEKGTSLSYGRSFI 261

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
             +D  IA  +IGYADG+    S             G+  I G +  + G++ MD  M D
Sbjct: 262 ADKDMKIATISIGYADGFFRAFSN-----------KGEVLINGKIAKVCGRVCMDQIMVD 310

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++   + +GD ++I+ PD+  +  A   GT  Y+L+  +  R  + Y
Sbjct: 311 VSNI-DVNIGDEVEIY-PDLYKE--ANKIGTIPYELMTALSLRVIRVY 354


>gi|314922758|gb|EFS86589.1| alanine racemase [Propionibacterium acnes HL001PA1]
 gi|314965676|gb|EFT09775.1| alanine racemase [Propionibacterium acnes HL082PA2]
 gi|315094626|gb|EFT66602.1| alanine racemase [Propionibacterium acnes HL060PA1]
 gi|315105345|gb|EFT77321.1| alanine racemase [Propionibacterium acnes HL050PA2]
 gi|327328857|gb|EGE70617.1| alanine racemase [Propionibacterium acnes HL103PA1]
          Length = 352

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 24/358 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIF 81
           M   +G+ +    VK +AYG G  +++  +          V +V EG +L        I 
Sbjct: 1   MRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAEGQELVEAGITLPIL 60

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQ 140
            L    P        + +   +     L   SK     GV+    + VD+G  R+GL  +
Sbjct: 61  KLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGVTAKIHIAVDSGMGRIGLCPE 120

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTLIS----HYKGIEAS 195
              + T  +   K  ++  + +HL  +D P        +++ F T +S    H       
Sbjct: 121 RLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTAVSLVETHRGPFPLV 180

Query: 196 LASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGEL 253
             ++SG +LG +     + R GI  YG     +     +   ++  + +  ++    G+ 
Sbjct: 181 HLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWISHVTFVKTVSVGDT 240

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           + YG     +  + IA   +GYADG    LS             G   I+G + PI+G+I
Sbjct: 241 IGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGYVLIRGSVHPIVGRI 289

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
            MD  M D+    ++ VGD + + G      +  DD+A   GT +Y++   I  R  +
Sbjct: 290 CMDQFMVDLGPDSNVTVGDEVVLIGTQGDETLTADDMAELLGTISYEITCAISKRVNR 347


>gi|320109228|ref|YP_004184818.1| alanine racemase [Terriglobus saanensis SP1PR4]
 gi|319927749|gb|ADV84824.1| alanine racemase [Terriglobus saanensis SP1PR4]
          Length = 397

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 91/399 (22%), Positives = 163/399 (40%), Gaps = 43/399 (10%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++   +  ++  + L  N  ++ A +      AVVK + YG G  + AP L  AG +   
Sbjct: 7   NAMRPVWAEVSASKLTRNLRAVQA-TAGVDVLAVVKADGYGHGAVECAPVLAAAGAKWLG 65

Query: 62  VTSVEEGVKLRLY------TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           VTSVEEGV++R            R+ V+ G+  G+        L PV+     L      
Sbjct: 66  VTSVEEGVRVRQALGILPQGIAPRVLVMCGVWAGEAVAAIRYALTPVVWEPYHLDLMEAE 125

Query: 116 MSC--GVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
                       ++VDTG  R G+    +          +   +L  ++SHLA A+    
Sbjct: 126 AKKLGLRDVAVHVEVDTGMARQGVRPGAQMAALLQRFGPESRLKLEGVMSHLASAEIVHG 185

Query: 173 HVNSVQLERFRTLISHYK--GIEASLASSS------GILLGPNYH--------FQLTRPG 216
                Q+ RF   +   +  G+  +L            ++ P             +TR G
Sbjct: 186 AQTESQMARFACALEQVRETGLRPALVHVGNTSAVDCGVVMPQLRVMAESLGAMPMTRAG 245

Query: 217 ISLYGGTDKINKSHPMQTV---VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAI 273
           ++LYG    +    P       +T + R++ +R+  AG+ V YGG     +   +A+  +
Sbjct: 246 LALYGYALDLEGGAPELHPEPVMTWKTRVVSLREVQAGDHVGYGGTFTAVKTMRLALLPV 305

Query: 274 GYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
           GYADG    LS             G   + G    ++G+++MD+T+ D+T+   +E+G+ 
Sbjct: 306 GYADGLRRELS----------SPAGAVLLHGRRAAVVGRVSMDLTIVDVTEIPGVEIGEE 355

Query: 334 IQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
             + G      I  ++ A  + T  Y+++  I  R ++ 
Sbjct: 356 AVLIGAQGAERIGAEEHARWAETIPYEIICGISERVSRV 394


>gi|254779539|ref|YP_003057645.1| Alanine racemase [Helicobacter pylori B38]
 gi|254001451|emb|CAX29451.1| Alanine racemase [Helicobacter pylori B38]
          Length = 377

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 90/381 (23%), Positives = 160/381 (41%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG+G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIIPKDACVMAVVKANAYGVGAIKASEIFLQEGANYLGVAALDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR Y  +  I +L         ++ D +L  ++ S  Q   +S++           L
Sbjct: 68  ALELRSYFSKTPILILGYSPNSNASMLIDNDLSAMVFSFEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ--- 233
           +     + IE     +       S      N    L RPGI LYG               
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNEMKESCPTIL 247

Query: 234 -TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             VV+ +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVVSLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIK----LDDVAL 348
                 +  I   + P++GK+ MD     + D    + GD + +FG          ++A+
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNDI-QAKEGDEVILFGDKSTKANDASEIAV 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|290981363|ref|XP_002673400.1| tentative alanine racemase [Naegleria gruberi]
 gi|284086983|gb|EFC40656.1| tentative alanine racemase [Naegleria gruberi]
          Length = 421

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 92/399 (23%), Positives = 156/399 (39%), Gaps = 49/399 (12%)

Query: 9   LKIDLTALKNNW----HSMNALSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFVT 63
             ++L  +  N     +     + +     VVK NAYG G   +   LY    ++ F V 
Sbjct: 32  AIVNLRNITENVENTVNFAKNYNQDIHVMPVVKANAYGHGDTPVVRELYNELSIKQFAVN 91

Query: 64  SVEEGVKLR----LYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS--SVPQLTFYSKLMS 117
            V+EGVK+R           I VL    P + K     NL P IS   +   T + +   
Sbjct: 92  RVKEGVKIRSNLSKENANIEILVLGYAIPEEVKECVTYNLTPTISGSRLIVETLFRECEK 151

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI-----ISHLACADDPSS 172
              +    L+VDTG  R G   ++  +F        +   + I      +H + AD+ S 
Sbjct: 152 QDKTINVHLKVDTGMGRFGAHPEKLENFLRWFTINPMKLYNRIKITGVFTHFSSADEMSP 211

Query: 173 HVNSVQLERFRTLISHYKG----------IEASLASSSGILLGPNYHFQLTRPGISLYGG 222
                Q  +F  +    +           +     +S+G L  P  H  + RPGIS+YG 
Sbjct: 212 DYTREQFYKFMEVKKMIENHQVSRVFEKPLTYHCCNSAGTLFFPEMHMDMIRPGISIYGL 271

Query: 223 TDKINKSHPMQTV-----VTAEARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYA 276
           +   ++  P         +T  + +  ++K   G  VSYG        D  +A+  +GY 
Sbjct: 272 SPSNDRDDPRLPFKLKPALTVVSHLGRVQKFPKGSPVSYGNTYTVAEDDETLALVPVGYG 331

Query: 277 DGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD--SLSIEVGDYI 334
           DGY    +G                I+G   PI+G+I MD  +  I+      +++ D +
Sbjct: 332 DGYKRINTG-----------KAHVLIRGEECPIVGRICMDQFVVKISPTVVDRVKINDEV 380

Query: 335 QIFGP----DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + G     ++  + V+  S T NY+++  +  R  + Y
Sbjct: 381 VLIGEQDGKEVTCEMVSHWSNTINYEVVTALLPRLKRVY 419


>gi|217033976|ref|ZP_03439399.1| hypothetical protein HP9810_883g46 [Helicobacter pylori 98-10]
 gi|216943609|gb|EEC23057.1| hypothetical protein HP9810_883g46 [Helicobacter pylori 98-10]
          Length = 377

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 161/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++ ++L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V ++ E
Sbjct: 8   VEVNTSSLRHNFGAVKSIVPKDAHIMAVVKANAYGAGAIKASEIFLQEGANYLGVATLYE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNSNASMLIDNDLSTMIFSLEQAEVFSQMALKSQKRLKIHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIEIIKKIRALKGLEVEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISH--YKGIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           +     + IE     +       S      N    L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRFLNLYRPGIMLYGFYPSNGMKETCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A+
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIAV 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|313680417|ref|YP_004058156.1| alanine racemase [Oceanithermus profundus DSM 14977]
 gi|313153132|gb|ADR36983.1| alanine racemase [Oceanithermus profundus DSM 14977]
          Length = 358

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 95/372 (25%), Positives = 161/372 (43%), Gaps = 26/372 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVT 63
               L+IDL AL  N   +   + +A+  AVVK +AYG G  ++A  L    GV+ F V 
Sbjct: 2   RPTWLEIDLGALGRNCAHLAGRAPDAQLIAVVKADAYGHGAVRVARYLRERCGVRRFAVA 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +  EG +LR       + +L  +HP   +      L P + ++     ++     G    
Sbjct: 62  TSGEGAELRAAGIAEPVLLLGALHPDDAEGAARHGLTPTLVTLAAARAFAAARPGGR--- 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VD+G  R+G++  E   F        L ++  I +H A AD+  +     QL  F 
Sbjct: 119 VQVKVDSGMGRVGVAPAELAGFMAAVEGLGL-EVEAIYTHFAVADEDEAE-TRRQLAVFL 176

Query: 184 TLISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
                  +      A+S+ IL G        RPG++LYG    + ++  ++ V+  +AR 
Sbjct: 177 EAARALPRRYPLHAANSAAILAGLGTGLDFVRPGVALYGLPPDMKEAPGLEPVLAWKARP 236

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
             +++  AG  V YG   +   +  IA    GYADG+   LS             G    
Sbjct: 237 TQVKRLPAGHGVGYGLSYRAGGEEWIATLPFGYADGFSRALSNR-----------GWVRW 285

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYI-QIFGPDIK----LDDVALASGTTNYDL 357
           +G   P+ G+++MD T   + + + +   D + ++  PD+     L   A A GT +Y+L
Sbjct: 286 RGGYAPVAGRVSMDQTTVRLPEPVGL---DEVFEVVTPDLDERTGLTGRARALGTIHYEL 342

Query: 358 LVRIGTRYAKFY 369
              +  R  + Y
Sbjct: 343 ATALSRRLPRIY 354


>gi|296392787|ref|YP_003657671.1| alanine racemase [Segniliparus rotundus DSM 44985]
 gi|296179934|gb|ADG96840.1| alanine racemase [Segniliparus rotundus DSM 44985]
          Length = 397

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 100/384 (26%), Positives = 159/384 (41%), Gaps = 36/384 (9%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++  +D  A+ +N   +   S  A+  AV+K NAYG G   +A     AG     V ++ 
Sbjct: 5   VQATVDHHAIAHNVRLLAQASAPAQVIAVLKANAYGHGAVPVARTALAAGAAQIGVATLA 64

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI------PVISSVPQLTFYSKLMSCGV 120
           E  +LR    +A I          E +      I       V +S          +    
Sbjct: 65  EAFELRQGGIEAPIIAWLHAFDPDEAVAVFAEAIASGIELGVSTSSQVRAVAEAALRADQ 124

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSV 177
               A++VDTG NR G +  E      +  N +     Q+  + SHLA AD P    N+ 
Sbjct: 125 LAVVAVKVDTGLNRGGFARGEWRKAFADLANAEAAGAVQVRGVFSHLANADRPEYRTNAE 184

Query: 178 QLERFRTLI-----SHYKGIEASLASSSGILLGPNY------HFQLTRPGISLYGGTDKI 226
           Q    R  +     +        LA+S  +L  P         F  TRPG+++YG +  +
Sbjct: 185 QARSLREAVSFARAAGLAPELVHLANSPAVLTRPKALVNELPVFNATRPGVAVYGLSPIM 244

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
            +   +   +T  AR+ L ++  AG+ VSYG       D+ +A+  IGYADG    L+G 
Sbjct: 245 GRDFGLIPAMTLTARVGLTKRIHAGDGVSYGHDFVAASDTTLALLPIGYADGLQRALAGK 304

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGP----DI 341
                       +  I G   P +G++ MD  + D+      +  GD   +FGP    + 
Sbjct: 305 F-----------EVSIGGRRYPGVGRVCMDQVLVDLGPGEPKVREGDTAVLFGPGSDGEQ 353

Query: 342 KLDDVALASGTTNYDLLVRIGTRY 365
             DD A A+GT NY+++ ++  R 
Sbjct: 354 TADDWARAAGTINYEIVTQLRGRV 377


>gi|206603563|gb|EDZ40043.1| Alanine racemase [Leptospirillum sp. Group II '5-way CG']
          Length = 406

 Score =  235 bits (600), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 99/392 (25%), Positives = 165/392 (42%), Gaps = 40/392 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              RL +DL AL NN   + +   ++     VVK +AYG G   +A      GV    V 
Sbjct: 19  SRSRLIVDLDALSNNLEWIRSRLPSSIEILPVVKADAYGHGMLPVAKNFVEMGVPALGVM 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EEGV+LR     A++ V+ GI P + +      L PVI +  +L   +  ++  +   
Sbjct: 79  GLEEGVRLRKAEISAKVIVMGGILPSELEECISCGLTPVIHN-CELLEAALDLARKMEVH 137

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+ D G  RLG   ++          +   ++  ++SH    ++ S    S Q+  F 
Sbjct: 138 IHLKFDVGMGRLGFLPEDISWVCDKIEMEPSIRIEGVMSHFPEGENISE--TSRQIAIFG 195

Query: 184 TLISHYK--------GIEASLASSSGILL------------GPNYHFQLTRPGISLYGGT 223
            ++                 LA+S+  L                Y     RPGI LYG  
Sbjct: 196 CMVDELWDRGVLYARPFVIHLANSAAFLSGQYSVADKKNRAWEKYARYWIRPGILLYGIP 255

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++  +  +AR+I ++    G  +SYGG   L+R + + V  +GYADG P  L
Sbjct: 256 VDPLPLPGLKPAMEIQARLISLKTLSEGSRISYGGTFSLSRKTRVGVLGMGYADGLPREL 315

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD-- 340
           S                   G   P LG++ MDM M D+TD+   + +GD++ + G    
Sbjct: 316 SNWGWASRM-----------GQKFPFLGRVCMDMVMVDVTDAESPVCLGDWMTVLGNGDD 364

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
             +   ++A    +  Y+++ R+G R  +FY+
Sbjct: 365 LSMSAWEIAGRIRSIPYEIVCRMGNRSPRFYS 396


>gi|15639668|ref|NP_219118.1| alanine racemase (alr) [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|3322978|gb|AAC65644.1| alanine racemase (alr) [Treponema pallidum subsp. pallidum str.
           Nichols]
          Length = 357

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 92/361 (25%), Positives = 146/361 (40%), Gaps = 32/361 (8%)

Query: 30  ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG 89
           AR    VK +AYG G   +A A  + GV  F V  V+E  +LR    +A I  L      
Sbjct: 6   ARVCLPVKADAYGHGACDVAQAALSCGVHSFAVACVQEASQLRAAGVRAPILCLSTPTAE 65

Query: 90  QEKIIFDTNLIPVISSVPQLTFYS----KLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
           +   + +  +  VIS    +   +    +    G +    +++DTG  R+G +  EA   
Sbjct: 66  EISSLIEHRVHTVISERAHIALIARALRQSADTGATCGVHVKIDTGMGRIGCAPDEACAL 125

Query: 146 THNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERFRTLISHYKGIEASLA----- 197
                      L  + +H + AD   +       +Q   F   + + +    S+      
Sbjct: 126 VQMVCATPGLHLEGVCTHFSVADSVRAEDLQYTEMQRAHFMHCVQYIRKSGISIPLVHAA 185

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAEARIILIRKALAGELV 254
           +S+ +L  P  HF + RPG+  YG                V+    ++  I+K  AG  V
Sbjct: 186 NSAALLCHPRAHFDMVRPGLLAYGYAPESVHPAVRSVFLPVMELVTQVRAIKKIPAGAYV 245

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314
           SY    +   ++ + +  IGYADG    LS            G +  I G   P++G I 
Sbjct: 246 SYQRLWRAHTETHVGILPIGYADGVMRALS-----------PGLQVCIGGKWYPVVGAIC 294

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDVALASGTTNYDLLVRIGTRYAKF 368
           MD  + D+   L + VGD + +FGP          D +A  +GT  Y+LL  IG R  + 
Sbjct: 295 MDQCVVDLGTPLRVTVGDRVTLFGPQDAGGPGQGADVLASHAGTIPYELLCAIGKRVERV 354

Query: 369 Y 369
           Y
Sbjct: 355 Y 355


>gi|116626436|ref|YP_828592.1| alanine racemase [Candidatus Solibacter usitatus Ellin6076]
 gi|116229598|gb|ABJ88307.1| alanine racemase [Candidatus Solibacter usitatus Ellin6076]
          Length = 376

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 165/377 (43%), Gaps = 30/377 (7%)

Query: 11  IDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +    +  N+ ++  ++      A VVK +AYG G  +++  L   G +   V+SVEE V
Sbjct: 11  VSREQIARNYRNVRHVAGPRTEVAGVVKADAYGHGALEVSRVLLAEGARWLAVSSVEEAV 70

Query: 70  KLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQ 127
            LR      ARI V+ G  P +   + D +L P + S+ Q+    +   S G   PY L+
Sbjct: 71  HLREGGIRDARILVMGGFLPYEANSVVDFDLTPAVHSLSQIRDIDRLAASAGKPLPYHLK 130

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI- 186
           +D+G  RLG     A +      + +   L  +++H A A D +S   + Q   F  +  
Sbjct: 131 IDSGMGRLGTRAA-AAEILATLADSRHASLEGLMTHFASAADYTSPQTAEQTAYFEAICG 189

Query: 187 ---SHYKGIEASLASSSGILLG--PNYHFQLTRPGISLYGGTDK-----INKSHPMQTVV 236
              +          SS+  +     +  + L R G +LYG           +   ++  +
Sbjct: 190 TLRAAGVTAPYLHTSSTIAIGYGRNSPAYTLVRAGHALYGYVSPARGEAPPQLLNVKPAL 249

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A+++ ++    G LV YGG  +  R   I +   GYADG    LS            
Sbjct: 250 TWKAKLLAVKDIPEGALVGYGGSFRAPRAMRIGILGAGYADGMFHRLSNR---------- 299

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
            GK    G +  I+G ++MD+T  D++ + ++  GD + + G      +    +A  +GT
Sbjct: 300 -GKVIADGKLTAIIGTVSMDLTTIDLSHTAALGPGDEVTLLGVEGDASLDAQQIAKVAGT 358

Query: 353 TNYDLLVRIGTRYAKFY 369
            +Y++L  I +R  + Y
Sbjct: 359 ISYNILCSISSRVHRVY 375


>gi|253583474|ref|ZP_04860672.1| alanine racemase [Fusobacterium varium ATCC 27725]
 gi|251834046|gb|EES62609.1| alanine racemase [Fusobacterium varium ATCC 27725]
          Length = 364

 Score =  235 bits (599), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 161/373 (43%), Gaps = 30/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              L+ID+  LK N + +  L        V+K N+YG G  +IA  L   G++ F V S+
Sbjct: 2   RAWLEIDMDNLKYNLNKIKELVHGTNVLGVIKANSYGFGAIEIAKELSKFGIEIFGVASL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++LR    +  I +L  +   + +I  +      +SS+ Q+ F     S  +     
Sbjct: 62  EEAMELREGGIEEEILILGSLFNDEIEIAAEKKFQITVSSMRQIEFLE---SNKIDAEIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERF 182
           +++DTG  RLG +  E         N+ L ++  I SHL+ AD  +         Q+ +F
Sbjct: 119 IKIDTGMGRLGFTPSEGRKAVDYCINRGL-KVVGIYSHLSDADGMNDEAYNYTKEQINKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           +    +       + +S GIL   + +   L R GI +YG      +    + V T + R
Sbjct: 178 KIFEEYKTIKYIHILNSGGILRFNDGFKGNLVRAGICMYGMLGN-ERVPGFKRVFTMKTR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ IR       +SYG   KL +    A  AIGYADG     S                 
Sbjct: 237 ILFIRTLEEDSYISYGRTIKLKKGETFATLAIGYADGMKKEFSN-----------KTYAL 285

Query: 302 IKGYMVPILGKITMDMTMFDITD--SLSIEVGDYIQIFGPDIKLDDVALASGTTN---YD 356
           I+G   PI+G+I MDM M  I +     I +G    +   DI ++++     + +   +D
Sbjct: 286 IEGEKCPIVGEICMDMCMVKIPESILKKINIGTEAIVIRDDI-IEEI----NSIHKSTWD 340

Query: 357 LLVRIGTRYAKFY 369
           +L  IG R  + Y
Sbjct: 341 ILTGIGRRVYRVY 353


>gi|282892299|ref|ZP_06300695.1| hypothetical protein pah_c221o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497890|gb|EFB40241.1| hypothetical protein pah_c221o033 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 836

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 158/374 (42%), Gaps = 26/374 (6%)

Query: 11  IDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           I+L  +++N + +   L    R   +VK  AYG    +IA  L +  +    V+ V+EG+
Sbjct: 469 INLATIESNLNLIRQKLPSQTRLMVMVKALAYGTEDIQIAKFLASCQIDILGVSYVDEGI 528

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            L+    +  IF L        KI+     + V           +           L +D
Sbjct: 529 ALKRAGVKQAIFALSATPAEITKILRWEIEVGVGDQAFIQALAKEASIQQKEIKVHLHID 588

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERFRTLISH 188
           TG +R G   +EAL            +L  +++H ACA+D         Q+ +F   ++ 
Sbjct: 589 TGMSRFGCRPEEALPLAQMIQEAPFLKLEGVMTHFACAEDLEQDPFTHQQINKFDAAVAE 648

Query: 189 YKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPMQTVVTAEAR 241
            + +  S+      +SS         + + R G+++YG   +  +  S  ++  ++  +R
Sbjct: 649 IQALGISIPWKHAANSSAATRFHLPQYNMVRIGLAVYGLFSSPIVRDSLKLKLALSLLSR 708

Query: 242 IILIRKALAGELVSYGGQKKLTRD-SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           I+ I     GE +SYG    + +    IAV  IGY DG     SG            G  
Sbjct: 709 IVGINVCKQGETISYGRNYTVEKPLQRIAVLPIGYFDGLHRHYSG-----------KGWV 757

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNY 355
            + G   P++G I MD  M DITD  + +VGD + IFG D     +  +D+A+   +  +
Sbjct: 758 LVHGQKAPMIGNICMDFMMIDITDIPTAQVGDTVLIFGEDEHRNFLSPEDLAMRGESIVH 817

Query: 356 DLLVRIGTRYAKFY 369
           +L+  IG R  + +
Sbjct: 818 ELVTCIGPRIPRIF 831


>gi|124516677|gb|EAY58185.1| Alanine racemase [Leptospirillum rubarum]
          Length = 406

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 98/392 (25%), Positives = 161/392 (41%), Gaps = 40/392 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              RL +DL AL NN   + +   ++     VVK +AYG G   +A      GV    V 
Sbjct: 19  SRSRLIVDLDALSNNLEWIRSRLPSSIEILPVVKADAYGHGMLPVAKNFVEKGVPALGVM 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +EEGV+LR     A++ V+ GI P + +      L PVI +  +L   +  +S  +   
Sbjct: 79  GLEEGVRLRKAEISAKVIVMGGILPSELEECIAFGLTPVIHN-CELLEAALDLSRKMEVH 137

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+ D G  RLG   ++          +   ++  ++SH    +  +    S Q+  F 
Sbjct: 138 IHLKFDVGMGRLGFLPEDISWVCDKIGRESSLRIEGVMSHFPEGEKIAE--TSRQIGIFG 195

Query: 184 TLISHYKGIEASLASSSGILL--------------------GPNYHFQLTRPGISLYGGT 223
            ++       A       I L                       Y     RPGI LYG  
Sbjct: 196 CMVDELWDRGALCDRPFVIHLANSAAFLSGQYSVADKKNRAWEKYARYWIRPGILLYGIP 255

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++  +  +AR+I ++    G  +SYGG   L+R + + V  +GYADG P  L
Sbjct: 256 VDPLPLPGLKPAMEIQARLISLKTLSEGSRISYGGTLSLSRKTRVGVLGMGYADGLPREL 315

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD-- 340
           S                   G   P LG++ MDM M D+TD+   + +GD++ + G    
Sbjct: 316 SNWGWASRM-----------GQKFPFLGRVCMDMVMVDVTDAESPVCLGDWMTVLGNGED 364

Query: 341 --IKLDDVALASGTTNYDLLVRIGTRYAKFYT 370
             +   ++A    +  Y+++ R+G R  +FY+
Sbjct: 365 SSMSAWEIAGRIRSIPYEIVCRMGNRSPRFYS 396


>gi|221134843|ref|ZP_03561146.1| alanine racemase [Glaciecola sp. HTCC2999]
          Length = 377

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 26/383 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++ID   L  N+  +N  S  + +   VVKD AYG G   IA A  +AG   
Sbjct: 6   MSGIRSAWVEIDHQQLLTNFELINQDSPAHLKKLCVVKDQAYGHGGVVIAKAARDAGYDY 65

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSC 118
             V +++E ++LR    +  I +   +   +        +   ++ + +   ++   ++ 
Sbjct: 66  LAVETIDEAIELRDAQIELPILIFGEVSDAEFAACLAYRITCCVNDIDKARRFNALCLAQ 125

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK-LGQLSLIISHLACADDPSSHVNSV 177
           G++H   +++D+G +R G+   +A+        +     L  ++SH A +D+      ++
Sbjct: 126 GINHTVHIEIDSGMSRWGVRWSDAIPVIEYIARECDGLVLEGMMSHFAMSDEADKTYANL 185

Query: 178 QLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSH 230
           Q  RF  +I   +  +       ++++ G+L  P+ HF + R GI   G    +   +  
Sbjct: 186 QHSRFVEVIEALEQTDITIPLIHMSNTGGLLDLPHAHFNMIRSGILHLGVYPSLVCKRIE 245

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ +++ +A+I  +R+   G+ V YG     +    IA+  IGY DGYP          
Sbjct: 246 GLKPIMSVKAQIPALRQLQVGDCVGYGMHFTASTPMQIAILPIGYGDGYPR--------- 296

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
              V   G   I G   P++G   MD  M D++   ++ +GD + + G      I   D+
Sbjct: 297 ---VRNEGYVLIHGQQCPVVGGNAMDAMMVDVSHLDNVSIGDEVVLMGGQGDEWIDPRDL 353

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
                T  Y++L     R  + Y
Sbjct: 354 VKWKKTVCYEILTGWRARLPRRY 376


>gi|260497955|ref|ZP_05816072.1| alanine racemase [Fusobacterium sp. 3_1_33]
 gi|260196516|gb|EEW94046.1| alanine racemase [Fusobacterium sp. 3_1_33]
          Length = 354

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 100/373 (26%), Positives = 163/373 (43%), Gaps = 32/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +I   L   GV  F V ++
Sbjct: 2   RTWVEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSVEITKILQEIGVNFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I ++      +        +   ISS+ Q      L++  ++    
Sbjct: 62  EEAIELQEAGIKDKILIIGASFEDELIEATKRGVHVAISSMGQ---LQFLVNNKLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  + SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAKKVIEFCKNNNL-NLVGVFSHLSDSDGNTVETKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSS-GILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           + +I+        +++S+       +    L R GI +Y  T    K+  ++ + T ++R
Sbjct: 178 KKIINPLNLKYIHISNSAGITNFHNDIVGNLVRMGIGMYSFTGN-KKTPYLKNIFTIKSR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I+K      VSYG    L  DS  AV  IGYADG    LS            GG   
Sbjct: 237 LLFIKKVKKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGYVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----Y 355
           I  +   I+G I MDMTM  I   +   +++GD + +   DI LD++            +
Sbjct: 286 INNHRCEIIGNICMDMTMIRIPKEIENSVKIGDEVTVINADI-LDNLN-----IPELCVW 339

Query: 356 DLLVRIGTRYAKF 368
           + +  IG R  + 
Sbjct: 340 EFMTGIGKRVKRI 352


>gi|121592611|ref|YP_984507.1| alanine racemase [Acidovorax sp. JS42]
 gi|166919544|sp|A1W2F6|ALR_ACISJ RecName: Full=Alanine racemase
 gi|120604691|gb|ABM40431.1| alanine racemase [Acidovorax sp. JS42]
          Length = 365

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 86/374 (22%), Positives = 150/374 (40%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+ +N       + +AR  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPILATIHPAAVHHNLERARRAAPDARVWAVVKANAYGHGIERVFEGLRA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++     L   +    Q+ + +   +  V H 
Sbjct: 61  LAEAERVRALGWRGPILLLEGVFEPRDLELCSRLGLWHAVHCDAQIDWLAAHKTQ-VPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + +                    ++H + AD P     + Q++ F+
Sbjct: 120 VFLKMNSGMNRLGFTPERYRSAWARLNALPQVDEISCMTHFSDADGPRG--IAHQVQAFQ 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINK----SHPMQTVVT 237
                  G      S++ +  G +        R GI LYG      +       +Q  +T
Sbjct: 178 AATQDLPGERCIANSAALLRHGGDAQVRLDWVRAGIVLYGSAPDHPERRAADWDLQPTMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +RII +++  AG+ V YG +        I + A GYADGYP                G
Sbjct: 238 LASRIIGVQQLQAGDTVGYGSRFTAQGPLGIGIVACGYADGYPRHCD-----------TG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM   D+T      +G  + ++G       + +D+VA A GT
Sbjct: 287 TPVLVNGVRTRTIGRVSMDMLAVDLTPVPGAGLGAEVTLWGRAANGAVLPIDEVAQAGGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 347 IGYELMCALAPRVP 360


>gi|222109415|ref|YP_002551679.1| alanine racemase [Acidovorax ebreus TPSY]
 gi|254802363|sp|B9MAN2|ALR_DIAST RecName: Full=Alanine racemase
 gi|221728859|gb|ACM31679.1| alanine racemase [Acidovorax ebreus TPSY]
          Length = 365

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 88/374 (23%), Positives = 151/374 (40%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+ +N       + +AR  AVVK NAYG G E++   L       F +  
Sbjct: 3   RPILATIHPAAVHHNLERARRAAPDARVWAVVKANAYGHGIERVFEGLRA--ADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++     L   +    Q+ + +   +  V H 
Sbjct: 61  LAEAERVRALGWRGPILLLEGVFEPRDLELCSRLGLWHAVHCDAQIDWLAAHKTQ-VPHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + +                    ++H + AD P     + Q++ F+
Sbjct: 120 VFLKMNSGMNRLGFTPERYRSAWARLNALPQVDEISCMTHFSDADGPRG--IAHQVQAFQ 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINK----SHPMQTVVT 237
           T      G      S++ +  G +        R GI LYG      +       +Q  +T
Sbjct: 178 TATRDLPGERCIANSAALLRHGGDAQVRLDWVRAGIVLYGSAPDHPERRAADWDLQPTMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +RII +++  AG+ V YG +        I V A GYADGYP                G
Sbjct: 238 LASRIIGVQQLQAGDTVGYGSRFTAQGPLGIGVVACGYADGYPRHCD-----------TG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM   D+T      +G  + ++G       + +D+VA A GT
Sbjct: 287 TPVLVNGVRTRTIGRVSMDMLAVDLTPVPGAGLGAEVTLWGRAANGAVLPIDEVAQAGGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 347 IGYELMCALAPRVP 360


>gi|222081869|ref|YP_002541234.1| alanine racemase [Agrobacterium radiobacter K84]
 gi|221726548|gb|ACM29637.1| alanine racemase [Agrobacterium radiobacter K84]
          Length = 377

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 127/365 (34%), Positives = 201/365 (55%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL+ N+ ++ A    A+ AAVVK +AYGLG +++APALY++G +DFFV    E 
Sbjct: 23  LTIDLVALRRNYETIAAAVAPAKAAAVVKADAYGLGADRVAPALYHSGCRDFFVAQFGEA 82

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            KLR +    ARI+VL G+ PG E     T ++PV++S+ Q   +     +     P AL
Sbjct: 83  EKLRPHLEADARIYVLNGLQPGAEGTCAQTGVVPVLNSMEQYKRWRSTALAQNRVLPAAL 142

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG  RLG+  ++   F     +  + ++  I+SHLA AD+  +  N+ QL   R + 
Sbjct: 143 QFDTGMTRLGIPPEDRAAFAAELTHTDVVEIRFIMSHLASADETDNGQNAQQLAEMRKIA 202

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + +     S A+S G+ LG +YH  LTR GI++YGG   ++KS+ +Q V+  +  ++  R
Sbjct: 203 AEFPQFSVSFANSGGVFLGSDYHGVLTRAGIAVYGGALTVDKSNNIQPVIRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G L+ YGG      +  +A  A GYADG P  L              G  + +G  
Sbjct: 263 SVPPGTLIGYGGAHAAKVEMRLATLAAGYADGLPRCLGDR-----------GAVYYEGVR 311

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI+G+++MD    D+T      + +G  +++ GP   L+D+A ++GT +Y++L  +G R
Sbjct: 312 LPIVGRVSMDSITIDVTALPPGTLMLGSLVEVIGPHQTLEDLAKSAGTISYEILTGLGHR 371

Query: 365 YAKFY 369
           Y + Y
Sbjct: 372 YHRDY 376


>gi|317014351|gb|ADU81787.1| alanine racemase [Helicobacter pylori Gambia94/24]
          Length = 377

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 165/381 (43%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++++  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVNTHSLRHNFDAVKSIVPKDACVMAVVKANAYGAGALKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  ++ S+ Q   +S++           L
Sbjct: 68  ALELRSHFSKTPILILGYSPNTNASMLIDNDLSAMVFSLEQAEVFSQMALKSQKRLKVHL 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPTFKSIETIKKIRALKGLEVEGIFTHLSNADANIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLNQKIEFKYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSSEMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +ARI+ I++   GEL+ YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKARIVQIKRVKKGELIGYGKHFYTNEETLVGVLALGYADGLVRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++A 
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-EAKEGDEVILFGDKSAKANDASEIAT 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIPYETISTLSKRLERVY 376


>gi|317152532|ref|YP_004120580.1| alanine racemase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942783|gb|ADU61834.1| alanine racemase [Desulfovibrio aespoeensis Aspo-2]
          Length = 384

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/396 (25%), Positives = 159/396 (40%), Gaps = 41/396 (10%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     ++++I L  L  N      + G      V+K +AYG G  ++   L   G    
Sbjct: 1   MIDYNKIQVEISLDNLAANVRRFQGVCGT--VIPVIKSDAYGHGLAEVTRTLAAEGATTL 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  V E VKLR      RI  L G         +++ +++  I+++ QL+  +      
Sbjct: 59  AVGYVNEAVKLRCLGWTGRILALLGPVDEADAAALWEHDILAAIANMDQLSRVAGAARTR 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN-SVQ 178
                 L+ DTG  RLG   +                  +  +HLA AD P    N ++Q
Sbjct: 119 GRLDICLKFDTGMRRLGFRPEGLAALVDALRANPALVPVMASTHLASADVPEHEANVTMQ 178

Query: 179 LERFRTLISH----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-----INKS 229
             RF++++         +EA++A+S+G +          R GI++YGG          + 
Sbjct: 179 AGRFQSVLDGLEQAGYQVEANIANSAGAMAHKACRMDSMRLGIAMYGGNPFHGTSWEERG 238

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +   +   A ++ +     GE VSYG      RD  +AV  +GYAD Y  +LS     
Sbjct: 239 QGLLPTMQVSAPVLHVHTLRQGEGVSYGWTHVAGRDCEVAVVGVGYADNYSRSLSSR--- 295

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT------------DSLSIEVGDYIQIF 337
                   G   IKGY VPILG++ M MT+ D+T            D   +  GD   + 
Sbjct: 296 --------GFMNIKGYRVPILGRVCMQMTVVDVTGLMGEGLAGELGDGPGVRPGDQAWLL 347

Query: 338 G----PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G      I  +D+A   GT  Y+    +G    + Y
Sbjct: 348 GGPAPGTITPEDLAGWWGTIPYEAFCLLGM-NPRSY 382


>gi|330952099|gb|EGH52359.1| alanine racemase [Pseudomonas syringae Cit 7]
          Length = 308

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 16/317 (5%)

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
              F V  +EE ++LR    +A + +L G     E  +   + +  +          +  
Sbjct: 3   ADGFAVACIEEALELRTAGIRAPVLLLEGFFEADELALIVEHDLWTVVHAVWQLEAIEQA 62

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             G      L++DTG +R+GL   E                 +++SH + AD+ +S  + 
Sbjct: 63  RLGKPITVWLKLDTGMHRVGLHPHEYQAAYQRLLATGKVARIVLMSHFSRADELNSACSD 122

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQ 233
            QL  F T        E SL +S  +L  P      +RPGI LYG T        +  +Q
Sbjct: 123 EQLAVFETF-RKGLAAETSLKTSPAVLGWPQIPSDWSRPGIMLYGATPFDQVHPLADRLQ 181

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+T E++II +R+   GE V YG      R   I V A+GYADGYP             
Sbjct: 182 PVMTLESKIISVRELPVGEPVGYGATFVCDRPLRIGVVAMGYADGYPRHA---------- 231

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
              G    I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  + T 
Sbjct: 232 -PTGTPVQIDGQPSRLLGRVSMDMLSVDLTDVPQAGLGSRVELWGKQVLASEVAQRAETI 290

Query: 354 NYDLLVRIGTRYAKFYT 370
            Y++   +  R  + Y+
Sbjct: 291 PYEIFCNL-RRVPRIYS 306


>gi|183602553|ref|ZP_02963918.1| alanine racemase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219683598|ref|YP_002469981.1| alanine racemase [Bifidobacterium animalis subsp. lactis AD011]
 gi|183218194|gb|EDT88840.1| alanine racemase [Bifidobacterium animalis subsp. lactis HN019]
 gi|219621248|gb|ACL29405.1| alanine racemase [Bifidobacterium animalis subsp. lactis AD011]
          Length = 452

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 165/405 (40%), Gaps = 42/405 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNALS----GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             ++ +DL AL++N   +  ++    G      VVK +AYG G    A A    G     
Sbjct: 28  PAQVIVDLAALRDNMRHLVDITNREGGPTEVMGVVKADAYGHGLVPSALAALAGGATWLG 87

Query: 62  VTSVEEGVKLRLYTP---QARIFVLYGIH---PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           V    E + LR       +AR+          P  + I  D +L     +  Q       
Sbjct: 88  VAQAREALALRNAGIGVDRARVLTWVNNPLHAPYDDLIAADVDLSVATLTAIQ-KIAEAA 146

Query: 116 MSCGVSHPYALQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDP-- 170
            + G      ++VDTGF R G     +  A+D      ++ + ++    SHLA AD P  
Sbjct: 147 RAVGKPARVHIKVDTGFGRNGFTLAQIDSAIDLLLPLVDEGVFEIVGQWSHLAVADAPAV 206

Query: 171 --SSHVNSVQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGT 223
                    Q+  F    S  H +GIE     LA+++  L  P  H+ L RPG++LYG  
Sbjct: 207 GEFVEKTDEQIRVFEEFTSRLHARGIEPRIRHLANTAATLSRPEIHYDLVRPGVALYGYE 266

Query: 224 DKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
                  P +      +T +A++  ++   AGE +SYG        +  A+  +GYADG 
Sbjct: 267 ADPAMGTPSKYELRPAMTLQAQLSSVKNVGAGEGLSYGRVYVTDEPTSAAIVPVGYADGI 326

Query: 280 PLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDITDSLS---IEVG 331
             + SG +   S  V   G    +    G     + G++ MD  + D+        + +G
Sbjct: 327 HRSASGFNEAGSKHVNKPGAPVRVMTRDGARIFHVSGRVCMDQFILDLHGDAENMGVHIG 386

Query: 332 DYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 387 DTVELFGPGRGEDYLEPTADDWARAADTISYEIFTCLRNRVPRLY 431


>gi|160936433|ref|ZP_02083802.1| hypothetical protein CLOBOL_01325 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440716|gb|EDP18454.1| hypothetical protein CLOBOL_01325 [Clostridium bolteae ATCC
           BAA-613]
          Length = 374

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 104/380 (27%), Positives = 154/380 (40%), Gaps = 27/380 (7%)

Query: 6   FLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           + ++ IDL  +  N+  + + L       AVVK +AYGLG   IA  L  AG   F VT 
Sbjct: 3   YTQMDIDLDVIAENYKKVSDRLPEETGIIAVVKADAYGLGAVPIAKKLEKAGCPMFAVTF 62

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHP 123
           +EE VKLR    +A I V+      +  I     LI  I+        S  +     S P
Sbjct: 63  MEEAVKLREAGIKAPILVMMPAESKELLIAGKHKLIITITDYEMAKQISDELVKQSYSLP 122

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNS----FNKKLGQLSLIISHLACADDPSSHVN---S 176
             L+VD G +R+G+ L++ L+                   + SHL  A    ++     +
Sbjct: 123 AHLKVDCGLSRMGIVLKDRLEEAAEEAAKIHALPNLNTEAVFSHLTAAGTEGAYAALDLA 182

Query: 177 VQLERF---RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            Q   F   + L      I+  L SS   +  P       R G  LYG   +      ++
Sbjct: 183 EQQRFFELIKMLKKKNISIKTHLMSSDPYIWYPQTPGDYIRVGSILYGICPERYSCCGIK 242

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++    I+ I+       VSYG   +  R + IAV  +G+ADG    LS         
Sbjct: 243 NCMSMNTYIVQIKWIPRDTEVSYGPLYRTVRRTKIAVVPVGFADGIRRALSN-------- 294

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G+  I G  VPI+GKI  D T+ D+TD   ++VGD + IFG +        D A  
Sbjct: 295 ---KGEMLIHGKRVPIIGKICCDHTILDVTDIEEVKVGDEVTIFGRNGEESQTAGDYAEL 351

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
              +  +  V    R  + Y
Sbjct: 352 CNASAPETTVIFSARIPRNY 371


>gi|158423689|ref|YP_001524981.1| alanine racemase [Azorhizobium caulinodans ORS 571]
 gi|158330578|dbj|BAF88063.1| alanine racemase [Azorhizobium caulinodans ORS 571]
          Length = 393

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 128/365 (35%), Positives = 197/365 (53%), Gaps = 15/365 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  +   +  A  AAVVK +AYGLG   ++  LY  G + FFV    E 
Sbjct: 39  LTIDLGALARNYRKLKETAAPAAVAAVVKADAYGLGAGLVSERLYAEGCRHFFVAHFVEA 98

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYAL 126
           V+LR   P +A + VL G+ PG+E+   D  + PVI+ + Q   ++      G     A+
Sbjct: 99  VRLRPTLPVEATLLVLNGLMPGEEEHAADLGVTPVINCLEQAAAWATEAKVRGTRLKAAI 158

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG +RLGLS  +      +S   +  +  L++SHLACAD P++  ++ QL   + + 
Sbjct: 159 QIDTGMSRLGLSEADVASLRADSLFAEAVEPILLMSHLACADTPAAPASAGQLAVMQRVA 218

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +H+ G+  SLA+S G+ LG  +HF L RPGI++YGG    + ++PM+ VV  +  +I  R
Sbjct: 219 AHFPGLPVSLANSGGVFLGGAFHFALARPGIAVYGGAPVSDVANPMEPVVRIDIPVIQAR 278

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AG  V YGG    T ++ +A  + GYADG P  LS             G  + +G  
Sbjct: 279 TVPAGTAVGYGGTFVTTGETRLATLSGGYADGIPRHLSSS-----------GALYYQGVR 327

Query: 307 VPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
           +PI G+++MD    D +      + +G  ++  GP   L+ VA  +GT +Y++L R+G R
Sbjct: 328 LPIAGRVSMDSLTVDASALPEGGLRLGTMVEFVGPSQSLEQVAADAGTISYEILTRLGRR 387

Query: 365 YAKFY 369
           Y + Y
Sbjct: 388 YRRVY 392


>gi|269955481|ref|YP_003325270.1| alanine racemase [Xylanimonas cellulosilytica DSM 15894]
 gi|269304162|gb|ACZ29712.1| alanine racemase [Xylanimonas cellulosilytica DSM 15894]
          Length = 441

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 100/398 (25%), Positives = 165/398 (41%), Gaps = 34/398 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R  +DL A+++N  ++ A + ++   AVVK +AYG G    A A    G     V   
Sbjct: 12  PARAVVDLEAVRDNVRALRAHAPSSALMAVVKADAYGHGLVPTAWAALAGGATWLGVAQA 71

Query: 66  EEGVKLRLYTP---QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            E V LR        ARI             +   ++   +++   L   +      G  
Sbjct: 72  AEAVALRAAGIGPGDARILTWLHSPGVDFDPLVAADVDVSVAAPWALDGVAAAARATGRV 131

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL---GQLSLIISHLACADDPSSHVNSVQ 178
               L+VDTG  R G++  +       +          +  + +HLA AD+P     + Q
Sbjct: 132 ARVHLKVDTGLGRNGITPADLPAAAARAAALVAEGAIHVVGVWTHLAYADEPGHPTIAAQ 191

Query: 179 LERFRTLIS--HYKGIEASLA---SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KS 229
                  +      GIE  L    +S+  L  P  H+ L RPGIS+YG +         S
Sbjct: 192 RVVLDDAVRTVEAAGIEVELRHAANSAATLTAPALHYDLVRPGISVYGFSPVPGVATASS 251

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++  +T +AR+  ++   AG+ VSY  +   T+ + + V  +GYADG P   SG D  
Sbjct: 252 FGLRPAMTLQARLATVKNVEAGQGVSYAHRYVTTQATQLGVVPLGYADGIPRHASGGDDG 311

Query: 290 HSPSVFLGGKGFI---------KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
               V++GG              G +V + G++ MD  + D+    + + GD + +FG  
Sbjct: 312 PGGPVYVGGPAGAGIGPAGDGDGGRVVRVAGRVCMDQVVLDLGPYATEQPGDVVTLFGST 371

Query: 341 ---------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                       +D A A+GT +Y+++ RI  R  + Y
Sbjct: 372 DGLAHSASVPSAEDWAAAAGTISYEIVTRIAPRIPRVY 409


>gi|283783501|ref|YP_003374255.1| alanine racemase [Gardnerella vaginalis 409-05]
 gi|283441514|gb|ADB13980.1| alanine racemase [Gardnerella vaginalis 409-05]
          Length = 459

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 166/406 (40%), Gaps = 44/406 (10%)

Query: 8   RLKIDLTALKNNWHSMNALSGN--------ARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++ +DL AL++N  ++ A                 VVK   YG G    A A    G   
Sbjct: 33  QVIVDLKALRDNMRTLVARVSQDLQPGQNAPEVMGVVKAGGYGHGLIPSALAALAGGATW 92

Query: 60  FFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
                  E ++LR      +R  +L  +         D     +  SV  +     +   
Sbjct: 93  LGTAQPYEALRLRAVGIDSSRCHILTWLTSAPTTRFADLITADIDISVGSIDSLDAVAFA 152

Query: 119 ----GVSHPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPS 171
               G      ++VDTGF R G + +    AL+      ++ + ++    SHLA AD P 
Sbjct: 153 ARKLGKPARVHVKVDTGFGRNGFTPEGFCAALEKLQQYSSEGVIEVIGQWSHLAVADSPD 212

Query: 172 SH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
                     Q+++F       K          LA+++  L  P   F+L RPGI LYG 
Sbjct: 213 VPEFVDATDRQIQQFHEFTKRMKEASVAPKIRHLANTAATLNRPEIRFELVRPGIGLYGY 272

Query: 223 TDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                    +++ +Q  +T +A++  ++    G  +SYG       ++  A+  +GYADG
Sbjct: 273 EPDPAMGNSQTYGLQPAMTLQAQLGTVKTVEEGHGISYGRTYLTPNNTSTAIVPLGYADG 332

Query: 279 YPLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDI-TDSLSIEV-- 330
              + SG D + +  V   GG   +    G   V + G++ MD  + D+  D+  + V  
Sbjct: 333 ILRSASGFDMQGARHVNKPGGPVRVETKNGARIVNVSGRVCMDQFIVDLKGDASELGVLE 392

Query: 331 GDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G+ + +FGP       +   DD A A+GT +Y+++  IG R  + Y
Sbjct: 393 GNTVTLFGPGRGLEFAEPTADDWAEAAGTISYEIMTGIGPRVPRLY 438


>gi|294791096|ref|ZP_06756254.1| alanine racemase [Scardovia inopinata F0304]
 gi|294458993|gb|EFG27346.1| alanine racemase [Scardovia inopinata F0304]
          Length = 460

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 100/414 (24%), Positives = 166/414 (40%), Gaps = 48/414 (11%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS------------GNARTAAVVKDNAYGLGCEKIAPA 51
               +  +DL AL++N   +  L+            G A+   VVK +AYG G    A A
Sbjct: 26  QYPAQAIVDLAALRDNMRHLTDLADEAAKSGKNPAQGPAQVMGVVKADAYGHGLIPTALA 85

Query: 52  LYNAGVQDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSV 106
               G          E + LR             ++  G +   +K+I     I + S  
Sbjct: 86  ALAGGATWLGTAQSREALLLRKLGIGPDRARILTWLYNGKYDPFDKLIGHDIDIALGSVQ 145

Query: 107 PQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISH 163
                 +   + G      ++VDTGF R G +    +EAL+      ++ L  +  + SH
Sbjct: 146 GIEAVAAAARTAGKKARVHIKVDTGFGRNGFTPEEFEEALNLLKEKVHENLLDVVGVWSH 205

Query: 164 LACADDPSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTR 214
           LA AD+P+          Q+  F   +              LA+++  L  P  H++L R
Sbjct: 206 LAVADNPADPECRAATEEQIASFSRFVDRMDNAGLHPSLRHLANTAATLTRPQIHYELVR 265

Query: 215 PGISLYGGTDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAV 270
           PG+ LYG              ++  +T +A++  ++   AG  +SYG     T+ +  A 
Sbjct: 266 PGVGLYGYEPDPAMGTASDWGLKPAMTVQAQLGTVKNLPAGHSISYGRTYMTTQATSTAD 325

Query: 271 AAIGYADGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITD- 324
             +GYADG   + SG +   S  V   G    I       +V I G++ MD  + D+   
Sbjct: 326 LPVGYADGIHRSASGFNRAGSLGVDHPGAPVRIMTSQGPKIVHISGRVCMDQCILDLQGF 385

Query: 325 --SLSIEVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              L +  GD +++FGP       +   DD A A+GT +Y++   +  R  + Y
Sbjct: 386 ASDLGVCEGDTVELFGPGRGEQFGEPTADDWARAAGTISYEIFTCLRNRIPRLY 439


>gi|332530410|ref|ZP_08406354.1| alanine racemase [Hylemonella gracilis ATCC 19624]
 gi|332040122|gb|EGI76504.1| alanine racemase [Hylemonella gracilis ATCC 19624]
          Length = 377

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 92/387 (23%), Positives = 157/387 (40%), Gaps = 42/387 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL++N     A + +A+  AVVK NAYG G E++   L   G   F +  
Sbjct: 3   RPIQALIHTGALRHNLARARAAAPDAKVWAVVKANAYGHGIERVYEGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++     L  V+    Q+ + +   +    H 
Sbjct: 61  LGEAERVRALGWRGPILLLEGVFDPRDLELCSRLGLWHVVHETRQIDWLAMHKTHA-PHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   +               +   +I+H + AD P     + QL  F 
Sbjct: 120 VFLKMNSGMNRLGFRPEAFRAAWARLDALPQVEEITLITHFSDADGPRGI--ASQLALFN 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH-----------FQLTRPGISLYGGTDKINKSHPM 232
                  G E SLA+S+  L                     RPGI++YG      +    
Sbjct: 178 ATTQDLPG-ERSLANSAATLRHMGAQGRTSSDAEGLRSDWVRPGIAVYGSAPDYPEHDAA 236

Query: 233 QT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +T  +RII +++  AG+ V YG      +   + V A GYADGY         
Sbjct: 237 HWDLHPTMTLRSRIIGVQQLQAGDTVGYGSAFTAQQPMRVGVVACGYADGYMR------- 289

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS----IEVGDYIQIFGPD---- 340
                   G    + G    ++G+++MDM   D+          +VG  + ++G      
Sbjct: 290 ----VAPTGTPVLVDGVRTRLVGRVSMDMLTVDLEPVRQAGLAADVGSEVTLWGQAGNGA 345

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYA 366
            + +D+VA A+GT +Y+L+  +  R  
Sbjct: 346 VLDIDEVARAAGTLSYELMCALALRVP 372


>gi|314983018|gb|EFT27110.1| alanine racemase [Propionibacterium acnes HL110PA3]
          Length = 352

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/358 (22%), Positives = 143/358 (39%), Gaps = 24/358 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIF 81
           M   +G+ +    VK +AYG G  +++  +          V +V EG +L        I 
Sbjct: 1   MRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAEGQELVEAGITLPIP 60

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQ 140
            L    P        + +   +     L   SK     GV+    + VD+G  R+GL  +
Sbjct: 61  KLSPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGVTAKIHIAVDSGMGRIGLCPE 120

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTLIS----HYKGIEAS 195
              + T  +   K  ++  + +HL  +D P        +++ F T +S    H       
Sbjct: 121 RLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTAVSLVETHRGPFPLV 180

Query: 196 LASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGEL 253
             ++SG +LG +     + R GI  YG     +     +   ++  + +  ++    G+ 
Sbjct: 181 HLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWISHVTFVKTVSVGDT 240

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           + YG     +  + IA   +GYADG    LS             G   I+G + PI+G+I
Sbjct: 241 IGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGYVLIRGSVHPIVGRI 289

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
            MD  M D+    ++ VGD + + G      +  DD+A   GT +Y++   I  R  +
Sbjct: 290 CMDQFMVDLGPDSNVTVGDEVVLIGTQGDETLTADDMAELLGTISYEITCAISKRVNR 347


>gi|163857474|ref|YP_001631772.1| catabolic alanine racemase [Bordetella petrii DSM 12804]
 gi|226711028|sp|A9IU63|ALR_BORPD RecName: Full=Alanine racemase
 gi|163261202|emb|CAP43504.1| catabolic alanine racemase [Bordetella petrii]
          Length = 376

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 90/385 (23%), Positives = 151/385 (39%), Gaps = 39/385 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL---------SGNARTAAVVKDNAYGLGCEKIAPALYNA 55
             +   I L AL +N   +                   AV+K NAYG G E  A     +
Sbjct: 3   RPIHASISLAALAHNLDVVRRHLDQAAQAAGGAPPSIWAVIKANAYGHGIE--AAVAGFS 60

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
             Q   +  + E V+ R       I +L G   P    +I   +L   + +  QL   ++
Sbjct: 61  AAQGLAMLDLAEAVRCREAGWGGPILLLEGFFQPADLDLIDRYHLSATVHTREQLDMLAQ 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPS 171
                      L++++G NRLG            +   +   +      ++H ACAD   
Sbjct: 121 -ARLSRRVDIMLKLNSGMNRLGFDPDAYGSAHARALQLREQGVVGAVGRMTHFACAD--G 177

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPN------YHFQLTRPGISLYGGTDK 225
           +   + QL  F+++         S+ +S+  L  P             RPGI LYG +  
Sbjct: 178 TPGVAGQLRVFQSVTQGLADGPVSVCNSAATLRYPEIAVAHGAQAHWVRPGICLYGASPF 237

Query: 226 INKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT 282
            +       ++  ++  ++II ++   AG  V YG   +  R   + V A GYADGYP  
Sbjct: 238 ADADAASFGLRPAMSLRSQIIGVQDLPAGAEVGYGATFRAERPMRVGVVACGYADGYPRH 297

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-I 341
                         G    + G    ++G+++MDM M D+    +  +G  + ++G D  
Sbjct: 298 AG-----------TGTPVVVGGVRTRLVGRVSMDMLMVDLDPVPAAGIGTPVSLWGQDGP 346

Query: 342 KLDDVALASGTTNYDLLVRIGTRYA 366
            +D+VA A+GT  Y+LL  +  R  
Sbjct: 347 SVDEVAQAAGTIGYELLCALAPRVP 371


>gi|332704045|ref|ZP_08424133.1| Alanine racemase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554194|gb|EGJ51238.1| Alanine racemase [Desulfovibrio africanus str. Walvis Bay]
          Length = 379

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 114/388 (29%), Positives = 171/388 (44%), Gaps = 35/388 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +   L +++DL  + +N+  M + +  AR   V+K +AYG G   +A AL  AG   F 
Sbjct: 3   ITYNMLEVQVDLKRIVDNYRFMRSRA--ARLMPVIKADAYGHGLLPVAKALAAAGADAFC 60

Query: 62  VTSVEEGVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
           V SV E V LR         +    +         + +     + V              
Sbjct: 61  VGSVGEAVTLRRERKPDSGCRVVSLLGPMDREDYAEAVSHEVTLLVGRHEQLELLQVAAS 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVN 175
           S G   P AL+ DTG +RLG S  +              +L L+ SHLA AD+ S     
Sbjct: 121 SAGRMAPVALKFDTGMSRLGFSEADVPRLIQTLTTSPNLRLELVTSHLATADEDSGVDYV 180

Query: 176 SVQLERFRTLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH- 230
             Q ERFR + +         +A+LA+S+GIL  P  HF L RPGI+LYG    +  +H 
Sbjct: 181 LAQAERFRAITAKLSAAGLRFQANLANSAGILAYPELHFDLQRPGIALYGSNPFLGTNHE 240

Query: 231 ----PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
               P++  ++   RI+ +     G  +SYG      RD  +A+ A GYADGY   LS  
Sbjct: 241 ELGRPLKQAMSVTTRILDVHDLPRGGTISYGRTYTAPRDMRVAIMAAGYADGYSRGLSN- 299

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                      G+  +KG   PILG++ M +T  DIT    +  GD + + G      I 
Sbjct: 300 ----------KGQVCLKGSRAPILGRVCMQLTAVDITGREDVHPGDTVHLLGGSGRGYIS 349

Query: 343 LDDVALASGTTNYDLLVRIG-TRYAKFY 369
           ++++A   GT +Y+    +G  R  + Y
Sbjct: 350 VEELAGWWGTISYESFCILGLNR--RVY 375


>gi|323699155|ref|ZP_08111067.1| alanine racemase [Desulfovibrio sp. ND132]
 gi|323459087|gb|EGB14952.1| alanine racemase [Desulfovibrio desulfuricans ND132]
          Length = 374

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 104/388 (26%), Positives = 160/388 (41%), Gaps = 34/388 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     LR++I L  L++N+     +  + R   V+K +AYG G  ++A AL   G   F
Sbjct: 1   MIDYNKLRVRIHLDNLRHNYRLFTKI--HDRVIPVIKSDAYGHGLVEVASALEKDGADTF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI-PVISSVPQLTFYSKLMSCG 119
            V  V E  KLR      RI  L G    ++     T+ I   IS   QL          
Sbjct: 59  AVGFVHEAAKLRRAGCDKRILALLGPISDEDIQSLWTDRILTPISHWAQLRRVLAASEQN 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQ 178
                 L+ DTG  RLG   +EA +              +  SHLA AD+P      ++Q
Sbjct: 119 GPLDIGLKFDTGMRRLGFLPEEAGEVA-ALLKGGNVTPVMATSHLARADEPGREKDVALQ 177

Query: 179 LERFRTLISHYKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTD-----KINKS 229
             RF+  +    G    +EA+LA+S+G ++  N      R GI LYG        +    
Sbjct: 178 ARRFQAALDGLAGAGFVVEANLANSAGGMVHENCRMDSMRLGIGLYGCDPLEGAGEERLP 237

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +   +   A ++ +     GE +SYG      RD+++A+  +GYAD Y   LS     
Sbjct: 238 GKLLPAMEVTAPVMQVHPLKRGESISYGWTFTAERDAMVAIVGVGYADNYSRALSNR--- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS----LSIEVGDYIQIFG----PDI 341
                   G+  + G  VPI G++ M MT  D+T+     + +  GD   + G      +
Sbjct: 295 --------GEMVLHGRRVPIRGRVCMQMTAVDVTELMGEGIEVLPGDEAWLLGGPGEHPV 346

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
             +D+A    T  Y+    +G    + Y
Sbjct: 347 TPEDLAEWGNTITYEAFCLLGQ-NRREY 373


>gi|283768393|ref|ZP_06341305.1| alanine racemase [Bulleidia extructa W1219]
 gi|283104785|gb|EFC06157.1| alanine racemase [Bulleidia extructa W1219]
          Length = 362

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 89/371 (23%), Positives = 167/371 (45%), Gaps = 25/371 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH       +IDL  +K+N   + +        A++K NAYG G  +++  L   G+   
Sbjct: 1   MHRQ--TWFEIDLEKIKHNVQQVQSF-QQKEVMAILKANAYGCGDIQLSKQLEMIGIHFI 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V+SV+E + LR +  Q ++ VL G +    + +   ++     S   +  +++    G+
Sbjct: 58  GVSSVDEALVLRKHGFQGKLLVLGGTNIEDLETLIQNHITVTAYSEEWIEKFTQHDLTGL 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           S    L++DTG NR+G    +      +    +  Q+  I +H   +D    +  + Q +
Sbjct: 118 SI--HLKIDTGMNRIGFDNADEAKKALSHLLDQNAQVEGIFTHYYQSDQDEKN-TARQFK 174

Query: 181 RFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
            F+ ++++     + +   +S   L   +    + R GI+LYG +        +Q  ++ 
Sbjct: 175 DFKKIVTYLNHSFSYIHADNSDASLYFQDNFTNMVRLGIALYGYSTH---HTGLQEALSL 231

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             + I+I+    GE + YG   +   + +IA   IGYADG      G             
Sbjct: 232 YTKPIMIKVVHPGETIGYGATYRAQEEEIIATLPIGYADGLLRINQGR------------ 279

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           K ++ G    I+G+I MD  M  +   +S+E  D ++IFG  I L+ +AL + T +Y+++
Sbjct: 280 KVYVNGQYGTIVGRICMDQCMVKLEQKISLE--DTVEIFGSHISLNQMALETNTISYEII 337

Query: 359 VRIGTRYAKFY 369
             I  R  + Y
Sbjct: 338 SLITPRVTRVY 348


>gi|294677111|ref|YP_003577726.1| alanine racemase [Rhodobacter capsulatus SB 1003]
 gi|294475931|gb|ADE85319.1| alanine racemase [Rhodobacter capsulatus SB 1003]
          Length = 349

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 122/363 (33%), Positives = 188/363 (51%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL A+  NW +++A++     T AVVK ++YGLG  ++A  L  AG + FFV + EE
Sbjct: 6   LRIDLDAVLANWRALDAMTSAATETGAVVKADSYGLGAARVARVLARAGARKFFVAAAEE 65

Query: 68  GVKLRLYTPQARI-FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G  +R    +    FV  G   G  ++I D  L P+++SV Q     + +       + +
Sbjct: 66  GAAVRQALGEGPEIFVFSGHMAGDTEMIGDLGLTPMLNSVEQ---VKRHVDALPGAAFGV 122

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG NRLGL   +       S         L++SHLAC+D+P   +N++QL+ FR + 
Sbjct: 123 QLDTGMNRLGLEPADWAAV---SAELIAAGPKLVMSHLACSDEPEHPMNAMQLKNFRAMT 179

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
               G++ +L+++ GILLGP+YHF +TRPGI LYGG          + VV     ++ IR
Sbjct: 180 DG-LGLKRALSATGGILLGPDYHFDVTRPGIGLYGGLPFETA----RAVVRLSLPVVQIR 234

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               GE V Y       R+S IA  A GYADG     SG  +            +     
Sbjct: 235 TVAPGETVGYANSWTAARESRIATVAAGYADGLSRRFSGKATL-----------WAGDTP 283

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            P++G+++MD+   D+TD   +     ++I GP   +D +A  +GT  Y++L  +G RY 
Sbjct: 284 CPLVGRVSMDLITVDVTDLPEVP--QSLEILGPHQGVDALAEVAGTIGYEILTALGQRYQ 341

Query: 367 KFY 369
           + Y
Sbjct: 342 RSY 344


>gi|289178366|gb|ADC85612.1| Alanine racemase [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 476

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 165/405 (40%), Gaps = 42/405 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNALS----GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             ++ +DL AL++N   +  ++    G      VVK +AYG G    A A    G     
Sbjct: 52  PAQVIVDLAALRDNMRHLVDITNREGGPTEVMGVVKADAYGHGLVPSALAALAGGATWLG 111

Query: 62  VTSVEEGVKLRLYTP---QARIFVLYGIH---PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           V    E + LR       +AR+          P  + I  D +L     +  Q       
Sbjct: 112 VAQAREALALRNAGIGVDRARVLTWVNNPLHAPYDDLIAADVDLSVATLTAIQ-KIAEAA 170

Query: 116 MSCGVSHPYALQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDP-- 170
            + G      ++VDTGF R G     +  A+D      ++ + ++    SHLA AD P  
Sbjct: 171 RAVGKPARVHIKVDTGFGRNGFTLAQIDSAIDLLLPLVDEGVFEIVGQWSHLAVADAPAV 230

Query: 171 --SSHVNSVQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGT 223
                    Q+  F    S  H +GIE     LA+++  L  P  H+ L RPG++LYG  
Sbjct: 231 GEFVEKTDEQIRVFEEFTSRLHARGIEPRIRHLANTAATLSRPEIHYDLVRPGVALYGYE 290

Query: 224 DKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
                  P +      +T +A++  ++   AGE +SYG        +  A+  +GYADG 
Sbjct: 291 ADPAMGTPSKYELRPAMTLQAQLSSVKNVGAGEGLSYGRVYVTDEPTSAAIVPVGYADGI 350

Query: 280 PLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDITDSLS---IEVG 331
             + SG +   S  V   G    +    G     + G++ MD  + D+        + +G
Sbjct: 351 HRSASGFNEAGSKHVNKPGAPVRVMTRDGARIFHVSGRVCMDQFILDLHGDAENMGVHIG 410

Query: 332 DYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 411 DTVELFGPGRGEDYLEPTADDWARAADTISYEIFTCLRNRVPRLY 455


>gi|241190627|ref|YP_002968021.1| alanine racemase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196033|ref|YP_002969588.1| alanine racemase [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|240249019|gb|ACS45959.1| alanine racemase [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240250587|gb|ACS47526.1| alanine racemase [Bifidobacterium animalis subsp. lactis DSM 10140]
 gi|295793616|gb|ADG33151.1| alanine racemase [Bifidobacterium animalis subsp. lactis V9]
          Length = 455

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/405 (24%), Positives = 165/405 (40%), Gaps = 42/405 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNALS----GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             ++ +DL AL++N   +  ++    G      VVK +AYG G    A A    G     
Sbjct: 31  PAQVIVDLAALRDNMRHLVDITNREGGPTEVMGVVKADAYGHGLVPSALAALAGGATWLG 90

Query: 62  VTSVEEGVKLRLYTP---QARIFVLYGIH---PGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           V    E + LR       +AR+          P  + I  D +L     +  Q       
Sbjct: 91  VAQAREALALRNAGIGVDRARVLTWVNNPLHAPYDDLIAADVDLSVATLTAIQ-KIAEAA 149

Query: 116 MSCGVSHPYALQVDTGFNRLGL---SLQEALDFTHNSFNKKLGQLSLIISHLACADDP-- 170
            + G      ++VDTGF R G     +  A+D      ++ + ++    SHLA AD P  
Sbjct: 150 RAVGKPARVHIKVDTGFGRNGFTLAQIDSAIDLLLPLVDEGVFEIVGQWSHLAVADAPAV 209

Query: 171 --SSHVNSVQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGT 223
                    Q+  F    S  H +GIE     LA+++  L  P  H+ L RPG++LYG  
Sbjct: 210 GEFVEKTDEQIRVFEEFTSRLHARGIEPRIRHLANTAATLSRPEIHYDLVRPGVALYGYE 269

Query: 224 DKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
                  P +      +T +A++  ++   AGE +SYG        +  A+  +GYADG 
Sbjct: 270 ADPAMGTPSKYELRPAMTLQAQLSSVKNVGAGEGLSYGRVYVTDEPTSAAIVPVGYADGI 329

Query: 280 PLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDITDSLS---IEVG 331
             + SG +   S  V   G    +    G     + G++ MD  + D+        + +G
Sbjct: 330 HRSASGFNEAGSKHVNKPGAPVRVMTRDGARIFHVSGRVCMDQFILDLHGDAENMGVHIG 389

Query: 332 DYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 390 DTVELFGPGRGEDYLEPTADDWARAADTISYEIFTCLRNRVPRLY 434


>gi|257468004|ref|ZP_05632100.1| alanine racemase, biosynthetic [Fusobacterium ulcerans ATCC 49185]
 gi|317062290|ref|ZP_07926775.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|313687966|gb|EFS24801.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 364

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/370 (27%), Positives = 158/370 (42%), Gaps = 24/370 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              L+ID+  LK N + +  L        V+K N+YG G  + A  L   GV+ F V S+
Sbjct: 2   RAWLEIDMDNLKYNLNKIKELVQGTNVLGVIKANSYGFGAIETAKELSKNGVEIFGVASL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++LR    +  I +L  +   + +I  + N    ISS+ Q+ F     S  ++    
Sbjct: 62  EEAMELREGGIEEEILILGSLFNDEIEIAAEKNFQITISSMRQIEFLE---SNKINAEIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERF 182
           +++DTG  RLG + ++          K   +   I SHL+ AD  S         Q+ +F
Sbjct: 119 IKIDTGMGRLGFTPEKGKKAVDYCIEK-GIKAVGIYSHLSDADGMSDEAYNYTKEQINKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           +    +       + +S GIL   + +   L R GI +YG           + V T + R
Sbjct: 178 KIFEEYKNIKYIHILNSGGILRFNDGFKGNLVRAGICMYGMLGNERMP-GFKRVFTMKTR 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ IR       +SYG   KL      A  AIGYADG     S                 
Sbjct: 237 ILFIRTLEEDSYISYGRTVKLKEGETFATLAIGYADGMKKEFSN-----------KTYAL 285

Query: 302 IKGYMVPILGKITMDMTMFDITD--SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
           I+G   PI+G+I MDM M  I +     I +G    +   DI ++++  +   + +D+L 
Sbjct: 286 IEGEKCPIVGEICMDMCMVKIPESILKKINIGTEAIVIRDDI-IEEI-NSVHKSTWDILT 343

Query: 360 RIGTRYAKFY 369
            IG R  + Y
Sbjct: 344 GIGRRVYRVY 353


>gi|19703748|ref|NP_603310.1| alanine racemase, biosynthetic [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|23813647|sp|Q8RGA2|ALR_FUSNN RecName: Full=Alanine racemase
 gi|19713882|gb|AAL94609.1| Alanine racemase, biosynthetic [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 354

 Score =  233 bits (595), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 164/373 (43%), Gaps = 32/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L    V+ F V ++
Sbjct: 2   RTWIEIDKENLKYNVLKLKEIANNKEILGVVKANAYGLGSIEIAKILKEVEVKLFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L+S  ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELVEATKRGVHVAISSMGQ---LQFLVSKNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + +A        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDDAEKVIEYCKNNNL-NLVGIFSHLSDSDGNTIETKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSS-GILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           + +++        +++S+       +    L R GI +Y  T    K+  ++ + T +++
Sbjct: 178 KKIVNSLNLEYIHISNSAGITNFHNDILGNLVRLGIGMYSFTGN-KKTPYLKNIFTIKSK 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ I+K      VSYG    L  DS  AV  IGYADG    LS            GG   
Sbjct: 237 ILFIKKVKKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGYVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----Y 355
           I  +   I+G I MDMTM  +   +   I++GD + +   DI LD++            +
Sbjct: 286 INNHRCEIIGNICMDMTMIRVPKEIENSIKIGDEVTVINADI-LDNLN-----IPELCVW 339

Query: 356 DLLVRIGTRYAKF 368
           + +  IG R  + 
Sbjct: 340 EFMTGIGRRVKRI 352


>gi|304319746|ref|YP_003853389.1| alanine racemase region protein [Parvularcula bermudensis HTCC2503]
 gi|303298649|gb|ADM08248.1| alanine racemase region protein [Parvularcula bermudensis HTCC2503]
          Length = 382

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 118/375 (31%), Positives = 171/375 (45%), Gaps = 28/375 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFVTS 64
             L +DL AL  N+  +   +G     A VVK NAYGLG   IA  LY   G + FF  +
Sbjct: 8   PTLTVDLGALGRNYDELKRRTGGTSAVAPVVKANAYGLGMHAIARTLYREKGARLFFTAT 67

Query: 65  VEEGVKL-----RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             E + L     R +        +     G   +      +P++S    +  +      G
Sbjct: 68  CREALALLVDGQRFFDDAPPRVYVLNGFDGDRALQEKVGYLPILSDWQDVGDW----VAG 123

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              P  + VD G NRLG+S Q+A              + LI+ HL+ + DP++  N +Q 
Sbjct: 124 GGGPCGISVDIGMNRLGMSFQDAGGL-PQDTRLNPDDVQLIMMHLSHSGDPTAPENELQA 182

Query: 180 ERF----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
           E+F      L   Y   + SL++S GILLG     Q+ R G +LYGG         +  V
Sbjct: 183 EKFFTSGMMLARLYPKAQFSLSNSGGILLGLAPEQQIVRAGYALYGGAPNGLPGQGLDQV 242

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            T EA ++ +R   +GE V Y G  +  R + +AV   GYADG    LS           
Sbjct: 243 TTFEASVLQVRDIGSGESVGYNGTWRAERPTRLAVLGAGYADGIQRALSNR--------- 293

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQIFGPDIKLDDVALASGTTN 354
             G  ++ G + PI G ++MD+   DITD+   +  GD  +I+G  I LD VA  +GT  
Sbjct: 294 --GAVWLGGGLCPIRGAVSMDLVTVDITDAPSPVTRGDKAEIWGAQIDLDLVARQAGTIG 351

Query: 355 YDLLVRIGTRYAKFY 369
           YDLL  +G+R  + Y
Sbjct: 352 YDLLTGVGSRVERIY 366


>gi|218886445|ref|YP_002435766.1| alanine racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|254802361|sp|B8DRL1|ALR_DESVM RecName: Full=Alanine racemase
 gi|218757399|gb|ACL08298.1| alanine racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 372

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 110/375 (29%), Positives = 171/375 (45%), Gaps = 29/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +++ L AL+ N+ ++  +S  A    V+K +AYG G   +A  L  AG   F   +V E 
Sbjct: 10  VRVRLGALRRNFETLRRMSPAA--MPVIKSDAYGHGLLPVARTLEAAGADAFAAGTVGEC 67

Query: 69  VKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            +LR      RI  L G       +     +++P + S  QL   +   + G     AL+
Sbjct: 68  AQLRDGGIPGRIVALLGATDAADAECCVARSIVPAVYSADQLEMLAGRAAPGQQVDIALK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLI 186
            DTG  RLG S  +          + + +  L++SHLA +DDP  S     Q E F  ++
Sbjct: 128 FDTGMARLGFSEADLPALLDRLHARPMLRPVLVMSHLAVSDDPSRSDFTRQQGEAFGRIL 187

Query: 187 ----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-----KINKSHPMQTVVT 237
               + +   + SLA+S+ +L  P  HF + RPGI+LYG        + +    +Q  + 
Sbjct: 188 AGVRADWPAAQGSLANSAALLAHPELHFDVQRPGIALYGANPLRGTAQEHLGDGLQPAMD 247

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A I+ +    AG  +SYG      RD  +A+ A GYAD Y   LSG            
Sbjct: 248 VAAPILQVHPLPAGRSISYGRTFTAPRDMTVAIVATGYADAYSRGLSG-----------K 296

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF---GPDIKLDDVALASGTTN 354
           G   + G  VPILG++ M MT  D+TD   +  GD   +    G  +  D++A   GT +
Sbjct: 297 GAMTVHGRRVPILGRVCMQMTAVDVTDVPGVAAGDDAYLLGGPGEALTPDELADLWGTIS 356

Query: 355 YDLLVRIG--TRYAK 367
           Y++L  +G   R  +
Sbjct: 357 YEVLCLLGMNPRTHR 371


>gi|298252575|ref|ZP_06976369.1| alanine racemase [Gardnerella vaginalis 5-1]
 gi|297532939|gb|EFH71823.1| alanine racemase [Gardnerella vaginalis 5-1]
          Length = 442

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/406 (24%), Positives = 166/406 (40%), Gaps = 44/406 (10%)

Query: 8   RLKIDLTALKNNWHSMNALSGN--------ARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ++ +DL AL++N  ++ A                 VVK   YG G    A A    G   
Sbjct: 16  QVIVDLKALRDNMRTLVARVSQDLQPGQNAPEVMGVVKAGGYGHGLIPSALAALAGGATW 75

Query: 60  FFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
                  E ++LR      +R  +L  +         D     +  SV  +     +   
Sbjct: 76  LGTAQPYEALRLRAVGIDSSRCHILTWLTSAPTTRFADLITADIDISVGSIDSLDAVAFA 135

Query: 119 ----GVSHPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPS 171
               G      ++VDTGF R G + +    AL+      ++ + ++    SHLA AD P 
Sbjct: 136 ARKLGKPARVHVKVDTGFGRNGFTPEGFCAALEKLQQYSSEGVIEVIGQWSHLAVADSPD 195

Query: 172 SH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
                     Q+++F       K          LA+++  L  P   F+L RPGI LYG 
Sbjct: 196 VPEFVDATDRQIQQFHEFTKRMKEASVAPKIRHLANTAATLNRPEIRFELVRPGIGLYGY 255

Query: 223 TDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                    +++ +Q  +T +A++  ++    G  +SYG       ++  A+  +GYADG
Sbjct: 256 EPDPAMGNSQTYGLQPAMTLQAQLGTVKTVEEGHGISYGRTYLTPNNTSTAIVPLGYADG 315

Query: 279 YPLTLSGLDSEHSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDI-TDSLSIEV-- 330
              + SG D + +  V   GG   +    G   V + G++ MD  + D+  D+  + V  
Sbjct: 316 ILRSASGFDMQGARHVNKPGGPVRVETKNGARIVNVSGRVCMDQFIVDLKGDASELGVLE 375

Query: 331 GDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G+ + +FGP       +   DD A A+GT +Y+++  IG R  + Y
Sbjct: 376 GNTVTLFGPGRGLEFAEPTADDWAEAAGTISYEIMTGIGARVPRLY 421


>gi|326560246|gb|EGE10634.1| alanine racemase [Moraxella catarrhalis 7169]
 gi|326566436|gb|EGE16586.1| alanine racemase [Moraxella catarrhalis BC1]
 gi|326570243|gb|EGE20288.1| alanine racemase [Moraxella catarrhalis BC8]
 gi|326570980|gb|EGE21004.1| alanine racemase [Moraxella catarrhalis BC7]
          Length = 380

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 94/379 (24%), Positives = 165/379 (43%), Gaps = 37/379 (9%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + I   AL +N   +   L    +  A+VK +AYG G +   PAL +     F V  + E
Sbjct: 6   ITIHPNALTHNLQIIKSQLDRTTKVLAMVKADAYGHGIDATIPALIH--ADGFGVACLSE 63

Query: 68  GVKLRL-----YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            + ++         +  + +       + K+  D +   +I    QL +    +      
Sbjct: 64  AMAVKQVLDGMNHKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLIWALSHRPKQDQF 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S  +N+ Q+ 
Sbjct: 124 CHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSHPLNAQQIS 181

Query: 181 RFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           +F   ++  +         L +S+GI    + H    R GI+LYG     +   K+  + 
Sbjct: 182 KFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQSAKALNLM 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP             
Sbjct: 242 PAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR------------ 289

Query: 294 VFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
           V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G    +D+VA+
Sbjct: 290 VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDSPTIDEVAM 348

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            +GT  Y+L+ R+ TR  +
Sbjct: 349 CAGTIGYELMCRLTTRPKR 367


>gi|313839518|gb|EFS77232.1| alanine racemase [Propionibacterium acnes HL086PA1]
 gi|315079051|gb|EFT51058.1| alanine racemase [Propionibacterium acnes HL053PA2]
 gi|327334461|gb|EGE76172.1| alanine racemase [Propionibacterium acnes HL097PA1]
          Length = 352

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 78/359 (21%), Positives = 142/359 (39%), Gaps = 24/359 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIF 81
           M   +G+ +    VK +AYG G  +++  +          V +V EG +L        I 
Sbjct: 1   MRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAEGQELVEAGITLPIL 60

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQ 140
            L    P        + +   +     L   SK     G++    + VD+G  R+GL  +
Sbjct: 61  KLSPADPWDMDAAITSGMRLTVVDFDTLEAVSKAAVRLGITARIHIAVDSGMGRIGLRPE 120

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPS-SHVNSVQLERFRTLISHYK----GIEAS 195
                T  +   +  ++  + +HL  +D P        +++ F T ++  +         
Sbjct: 121 HLAQLTAAADRTERVEVEGVFTHLPMSDVPEGEEFTRHEIDAFMTAVTQTQTDRGPFPLV 180

Query: 196 LASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGEL 253
             ++SG +LG +     + R GI  YG     + +   +   ++  + +  ++    G+ 
Sbjct: 181 HLANSGAILGHDLGKTSMVRAGIVGYGYDPDPHANRADLHPALSWISHVTFVKTINPGDA 240

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           + YG     +  + IA   +GYADG    LS             G   I G + PI+G+I
Sbjct: 241 IGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGHVLIGGSVHPIVGRI 289

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
            MD  M D+    S+ VGD + + G      +  DD+A   GT +Y++   I  R  + 
Sbjct: 290 CMDQFMVDLGPDSSVTVGDEVVLIGTQGDEVLTADDMAELLGTISYEITCAISKRVDRR 348


>gi|315656254|ref|ZP_07909145.1| D-alanine racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
 gi|315493256|gb|EFU82856.1| D-alanine racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
          Length = 442

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/440 (22%), Positives = 171/440 (38%), Gaps = 84/440 (19%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S   +R  ++L+A + N   M   + +++  A+VK NAYG G E++A A   AG +   V
Sbjct: 7   SQWPVRAVVNLSAYQENLAQMRRFAPHSQQMAIVKANAYGHGIERMALAALGAGTEWLGV 66

Query: 63  TSVEEGVKLRLYTPQ----------------------------------ARIFVLYGIHP 88
               E  +LR Y  +                                   RI        
Sbjct: 67  AKASEAFRLRKYLDKHGVPRDHLVDTPTSAMMRSRLYQTAAMGLPSATRPRILTWLYAPH 126

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTH 147
                +  + +   +S++ QL   S+   + G      L+VDTG  R G + ++      
Sbjct: 127 TDLLPVVKSEIDISVSTLDQLDQVSRACDAAGKRARLHLKVDTGLCRAGATDEDFPVLCK 186

Query: 148 NSFNKK---LGQLSLIISHLACADDPSSH---VNSVQLERFR--TLISHYKGIEASLAS- 198
            +  ++   L ++S + SHLA AD+ ++        QL+ F     ++   G+   L   
Sbjct: 187 LARARERAGLVEVSAVWSHLARADEDTAAAEAFTKSQLKAFDEAWEVAQEAGLRPQLRHI 246

Query: 199 --SSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGE 252
             ++GI+  P  H+ L R GIS YG +            ++ V+  E  ++ +++   G 
Sbjct: 247 AATAGIIWYPESHYDLVRVGISGYGLSPNPEIASSWQLGVRPVMRLETNVVQVKRVEKGA 306

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            VSYGG+        + +  +GYADG                   G+ +I+G   PI+G+
Sbjct: 307 AVSYGGEWVAPGPRWLGLLPVGYADGLHRLAKNR-----------GETWIRGRRAPIVGR 355

Query: 313 ITMDMTMFDITDSLS---------IEVGDYIQIFGPD--------------IKLDDVALA 349
           I MD  + D+  ++          +E G+   IFG                   DD A  
Sbjct: 356 IPMDQIVVDLGPAVDDTGTSVPCPVEPGELAIIFGDPKDRLLGGIPGVPTLPTADDWAKW 415

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T NY+++  I     + Y
Sbjct: 416 TDTINYEVITSISPNVPRVY 435


>gi|298345414|ref|YP_003718101.1| alanine racemase [Mobiluncus curtisii ATCC 43063]
 gi|298235475|gb|ADI66607.1| alanine racemase [Mobiluncus curtisii ATCC 43063]
          Length = 442

 Score =  233 bits (594), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 172/440 (39%), Gaps = 84/440 (19%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S   +R  ++L+A + N   M   + +++  A+VK NAYG G E++A A   AG +   V
Sbjct: 7   SQWPVRAVVNLSAYQENLAQMRRFAPHSQQMAIVKANAYGHGIERMALAALGAGTEWLGV 66

Query: 63  TSVEEGVKLRLYTPQ----------------------------------ARIFVLYGIHP 88
               E  +LR Y  +                                   RI     +  
Sbjct: 67  AKASEAFRLRKYLDKHGVPRDHLVDTPTSAMMRSRLYQTAAMGLPSATRPRILTWLYVPH 126

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTH 147
                +  + +   +S++ QL   S+   + G      L+VDTG  R G + ++      
Sbjct: 127 TDLLPVVKSEIDISVSTLDQLDQVSRACDAAGKRARLHLKVDTGLCRAGATDEDFPVLCK 186

Query: 148 NSFNKK---LGQLSLIISHLACADDPSSH---VNSVQLERFR--TLISHYKGIEASLAS- 198
            +  ++   L ++S + SHLA AD+ ++        QL+ F     ++   G+   L   
Sbjct: 187 LARARERAGLVEVSAVWSHLARADEDTAAAEAFTKSQLKAFDEAWEVAQEAGLRPQLRHI 246

Query: 199 --SSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGE 252
             ++GI+  P  H+ L R GIS YG +            ++ V+  E  ++ +++   G 
Sbjct: 247 AATAGIIWYPESHYDLVRVGISGYGLSPNPEIASSWQLGVRPVMRLETNVVQVKRVEKGA 306

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            VSYGG+        + +  +GYADG                   G+ +IKG   PI+G+
Sbjct: 307 AVSYGGEWVAPGPRWLGLLPVGYADGLHRLAKNR-----------GETWIKGRRAPIVGR 355

Query: 313 ITMDMTMFDITDSLS---------IEVGDYIQIFGPD--------------IKLDDVALA 349
           I MD  + D+  ++          +E G+   IFG                   DD A  
Sbjct: 356 IPMDQIVVDLGPAVDDTGTSVPCPVEPGELAIIFGDPKDRLLGGIPGVPALPTADDWAEW 415

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T NY+++  I     + Y
Sbjct: 416 TDTINYEVITSISPNVPRVY 435


>gi|284043349|ref|YP_003393689.1| alanine racemase [Conexibacter woesei DSM 14684]
 gi|283947570|gb|ADB50314.1| alanine racemase [Conexibacter woesei DSM 14684]
          Length = 392

 Score =  233 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 30/379 (7%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +++L A++ N   +    G +    A VK N YG G  + A A    G     V +  E
Sbjct: 19  ARVNLAAIERNCALIRREIGADVALCAAVKANGYGHGAVQSARAAVAGGATWLAVATGGE 78

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY------SKLMSCGVS 121
             +LR     AR+ VL  + P +     D +   V  +   +             +    
Sbjct: 79  AAELRAARLDARLIVLGALAPEELDEALDADADVVAWNERFVEQLATAAGARAAATAAPP 138

Query: 122 HPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
               L++D G  RLG     E L            +L+  ++H  CAD+    +   QL 
Sbjct: 139 IRVHLKLDVGMGRLGTRDADELLRVADRVAAAPGLELAGAMTHFPCADEDV-ALTRGQLA 197

Query: 181 RF----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQT 234
            F      L + + G+    A+S+  L  P     L R GI++YG +   +   +H ++ 
Sbjct: 198 AFTAFGERLRAAHPGVLLHAANSAAALALPESRLDLVRCGIAVYGLSPWEDDATAHGLEP 257

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +   + +  ++   AGE V YG + +    + IA   IGY DG                
Sbjct: 258 ALELRSWVAALKPLAAGETVGYGARFRAQAPTWIATLPIGYGDGVRRG-----------W 306

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
              G   + G   P++G+++MD    D+     + +GD   + G      +  ++VA   
Sbjct: 307 ERDGVALLGGRRRPLVGRVSMDNVTVDVGPEPGVALGDPAILIGAAGEERLTAEEVARRL 366

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT NY+++  +  R  + Y
Sbjct: 367 GTINYEVVTALSARVVRAY 385


>gi|296113256|ref|YP_003627194.1| alanine racemase Alr [Moraxella catarrhalis RH4]
 gi|295920950|gb|ADG61301.1| alanine racemase Alr [Moraxella catarrhalis RH4]
          Length = 380

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 95/379 (25%), Positives = 166/379 (43%), Gaps = 37/379 (9%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + I   AL +N   +   L    +  A+VK +AYG G +   PAL +     F V  + E
Sbjct: 6   ITIHPNALTHNLQIIKSQLDRTTKVLAMVKADAYGHGIDATIPALIH--ADGFGVACLSE 63

Query: 68  GVKLRLYT-----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSCGV 120
            + ++         +  + +       + K+  D +   +I    QLT+    +      
Sbjct: 64  AMAVKQVLDGMNVKKPIVLIEGAFSLDEWKVAIDHDFGCLIHHENQLTWALSHRPKQDQF 123

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
            H   L+ +TG +RLG +    +    +  +       ++ SH ACADD S  +N+ Q+ 
Sbjct: 124 CHTIWLKYNTGMSRLGFNDDHIITAAKSLADAG--YRLILTSHFACADDKSHPLNAQQIS 181

Query: 181 RFRTLISHYKGIEAS----LASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQ 233
           +F   ++  +         L +S+GI    + H    R GI+LYG     +   K+  + 
Sbjct: 182 KFDQALACIRSFAPDTLASLCNSAGIFNFKHQHHDWVRAGIALYGSKPITDQSAKALNLM 241

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T  A+++ I    AG+ + Y       +   IAV +IGY DGYP             
Sbjct: 242 PAMTLSAQVMAIHTLAAGDSIGYSALWAAQKPHQIAVVSIGYGDGYPR------------ 289

Query: 294 VFLGGKGFI-----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVAL 348
           V +G K  +       ++  I+G++ MDM M DI D L I +   + ++G    +D+VA+
Sbjct: 290 VVMGAKVSVTDTSGNRHLCDIIGRVAMDMFMIDI-DGLDIAINTPVVLWGDSPTIDEVAM 348

Query: 349 ASGTTNYDLLVRIGTRYAK 367
            +GT  Y+L+ R+ TR  +
Sbjct: 349 CAGTIGYELMCRLTTRPKR 367


>gi|304390969|ref|ZP_07372921.1| alanine racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
 gi|304325852|gb|EFL93098.1| alanine racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
          Length = 442

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 171/440 (38%), Gaps = 84/440 (19%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S   +R  ++L+A + N   M   + +++  A+VK NAYG G E++A A   AG +   V
Sbjct: 7   SQWPVRAVVNLSAYQENLAQMRRFAPHSQQMAIVKANAYGHGIERMALAALGAGTEWLGV 66

Query: 63  TSVEEGVKLRLYTPQ----------------------------------ARIFVLYGIHP 88
               E  +LR Y  +                                   RI        
Sbjct: 67  AKASEAFRLRKYLDKHGVPRDHLVDTPTSAMMRSRLYQTAAMGLPSATRPRILTWLYAPH 126

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTH 147
                +  + +   +S++ QL   S+   + G      L+VDTG  R G + ++      
Sbjct: 127 TDLLPVVKSEIDISVSTLDQLDQVSRACDAAGKRARLHLKVDTGLCRAGATDEDFPVLCK 186

Query: 148 NSFNKK---LGQLSLIISHLACADDPSSH---VNSVQLERFR--TLISHYKGIEASLAS- 198
            +  ++   L ++S + SHLA AD+ ++        QL+ F     ++   G+   L   
Sbjct: 187 LARARERAGLVEVSAVWSHLARADEDTAAAEAFTKSQLKAFDEAWEVAQEAGLRPQLRHI 246

Query: 199 --SSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGE 252
             ++GI+  P  H+ L R GIS YG +            ++ V+  E  ++ +++   G 
Sbjct: 247 AATAGIIWYPESHYDLVRVGISGYGLSPNPEIASSWQLGVRPVMRLETNVVQVKRVEKGA 306

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            VSYGG+        + +  +GYADG                   G+ +IKG   PI+G+
Sbjct: 307 AVSYGGEWVAPGPRWLGLLPVGYADGLHRLAKNR-----------GETWIKGRRAPIVGR 355

Query: 313 ITMDMTMFDITDSLS---------IEVGDYIQIFGPD--------------IKLDDVALA 349
           I MD  + D+  ++          +E G+   IFG                   DD A  
Sbjct: 356 IPMDQIVVDLGPAVDDTGTSVPCPVEPGELAIIFGDPKDRLLGGIPGVPALPTADDWAEW 415

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T NY+++  I     + Y
Sbjct: 416 TDTINYEVITSISPNVPRVY 435


>gi|121611251|ref|YP_999058.1| alanine racemase [Verminephrobacter eiseniae EF01-2]
 gi|166969436|sp|A1WQY3|ALR_VEREI RecName: Full=Alanine racemase
 gi|121555891|gb|ABM60040.1| alanine racemase [Verminephrobacter eiseniae EF01-2]
          Length = 371

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 90/378 (23%), Positives = 150/378 (39%), Gaps = 32/378 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ +I  +AL+ N   +     +A+  AVVK NAYG G  ++  +L   G   F +  
Sbjct: 3   RPIQARIHSSALQANLRRVRQSVPDAKVWAVVKANAYGHGIARVFESLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E   LR    +  I +L G+  P   ++     L  V+    Q+   +   S    H 
Sbjct: 61  LAEAQGLRGLGWRGPILLLEGVFEPRDLELCSRLGLWHVVHCDEQIDMLAAHRSQAPQHV 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           + L+++ G NRLG + Q                   +++H + AD P     + QL  F 
Sbjct: 121 F-LKLNAGMNRLGFAPQRYRSAWARLGALAQVDEISLMAHFSDADGPRGI--APQLAAFV 177

Query: 184 TLISHYKGIEASLASSSGILLGPNY--HFQLTRPGISLYGGTDKINKSHPMQT----VVT 237
                  G  +   S++ +    +        R GI LYG                  +T
Sbjct: 178 RATQDLPGARSLCNSAATLRHAADASVRADWVRAGIVLYGSAPDFPGHDAGHWGLQPAMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
              R+I +++  AG+ V YG +        I VAA GYADGYPL               G
Sbjct: 238 LATRLIGVQQLQAGDTVGYGARFVAPGPMAIGVAACGYADGYPLHCG-----------TG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEV----GDYIQIFGPD-----IKLDDVAL 348
               + G    ++G+++MDM   D+T      +    G  + ++G       + +D+VA 
Sbjct: 287 TPVLVDGIRTRVVGRVSMDMLTVDLTPLQRAGLQPGFGSEVTLWGRASSGAVLSIDEVAQ 346

Query: 349 ASGTTNYDLLVRIGTRYA 366
           A GT  Y+L+  +  R  
Sbjct: 347 AGGTLGYELMCALAQRVP 364


>gi|308447430|ref|XP_003087428.1| hypothetical protein CRE_20666 [Caenorhabditis remanei]
 gi|308256594|gb|EFP00547.1| hypothetical protein CRE_20666 [Caenorhabditis remanei]
          Length = 326

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 98/339 (28%), Positives = 154/339 (45%), Gaps = 22/339 (6%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKII 94
           +VK NAYG G +    AL       F V  + E +++R    Q  I ++ GI    E I 
Sbjct: 1   MVKANAYGHGVKDCLAALNA--TDAFGVACLAEALEIRALGYQQPITLIEGIFSADEMIS 58

Query: 95  F-DTNLIPVISSVPQLTFYSKLMSC--GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
             + NL  V+   PQL +                +++++G NRLG    E ++   +   
Sbjct: 59  VLENNLEIVVHHQPQLAWLRAHKKQYIDKGLKVWVKLNSGMNRLGFKFAEIIEVIQSLKA 118

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           +    +  +  H A AD     +N  Q ++F  + +  + I AS  +S+ I   P  +F 
Sbjct: 119 EGFTCV--LAMHFANADADHHPLNEQQKDQFLQVKAACEPILASCCNSAAIFKWPELNFD 176

Query: 212 LTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLI 268
             RPGI LYG +   ++S     ++ V++  A II +    AGE V YG       +  I
Sbjct: 177 FVRPGIMLYGASPFADRSVAELDIKPVMSFTAEIIALNHIQAGESVGYGSTFFSKNEMDI 236

Query: 269 AVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSI 328
           A+ +IGY DGYP T                   I G M  I+G++ MDM   D+T     
Sbjct: 237 AIVSIGYGDGYPRTF-----------PQQNYVSINGQMTAIIGRVAMDMIAIDVTGL-DA 284

Query: 329 EVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
            +G  ++++G D  +DDVA A+GT  Y+LL R+  R  +
Sbjct: 285 PLGTVVELWGKDRLVDDVAAANGTIGYELLCRMSARPIR 323


>gi|227872694|ref|ZP_03991023.1| alanine racemase [Oribacterium sinus F0268]
 gi|227841454|gb|EEJ51755.1| alanine racemase [Oribacterium sinus F0268]
          Length = 360

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 97/362 (26%), Positives = 171/362 (47%), Gaps = 29/362 (8%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             ++L+ L++N  ++ + L    +  AVVK +AYG G  ++A A+       F V ++EE
Sbjct: 13  AVVELSYLQDNIKAVKSHLRKGMQFCAVVKMDAYGHGIVEVARAVEEE-CALFGVATIEE 71

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
           G+ LR       I +L  +  GQ + ++  +++P + +  Q     +     G S P  L
Sbjct: 72  GIILRKGGITTPILILGVVPKGQYRSLWHYDIMPSLFTREQGEALSAISKKEGKSLPCHL 131

Query: 127 QVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            +DTG  R+G+ +++  A++     F+    ++  I SH AC DD       +Q  RF  
Sbjct: 132 ALDTGMGRIGIQVEKEGAVELGLELFSLSGIEICGIFSHFACCDDRDKSYTEMQERRFAD 191

Query: 185 LIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVT 237
            +     +GI+     L++S+GIL G    + + R GI++YG      + +  P++ V++
Sbjct: 192 YLRALEERGIKLPLCHLSNSAGILEGRGVQYDMVRDGIAMYGLYPSKDMERKLPLKQVLS 251

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +A+I  I++  +GE +SYG          +A   +GY DGYP  LS             
Sbjct: 252 WKAKISHIKEVPSGEAISYGASFVTREPMRVATVPVGYGDGYPRVLSN-----------K 300

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
            K  + G   PILG++ MD  M D++ +   E+   + + G     +I L D     G  
Sbjct: 301 AKVLVGGKPCPILGRVCMDQFMIDVSHT-EAEIFQEVTLLGQEGEEEISLYDWEEW-GVF 358

Query: 354 NY 355
           +Y
Sbjct: 359 SY 360


>gi|300172538|ref|YP_003771703.1| alanine racemase [Leuconostoc gasicomitatum LMG 18811]
 gi|299886916|emb|CBL90884.1| alanine racemase [Leuconostoc gasicomitatum LMG 18811]
          Length = 370

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 81/375 (21%), Positives = 152/375 (40%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +++I   ALK+N   +   SG  +    VK NAYGLG    + A    GV    V  
Sbjct: 7   RPTQIEISKKALKHNVAVVKQTSGADKIFLAVKSNAYGLGLVPTSKAAVAGGVYGLAVAV 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR       I VL        +++   +++  + S+  L   ++ ++       
Sbjct: 67  IDEALALRHERITEPILVLGISQAKYAELMAVQHIMATVVSLSWLKEAAQSLTGEQRLQV 126

Query: 125 ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           +L VDTG  R+G   +E  A   T+   +K +     + +H A +D   +    +QL+R+
Sbjct: 127 SLGVDTGMGRIGFRTRESLAQAITYLQAHKDIFDYVGLATHFAESDSVQTDYFYMQLKRW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
             +       +      S + +        ++ R G  LYG      +      +Q V++
Sbjct: 187 HDITDGLPEPKYYHVANSGAAMYHADEVPHEVIRVGTVLYGVEPSRGELADGKNLQPVMS 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +  +++  AGE +SY  +   + D  I    IGY DG+   +SG            
Sbjct: 247 LRSEMNFVKQLPAGEGISYSHKYTTSSDEWIGTVPIGYGDGWLRKMSGFS---------- 296

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G   PI+G++ MD  M  +     +  G  + + G D      L+DVA  +   
Sbjct: 297 --VIVDGQYAPIVGQVAMDQLMIKLPHEYPV--GTKVTLIGKDGDLENTLEDVAQHANLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            ++++  +  R  + 
Sbjct: 353 PWEIMTGMQDRVHRI 367


>gi|15645557|ref|NP_207733.1| alanine racemase, biosynthetic (alr) [Helicobacter pylori 26695]
 gi|3913027|sp|O25595|ALR_HELPY RecName: Full=Alanine racemase
 gi|2314079|gb|AAD07986.1| alanine racemase, biosynthetic (alr) [Helicobacter pylori 26695]
          Length = 377

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 87/381 (22%), Positives = 162/381 (42%), Gaps = 32/381 (8%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++D  +L++N+ ++ ++   +A   AVVK NAYG G  K +      G     V +++E
Sbjct: 8   VEVDTASLRHNFSAVKSIVPKDACVMAVVKANAYGAGAIKASEIFLQEGANYLGVATLDE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            ++LR +  +  I +L         ++ D +L  +I S+ Q   +S++           +
Sbjct: 68  ALELRSHFSKTPILILGYSPNANASMLVDNDLSAMIFSLEQAEVFSQMALKSQKRLKVHI 127

Query: 127 QVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLGL    ++++        K  ++  I +HL+ AD         Q++ F   
Sbjct: 128 KIDTGMHRLGLEPNFKSIETIKKIRALKGLEIEGIFTHLSNADAKIKTHAKNQMKAFNAF 187

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQTVV 236
           +      +         +S+GIL   N +      L RPGI LYG            T++
Sbjct: 188 LEQLLDQKIEFQYRHAYNSAGILSLCNGNENRLLNLYRPGIMLYGFYPSNGMKESCPTIL 247

Query: 237 ----TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +A+I+ IR    GE + YG       ++L+ V A+GYADG    L         
Sbjct: 248 KNVISLKAQIVQIRSVKKGEFIGYGEHFYTNEETLVGVLALGYADGLMRALGNRI----- 302

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                 +  I   + P++GK+ MD     + +    + GD + +FG          ++  
Sbjct: 303 ------QVAINNQLAPLIGKVCMDQCFVKLNNI-QAKEGDEVILFGDKSAKANDASEIXA 355

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
              T  Y+ +  +  R  + Y
Sbjct: 356 LLNTIAYETISTLSKRLERVY 376


>gi|224826258|ref|ZP_03699360.1| alanine racemase [Lutiella nitroferrum 2002]
 gi|224601359|gb|EEG07540.1| alanine racemase [Lutiella nitroferrum 2002]
          Length = 379

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 24/364 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I L AL+ N+     L+G AR  AV+K +AYG G  ++A AL +     F +   ++ 
Sbjct: 7   VEIHLPALRRNYALAKTLAGAARVWAVLKSDAYGHGLTRVALALPD--ADGFALIQPDDA 64

Query: 69  VKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V LR     A+I +L G    G   I     L  V+ S  Q      L+         ++
Sbjct: 65  VTLRHAGIGAQILLLEGALEEGDVDIAAQHRLDLVLRSEHQ---LQWLLQKARPVTVWVK 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           V+TG NR G + + AL            +++ +++H ACAD   + +      RF  ++ 
Sbjct: 122 VNTGMNRFGFTPERALAVVRQLQATPFCRVAGLMTHFACADQLGTPL-DEPWRRFLQVVE 180

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT----VVTAEARII 243
              G+  + A+S+ +L     H  + R G  LY        +         V+   ARI+
Sbjct: 181 A-TGLPYTAANSAALLREARTHGAVARVGGLLYNNNPFYPDTRLWPMAAAPVMRFAARIV 239

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +    AG+ + YG       D  I +   GY DGYP +              G    + 
Sbjct: 240 HVSTLQAGDSIGYGAAFTARHDMRIGIVGAGYGDGYPRSA-----------PSGTPVLVN 288

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLLVRIG 362
           G    ++G++ M++   D++    ++VGD + ++G P +  D++A   GT + +L   + 
Sbjct: 289 GRRAALVGRVAMNVLAIDLSALPEVQVGDEVTLWGAPGLSCDEIAWRCGTISEELQCALT 348

Query: 363 TRYA 366
           +R  
Sbjct: 349 SRVP 352


>gi|332283733|ref|YP_004415644.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
 gi|330427686|gb|AEC19020.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
          Length = 376

 Score =  233 bits (593), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 88/386 (22%), Positives = 151/386 (39%), Gaps = 37/386 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMN---------ALSGNARTAAVVKDNAYGLGCEKIAPALYNA 55
             +   + +++L +N   +          A     R  AV+K NAYG G ++        
Sbjct: 3   RPISATVSVSSLSHNLQRVANGLQQSCNAAKPLRPRVWAVIKANAYGHGIDQAVQGFAQ- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
                 +  + E V+ R       I +L G   PG   ++ +  L   +    QL   + 
Sbjct: 62  -ADGLAMLDLNEAVRCRELGWTKPILLLEGFFEPGDIAVLDEYCLTTSLHCQEQLEMLAA 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
                      ++++ G NRLG S     +A         + +      +SH A ADD  
Sbjct: 121 AKPAN-PLNAFVKLNVGMNRLGFSEYAFPDAYRQAQQLQQQGILASVGKMSHFARADDSP 179

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLG-----PNYHFQLTRPGISLYGGTDKI 226
                 QL+ F  +     G  +   S++ +  G      +   Q  RPGI LYG +   
Sbjct: 180 VTTTQ-QLQVFNRMTQGLPGPFSVCNSAASLTAGLWTTVSSDEEQWVRPGICLYGSSPFE 238

Query: 227 NK---SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           ++   +  ++  +T  A++I +R+   G  V YG     +    I + A GYADGYP   
Sbjct: 239 DRLPDALGLRPAMTLAAQLISVREIPRGAGVGYGHVFTASDAMRIGIVACGYADGYPRHA 298

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIK 342
                        G    + G    ++G+++MDM   D+T      VG  + ++G     
Sbjct: 299 G-----------TGTPICVDGVRTRLVGRVSMDMLAVDLTPVPQAGVGSPVVLWGEGGPS 347

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKF 368
           +D+VA A+GT  Y+LL  +  R  + 
Sbjct: 348 VDEVAQAAGTIGYELLCAVAPRVPRV 373


>gi|296328108|ref|ZP_06870641.1| alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154779|gb|EFG95563.1| alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 354

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 162/373 (43%), Gaps = 32/373 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L    V+ F V ++
Sbjct: 2   RTWIEIDKENLKYNVLKLKEIANNKEVLGVVKANAYGLGSIEIAKILKEVEVKLFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +     +     V  ++  +     L+S  ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDEL---VEATKRGVHVAISSMEQLQFLVSKNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + +A        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDDAEKVIEYCKNNNL-NLVGIFSHLSDSDGNTIETKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSS-GILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           + + +        +++S+       +    L R GI +Y  T    K+  ++ + T +++
Sbjct: 178 KKIANSLNLEYIHISNSAGITNFHNDILGNLVRLGIGMYSFTGN-KKTPYLKNIFTIKSK 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I+ I+K      VSYG    L  DS  AV  IGYADG    LS            GG   
Sbjct: 237 ILFIKKVKKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGYVL 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----Y 355
           I  +   I+G I MDMTM  +   +   I++GD + +   DI LD++            +
Sbjct: 286 INNHRCEIIGNICMDMTMIRVPKEIENSIKIGDEVTVINADI-LDNLN-----IPELCVW 339

Query: 356 DLLVRIGTRYAKF 368
           + +  IG R  + 
Sbjct: 340 EFMTGIGRRVKRI 352


>gi|293606270|ref|ZP_06688632.1| alanine racemase [Achromobacter piechaudii ATCC 43553]
 gi|292815335|gb|EFF74454.1| alanine racemase [Achromobacter piechaudii ATCC 43553]
          Length = 375

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 93/385 (24%), Positives = 156/385 (40%), Gaps = 40/385 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   + ++AL +N  ++                   AV+K NAYG G E+        
Sbjct: 3   RPISATVSVSALAHNLATVRRHLEQTAAAVGGLPPSIWAVIKANAYGHGIEQAVTGFSK- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
             Q   +  ++E V+ R       I +L G   P    +I   +L   + +  QL   ++
Sbjct: 62  -AQGLAMLDLDEAVRCREAGWGGPILLLEGFFKPADLDLIDRYHLSTTVHNREQLDMLAR 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQE---ALDFTHNSFNKKLGQLSLIISHLACADDPS 171
                      L++++G NRLG S      A +       +        ++H ACAD P 
Sbjct: 121 ARFSRR-VDIMLKLNSGMNRLGFSPASYPAAFERAMLLQQQGTLGSVGKMTHFACADGPQ 179

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPN------YHFQLTRPGISLYGGTDK 225
               + QL  F ++     G   S+ +S+  L   +            RPGI LYG +  
Sbjct: 180 G--VTEQLALFNSVTHKLPG-TISVCNSAATLRFADIAVSSPTQTHWVRPGICLYGASPF 236

Query: 226 INK---SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT 282
            +    S  ++  +T  + II +++  AG+ V YG   +  R   I + A GYADGYP  
Sbjct: 237 ADAQAASFGLKPALTLSSEIIAVQELKAGDSVGYGAIFRAERAMRIGIVACGYADGYPRH 296

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-I 341
                         G    + G    ++G+++MDM + D+    +  VG  + ++G D  
Sbjct: 297 A-----------TTGTPVVVAGIRTQLVGRVSMDMLIVDLDPVPAAGVGTPVVLWGEDGP 345

Query: 342 KLDDVALASGTTNYDLLVRIGTRYA 366
            +DDVA A+GT  Y+LL  +  R  
Sbjct: 346 SVDDVAQAAGTIGYELLCALAPRVP 370


>gi|20140854|sp|Q9KHL7|VANTG_ENTFA RecName: Full=Amino-acid racemase; AltName: Full=Vancomycin G-type
           resistance protein VanT
 gi|7960293|gb|AAF71283.1|AF253562_7 racemase [Enterococcus faecalis]
          Length = 711

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 159/372 (42%), Gaps = 28/372 (7%)

Query: 9   LKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+I+L  L++N +++  A+S      AVVK  AYG G  ++       GV    V +++E
Sbjct: 347 LEINLNNLEHNVNTLQKAMSPKCELMAVVKAEAYGHGMYEVTTYFEPIGVFYLAVATIDE 406

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           G++LR Y   + I +L    P + K   +     +  ++    +   L   G      ++
Sbjct: 407 GIRLRKYGIFSEILILGYTSPSRAK---ELCKFELTQTLIDYRYLLLLNKQGYDIKAHIK 463

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA--CADDPSSHVNSVQLERFRTL 185
           +DTG +RLG S ++        F K +    +     A    ++      +  +  F  +
Sbjct: 464 IDTGMHRLGFSTEDKDKILAAFFLKHIKVAGIFTHLCAADSLEEKEVAFTNKPIGSFYKV 523

Query: 186 ISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA--- 238
           +   K     I      +S  L        + + G++LYG     N    ++T + A   
Sbjct: 524 LDWPKSSGLNIPKVNIQTSYGLWNIQSWNVIYQSGVALYGVLRSTNDKTKLETDLRACSF 583

Query: 239 -EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +A+++LIRK   G  V Y      TRDSLIA+  IGYADG+P  LS             
Sbjct: 584 LKAKVVLIRKIKQGGSVGYSRAFTATRDSLIAILPIGYADGFPRNLS----------CGN 633

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               I G   PI+GKI MD    D+TD  +++ G    + G     +I    VA ++ + 
Sbjct: 634 SYVLIGGRQAPIVGKICMDQLAVDVTDIPNVKTGSIATLIGKDGKEEITAPMVAESAESI 693

Query: 354 NYDLLVRIGTRY 365
             +LL R+  R 
Sbjct: 694 TNELLSRMEHRL 705


>gi|283797687|ref|ZP_06346840.1| alanine racemase [Clostridium sp. M62/1]
 gi|291074583|gb|EFE11947.1| alanine racemase [Clostridium sp. M62/1]
          Length = 422

 Score =  232 bits (592), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 88/378 (23%), Positives = 156/378 (41%), Gaps = 29/378 (7%)

Query: 8   RLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+IDL  +++N+ ++ +++    +    VK NAYG G  +   AL  AG     V +++
Sbjct: 11  WLEIDLDTIRSNFAALRSMAGPGIKIMPAVKANAYGHGIVESCRALEQAGADYLGVGNID 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E + LR    Q  I +  G    +   +    +LIP I SV      S        HP  
Sbjct: 71  EAILLRENGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAIS--RLSKAEHPVF 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLERFR 183
           L ++TG  RLG++ +E  DF   +      ++  I SH+A AD  D        Q  RF 
Sbjct: 129 LGIETGRGRLGVNAEEFPDFVRQTAALPGIKIEGIYSHMAAADWPDKPHEYADWQYRRFL 188

Query: 184 TLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM---QTV 235
                 K +        LA++ G +  PN       PG +++G +    +         +
Sbjct: 189 DGTRVLKELGLSVPFMQLANTPGSIAYPNLRLSGICPGRAVWGYSPLEKRDGHPALSFPM 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
              ++R+++++  + G+        +L     I V A G +DG     +           
Sbjct: 249 KAWKSRLLMVKDVIGGKFGPGYQAVRLDVPKHIGVMAGGISDGISPNFAN---------- 298

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            GG   ++G  VP+   I ++ T+ D+TD      GD + +FG     +I ++++  A G
Sbjct: 299 -GGSVLLRGKRVPVASSICLEHTILDLTDCPEAAEGDEVVLFGKQGDAEITMEELRAAFG 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
               +    I    ++ Y
Sbjct: 358 RDLMEFWTGITPHVSRIY 375


>gi|226356276|ref|YP_002786016.1| alanine racemase [Deinococcus deserti VCD115]
 gi|259710064|sp|C1CVP5|ALR_DEIDV RecName: Full=Alanine racemase
 gi|226318266|gb|ACO46262.1| putative Alanine racemase [Deinococcus deserti VCD115]
          Length = 355

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 106/372 (28%), Positives = 163/372 (43%), Gaps = 27/372 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAP-ALYNAGVQD 59
           M S  +    I   AL +N   ++A +G  R    VK NAYG G E IA  A  +  V  
Sbjct: 4   MQSRAY--ALISEAALHHNLSGLSARAG-TRLLLPVKANAYGHGLELIARQAAAHPDVWG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
             V +  E   + L      + +L    P +   + D  +   +SS+ +           
Sbjct: 61  LAVATPREAQAVALLNLGRPVVLLTPPTPDEVVPLADLGVRLPVSSLEEAEAL------P 114

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           V     L+VDTG NRLG    EA+        + +       +H A  D+        QL
Sbjct: 115 VHARAHLKVDTGMNRLGARPDEAIRIGQRLAERGVL--EGAYTHFATTDEEDLSFAHEQL 172

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTD-KINKSHPMQTVVT 237
            RFR++I+    + A  A+  GIL   +     L+RPG++ YG     + +  P+  V+T
Sbjct: 173 RRFRSVIAALPPVLAHCANGGGILSLGHLGDMGLSRPGLASYGFAPAHLQRVVPLTPVMT 232

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A +  + KA AGE VSYGG  +  RD+ +A    GYADGYP               L 
Sbjct: 233 LRATVTQVHKAFAGESVSYGGLWQAPRDTTLATIGFGYADGYPRNA-----------TLR 281

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYD 356
               ++G   P++G+I MD  M D+T    +  GD ++ +G  D+ + +VA    T  Y+
Sbjct: 282 AHVLVRGERRPVVGRICMDQCMVDVTGL-EVRAGDQVECWGSGDLTVSEVAGWGDTIEYE 340

Query: 357 LLVRIGTRYAKF 368
           +L  +G R  + 
Sbjct: 341 VLTGLGERVERV 352


>gi|212704878|ref|ZP_03313006.1| hypothetical protein DESPIG_02945 [Desulfovibrio piger ATCC 29098]
 gi|212671720|gb|EEB32203.1| hypothetical protein DESPIG_02945 [Desulfovibrio piger ATCC 29098]
          Length = 352

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 99/357 (27%), Positives = 155/357 (43%), Gaps = 30/357 (8%)

Query: 31  RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
           R   V+K +AYG G  ++A AL  AG + F V +V EG+ LR       I  L G    +
Sbjct: 6   RLMPVIKSDAYGHGMTEVAHALDAAGARHFAVGTVAEGICLRQDGLAQTILPLLGCQNDE 65

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA-LQVDTGFNRLGLSLQEALDFTHNS 149
           +    +   +  + +  +    +  +S         +++DTG +RLG S ++        
Sbjct: 66  DWQQANACGLTPLITGFEALEKAAALSSPADPWGVAIKLDTGMSRLGFSAEDIPALLERL 125

Query: 150 FNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLI----SHYKGIEASLASSSGILL 204
                 + SL +SH  CAD P        QLE+F  +     + Y  ++ SLA+S+G + 
Sbjct: 126 RACPGLKPSLAVSHFPCADMPEQEAFTRRQLEKFTAMTDSLRAAYPSLKRSLANSAGTMG 185

Query: 205 GPNYHFQLTRPGISLYGGTDK-----INKSHPMQTVVTAEARIILIRKALAGELVSYGGQ 259
            P   F+L RPG SLYGG          +   ++ V+   A ++ +R    GE +SYG  
Sbjct: 186 WPESRFELCRPGFSLYGGNPFRGTAWEGRGAGLEPVMEVSAPLLQVRHLKPGEGISYGQT 245

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
               R+  +AV   GYA GYP   SG                + G   P +G+I M M M
Sbjct: 246 FIAPREMSVAVVGAGYATGYPRGASGRI-----------HVLVNGRRAPQVGRICMGMFM 294

Query: 320 FDITDSLSIEVGDYIQIFG-------PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            D+T       GD   + G         + +D++A A G  +Y+LL  +G    + Y
Sbjct: 295 IDVTGLP-AHAGDLAWLLGGPAAPGETPVSIDELAEACGGFSYELLCLLGQGSPRVY 350


>gi|311107365|ref|YP_003980218.1| alanine racemase [Achromobacter xylosoxidans A8]
 gi|310762054|gb|ADP17503.1| alanine racemase [Achromobacter xylosoxidans A8]
          Length = 375

 Score =  232 bits (591), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 85/384 (22%), Positives = 147/384 (38%), Gaps = 38/384 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   + ++AL +N  ++                   AV+K NAYG G E+        
Sbjct: 3   RPISATVSVSALAHNLAAVRRHLDQTAEAASGLPPSIWAVIKANAYGHGIEQAVAGFSK- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
             Q   +  ++E V+ R       I +L G     +  + D   +       +       
Sbjct: 62  -AQGLAMLDLDEAVRCREAGWGGPILLLEGFFEPSDLDLVDRYHLSTTVHNREQLDMLAR 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSS 172
                     L++++G NRLG S                + +      ++H ACAD P  
Sbjct: 121 ARFSRRVDIMLKLNSGMNRLGFSPAAYAAAHERAMLLQQQGVLGSVGKMTHFACADGPQG 180

Query: 173 HVNSVQLERFRTLISHYKGIEASLASSSGILLG------PNYHFQLTRPGISLYGGTDKI 226
              + QL  F ++     G   S+ +S+  L                RPGI LYG +   
Sbjct: 181 --VNEQLALFNSVTHKMPGA-ISVCNSAATLRFAEIAVASETQAHWVRPGICLYGASPFA 237

Query: 227 NK---SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +    S  ++  ++  + II ++   AG+ V YG   +  R   I + A GYADGYP   
Sbjct: 238 DAEASSFGLKPAMSLRSEIIAVQDLKAGDSVGYGAIFRADRSMRIGIVACGYADGYPRHA 297

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IK 342
                        G    + G    ++G+++MDM + D+    +  VG  + ++G +   
Sbjct: 298 -----------TTGTPVVVAGIRTQLVGRVSMDMLIVDLGPVPAAGVGSPVSLWGEEGPS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VA A+GT  Y+LL  +  R  
Sbjct: 347 VDEVAQAAGTIGYELLCALAPRVP 370


>gi|110680421|ref|YP_683428.1| alanine racemase [Roseobacter denitrificans OCh 114]
 gi|123361723|sp|Q163V1|ALR_ROSDO RecName: Full=Alanine racemase
 gi|109456537|gb|ABG32742.1| alanine racemase [Roseobacter denitrificans OCh 114]
          Length = 344

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 134/363 (36%), Positives = 187/363 (51%), Gaps = 26/363 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL+AL  NW S+NALS +  TAAVVK NAYGLG    A AL  AG + FFV   EEG
Sbjct: 6   LTIDLSALAANWRSLNALS-DVETAAVVKANAYGLGVGTAASALAEAGARHFFVAVAEEG 64

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           V LR       +I V  G   G   +I D  L P+I+S+ Q+    + +     H + +Q
Sbjct: 65  VALRQALGAGPQISVFSGHMAGDTALIRDAGLTPMINSIDQM---IRHVEALPEHDFGIQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+   E       +  +     SL++SHLACAD+PS  +N  QL+ F  +  
Sbjct: 122 LDTGMNRLGMEDGEWRAVREVATQR---PPSLVMSHLACADEPSHQMNRQQLDCFVEMTQ 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
                  SLA++ GIL+GP+YHF LTRPGI LYGG   ++       VV  +  +I +R 
Sbjct: 179 DITA-PRSLAATGGILMGPDYHFDLTRPGIGLYGGLPFVDA----LPVVQLDVPVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V Y      T  + IA  + GYADG    +      H+               +
Sbjct: 234 VHPGETVGYANTWTATAPARIATISAGYADGLIRAMGAKARLHAGDTA-----------L 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+++MD+   D+T   S    D +Q+ G    +D VA  + T  Y++L  +G RY +
Sbjct: 283 PVVGRVSMDLIGVDVTALGSDP--DSLQLIGRHQSVDTVAGFADTIGYEILTSLGDRYKR 340

Query: 368 FYT 370
            YT
Sbjct: 341 VYT 343


>gi|15806106|ref|NP_294810.1| alanine racemase [Deinococcus radiodurans R1]
 gi|6458816|gb|AAF10657.1|AE001958_11 alanine racemase [Deinococcus radiodurans R1]
          Length = 367

 Score =  232 bits (591), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 25/364 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
             I   AL +N  ++   SG  R    VK +AYG G E +         V    V + +E
Sbjct: 23  AHISAAALDHNLSALAQRSG-TRLLLPVKADAYGHGMELVGRLAAAHPDVWGLAVATPQE 81

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
              L        + +L    P +   + D  +   +S++ ++                L+
Sbjct: 82  AETLARLDLGKPLLLLTPPAPEELGALADLGVRLPVSTLAEVEALPAHAQA------HLK 135

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG NRLG    +A          + GQL  + +H A AD+P       QL RFR+++ 
Sbjct: 136 VDTGMNRLGARPADA--VAVGRALAERGQLEGVYTHFATADEPDLSFALTQLVRFRSVLD 193

Query: 188 HYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKSHPM-QTVVTAEARIILI 245
               + A  A+  G+L         L RPG++ YG   +  +     + V+T  AR+  +
Sbjct: 194 ALPPVLAHCANGGGVLSFGRIEGMSLARPGLAAYGYVPEHLRHVCALRPVMTVRARVNQL 253

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
             A  GE VSYG   +  R++ +AV  +GYADGYP   +G  +             I G 
Sbjct: 254 HTAYPGETVSYGALWRAERETGVAVVGMGYADGYPRNATGRAA-----------VLIGGE 302

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYDLLVRIGTR 364
             P+LG+I MD  M D+T    + VGD+ +++G  D+ + DVA    T  Y++L  +G+R
Sbjct: 303 RRPVLGRICMDQMMVDVTGL-DVGVGDWAELWGEGDLSVTDVARWGDTIEYEVLTGLGSR 361

Query: 365 YAKF 368
             + 
Sbjct: 362 VERR 365


>gi|318042533|ref|ZP_07974489.1| alanine racemase [Synechococcus sp. CB0101]
          Length = 396

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 168/383 (43%), Gaps = 28/383 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           H  +   +++   A++ N  S+   L+   +  AVVK + YG G   +A A    G   F
Sbjct: 17  HPRQRAWVEVCEAAVQANARSLRRSLAPGCQLMAVVKADGYGHGAVPVARAAAAGGASTF 76

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQL-TFYSKLMSC 118
            V +++EGV+LR    +  + VL     P + +      L+P +S + +     +     
Sbjct: 77  GVATLQEGVELRQAGLRQPVLVLGNLTQPEELRACLHWQLMPTLSGMREALLCQNLAAGS 136

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVN 175
           G      L++DTG  RLG   QE           +  QL+ + SHLA AD P      + 
Sbjct: 137 GRPMAVQLKLDTGMARLGAPWQEGRRIAEAISALEAVQLAGLYSHLADADAPGTVLDPLT 196

Query: 176 SVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINK 228
             Q ERF  +++  +          LA+S+G L     H+ + R G++LYG      +  
Sbjct: 197 RQQQERFEQVLTGVQEAGLACGSRHLANSAGTLRTAQLHYDMVRVGLALYGQRPAVHLGG 256

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           S  +Q  +   AR+ LIR+  AG  VSYG +    R S +AV +IGYADG P  LS    
Sbjct: 257 SLALQPAMQVRARVSLIREVPAGTGVSYGHRFTTQRPSRLAVVSIGYADGVPRLLSNRL- 315

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                     +    G  +P +G ITMD  + D T++  +E G  + + G D    I   
Sbjct: 316 ----------QVLHHGRRIPQVGAITMDQLVLDATEAPELEQGSVVTLLGSDGGERIDPL 365

Query: 345 DVALASGTTNYDLLVRIGTRYAK 367
             +   GT  +++L     R  +
Sbjct: 366 AWSDPCGTIPWEILCGFKHRLPR 388


>gi|237740856|ref|ZP_04571337.1| alanine racemase [Fusobacterium sp. 4_1_13]
 gi|229431153|gb|EEO41365.1| alanine racemase [Fusobacterium sp. 4_1_13]
          Length = 356

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 34/375 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L   GV+ F V ++
Sbjct: 2   RTWIEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSIEIAKILKEVGVKFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L+   ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQ---LQFLVDKNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVNEAEKVIEFCKNNNL-NLVGIFSHLSDSDGNTVETKNFTLEQIEKF 177

Query: 183 RTLISH-YKGIEASLASSSGIL--LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +++     +E    S+S  +     +    L R GI +Y  T    K+  ++ + T +
Sbjct: 178 KKIVNSLNLNLEYIHISNSAGITNFHNDILGNLVRLGIGMYSFTGN-KKTSYLKNIFTIK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R++ I+K      VSYG    L  DS  AV  IGYADG    LS            GG 
Sbjct: 237 SRVLFIKKVNKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGGY 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN--- 354
             I  +   I+G I MDMTM  I   +   I++G+ + +   DI LD++           
Sbjct: 286 VLINNHRCEIIGNICMDMTMIRIPKEIENSIKIGNEVTVINADI-LDNLN-----IPELC 339

Query: 355 -YDLLVRIGTRYAKF 368
            ++ +  IG R  + 
Sbjct: 340 VWEFMTGIGKRVKRI 354


>gi|315655821|ref|ZP_07908719.1| D-alanine racemase [Mobiluncus curtisii ATCC 51333]
 gi|315489885|gb|EFU79512.1| D-alanine racemase [Mobiluncus curtisii ATCC 51333]
          Length = 442

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 99/440 (22%), Positives = 171/440 (38%), Gaps = 84/440 (19%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           S   +R  ++L+A + N   M   + +++  A+VK NAYG G E++A A   AG +   V
Sbjct: 7   SQWPVRAVVNLSAYQENLAQMRRFAPHSQQMAIVKANAYGHGIERMALAALGAGTEWLGV 66

Query: 63  TSVEEGVKLRLYTPQ----------------------------------ARIFVLYGIHP 88
               E  +LR Y  +                                   RI        
Sbjct: 67  AKASEAFRLRKYLDKHGVPRDHLVDTPTSAMMRSRLYQTAAMGLPSATRPRILTWLYAPH 126

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTH 147
                +  + +   +S++ QL   S+   + G      L+VDTG  R G + ++      
Sbjct: 127 TDLLPVVKSEIDISVSTLDQLDQVSRACDAAGKRARLHLKVDTGLCRAGATDEDFPVLCK 186

Query: 148 NSFNKK---LGQLSLIISHLACADDPSSH---VNSVQLERFR--TLISHYKGIEASLAS- 198
            +  ++   L ++S + SHLA AD+ ++        QL+ F     ++   G+   L   
Sbjct: 187 LARARERAGLVEVSAVWSHLARADEDTAAAEAFTKSQLKAFDEAWEVAQEAGLRPQLRHI 246

Query: 199 --SSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGE 252
             ++GI+  P  H+ L R GIS YG +            ++ V+  E  ++ +++   G 
Sbjct: 247 AATAGIIWYPESHYDLVRVGISGYGLSPNPEIASSWQLGVRPVLRLETNVVQVKRVEKGA 306

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            VSYGG+        + +  +GYADG                   G+ +IKG   PI+G+
Sbjct: 307 AVSYGGEWVAPGPRWLVLLPVGYADGLHRLAKNR-----------GETWIKGRRAPIVGR 355

Query: 313 ITMDMTMFDITDSLS---------IEVGDYIQIFGPD--------------IKLDDVALA 349
           I MD  + D+  ++          +E G+   IFG                   DD A  
Sbjct: 356 IPMDQIVVDLGPAVDDTGTSVPCPVEPGELAIIFGDPKDCLLGGIPGAPALPTADDWAEW 415

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T NY+++  I     + Y
Sbjct: 416 TDTINYEVITSISPNVPRVY 435


>gi|332094464|gb|EGI99513.1| alanine racemase [Shigella boydii 3594-74]
          Length = 324

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 92/337 (27%), Positives = 145/337 (43%), Gaps = 22/337 (6%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGV-QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKI 93
           +VK NAYG G E+I  AL   G    F + ++EE + LR    +  I +L G    Q+  
Sbjct: 1   MVKANAYGHGIERIWSAL---GATDGFALLNLEEAITLRERGWKGPILMLEGFFHAQDLE 57

Query: 94  IFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK 153
           I+D + +             +           L+V++G NRLG      L          
Sbjct: 58  IYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVNSGMNRLGFQPDRVLTVWQQLRAMA 117

Query: 154 LGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLT 213
                 ++SH A A+ P    +++         +       SL++S+  L  P  HF   
Sbjct: 118 NVGEMTLMSHFAEAEHPDGISSAMARI---EQAAEGLECRRSLSNSAATLWHPEAHFDWV 174

Query: 214 RPGISLYGGTDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
           RPGI LYG +         +  ++ V+T  + II ++   AGE V YGG+     +  I 
Sbjct: 175 RPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIGVQTLKAGERVGYGGRYTARDEQRIG 234

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE 329
           + A GYADGYP                G    + G     +G ++MDM   D+T      
Sbjct: 235 IVAAGYADGYPRHA-----------PTGTPVLVDGVRTMTVGTVSMDMLAVDLTPCPQAG 283

Query: 330 VGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           +G  ++++G +IK+DDVA A+GT  Y+L+  +  R  
Sbjct: 284 IGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVP 320


>gi|330817458|ref|YP_004361163.1| Alanine racemase [Burkholderia gladioli BSR3]
 gi|327369851|gb|AEA61207.1| Alanine racemase [Burkholderia gladioli BSR3]
          Length = 356

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 86/347 (24%), Positives = 141/347 (40%), Gaps = 20/347 (5%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
              +  ++  AVVK NAYG G  +  P L +     F +  +EE VKLR       I +L
Sbjct: 22  RRFAPRSKVWAVVKANAYGHGLARAFPGLRS--TDGFGLLDLEEAVKLRELGWAGPILLL 79

Query: 84  YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEAL 143
            G     +  + D   +             +           L++++G NRLG +  +  
Sbjct: 80  EGFFRSTDVDVIDRYSLTTTVHNDDQLRMLETARLSKPINIQLKMNSGMNRLGYAPDKYR 139

Query: 144 DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGIL 203
                +          +++H A AD       + Q+  F        G   SLA+S+ ++
Sbjct: 140 AAWERARTCPGIGQITLMTHFADADGERG--VADQMAAFERGAEGIAGAR-SLANSAAVM 196

Query: 204 LGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEARIILIRKALAGELVSYGGQ 259
             P+ H    RPGI LYG +     +      +Q  +T  + +I ++    G+ V YGG 
Sbjct: 197 WHPDTHGDWVRPGILLYGASPSGRAADIAGAGLQAAMTLGSELIAVQNIAKGQAVGYGGA 256

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
                   I V A GYADGYP                G    + G    I+G+++MDM  
Sbjct: 257 FVAPAQMRIGVVACGYADGYPRIA-----------PEGTPIVVDGVRTRIVGRVSMDMIT 305

Query: 320 FDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            D+T      +G  ++++G  + +DDVA +  T  Y+L+  I +R  
Sbjct: 306 VDLTPVPGAGIGARVELWGQALPIDDVAASCSTVGYELMCAIASRVP 352


>gi|330719007|ref|ZP_08313607.1| alanine racemase [Leuconostoc fallax KCTC 3537]
          Length = 370

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 151/375 (40%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R++I  +A+++N   +   +G  +    VK N YGLG   ++ A    G     V  
Sbjct: 7   RPTRIEISKSAIQHNIEVVKQTAGATKLFLAVKSNGYGLGLVPVSQAAVAGGAYGLAVAL 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L      Q +++   N+I  + S+  L   ++ +S       
Sbjct: 67  MDEALALRDARITAPIIILGISPAEQAELMAVQNIITTVVSLDWLKSAAQNLSGEQRLAV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERF 182
           ++ VDTG  R+G   ++AL  T +   +   +       +H + +D         QLER+
Sbjct: 127 SIGVDTGMGRIGFRDRDALAETIDYLQQHQDKFEYTGLFTHFSESDSSEVAYFHKQLERW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVT 237
             L       +      S + +         + R G  +YG      ++N    +Q V+T
Sbjct: 187 HALTDGLPAPKFYHVANSGAAMYHADEVPHDVVRVGTVVYGMEPSRGELNDGKDLQPVMT 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I  +++  AGE +SY  +   T D  I    IGY DG+   + G +          
Sbjct: 247 LRSEINFMKQLPAGEGISYSHKYTTTDDEWIGTVPIGYGDGWLRKMMGFN---------- 296

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G  VPI+G++ MD  M  +     +  G  +   G D      L+DVA  +   
Sbjct: 297 --VIVDGQYVPIVGQVAMDQLMIRLPREYPL--GTTVTFIGRDGALENTLEDVATHADLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            ++++     R  + 
Sbjct: 353 PWEIVTGFQERLHRI 367


>gi|169835830|ref|ZP_02869018.1| hypothetical protein cdivTM_01741 [candidate division TM7
           single-cell isolate TM7a]
          Length = 342

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 21/350 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +I++  L +N   +  +    +  AV+K +AYG G  KI  AL   G+++F V + +E
Sbjct: 4   WAEININNLYSNIDEIEKIVPKEKIIAVIKADAYGHGMLKICDALIKKGIKNFAVATSDE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYAL 126
            +K++       + +L  +      +I D  +  +++   ++ F  K     G +    +
Sbjct: 64  ALKIKELHNDIMVLILGPVENEYMDLIADKKIYFMVTDFEEIEFLEKTGKENGKTVDVFI 123

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++DTG  R+G    E         N K      I SH + +D  +     +Q  +F+ + 
Sbjct: 124 KIDTGMGRVGFQESEVEQLNKILKNVKHINPIGIFSHFSSSDS-NKEYTKLQERKFKAMC 182

Query: 187 SHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLY-GGTDKINKSHPMQTVVTAEA 240
                         L +S G L          R GI +Y G TDK    +  + V++  A
Sbjct: 183 EKISSGIPSIRYRHLHNSFGTLKFQESVQDFVRAGIIIYGGVTDKETAPYKFKPVMSLFA 242

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I  I+       +SYG           A  +IGYADG    LS             G  
Sbjct: 243 KISYIKTLKEDSFISYGNTYLGKAGETYATVSIGYADGVRRDLSN-----------KGYV 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDS--LSIEVGDYIQIFGPDIKLDDVAL 348
           F KG+   I G++ MD  M  + D      + GD ++ FG +I + +VA 
Sbjct: 292 FYKGHKCKIAGRVCMDQLMILLPDELKDEAKKGDVVEFFGENISVVEVAE 341


>gi|20137249|sp|Q9RVE3|ALR_DEIRA RecName: Full=Alanine racemase
          Length = 351

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 25/364 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
             I   AL +N  ++   SG  R    VK +AYG G E +         V    V + +E
Sbjct: 7   AHISAAALDHNLSALAQRSG-TRLLLPVKADAYGHGMELVGRLAAAHPDVWGLAVATPQE 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
              L        + +L    P +   + D  +   +S++ ++                L+
Sbjct: 66  AETLARLDLGKPLLLLTPPAPEELGALADLGVRLPVSTLAEVEALPAHAQA------HLK 119

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG NRLG    +A          + GQL  + +H A AD+P       QL RFR+++ 
Sbjct: 120 VDTGMNRLGARPADA--VAVGRALAERGQLEGVYTHFATADEPDLSFALTQLVRFRSVLD 177

Query: 188 HYKGIEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKSHPM-QTVVTAEARIILI 245
               + A  A+  G+L         L RPG++ YG   +  +     + V+T  AR+  +
Sbjct: 178 ALPPVLAHCANGGGVLSFGRIEGMSLARPGLAAYGYVPEHLRHVCALRPVMTVRARVNQL 237

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
             A  GE VSYG   +  R++ +AV  +GYADGYP   +G  +             I G 
Sbjct: 238 HTAYPGETVSYGALWRAERETGVAVVGMGYADGYPRNATGRAA-----------VLIGGE 286

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTNYDLLVRIGTR 364
             P+LG+I MD  M D+T    + VGD+ +++G  D+ + DVA    T  Y++L  +G+R
Sbjct: 287 RRPVLGRICMDQMMVDVTGL-DVGVGDWAELWGEGDLSVTDVARWGDTIEYEVLTGLGSR 345

Query: 365 YAKF 368
             + 
Sbjct: 346 VERR 349


>gi|251771481|gb|EES52058.1| alanine racemase [Leptospirillum ferrodiazotrophum]
          Length = 403

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 106/387 (27%), Positives = 162/387 (41%), Gaps = 38/387 (9%)

Query: 8   RLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           R+ +DL  L+ N    + +L        V+K NAYG G   ++  + + G+    V   +
Sbjct: 18  RVTVDLGGLRENVRAVLRSLPKGTGLLPVIKSNAYGHGIIPVSQLMTDEGIPRVAVMGAD 77

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EG  LR      +I +L G  P + ++  +  L P+I  + Q+    +      S    L
Sbjct: 78  EGCLLRKSGFSGKIILLGGFAPDEIQLCQNLRLTPIIHHMDQVRALERFSPEAPSLDVHL 137

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           ++D+G  RLG    E              ++  +++H    +D      S+  E FR  I
Sbjct: 138 KIDSGMGRLGFLPSEFPLVLDRLQRMPSVKIEGLMTHFPVPEDRED--TSICREIFRQSI 195

Query: 187 SHYKGIEA------SLASSSGILLGPNYHFQ------------LTRPGISLYGGTD-KIN 227
               G  A         +SSG +L                     RPGI LYG      N
Sbjct: 196 VTMIGHPALSALSVVHMASSGAILSGEVMLDLPTPPSGRRISFWARPGILLYGHFPGAHN 255

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            S P++ V   EAR++ IR    G  VSYG   ++ RDS + V  +GYADG P  LSG  
Sbjct: 256 PSFPVRPVFGLEARVLAIRTLPRGSSVSYGRTVRVDRDSRVGVLGMGYADGLPRLLSG-- 313

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY-IQIFGPD----IK 342
                     G   +  +  P LG+I MDM + D+TD  + E     I +  PD    + 
Sbjct: 314 ---------KGWAVVGNHRAPFLGRICMDMVVVDLTDIPADETHSEWITLIDPDNTLSMS 364

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
           +D +AL   T  Y++L  +G R  + Y
Sbjct: 365 VDQLALEGNTIPYEILCLLGHRSERRY 391


>gi|328954808|ref|YP_004372141.1| alanine racemase [Coriobacterium glomerans PW2]
 gi|328455132|gb|AEB06326.1| alanine racemase [Coriobacterium glomerans PW2]
          Length = 383

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 98/384 (25%), Positives = 155/384 (40%), Gaps = 30/384 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +  ++ID  A+  N  +    L    R   V+K +AYG G  + +  + +AG   F V 
Sbjct: 10  RWAWVEIDRGAMLRNTRAFKKMLKPRQRLCCVLKADAYGHGAVESSKIMRSAGADMFAVA 69

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSH 122
           +V EG++LR     A + VL          + + +L+P +  S   L F    +      
Sbjct: 70  TVAEGIELRRGGCSAPVLVLGEPPCDAIPELLENDLMPAVYTSEFALAFGECAVQVDKVG 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            Y L ++TG NR+G+   + + F       +  Q   + +H A ADDP      +Q  RF
Sbjct: 130 KYHLAIETGMNRIGVHYTKVVSFRRGIEFHRGIQCDGVFTHFATADDPCGWDYKLQCTRF 189

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
              +   +            ++   +L P  H  + R GI LYG        +   +  V
Sbjct: 190 DEAVQAMRDAGFECGIVHCDNTPASILDPESHHDMIRVGIGLYGLQPADATRERIRLDPV 249

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           ++  AR++ +     GE V YG   ++ R +  I    IGYADG   TLS          
Sbjct: 250 MSVRARVMRVAYPSMGEGVGYGFTYRVPRATVQICTLPIGYADGLARTLSNRMD------ 303

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDI-----TDSLSIEVGDYIQIFGPD----IKLDD 345
                   +G  +  +G I MD TM  I           E GD + I G D    + +D+
Sbjct: 304 -----VLYRGGRIRQVGNICMDQTMVAIQQTPAEPIPEAEYGDLMTIVGRDGDAEVSMDE 358

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
           +A    T NY++    G R  K Y
Sbjct: 359 MARLRNTINYEVACDFGMRLEKIY 382


>gi|262066089|ref|ZP_06025701.1| alanine racemase [Fusobacterium periodonticum ATCC 33693]
 gi|291380184|gb|EFE87702.1| alanine racemase [Fusobacterium periodonticum ATCC 33693]
          Length = 354

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 91/372 (24%), Positives = 154/372 (41%), Gaps = 30/372 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  L+ +     VVK NAYGLG  +IA  L   GV  F + ++
Sbjct: 2   RTWVEIDKENLKYNILKLKELANDREVLGVVKANAYGLGSVEIAKILQEVGVNFFGLANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE V+L+    +A   +L      +     +     + +++  +     L+   ++    
Sbjct: 62  EEAVELQEAGIKANFLILGASFEDEL---IEATKRGIHTAISSMQQLKFLVRNNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA +  +      L  L  I +HL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAEEVINFCKTNNL-NLVGIFTHLSDSDGNTIDTKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + ++         +++S+GI    +                    K+  ++ V T ++++
Sbjct: 178 KNIVKDLDLKYIHISNSAGITNFHDDILGNLVRAGIAMYSFTGNKKTSCLKNVFTIKSKV 237

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +K      VSYG    L  DS  AV  IGYADG    L             GG   I
Sbjct: 238 LFTKKVGKDSFVSYGRHYTLPADSTYAVIPIGYADGLKKYL-----------TKGGYVLI 286

Query: 303 KGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----YD 356
             Y   I+G I MDMTM  I   L   I++ D + +   DI +D++            ++
Sbjct: 287 NNYRCEIIGNICMDMTMVRIPKELEKTIKISDEVTVINADI-IDNLN-----IPELCVWE 340

Query: 357 LLVRIGTRYAKF 368
            +  IG R  + 
Sbjct: 341 FMTGIGRRVKRI 352


>gi|257069444|ref|YP_003155699.1| alanine racemase [Brachybacterium faecium DSM 4810]
 gi|256560262|gb|ACU86109.1| alanine racemase [Brachybacterium faecium DSM 4810]
          Length = 390

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 89/376 (23%), Positives = 140/376 (37%), Gaps = 27/376 (7%)

Query: 11  IDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           ID +A+  N  +M  L        AVVK + YG G    A A    G     V      +
Sbjct: 19  IDPSAITENTRAMGTLLEEQTALMAVVKADGYGHGMLTAARAAIEGGATWLGVAHPASAL 78

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY----SKLMSCGVSHPYA 125
            L      A+I            ++ +     V  SV                       
Sbjct: 79  ALARADLDAQILTWLFEPHTARIVLPEVLASGVDVSVGSPEMLALVSEAARQADRRARVH 138

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L++DTG  R G+   +  +           Q +   +HL  ADDPS      Q+E F + 
Sbjct: 139 LKIDTGMGRNGVLPWQIREMGATLREDDFLQATGAWTHLTSADDPSDPATDQQVELFDSA 198

Query: 186 ISHYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            + +           +A+S+  L  P+ H  L RPGI+LYG    +    P++  +T  +
Sbjct: 199 CAAFADEVGPIPLQHIANSAATLTRPDLHRDLVRPGIALYG-YPPVPTDVPLRPAMTLTS 257

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI L+++   G  + YG  +  TR + + +  IGYADG     S        +       
Sbjct: 258 RIALVKEVPEGHSIGYGRMRTTTRPTRLGLVPIGYADGLHRAGSDRCDVLVRTAS----- 312

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI---------KLDDVALASG 351
                  P +G+I+MD  + D+        GD + +FG              DD A A+G
Sbjct: 313 --GDRRAPQVGRISMDQIVIDLGADSEARPGDEVFLFGDAGGDPGGPSASTADDWAAAAG 370

Query: 352 TTNYDLLVRIGTRYAK 367
           T  Y++L  +  R  +
Sbjct: 371 TIPYEVLTSVSGRVTR 386


>gi|237739916|ref|ZP_04570397.1| alanine racemase [Fusobacterium sp. 2_1_31]
 gi|229423524|gb|EEO38571.1| alanine racemase [Fusobacterium sp. 2_1_31]
          Length = 354

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 96/372 (25%), Positives = 154/372 (41%), Gaps = 30/372 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  L+ N     VVK NAYGLG  +IA  L   GV  F + ++
Sbjct: 2   RTWVEIDKENLKYNILKLKELADNREVLGVVKANAYGLGSVEIAKILQEVGVNFFGLANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    +A   +L      +        +   ISS+ QL F    +   ++    
Sbjct: 62  EEAIELQDAGIKANFLILGASFEDELVEATKRGIHTAISSIQQLRFL---VENNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA +  +      L  L  I +HL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAEEVINFCKTNNL-NLVGIFTHLSDSDGNTIDTKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + ++         +++S+GI                         K+  ++ V T ++++
Sbjct: 178 KNIVKGLDLKYIHISNSAGITNFHENILGNLVRAGIAMYSFTGNKKTPCLKNVFTIKSKV 237

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +K      VSYG    L  DS  AV  IGYADG    L             GG   I
Sbjct: 238 LFTKKVNKDSFVSYGRHYTLPADSTYAVIPIGYADGLKKYL-----------TKGGYVLI 286

Query: 303 KGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----YD 356
             Y   I+G I MDMTM  I   L   I++ D + +   DI +D++            ++
Sbjct: 287 NNYRCEIIGNICMDMTMVRIPKELEKTIKISDEVTVINADI-IDNLN-----IPELCVWE 340

Query: 357 LLVRIGTRYAKF 368
            +  IG R  + 
Sbjct: 341 FMTGIGRRVKRI 352


>gi|226365649|ref|YP_002783432.1| alanine racemase [Rhodococcus opacus B4]
 gi|226244139|dbj|BAH54487.1| alanine racemase [Rhodococcus opacus B4]
          Length = 400

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 155/374 (41%), Gaps = 26/374 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N   +   +  A   AVVK + Y  G   +A A   AG  +  VT+V E + 
Sbjct: 32  VDLDAIAHNVRILRDSARGAAMMAVVKADGYNHGAVAVARAALAAGASELGVTTVSEALT 91

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPYALQVD 129
           LR     A +                 ++   +SS        +     G      ++VD
Sbjct: 92  LRRAGIDAPVLAWLHTVDADFAPAIAADVELGVSSPRHLAAVVAAARRVGTPAIVTMKVD 151

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRTLI 186
           TG NR G++  E      +    +         I SHLA AD+P       Q +R    I
Sbjct: 152 TGLNRNGVAPDELAQVLVDLARAQAEGSVRLRGIFSHLAHADEPHHAWIDSQRDRLVDAI 211

Query: 187 SHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTAEA 240
           +  K          L++S+  L  P+  F + RPGI++YG +         ++  +T  +
Sbjct: 212 ADAKRHGLVPEVVHLSNSAATLTRPDLRFDMVRPGIAIYGLSPVPELGQFGLRPAMTLRS 271

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+ L++K  AGE VSYG Q    RD+ +A+  +GYADG P +LSG             + 
Sbjct: 272 RVALVKKVAAGEGVSYGHQWVAPRDTTVALLPLGYADGLPRSLSGRF-----------EV 320

Query: 301 FIKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGP----DIKLDDVALASGTTNY 355
            +     P +G++ MD  + D+  D   +  GD    FG     +    + A    T +Y
Sbjct: 321 QLGAERRPGIGRVCMDQVVVDLGPDGGGVREGDTAVFFGNGDLGEPIAQEWADKLDTIHY 380

Query: 356 DLLVRIGTRYAKFY 369
           +++  +  R  + Y
Sbjct: 381 EVVTGVRGRTVRTY 394


>gi|319442957|ref|ZP_07992113.1| hypothetical protein CvarD4_14474 [Corynebacterium variabile DSM
           44702]
          Length = 362

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 95/367 (25%), Positives = 149/367 (40%), Gaps = 32/367 (8%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           M  L   A   AVVK +AY  G   +A    +AG  +  V ++ E + LR     A +  
Sbjct: 1   MAGLVAPAGVMAVVKADAYNHGMADVARTAVDAGAAELGVATLGEALALRDAGVSAPVTA 60

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLT----FYSKLMSCGVSHPYALQVDTGFNRLGLS 138
              I     +   + ++   I S+  L       +     G      L VDTG +R G+S
Sbjct: 61  WIWIVGEDLRGAAEQDITLGIPSLAHLEAAVTTAAGSAEAGRPLKVGLMVDTGLSRSGIS 120

Query: 139 LQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEA- 194
             E       +       L  ++ + SH A ADDP S    +Q +RF   I   +     
Sbjct: 121 PTEWPAALDAAEAAVDAGLIDVTGLFSHFASADDPMSPTTDLQEKRFSARIGECRARGID 180

Query: 195 ----SLASSSGILLGPNYHFQLTRPGISLYGGTDK-INKSHPMQTVVTAEARIILIRKAL 249
                +A++   L   +   ++ RPG+ +YG     I     ++  +T  A+++  R   
Sbjct: 181 APVNHIANTPAALSRVDLRHEMVRPGVGIYGVDPCAIPSGVELRPAMTLRAKVVTTRIVE 240

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
            GE VSYG       D   AV A+GYADG P  +SG                I G   P 
Sbjct: 241 KGEGVSYGHHWIAPEDHRTAVVAMGYADGLPRAMSGNFG-----------VAIDGTWYPQ 289

Query: 310 LGKITMDMTMFDITDSLS------IEVGDYIQIFGP-DIKLDDVALASGTTNYDLLVRI- 361
           +G++ MD  + D+           +  GD+  IFG     + ++A A+GT +Y++L    
Sbjct: 290 IGRVCMDQIVVDLGPVADEGPGASVRPGDWAVIFGEGGRSVREIADAAGTIDYEILTMPR 349

Query: 362 GTRYAKF 368
           G R A+ 
Sbjct: 350 GGRVARR 356


>gi|313900478|ref|ZP_07833971.1| alanine racemase [Clostridium sp. HGF2]
 gi|312954540|gb|EFR36215.1| alanine racemase [Clostridium sp. HGF2]
          Length = 416

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 96/381 (25%), Positives = 156/381 (40%), Gaps = 30/381 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +++L  LK N   + AL S + +  AV+K + YG G  +IA A+ +     F V S  E
Sbjct: 39  AEVNLQQLKENTRKVRALLSKDTKLLAVLKADGYGHGAVRIAKAIEDMS-DWFAVASFYE 97

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
             +LR       I V   +     +     N+     S       ++      +     +
Sbjct: 98  ARELRDQGITTPILVFGFLDDSNIEEAAQKNITCSALSYSYALHIAELCEQKKLRLSMHI 157

Query: 127 QVDTGFNRLGLSLQE-----ALDFTHNSFNKKLGQLSLIISHLACADD---PSSHVNSVQ 178
           ++DTGF+RLG++ +E     A       +     Q++ I +H + A           + Q
Sbjct: 158 KLDTGFHRLGIACEEERITEAYKEVRTLYELPQLQITGIYTHFSTAGSKALQDEAFLARQ 217

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG-GTDKINKSHPM 232
            + F  ++      H         +S   L  P  H  + R G+ LYG G+D   +   +
Sbjct: 218 YQLFCDMLHRLEEDHIDPGIRHCCNSKATLTNPEMHLDMVRVGLYLYGLGSDADIEYLKL 277

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + +V  +ARI  IR    GE + YG      +   IAV ++G+ADGY   L   D     
Sbjct: 278 EPIVNWKARIYAIRDVKQGEGIGYGRTFITPQPMRIAVVSLGFADGYSRCLYASDQV--- 334

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
                    + G    ILGKI MD+ M DITD   + V D I + G +    I  + +  
Sbjct: 335 ------YVLVHGKRTRILGKICMDVMMVDITDIPDVRVNDTITVLGSEGTQRISANLLGR 388

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +G T  ++   +G R  + Y
Sbjct: 389 ETGGTAVEVTCGMGKRVQRVY 409


>gi|317407371|gb|EFV87336.1| catabolic alanine racemase [Achromobacter xylosoxidans C54]
          Length = 376

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 85/384 (22%), Positives = 148/384 (38%), Gaps = 37/384 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   + ++AL +N  ++                   AV+K NAYG G E+        
Sbjct: 3   RPISATVSVSALAHNLAAVRRHLDQTAAAASGVAPSIWAVIKANAYGHGIEQAVAGFSK- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
             Q   +  ++E V+ R       I +L G     +  I D   + V     +       
Sbjct: 62  -AQGLAMLDLDEAVRCREAGWGGPILLLEGFFNPSDLDIVDRYHLSVTVHQREQLDMLAR 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSS 172
                     L++++G NRLG S          +   +   +      ++H ACAD P  
Sbjct: 121 ARLSRRVDIMLKLNSGMNRLGFSPAAYPAAHERALLLQQQGVIGSLGKMTHFACADGPQG 180

Query: 173 HVNSVQLERFRTLISHYKGIEASLASSSGILLG------PNYHFQLTRPGISLYGGTDKI 226
                QL  F ++         S+ +S+  L                RPGI LYG +   
Sbjct: 181 IT--EQLAVFNSVTHKMAAGPISVCNSAATLRFAEIAVGSEAQAHWVRPGICLYGASPFA 238

Query: 227 NKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +       ++  ++  + II +++  AG+ V YG   +  R   + + A GYADGYP   
Sbjct: 239 DAEAAAFGLKPAMSLRSEIIAVQELKAGDSVGYGALFRADRPMRVGIVACGYADGYPRHA 298

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IK 342
                        G    + G    ++G+++MDM + D+    +  VG  + ++G +   
Sbjct: 299 -----------ATGTPVVVAGIRTRLVGRVSMDMLIVDLDPIPAAGVGAPVSLWGEEGPS 347

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VALA+GT  Y+LL  +  R  
Sbjct: 348 VDEVALAAGTIGYELLCALAPRVP 371


>gi|171463622|ref|YP_001797735.1| alanine racemase [Polynucleobacter necessarius subsp. necessarius
           STIR1]
 gi|171193160|gb|ACB44121.1| alanine racemase [Polynucleobacter necessarius subsp. necessarius
           STIR1]
          Length = 381

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 91/376 (24%), Positives = 154/376 (40%), Gaps = 31/376 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV--QDFF 61
           N  +   I   A ++N + +  ++  ++  +V+K  AYG        A     +    F 
Sbjct: 20  NRPILASIHTAAFQHNLNRVREMAPESKIWSVIKARAYGH----CFDAALKGLISTDGFA 75

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-NLIPVISSVPQLTFYSKLMSCG- 119
           +  +++   LR +  + RI +L G     E    +      V+    Q+ +         
Sbjct: 76  LLDIQDAAWLREHGWKGRILLLEGFFHENELSRAEELACDLVVHCGAQVEWLESFKGKNR 135

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQ 178
                 L+++TG NRLG    +     H             ++H A AD  +       Q
Sbjct: 136 KPFNVFLKMNTGMNRLGFKPDDYRTVFHRLHAAGYHMH--HMTHFANADQVNRIPSVGSQ 193

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQT 234
            E F   I   +G   SLA+S+ IL   N      RPGI LYG +        +   +Q 
Sbjct: 194 QELFNQTIEGLEGA-TSLANSAAILWHRNALGDWVRPGIMLYGVSPTGLHADIEHSNLQV 252

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+   + II I+    G+ + YGG+ +      I + A GYADGYP              
Sbjct: 253 VMQLHSEIIDIQDLQKGDRIGYGGRYEAPEAMRIGIVACGYADGYPRHAKD--------- 303

Query: 295 FLGGKGFI----KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
             G   ++     G + P++G+++MDM   D+  + +  +G  +Q++G  + +DDVA  S
Sbjct: 304 --GTPVWVANGDHGVICPLVGRVSMDMLAIDLRHAPNASIGTTVQLWGDKVPVDDVAQMS 361

Query: 351 GTTNYDLLVRIGTRYA 366
            TT Y+LL  +  R  
Sbjct: 362 DTTGYELLCAVAPRVP 377


>gi|284992829|ref|YP_003411383.1| alanine racemase [Geodermatophilus obscurus DSM 43160]
 gi|284066074|gb|ADB77012.1| alanine racemase [Geodermatophilus obscurus DSM 43160]
          Length = 378

 Score =  229 bits (585), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 84/384 (21%), Positives = 147/384 (38%), Gaps = 28/384 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M       + +DL  +  N  ++    G     AVVK + YG G    A A    G    
Sbjct: 1   MTQRARAEVVVDLDTIAANTAALRERVGRP-LMAVVKADGYGHGLVPSARAALAGGADAL 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCG 119
            V  +EE + LR       +                 ++   +++        +   + G
Sbjct: 60  GVAVLEEALALRAAGVTVPLLSWLHTPGTDYAAALTADVEVSVNAEWALAEVVAAARATG 119

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNS 176
            +    L  DTG +R G +  +       +   +      +    SH+A AD P+     
Sbjct: 120 RTAQLHLFADTGLSREGATEADWPGLVAAAARAQDDGEVAVVGLWSHMAYADAPTHPTIG 179

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKS 229
            Q+  F   +     +   G    LA+S+  +  P+  + + RPGI++YG         +
Sbjct: 180 AQVRVFEEAVAIARAAGLTGARLHLANSAATVALPDTWYDMVRPGIAVYGLDPLGGDPAA 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
           H ++  +T  AR  L ++  AG  VSYG       ++ + +  +GYADG P         
Sbjct: 240 HGLRPAMTVRARAALTKRVPAGAGVSYGHTYFPESETTLLLVPVGYADGVPRAAGNR--- 296

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDD 345
                         G    I G++ MD  + D+ D+  +  GD + ++GP    +    D
Sbjct: 297 --------APVLAAGAHRTIAGRVCMDQFVLDVGDA-EVRAGDEVVLWGPGDRGEPTAQD 347

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
            A A  + +Y+L+ RIG R+ + Y
Sbjct: 348 WADAVDSIHYELVTRIGGRFTRRY 371


>gi|187478906|ref|YP_786930.1| alanine racemase, catabolic [Bordetella avium 197N]
 gi|123514360|sp|Q2KXU7|ALR_BORA1 RecName: Full=Alanine racemase
 gi|115423492|emb|CAJ50026.1| alanine racemase, catabolic [Bordetella avium 197N]
          Length = 374

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 92/383 (24%), Positives = 144/383 (37%), Gaps = 37/383 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   I  TAL++N   +      A            AV+K NAYG G E+   A    
Sbjct: 3   RPIFALISPTALRHNLSVVRQHLNRAAVAAGGVPPSIWAVIKANAYGHGIERALRAFSE- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
             Q   +  +EE V+ R       I +L G    Q+  + D   I       +       
Sbjct: 62  -AQGLAMLDIEEAVRCREAGWAGPILLLEGFFTPQDIDLLDRYHISTAVHCQEQLDMLAR 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSS 172
                     +++++G NRLG S Q        +       +      ++H A AD P  
Sbjct: 121 ARPSHRINAMVKLNSGMNRLGFSPQAYGAAFEAAQALMRDGVLGSVGKMTHFATADGPQG 180

Query: 173 HVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYH-----FQLTRPGISLYGGTDK-- 225
                Q E F+       G   S+ +S+  L  P            RPGI LYG +    
Sbjct: 181 P--QWQWEVFQAATQGLPG-PVSVCNSAATLRYPELAAGPGATHWVRPGICLYGASPFSD 237

Query: 226 -INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
               +  ++  +T  A II +++   G+ V YG     ++   + V + GYADGYP    
Sbjct: 238 TPAAAFGLRPAMTLRAEIIGVQQVSPGQTVGYGATFAASKAMRVGVVSCGYADGYPRHC- 296

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKL 343
                       G    + G    +LG+++MDM M D+    +  VG  + ++G     +
Sbjct: 297 ----------ATGTPVTVNGVATRLLGRVSMDMMMVDLDPVPAAGVGAPVVLWGEGGPDV 346

Query: 344 DDVALASGTTNYDLLVRIGTRYA 366
           D VA A GT  Y+LL  +  R  
Sbjct: 347 DAVAAAGGTIGYELLTALAARVP 369


>gi|315091525|gb|EFT63501.1| alanine racemase [Propionibacterium acnes HL110PA4]
          Length = 352

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 80/358 (22%), Positives = 142/358 (39%), Gaps = 24/358 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIF 81
           M   +G+ +    VK +AYG G  +++  +          V +V EG +L        I 
Sbjct: 1   MRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVATVAEGQELVEAGIPLPIL 60

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQ 140
                 P        + +   +     L   SK     GV+    + VD+G  R+GL  +
Sbjct: 61  NPPPADPWDMDAAITSGIRLTVVDFDTLEAVSKAAVRLGVTAKIHIAVDSGMGRIGLCPE 120

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERFRTLIS----HYKGIEAS 195
              + T  +   K  ++  + +HL  +D P        +++ F T +S    H       
Sbjct: 121 RLAELTAAADRAKGVEVEGVFTHLPISDVPEGAEFTRREIDTFMTAVSLVETHRGPFPLV 180

Query: 196 LASSSGILLGPNY-HFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGEL 253
             ++SG +LG +     + R GI  YG     +     +   ++  + +  ++    G+ 
Sbjct: 181 HLANSGAILGHDLGKTSMVRAGIVGYGYDPNPHADRADLHPALSWISHVTFVKTVSVGDT 240

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           + YG     +  + IA   +GYADG    LS             G   I+G + PI+G+I
Sbjct: 241 IGYGRTWTASETTKIATVPVGYADGLSRGLSN-----------KGYVLIRGSVHPIVGRI 289

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
            MD  M D+    ++ VGD + + G      +  DD+A   GT +Y++   I  R  +
Sbjct: 290 CMDQFMVDLGPDSNVTVGDEVVLIGTQGDETLTADDMAELLGTISYEITCAISKRVNR 347


>gi|33602247|ref|NP_889807.1| alanine racemase, catabolic [Bordetella bronchiseptica RB50]
 gi|33576686|emb|CAE33763.1| alanine racemase, catabolic [Bordetella bronchiseptica RB50]
          Length = 375

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 151/384 (39%), Gaps = 38/384 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   I  +AL++N  ++     +             AV+K NAYG G E+        
Sbjct: 3   RPIFASISQSALRHNLATVRRHLDDVAAKADGTPPSIWAVIKANAYGHGIEQAVAGFSA- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
             Q   +  ++E V+ R       I +L G   P   +I+   +L   + +  Q    + 
Sbjct: 62  -AQGLAMLDLQEAVRCREAGWGGPILLLEGFFQPSDLEIVDRYHLATTVHTREQFDMLAH 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPS 171
                      +++++G NRLG +          +       +      ++H ACAD P 
Sbjct: 121 -ARLSRRVDIMVKLNSGMNRLGFAPDAYGSAYARAQQLHEYGVVGGIGKMTHFACADGPQ 179

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILL-----GPNYHFQLTRPGISLYGGTDKI 226
               + Q+  F    +H  G  +   S++ +       G +      RPGI LYG +   
Sbjct: 180 G--VTQQMNVFNGATAHLAGATSVCNSAATLRYADLAVGHDGQTHWVRPGICLYGASPFA 237

Query: 227 NKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +       +   +T  + +I ++   AG  V YG   +  R   I V A GYADGYP   
Sbjct: 238 DAQAGAFGLIPAMTLRSELIAVQDIPAGAAVGYGAIFRADRPMRIGVVACGYADGYPRHA 297

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IK 342
                        G    + G    ++G+++MDM M D+    +  +G  + ++G D   
Sbjct: 298 G-----------TGTPLTVGGVRTRLVGRVSMDMLMVDLDPVPAAGIGTPVVLWGEDGPS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VA A+GT  Y+LL  +  R  
Sbjct: 347 VDEVAEAAGTIGYELLCALAPRVP 370


>gi|33592350|ref|NP_879994.1| alanine racemase, catabolic [Bordetella pertussis Tohama I]
 gi|33571995|emb|CAE41517.1| alanine racemase, catabolic [Bordetella pertussis Tohama I]
 gi|332381767|gb|AEE66614.1| alanine racemase, catabolic [Bordetella pertussis CS]
          Length = 375

 Score =  229 bits (584), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 88/384 (22%), Positives = 151/384 (39%), Gaps = 38/384 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   I  +AL++N  ++     +             AV+K NAYG G E+        
Sbjct: 3   RPIFASISQSALRHNLATVRRHLDDVAAKADGTPPSIWAVIKANAYGHGIEQAVAGFSA- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
             Q   +  ++E V+ R       I +L G   P   +I+   +L   + +  Q    + 
Sbjct: 62  -AQGLAMLDLQEAVRCREAGWGGPILLLEGFFQPSDLEIVDRYHLATTVHTREQFDMLAH 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPS 171
                      +++++G NRLG +          +       +      ++H ACAD P 
Sbjct: 121 -ARLSRRVDIMVKLNSGMNRLGFAPDAYGSAYARAQQLHEYGVVGGIGKMTHFACADGPQ 179

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILL-----GPNYHFQLTRPGISLYGGTDKI 226
               + Q+  F    +H  G  +   S++ +       G +      RPGI LYG +   
Sbjct: 180 G--VTQQMNVFNGATAHLAGATSVCNSAATLRYADLAVGHDGQTHWVRPGICLYGASPFA 237

Query: 227 NKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +       +   +T  + +I I+   AG  V YG   +  R   I V A GYADGYP   
Sbjct: 238 DAQAGAFGLIPAMTLRSELIAIQDIPAGAAVGYGAIFRADRPMRIGVVACGYADGYPRHA 297

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IK 342
                        G    + G    ++G+++MDM M D+    +  +G  + ++G D   
Sbjct: 298 G-----------TGTPLTVGGVRTRLVGRVSMDMLMVDLDPVPAAGIGTPVVLWGEDGPS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VA A+GT  Y+LL  +  R  
Sbjct: 347 VDEVAEAAGTIGYELLCALAPRVP 370


>gi|116329770|ref|YP_799489.1| alanine racemase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116332652|ref|YP_802369.1| alanine racemase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116122663|gb|ABJ80556.1| Alanine racemase [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116127519|gb|ABJ77611.1| Alanine racemase [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 379

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 93/389 (23%), Positives = 162/389 (41%), Gaps = 34/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M       ++I   +L NN +S  + L   +   A++K NAYG G + +A      GV  
Sbjct: 1   MKETASSWIEISKRSLSNNLNSFRSILRPGSTLTAILKSNAYGHGTDLMAKLCIEEGVSH 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVL-YGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
             V S+EE   +R   P+  I ++    +P + K         +I S P+      L S 
Sbjct: 61  IGVNSIEEAQSIRQIDPKIPILIMGEIQNPEKRKEALSDPNFWIIFSRPETARI--LSSL 118

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
             +    L++DTG  RLG   +             +    +     +  D      + +Q
Sbjct: 119 NPAPKLHLKIDTGMGRLGNHGETLKYTLGELKKNGITLDGICTHFASTEDVLEHKYSLMQ 178

Query: 179 LERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI------- 226
           +++F   +       YK +   + +S+  +L  + H+++ R GISLYG    I       
Sbjct: 179 IQKFEKAVLLAESLGYKNLIRHMCASASTMLFSSAHYEMVRVGISLYGLWPSIQTRLSLN 238

Query: 227 ---NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
              NK+  +  +++ + RI+ I+   A   + YG   + +  + +A+  IGY +G    L
Sbjct: 239 LNGNKNFQLSPILSWKTRIVHIQNHPADSYIGYGSTFQTSYPTKVAIVPIGYYEGLDRKL 298

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD--- 340
           S             G   + G    I+G+I M+MTM D+T     +VG  + + G D   
Sbjct: 299 S-----------SNGDMLVLGKRARIIGRICMNMTMLDVTHISGADVGSVVTVIGQDGEE 347

Query: 341 -IKLDDVALASGTTNYDLLVRIGTRYAKF 368
            I  DD+A  + T NY++  RI     + 
Sbjct: 348 LITADDIADRTHTINYEITTRISESVCRI 376


>gi|171741011|ref|ZP_02916818.1| hypothetical protein BIFDEN_00077 [Bifidobacterium dentium ATCC
           27678]
 gi|283455601|ref|YP_003360165.1| alanine racemase [Bifidobacterium dentium Bd1]
 gi|171276625|gb|EDT44286.1| hypothetical protein BIFDEN_00077 [Bifidobacterium dentium ATCC
           27678]
 gi|283102235|gb|ADB09341.1| alr Alanine racemase [Bifidobacterium dentium Bd1]
          Length = 452

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 159/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL AL++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLAALRDNMRHLVSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQ-ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY---- 112
                    E + LR       R  +L  ++ G      +     +  SV  L       
Sbjct: 84  TWLGTAQSHEALLLRKAGIGLDRCHILTWVYNGTAVPFAELVANDIDVSVGSLGGIDGVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 EAARRLGKTARVHVKVDSGFGRNGFTPAGFDAALAKLVPLVKEGVLHVVGQWSHLAVADA 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +          LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIENFKDFTRRMEAAGIAPEIRHLANTAATLSRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  IGYA
Sbjct: 264 GYEADPAMGTPGTYGLKPAMTLQAQLGTVKDVEAGHGISYGRTYLTPTDTSTAIVPIGYA 323

Query: 277 DGYPLTLSGLDSEHSPS-VFLGGKGFI----KGYMVPILGKITMDMTMFDIT---DSLSI 328
           DG   + SG D E +   V  GG   +       +  + G++ MD  + D+    D+L I
Sbjct: 324 DGIHRSASGFDMEGAKHVVKAGGPVRVMTAEGPRLYRVSGRVCMDQFILDLHGSADALGI 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD   A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYAEPTADDWGRAADTISYEIFTCLRNRIPRLY 431


>gi|254221103|pdb|3HUR|A Chain A, Crystal Structure Of Alanine Racemase From Oenococcus Oeni
          Length = 395

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 84/386 (21%), Positives = 153/386 (39%), Gaps = 36/386 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFV 62
           +    + +DL A  +N   +   +   +  AV+K + YGLG   +A A    A      V
Sbjct: 7   HRPTWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I+VL        K+  D +++    ++P L +   L     + 
Sbjct: 67  SNLDEALELRQADLTLPIWVLGAWDYSDLKLFIDHDIVI---TIPSLAWLQNLPDFEGTL 123

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQ 178
             +L +DTG  R+G     E               L  + +H A AD   + S      Q
Sbjct: 124 KVSLAIDTGMTRIGFDKADEISAAKKIIDKNPQLDLFSVYTHFATADEAGEKSKAYFEEQ 183

Query: 179 LERFRTLI--SHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINK----- 228
           L R++ L     +     S+A+S+  +     P   F   RPG  + G      +     
Sbjct: 184 LRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAAIRPGQLISGVNVSNGELKMPP 243

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++ + +  + I  +R     + +SYG  +++  D  +A    GY DG+   +     
Sbjct: 244 NLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQ---- 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLD 344
                        I G  +PI+G+ITMD TM  +       +G  + +     G  I ++
Sbjct: 300 --------KSSVIINGKRMPIIGRITMDQTMVKLDRKYP--IGTRVTLIGKDGGEQITVE 349

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +VA  S T   ++   +  R  + YT
Sbjct: 350 EVANYSHTIVDEIQTTLAPRIKRIYT 375


>gi|298529139|ref|ZP_07016542.1| alanine racemase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510575|gb|EFI34478.1| alanine racemase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 371

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 103/381 (27%), Positives = 168/381 (44%), Gaps = 29/381 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L++ I   ++++N+  ++  +  AR  AVVK +AYG G E+ A  L+ AG   F V SV
Sbjct: 1   MLKVHIQTRSIEDNFAFLSRRT-TARVMAVVKADAYGHGLEETARCLHQAGADRFGVGSV 59

Query: 66  EEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHP 123
           +EG +LR       I+ L G   P    ++    +IP I S  QL    +       + P
Sbjct: 60  QEGARLRDCLDAPEIYSLLGPVSPEDYHLLARHRIIPFIHSREQLKALQEASCSFRGTIP 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLERF 182
            A++++TG NRLG    +  +        +  +L ++ SHL+ AD          QL+ F
Sbjct: 120 VAIKLETGMNRLGFRGGDLHELLETWEKCRGLKLHMLASHLSLADSVQGRQEVLRQLKTF 179

Query: 183 RTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-----KSHPMQ 233
                   +     E SLA+S+ IL  P  H    RPGISLYG     +     K   + 
Sbjct: 180 EDYCRTMQARGHEFEKSLANSAAILAHPETHLDCVRPGISLYGDNPFEHTPWASKGEGLA 239

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +   A ++ +     G  VSYG      RD  IAV   GYAD Y   LS         
Sbjct: 240 QAMHVRAPVLAVHHLEKGAGVSYGLCFTAPRDMRIAVIGCGYADNYSRGLSNR------- 292

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
               G    +G  +P+LG++ M +++ D + +  I  G  + + G +    +   ++A  
Sbjct: 293 ----GWMLYQGRRMPVLGRVCMQLSVVDASHAGDIAPGCEVYVLGGEGRQLLSAREMAGW 348

Query: 350 SGTTNYDLLVRIGTRYAKFYT 370
             + +Y++   +G    + Y+
Sbjct: 349 LDSISYEIFCSLGK-NPRTYS 368


>gi|294785981|ref|ZP_06751268.1| alanine racemase [Fusobacterium sp. 3_1_27]
 gi|294486318|gb|EFG33681.1| alanine racemase [Fusobacterium sp. 3_1_27]
          Length = 356

 Score =  229 bits (583), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 103/375 (27%), Positives = 164/375 (43%), Gaps = 34/375 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +IA  L   GV+ F V ++
Sbjct: 2   RTWIEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSIEIAKILKEVGVKFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L+   ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQ---LQFLVDKNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVNEAEKVIEFCKNNNL-NLVGIFSHLSDSDGNTVETKNFTLEQIEKF 177

Query: 183 RTLISH-YKGIEASLASSSGIL--LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           + +++     +E    S+S  +     +    L R GI +Y  T    K+  ++ + T +
Sbjct: 178 KKIVNSLNLNLEYIHISNSAGITNFHNDILGNLVRLGIGMYSFTGN-KKTPYLKNIFTIK 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R++ I+K      VSYG    L  DS  AV  IGYADG    LS            G  
Sbjct: 237 SRVLFIKKVNKDSFVSYGRHYTLPADSTYAVLPIGYADGLKKYLS-----------KGSY 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN--- 354
             I  +   I+G I MDMTM  I   +   I++G+ + +   DI LD++           
Sbjct: 286 VLINNHRCEIIGNICMDMTMIRIPKEIENSIKIGNEVTVINADI-LDNLN-----IPELC 339

Query: 355 -YDLLVRIGTRYAKF 368
            ++ +  IG R  + 
Sbjct: 340 VWEFMTGIGKRVKRI 354


>gi|313888487|ref|ZP_07822154.1| alanine racemase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845516|gb|EFR32910.1| alanine racemase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 385

 Score =  229 bits (583), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 83/381 (21%), Positives = 147/381 (38%), Gaps = 31/381 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
               ++IDL   +NN   +    G      +VVK +AY LG   ++    + G+  + V 
Sbjct: 7   RPAWIEIDLDKFENNMKIIKDKVGEKTEVMSVVKSDAYRLGALPLSQVSLDLGINYYAVA 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SH 122
           ++ E + LR    +  I +L        +     ++   I S+      ++L        
Sbjct: 67  TLSEALSLRKKFDEVNILILGYTPRHLYEDAIKNHITLTIYSLNDALVLNELAGNLKEEA 126

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +  D+G +R+G    +      +   K        I     A +        Q + F
Sbjct: 127 KIHIAFDSGMSRIGFMPSDEAKKEISEIFKLEKINVEGIFSHFAACETDPEFTDRQFKTF 186

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGG--TDKINKSHPMQTV 235
              I        +     +A+S  +L    Y   + RPGI  +G   +D + +   ++ +
Sbjct: 187 TNFIDELGELGCRFKFRHIANSHSVLFHDEYDLDMVRPGIIQFGYTDSDHLPEEFGLEEI 246

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ +A+I  IR+   GE V Y    K  RD+ +    +GYAD +P  LS           
Sbjct: 247 LSLKAQISSIREVKKGETVGYERFYKCPRDTKVVTLPLGYADAFPRILS----------- 295

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              +  I G     +G I MD  M D TD    ++GD + + G     +IK+ D+ + SG
Sbjct: 296 EKIEVLINGKRCKQIGLICMDQMMVDATDV-DCKIGDDVVLIGKQGDEEIKVRDICIHSG 354

Query: 352 ---TTNYDLLVRIGTRYAKFY 369
              T+    +     R  K+Y
Sbjct: 355 DCETS---FITHFNRRLPKYY 372


>gi|300173959|ref|YP_003773125.1| alanine racemase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888338|emb|CBL92306.1| alanine racemase [Leuconostoc gasicomitatum LMG 18811]
          Length = 376

 Score =  228 bits (582), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 93/378 (24%), Positives = 157/378 (41%), Gaps = 27/378 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
               + ID  A++ N   +   +G  R   VVK N YG G      ALY  GV+DF V +
Sbjct: 12  RPSWIAIDSEAIQENARIIMQYTGAKRLIGVVKANGYGFGAVATVKALYEIGVRDFAVAT 71

Query: 65  VEEGVKLR-LYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + E   LR   T      +L G+       I+   +L P +  +  L    KL+  G   
Sbjct: 72  IAEAAILRQEVTYDDFQILLLGVQDVAFVDIMVAYHLSPAVGDLSWLQQAVKLIPEGKVL 131

Query: 123 PYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              L +DTG  R+G   Q +  +      +    QL    +H A ADD +      Q+E 
Sbjct: 132 EVQLAIDTGMGRMGAHSQSQVKEMYEFIQSSDKLQLMGAFTHFATADDNNQSYYDHQVEN 191

Query: 182 FRTLI--SHYKGIEASLASSSGILLG-PNYHFQLTRPGISLYGGT---DKINKSHPMQTV 235
           F   +  ++       LA+S   L      +    R G  LYG      + +    +++V
Sbjct: 192 FYKWVHGANIPEKYWHLANSGSALWHKKEINIHTIRVGSVLYGYNPGAPERDMPIKLKSV 251

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++ ++RI  + +  AGE VSYG      R   +A   IGYADGY   ++G+         
Sbjct: 252 LSLKSRIGFVHELQAGESVSYGATYTAERPQWVATLPIGYADGYLRRMTGM--------- 302

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
              +  I G++  ++G++TMD  +  +     +     + + G     +I L++ A  + 
Sbjct: 303 ---RVLIAGHVEHVIGRVTMDQIVISLDKKYPVN--TEVTLIGQDGDEEITLEEFAEYAK 357

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  +++     +R  + Y
Sbjct: 358 TIPHEISTTFSSRLPRIY 375


>gi|283851833|ref|ZP_06369110.1| alanine racemase [Desulfovibrio sp. FW1012B]
 gi|283572749|gb|EFC20732.1| alanine racemase [Desulfovibrio sp. FW1012B]
          Length = 373

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 32/385 (8%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++ +LR ++ L  +  N+  +  L G  R  AV+K +AYG G  + A  L  AG   F 
Sbjct: 3   IAHNYLRTRVRLDHIAANYKRLAGLGG--RVLAVIKADAYGHGLLETARVLTGAGCDGFA 60

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           V SV EG  LR   P+A I  L G   P  + +I   ++IP I    QL   +   +   
Sbjct: 61  VGSVAEGAALRAAIPRAAIVSLLGPVLPEDDAMILGHSIIPFIHDFGQLERLAGRAARKR 120

Query: 121 -SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQ 178
                AL+ DTG  RLG    +  +      +    +++++ SHLA ADDP++    + Q
Sbjct: 121 VKARVALKFDTGMARLGFVEADVPELLKRLEDMPAIEVAMVGSHLATADDPAAFAFVAEQ 180

Query: 179 LERFRTLISHYK----GIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDKINKS---- 229
            E F  + +  +      E SL +S+GI+   + + F+  R GI+LYG    +       
Sbjct: 181 GEGFGRICAALRRAGLAFEGSLCNSAGIMAHADRFGFETRRAGIALYGVNPFLGTDRETL 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +   +    RI+ +    AG  VSYG      RD  +AV A GYAD Y   LS    
Sbjct: 241 GQGLVAAMETVTRIVSVHDVAAGRSVSYGRTFTAERDMRVAVVAAGYADAYSRGLSN--- 297

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                    G   + G  VPI+G++ M +T  D+T       GD I + G      +  +
Sbjct: 298 --------AGAMCLAGKRVPIVGRVCMQLTAVDVTGIA-CAPGDVIHLLGGQGPEAVTAN 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           DVA   GT  Y++L   G    + Y
Sbjct: 349 DVAGWWGTIPYEVLCLFGL-NPREY 372


>gi|73542215|ref|YP_296735.1| alanine racemase region [Ralstonia eutropha JMP134]
 gi|72119628|gb|AAZ61891.1| Alanine racemase region [Ralstonia eutropha JMP134]
          Length = 366

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 21/345 (6%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVL 83
             L+  ++  AVVK NAYG G  ++ PAL  A    F +  + E V+LR       I +L
Sbjct: 22  RRLAPASKVWAVVKANAYGHGIARVYPAL--ASADGFALLDLHEAVQLRELGWTGPILLL 79

Query: 84  YGIHPG-QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV----DTGFNRLGLS 138
            G        ++    L   +    QL         G   P ++ +    ++G NRLG S
Sbjct: 80  EGFFDESDIALLASLRLTTAVHGEEQLRMLEIASRDGRLPPRSIDICLKLNSGMNRLGFS 139

Query: 139 LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLAS 198
            +          +    +    +SH + AD       + Q   FR +     G + S+A+
Sbjct: 140 PESYGAAWRRLRDVAAVKSVTHMSHFSDADTQKG--VAEQAAIFRAVTRGLPG-QISIAN 196

Query: 199 SSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEARIILIRKALAGELV 254
           S+  +   + H    R GI LYG       +      +Q   T  +RI+ ++  L G+ V
Sbjct: 197 SATTMRHADCHADWVRAGIMLYGAAPSGCAADLSGTGLQAAQTLTSRILGVQDLLPGQSV 256

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314
            YG     TR   I + A GYADGYP T S      +P         +   +   +G+++
Sbjct: 257 GYGSHYVATRRQRIGIVACGYADGYPRTSSSHADHFAP-------VRVGDRLTRTVGRVS 309

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
           MDM   D+++     VG  ++++G  + +DDVA A+GT  Y+L+ 
Sbjct: 310 MDMLAVDLSECPEANVGSPVELWGRHVPIDDVAAAAGTIGYELMC 354


>gi|90419483|ref|ZP_01227393.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336420|gb|EAS50161.1| putative alanine racemase [Aurantimonas manganoxydans SI85-9A1]
          Length = 384

 Score =  228 bits (582), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 141/380 (37%), Positives = 200/380 (52%), Gaps = 16/380 (4%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           HS     ++ID  AL  NW  + A +  ART A VK + YGLG  + A  L+ AG +DFF
Sbjct: 6   HSERMPVVEIDRAALAANWALLAARNPGARTGAAVKADGYGLGAAETARTLHAAGCRDFF 65

Query: 62  VTSVEEGVKLRLYTP----------QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT- 110
           V   EEG  +R               ARIFVL G+ P    +  D  LIPV+S+   +  
Sbjct: 66  VAWAEEGRIVRAALDALTHPDDGTAPARIFVLQGLEPDSVSLHLDAGLIPVLSTPGDIAV 125

Query: 111 FYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP 170
           + + L + G   P A+Q++TG +RLGL      +   +        L+L++SHLA AD+P
Sbjct: 126 WCNGLKAAGRRAPAAIQLETGMHRLGLDRA-DAEAAADLAASGELDLALVMSHLASADEP 184

Query: 171 SSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           +      Q  RF  L + + G+  SLA+S+ + LG  + F LTRPGI+LYGG        
Sbjct: 185 TDQSARQQA-RFLELAALFPGVPRSLANSAAVFLGSEFGFDLTRPGIALYGGEAGPASRG 243

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V    A I+ IR A AGE   YG    LTRD+ IA   +GYADGY    SG     
Sbjct: 244 VLRPVARLTAAILQIRTANAGEAAGYGAAAPLTRDTRIATVGLGYADGYHRAASG-AGVA 302

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVAL 348
              V  G +  + G  VP+LG+++MD+T+ D+TD     +  GD  + FGP++ +D VA 
Sbjct: 303 VRDVRPGPQAVVAGQRVPVLGRVSMDLTLLDVTDVPDNALVPGDRAEFFGPNMSIDAVAN 362

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
           A+GT  Y+LL  +G R  + 
Sbjct: 363 AAGTIAYELLTGLGPRVERR 382


>gi|116491612|ref|YP_811156.1| alanine racemase [Oenococcus oeni PSU-1]
 gi|116092337|gb|ABJ57491.1| alanine racemase [Oenococcus oeni PSU-1]
          Length = 386

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 84/386 (21%), Positives = 153/386 (39%), Gaps = 36/386 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFV 62
           +    + +DL A  +N   +   +   +  AV+K + YGLG   +A A    A      V
Sbjct: 6   HRPTWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I+VL        K+  D +++    ++P L +   L     + 
Sbjct: 66  SNLDEALELRQADLTLPIWVLGAWDYSDLKLFIDHDIVI---TIPSLAWLQNLPDFEGTL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQ 178
             +L +DTG  R+G     E               L  + +H A AD   + S      Q
Sbjct: 123 KVSLAIDTGMTRIGFDKADEISAAKKIIDKNPQLDLFSVYTHFATADEAGEKSKAYFEEQ 182

Query: 179 LERFRTLI--SHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINK----- 228
           L R++ L     +     S+A+S+  +     P   F   RPG  + G      +     
Sbjct: 183 LRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAAIRPGQLISGVNVSNGELKMPP 242

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++ + +  + I  +R     + +SYG  +++  D  +A    GY DG+   +     
Sbjct: 243 NLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQ---- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLD 344
                        I G  +PI+G+ITMD TM  +       +G  + +     G  I ++
Sbjct: 299 --------KSSVIINGKRMPIIGRITMDQTMVKLDRKYP--IGTRVTLIGKDGGEQITVE 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +VA  S T   ++   +  R  + YT
Sbjct: 349 EVANYSHTIVDEIQTTLAPRIKRIYT 374


>gi|291617673|ref|YP_003520415.1| DadB [Pantoea ananatis LMG 20103]
 gi|291152703|gb|ADD77287.1| DadB [Pantoea ananatis LMG 20103]
          Length = 356

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 34/374 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  +   ID  AL++N   +   +  +R  +VVK NAYG G  ++  +L       F + 
Sbjct: 2   SRPIVATIDQQALRHNLAIVRRAAPTSRVWSVVKANAYGHGIARVWESLSA--TDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G     +  + D   +                +      
Sbjct: 60  NMEEAILLREQGWKKPILLLEGFFHPDDLALIDRYRLTTSVHSNWQIHALANATLSAPVD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG   ++     H     +      +++H A A++P   V  ++     
Sbjct: 120 LYLKINSGMNRLGFRPEQVNGIWHKLRALENVGDITLMAHFADAENPDGIVEPLKRI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  H+   RPGI LYG +   N     S  ++ V+T  
Sbjct: 177 AQATEGLDSPVSLSNSACTLWHPEAHYDWVRPGIILYGASPSGNWQDIASSGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II +++  AG+ V YG +   T+   I V A GYADGYP                G  
Sbjct: 237 SEIIGVQQLQAGDGVGYGYRYHATQPQRIGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKL------DDVALASGT 352
             + G M  ++G ++MDM   D+T      +G  ++++G     +      +  A++   
Sbjct: 286 VAVDGIMTQVVGAVSMDMITVDLTPCPQAGIGSSVELWGKMSKSIRWRKQPERWAMS--- 342

Query: 353 TNYDLLVRIGTRYA 366
               L+  +  R  
Sbjct: 343 ----LMCALAPRVP 352


>gi|33596460|ref|NP_884103.1| alanine racemase, catabolic [Bordetella parapertussis 12822]
 gi|33566229|emb|CAE37137.1| alanine racemase, catabolic [Bordetella parapertussis]
          Length = 375

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 88/384 (22%), Positives = 151/384 (39%), Gaps = 38/384 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR---------TAAVVKDNAYGLGCEKIAPALYNA 55
             +   I  +AL++N  ++     +             AV+K NAYG G E+        
Sbjct: 3   RPIFASISQSALRHNLATVRRHLDDVAAKADGTPPSIWAVLKANAYGHGIEQAVAGFSA- 61

Query: 56  GVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
             Q   +  ++E V+ R       I +L G   P   +I+   +L   + +  Q    + 
Sbjct: 62  -AQGLAMLDLQEAVRCREAGWGGPILLLEGFFQPSDLEIVDRYHLATTVHTREQFDMLAH 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPS 171
                      +++++G NRLG +          +       +      ++H ACAD P 
Sbjct: 121 -ARLSRRVDIMVKLNSGMNRLGFAPDAYGSAYARAQQLHEYGVVGGIGKMTHFACADGPQ 179

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILL-----GPNYHFQLTRPGISLYGGTDKI 226
               + Q+  F    +H  G  +   S++ +       G +      RPGI LYG +   
Sbjct: 180 G--VTQQMNVFNGATAHLAGATSVCNSAATLRYADLAVGHDGQTHWVRPGICLYGASPFA 237

Query: 227 NKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +       +   +T  + +I I+   AG  V YG   +  R   I V A GYADGYP   
Sbjct: 238 DAQAGAFGLIPAMTLRSELIAIQDIPAGAAVGYGAIFRADRPMRIGVVACGYADGYPRHA 297

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IK 342
                        G    + G    ++G+++MDM M D+    +  +G  + ++G D   
Sbjct: 298 G-----------TGTPLTVGGVRTRLVGRVSMDMLMVDLDPVPAAGIGTPVVLWGEDGPS 346

Query: 343 LDDVALASGTTNYDLLVRIGTRYA 366
           +D+VA A+GT  Y+LL  +  R  
Sbjct: 347 VDEVAEAAGTIGYELLCALAPRVP 370


>gi|212716821|ref|ZP_03324949.1| hypothetical protein BIFCAT_01760 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660106|gb|EEB20681.1| hypothetical protein BIFCAT_01760 [Bifidobacterium catenulatum DSM
           16992]
          Length = 524

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 101/408 (24%), Positives = 160/408 (39%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +D+ AL+NN   + ++ G          VVK +AYG G    A A    G 
Sbjct: 96  QKQYPAQAIVDMAALRNNMRHLVSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGA 155

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G+    +++I +   I V S        
Sbjct: 156 TWLGTAQSHEALLLRKAGIGPDRCHILTWVYNGMAVPFDELIDNDIDISVGSLPGIDGVA 215

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 216 AAARRLGKTARVHVKVDSGFGRNGFTPATFDAALAKLVPLAKEGVLHIVGQWSHLAVADA 275

Query: 170 PSSH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +          LA+++  L  P  HF+LTRPGI LY
Sbjct: 276 PDVPEFVASTDRQVENFKDFTRRMEVAGIAPEIRHLANTAATLSRPEIHFELTRPGIGLY 335

Query: 221 GGTDKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  +GYA
Sbjct: 336 GYEADPAMGTPGTYDLTPAMTLQAQLGTVKDVEAGHGISYGRTYLTPTDTSTAIVPVGYA 395

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDSLS---I 328
           DG   + SG D E +  V   GG   +       +  + G++ MD  M D+  S     +
Sbjct: 396 DGIHRSASGFDMEGAKHVIKPGGPVRVMTTEGPRLYRVSGRVCMDQFMLDLHGSAEKLGV 455

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +Q+FGP       +   DD   A+GT +Y++   +  R  + Y
Sbjct: 456 HEGDTVQLFGPGRGEDYAEPTADDWGRAAGTISYEIFTCLCNRIPRLY 503


>gi|239906401|ref|YP_002953142.1| alanine racemase [Desulfovibrio magneticus RS-1]
 gi|239796267|dbj|BAH75256.1| alanine racemase [Desulfovibrio magneticus RS-1]
          Length = 374

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 109/376 (28%), Positives = 163/376 (43%), Gaps = 30/376 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +LR +I    +  N+  +   +   +  +V+K +AYG G  + A AL  AG + F V 
Sbjct: 5   HNYLRTRIRTENIVANYTRLR--AQGGQVVSVIKADAYGHGLLETATALAGAGCESFAVG 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           S  EG  LR     A I  L G   P  E +I + NL+P +    QL   +      G  
Sbjct: 63  SAAEGAALRDAGCTAEILSLLGPVLPEDELLIIEKNLVPFMHDFDQLARLAVACTRLGRV 122

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQLE 180
              AL+ DTG  RLG    +A             ++ ++ SHLA ADDP +    + Q  
Sbjct: 123 AKVALKFDTGMARLGFVEADAPKLAEMLCASPCIEVVMVSSHLATADDPGAFEFVAEQGA 182

Query: 181 RFRTLISHYKG----IEASLASSSGILLGPNYH-FQLTRPGISLYGGTDKINKS-----H 230
           RF  +    +       ASL +S+GIL       F   R GI+LYG       +     H
Sbjct: 183 RFARICQALRHGGLTFRASLCNSAGILAHAGAIGFDARRAGIALYGVNPFAGSAREALGH 242

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            +   +    RI+ +     G  +SYG      RD  +A+ A GYAD Y   LS      
Sbjct: 243 GLLPAMETVTRIVSVHDLPRGASISYGRTYVAERDMRVAIVAAGYADAYSRGLSN----- 297

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                  G   + G  VPILG++ M +T  D++   ++  GD I + G +    +  DD+
Sbjct: 298 ------KGFMCLAGRRVPILGRVCMQLTAVDVSGLDAVRPGDAIHLLGGEGPGAVTADDL 351

Query: 347 ALASGTTNYDLLVRIG 362
           AL  GT  Y++   +G
Sbjct: 352 ALWWGTIPYEVFCLLG 367


>gi|306823362|ref|ZP_07456737.1| alanine racemase [Bifidobacterium dentium ATCC 27679]
 gi|304553069|gb|EFM40981.1| alanine racemase [Bifidobacterium dentium ATCC 27679]
          Length = 452

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 159/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL AL++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLAALRDNMRHLVSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     ++++ +   + V S        
Sbjct: 84  TWLGTAQSHEALLLRKAGIGLDRCHILTWVYNGTAVPFDELVANDIDVSVGSLGGIDGVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 EAARRLGKTARVHVKVDSGFGRNGFTPAGFDAALAKLVPLVKEGVLHVVGQWSHLAVADA 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +          LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIENFKDFTRRMEAAGIAPEIRHLANTAATLSRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  IGYA
Sbjct: 264 GYEADPAMGTPGTYGLKPAMTLQAQLGTVKDVEAGHGISYGRTYLTPTDTSTAIVPIGYA 323

Query: 277 DGYPLTLSGLDSEHSPS-VFLGGKGFI----KGYMVPILGKITMDMTMFDIT---DSLSI 328
           DG   + SG D E +   V  GG   +       +  + G++ MD  + D+    D+L I
Sbjct: 324 DGIHRSASGFDMEGAKHVVKAGGPVRVMTVEGPRLYRVSGRVCMDQFILDLHGSADALGI 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD   A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYAEPTADDWGRAADTISYEIFTCLRNRIPRLY 431


>gi|309777378|ref|ZP_07672339.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914919|gb|EFP60698.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 398

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 140/381 (36%), Gaps = 30/381 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +++L  L  N   + AL     +  +V+K + YG G  ++A  + +     F V S  E
Sbjct: 21  AQVNLQQLLENTKKVKALLKPQTKLLSVLKADGYGHGAVQVARTIEDES-DWFAVASFYE 79

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
             +LR +     I V   +     +     ++     S       +       +     +
Sbjct: 80  AKELREHGITKPILVFGFLDDSHVEEAVQRDITCSALSYEYAMHLAHLCEQKKLRLSMHI 139

Query: 127 QVDTGFNRLGLSLQE--------ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           ++DTGF+RLG+   E         +   + +    +  +    S               Q
Sbjct: 140 KLDTGFHRLGIDCDENRLQEAYEEVRQLYETEALHITGIYTHFSTAGSKVAQDEAFLKRQ 199

Query: 179 LERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYG-GTDKINKSHPM 232
            + F  ++                +S   L  P  H  + R G+ LYG G+D   +   +
Sbjct: 200 YQLFCEILQCLKEDQIDPGIRHCCNSKATLTNPEMHLDMVRVGLYLYGLGSDADIEYLKL 259

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + +V  +ARI  IR+   GE + Y       +   I V ++G+ADGY   L         
Sbjct: 260 KPIVNWKARIYAIREVAQGEGIGYSRTFITPKPMRIGVVSLGFADGYARCL--------- 310

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    + G    ILGKI MD+ M D+TD     V D + + G      I  + +  
Sbjct: 311 YASNKVYVLVHGKKTRILGKICMDVMMIDLTDIPEAVVNDTVTVLGCDGEQHISANLLGK 370

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
            +G T  ++   +G R  + Y
Sbjct: 371 ETGGTAVEITCGMGKRVKRVY 391


>gi|239918156|ref|YP_002957714.1| alanine racemase [Micrococcus luteus NCTC 2665]
 gi|281415657|ref|ZP_06247399.1| alanine racemase [Micrococcus luteus NCTC 2665]
 gi|239839363|gb|ACS31160.1| alanine racemase [Micrococcus luteus NCTC 2665]
          Length = 401

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 90/386 (23%), Positives = 155/386 (40%), Gaps = 39/386 (10%)

Query: 9   LKIDLTALKNNWHSMN---ALSGNAR--TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           ++IDL A+++N   +         +R    AVVK +AYG G   +A A   AG     V 
Sbjct: 15  VRIDLAAVRHNVGVLRERIRRPDGSRPLLTAVVKADAYGHGAVAVARAAAAAGADRLGVA 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT--------NLIPVISSVPQLTFYSKL 115
            V E + LR       +               +           +   +   +       
Sbjct: 75  HVREALALRAAGVPLPVLAWLHTGATDFAAAVEAEVTLGVSGWDLDAAADAVRGLRARGG 134

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSS 172
                     L+ DTG  R G + +    F   +   +   L ++  + SHL  AD+P  
Sbjct: 135 AGPEARAVLHLKADTGLGRHGCTPERWPAFVARAAELEAAGLVRVEGVFSHLGVADEPDR 194

Query: 173 HV-NSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
               + QL RF  + +         +   LA++   L  P+ H  + R G+ LYG +   
Sbjct: 195 AAETTAQLLRFERMAAEAAETLGHPLLRHLANTPATLARPDTHLDMVRVGLGLYGLSPFA 254

Query: 227 N---KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                   ++  ++    +  ++   AG+ VSYG +      + + +  +GYADG P   
Sbjct: 255 EVTAAELGLRPAMSLVTVLANVKAVPAGQGVSYGFRHVTAEPTTLGLVPVGYADGVPR-- 312

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP--DI 341
                     V  G +  + G  VP++G+I MD  + D+    +   GD +++FGP   I
Sbjct: 313 ----------VVEGTRVHVGGRTVPVVGRIAMDQFVVDLGPDAADAPGDAVELFGPASGI 362

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAK 367
            +++ A A+GT NY+L+ RIG R  +
Sbjct: 363 PVEEWAAAAGTINYELVTRIGGRVDR 388


>gi|238026883|ref|YP_002911114.1| alanine racemase [Burkholderia glumae BGR1]
 gi|237876077|gb|ACR28410.1| Alanine racemase [Burkholderia glumae BGR1]
          Length = 356

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 86/344 (25%), Positives = 139/344 (40%), Gaps = 20/344 (5%)

Query: 27  SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI 86
           +  ++  AVVK NAYG G  +  P L   G   F +  V+E V+LR       I +L G 
Sbjct: 25  APRSKVWAVVKANAYGHGLARAFPGLR--GTDGFGLLDVDEAVRLRELGWAGPILLLEGF 82

Query: 87  HPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
               +  + D   +             +           L++++G NRLG S+ +     
Sbjct: 83  FRSTDVDVIDRYSLTTALHNDDQMRMLETARLSKPVNILLKMNSGMNRLGYSVDKYRAAW 142

Query: 147 HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGP 206
             +          +++H A AD       + Q+  F        G    LA+S+ ++   
Sbjct: 143 ERARTCPGIGQITLMTHFADADGERG--VAAQMAAFERGAEGIAGAR-CLANSAAVMWHA 199

Query: 207 NYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKL 262
             H    RPGI LYG +            +Q  +T  + +I ++   AG+ V YGG    
Sbjct: 200 QTHHDWVRPGILLYGASPSGRAADIADAGLQPAMTLASELIAVQSIKAGDAVGYGGAFVA 259

Query: 263 TRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI 322
           T+   I V A GYADGYP                G    + G    I+G+++MDM   D+
Sbjct: 260 TQAMRIGVVACGYADGYPR-----------VAPEGTPVLVDGVRTRIVGRVSMDMITVDL 308

Query: 323 TDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           T      +G  ++++G  + +DDVA    T  Y+L+  +  R  
Sbjct: 309 TPVPQAGIGARVELWGRALPVDDVAAHCATVGYELMCAVAQRVP 352


>gi|126640203|ref|YP_001083187.1| alanine racemase 2 PLP-binding, catabolic [Acinetobacter baumannii
           ATCC 17978]
          Length = 343

 Score =  228 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/350 (23%), Positives = 134/350 (38%), Gaps = 26/350 (7%)

Query: 28  GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH 87
            N++  AVVK NAYG G E++  A        F +  ++E  ++R       I +L GI 
Sbjct: 2   PNSKVFAVVKANAYGHGIERVYEAFKA--ADGFALLDLDEAKRIRALGWTGPILLLEGIF 59

Query: 88  -PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
            P          L   I S  Q+ +  +           L++++G NRLG   Q  +   
Sbjct: 60  SPQDLFDCVQYQLSFTIHSEAQIEWVEQH-PYPAQFDVFLKMNSGMNRLGFKPQHYVQAW 118

Query: 147 HNSFNKKLGQLSLIISHLACADD--PSSHVNSVQLERFRTLISHYKGIEASLASSSGILL 204
               N         + H + AD           Q+  F  ++    G  +   S++ +  
Sbjct: 119 ERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAFEEIVKDLPGERSVSNSAAILRY 178

Query: 205 GPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQK 260
                    R GI LYG +            +Q  ++  + II ++     E V YG   
Sbjct: 179 QDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNF 238

Query: 261 KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMF 320
              +   I + A GYADGY                 G    +       +G+++MDM   
Sbjct: 239 VAEQPMTIGIVACGYADGYQRI-----------SPTGTPVLVDSVRTRTVGRVSMDMLAV 287

Query: 321 DITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNYDLLVRIGTRY 365
           D+T   S +VG  + ++G       + +DDVA++SGT  Y+L+  +  R 
Sbjct: 288 DLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARV 337


>gi|225350823|ref|ZP_03741846.1| hypothetical protein BIFPSEUDO_02397 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158279|gb|EEG71521.1| hypothetical protein BIFPSEUDO_02397 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 527

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 100/408 (24%), Positives = 159/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +D+ AL+NN   + ++ G          VVK +AYG G    A A    G 
Sbjct: 99  QKQYPAQAIVDMAALRNNMRHLVSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGA 158

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G+    +++I +   I V S        
Sbjct: 159 TWLGTAQSHEALLLRKAGIGPDRCHILTWVYNGMAVPFDELIDNDIDISVGSLPGIDGVA 218

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 219 AAARRLGKTARVHVKVDSGFGRNGFTPATFDAALAKLVPLAKEGVLHIVGQWSHLAVADA 278

Query: 170 PSSH----VNSVQLERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +          LA+++  L     HF+LTRPGI LY
Sbjct: 279 PDVPEFVASTDRQIENFKDFTRRMEQAGIAPEIRHLANTAATLSRSEIHFELTRPGIGLY 338

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  +GYA
Sbjct: 339 GYEADPAMGTPGTYGLTPAMTLQAQLGTVKDVEAGHGISYGRTYLTPSDTSTAIVPVGYA 398

Query: 277 DGYPLTLSGLDSEHSPS-VFLGGKGFI----KGYMVPILGKITMDMTMFDITDSLS---I 328
           DG   + SG D E +   V  GG   +       +  + G++ MD  M D+  S     +
Sbjct: 399 DGIHRSASGFDMEGAKHVVKPGGPVRVMTTEGPRLYRVSGRVCMDQFMLDLHGSAEKLGV 458

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +Q+FGP       +   DD   A+GT +Y++   +  R  + Y
Sbjct: 459 HEGDTVQLFGPGRGEDYAEPTADDWGRAAGTISYEIFTCLCNRIPRLY 506


>gi|255264281|ref|ZP_05343623.1| alanine racemase [Thalassiobium sp. R2A62]
 gi|255106616|gb|EET49290.1| alanine racemase [Thalassiobium sp. R2A62]
          Length = 345

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 128/362 (35%), Positives = 194/362 (53%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL+A+  NW +++ +S  + TAAVVK N YGLG  ++A AL  AG + FFV + EE 
Sbjct: 6   LTIDLSAVIANWKALDQIS-TSETAAVVKANGYGLGSRRVARALARAGARKFFVATAEEA 64

Query: 69  VKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R     +  I++  G   G   +I D  LIP+++S+ Q+      +    +HP+ +Q
Sbjct: 65  ANVRNVLGDEHEIYIFAGHMSGDTDMISDLGLIPLLNSLDQMV---MHLEALPNHPFGVQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+   E       + ++      LI+SHLACAD+P    N++QL  FR++  
Sbjct: 122 LDTGMNRLGMEPAEWGAVRDMALSQ---NPKLIMSHLACADEPDHTQNAMQLTSFRSMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILLG +YHF LTRPG+ LYGG    N       VV  +  +I +R 
Sbjct: 179 GVS-VPRSLAATGGILLGSDYHFDLTRPGVGLYGGAPFANAK----PVVQLDIPVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R S IA  + GYADG    +SG  +            + +G   
Sbjct: 234 VAVGEAVGYGASWVAERPSKIATISAGYADGLIRAMSGQATL-----------WHEGIPC 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P+ G+++MD+   D+TD        Y+ I  P+  +DD+A  +GT  Y++L  +G RY++
Sbjct: 283 PLAGRVSMDLLTVDVTDLPIPPR--YLSILCPEQSVDDLAAVAGTIGYEILTSLGGRYSR 340

Query: 368 FY 369
            +
Sbjct: 341 RF 342


>gi|303246677|ref|ZP_07332955.1| alanine racemase [Desulfovibrio fructosovorans JJ]
 gi|302492017|gb|EFL51895.1| alanine racemase [Desulfovibrio fructosovorans JJ]
          Length = 373

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 104/385 (27%), Positives = 167/385 (43%), Gaps = 32/385 (8%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++ +LR ++ L  +  N+  + +  G+    AV+K +AYG G  + A AL  AG   F 
Sbjct: 3   IAHNYLRTRVRLDNIVANYKHLCSFGGH--VLAVIKADAYGHGLVETARALAGAGCDAFA 60

Query: 62  VTSVEEGVKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CG 119
           + SV EG  LR      A + ++  + P  + ++ D ++ P I    QL   + L +  G
Sbjct: 61  IGSVAEGAALRQSGCAGAIVSLVGPVLPEDDAMVLDFDVTPFIHDFDQLARLAALAAGQG 120

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-HVNSVQ 178
                AL+ DTG  RLG    +              ++ +  SHLA ADDP++      Q
Sbjct: 121 KKARVALKFDTGMARLGFCECDVPHLLETLRGMPAIEVVMASSHLATADDPNAFDFVGEQ 180

Query: 179 LERFRTLISHYKG----IEASLASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---- 229
             +F  +    +     +EASL +S+GIL    ++ F+  R GI+LYG       +    
Sbjct: 181 GSKFARVCQGLRDGGLTLEASLCNSAGILAHATDFGFEARRAGIALYGVNPFAGTAREPL 240

Query: 230 -HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
              +   +    RI+ +    +G  +SYG      RD  +A+ A GYAD Y   LS    
Sbjct: 241 GAGLVPAMETVTRIVSVHDLASGCSISYGRTYTAERDMRVAIVAAGYADAYSRGLSNR-- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLD 344
                    G   + G  V I+G++ M +T  DIT       GD I + G +    I  +
Sbjct: 299 ---------GYMCLAGKRVAIVGRVCMQLTAVDITGV-DAAPGDVIHLLGGEGLGAITAE 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFY 369
           D+A    T  Y++    G    + Y
Sbjct: 349 DLATWWETIPYEVFCLFGL-NPREY 372


>gi|289706579|ref|ZP_06502929.1| alanine racemase [Micrococcus luteus SK58]
 gi|289556714|gb|EFD50055.1| alanine racemase [Micrococcus luteus SK58]
          Length = 401

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 90/386 (23%), Positives = 155/386 (40%), Gaps = 39/386 (10%)

Query: 9   LKIDLTALKNNWHSMNAL---SGNAR--TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            +IDL A+++N   +         +R    AVVK +AYG G   +A A   AG     V 
Sbjct: 15  ARIDLAAVRHNVGVLQERIRCPDGSRPLLTAVVKADAYGHGAVAVARAAAAAGADRLGVA 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT--------NLIPVISSVPQLTFYSKL 115
            V E + LR    +  +               +           +  ++           
Sbjct: 75  HVREALALRAAGVRLPVLAWLHTGATDFAAAVEAEVTLGVSGWDLDAVADAVCGLRGRGG 134

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSS 172
                     L+ DTG  R G   +    F   +   +   L ++  + SHL  AD+P  
Sbjct: 135 AGPEARAVLHLKADTGLGRHGCPPERWPAFVERAAELEAAGLVRVEGVFSHLGVADEPDR 194

Query: 173 HV-NSVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
               + QL RF  + +         +   LA++   L  P+ H  + R G+ LYG +   
Sbjct: 195 AAETTAQLLRFERMAAEAAETLGHPLLRHLANTPATLSRPDTHLDMVRVGLGLYGLSPFA 254

Query: 227 N---KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
           +       ++  ++    +  ++   AG+ VSYG +      + + +  +GYADG P   
Sbjct: 255 DVTAAELGLRPAMSLVTVLANVKAVPAGQGVSYGFRHVTAEPTTLGLVPVGYADGVPR-- 312

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP--DI 341
                     V  G +  + G  VP++G+I MD  + D+    +   GD +++FGP   I
Sbjct: 313 ----------VVEGTRVHVGGRTVPVVGRIAMDQFVVDLGPDATDAPGDAVELFGPASGI 362

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAK 367
            +++ A A+GT NY+L+ RIG R  +
Sbjct: 363 PVEEWAAAAGTINYELVTRIGGRVDR 388


>gi|94269682|ref|ZP_01291535.1| Alanine racemase region [delta proteobacterium MLMS-1]
 gi|93451122|gb|EAT02055.1| Alanine racemase region [delta proteobacterium MLMS-1]
          Length = 378

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 110/378 (29%), Positives = 157/378 (41%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             ID  AL++N+  +  L S +    AVVK +AYG G    A A   AG   F V +VEE
Sbjct: 8   AVIDRGALRHNYRLLRRLLSPDVGIMAVVKADAYGHGLVPSATAFAVAGAACFGVATVEE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYAL 126
           GV LR    +  I VL G+ P         NL PV+         S+    G       L
Sbjct: 68  GVALRQAGIEGEIVVLLGLGPEGVVEAVSRNLSPVVFDSAIPAALSRQAVAGNREVGVHL 127

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           +VD G  RLGL+   AL            +L+ ++SH   AD   +     +  R    I
Sbjct: 128 KVDLGMGRLGLAPAAALQLAAEIHRLPGLRLAGLLSHFPLADQREAAAACRRQWRQLAAI 187

Query: 187 SHYKG------IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT-----V 235
                          LA+S+G+L        L RPG+SLYG +        M        
Sbjct: 188 GEEVAALGGGRPRLHLANSAGLLRFAEARGDLVRPGLSLYGYSPLDFPVAGMDWAELRPA 247

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +  ++RI+ I++  AG  +SYG +   T  + +AV  +GYADGYP  +SG          
Sbjct: 248 MALKSRIMQIKELPAGSGISYGHRFVTTGPTRLAVIPLGYADGYPRGVSGRAL------- 300

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
                 I G  VP+ G I M+  + +I    +  VGD +   G      I   ++A    
Sbjct: 301 ----VLIGGKRVPLRGTICMNACLAEIDAVPAARVGDEVVFMGRQGEEVIDAAEIAGWHQ 356

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y++L R G    + Y
Sbjct: 357 TIPYEILCRFGAANKREY 374


>gi|118472399|ref|YP_885954.1| alanine racemase [Mycobacterium smegmatis str. MC2 155]
 gi|3913029|sp|P94967|ALR_MYCSM RecName: Full=Alanine racemase
 gi|166969419|sp|A0QSR6|ALR_MYCS2 RecName: Full=Alanine racemase
 gi|1813550|gb|AAC45589.1| D-alanine racemase [Mycobacterium smegmatis]
 gi|118173686|gb|ABK74582.1| alanine racemase [Mycobacterium smegmatis str. MC2 155]
          Length = 389

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 99/378 (26%), Positives = 162/378 (42%), Gaps = 26/378 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +  IDL A+ +N   +  L+G+A   AVVK +AYG G   +A     AG     V ++ 
Sbjct: 16  AQTVIDLGAIDHNVRVLRELAGSADVMAVVKADAYGHGALPVARTALAAGAAALGVATIP 75

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E + LR     A +                 ++   +SS  QL    +     G +    
Sbjct: 76  EALALREGGITAPVLAWLHPPGTDFAPAIAADVEVAVSSRRQLEQVTAAAAEVGRTATVT 135

Query: 126 LQVDTGFNR---LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           ++VDTG +R         E LD    +      ++  ++SHL   DDP +  N +Q +R 
Sbjct: 136 VKVDTGLSRNGVGAADYPEVLDVLRRAQADGAIRVRGLMSHLVHGDDPENPFNGLQGQRL 195

Query: 183 RTL--ISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVV 236
             +   +   G++     L +S   +  P+  F++ RPGISLYG +    +    ++  +
Sbjct: 196 ADMRVYAREHGVDYEVAHLCNSPAAMTRPDLAFEMVRPGISLYGLSPIPERGDMGLRPAM 255

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +  + L+R   AG+ VSYG +    RD+ + +  IGYADG    LSG           
Sbjct: 256 TLKCPVALVRSVHAGDGVSYGHRWVADRDTTLGLLPIGYADGVYRALSGRID-------- 307

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGP----DIKLDDVALASG 351
                IKG     +G+I MD  + D+   +  + VGD   +FGP    +    D A    
Sbjct: 308 ---VLIKGRRRRAVGRICMDQFVVDLGPDADDVAVGDDAILFGPGANGEPTAQDWAELLD 364

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T +Y+++     R  + Y
Sbjct: 365 TIHYEVVTSPRGRVTRTY 382


>gi|297192661|ref|ZP_06910059.1| alanine racemase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151457|gb|EFH31178.1| alanine racemase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 369

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 29/351 (8%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKII 94
           VVK +AYG G    A A   AG       +  E + LR    ++R+        G  +  
Sbjct: 16  VVKSDAYGHGMVPCARAALAAGATWLGTATPHEALALRAAGVESRVMCWLWTPGGPWREG 75

Query: 95  FDTNLIPVISSVPQLTFY-SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT---HNSF 150
            + +L   +S +  L    +   + G      L+ DTG  R G    +  +       + 
Sbjct: 76  IEADLDMSLSGMWALEEVTAAAKAAGRPARVQLKADTGLGRNGCQPADWPELVAAARTAE 135

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIE-----ASLASSSGILLG 205
           +  L +++ + SH ACAD+P     + QL  FR ++ H +          +A+S   L  
Sbjct: 136 DDGLVRVTGLWSHFACADEPGHPSIAAQLAVFRDMVDHAEKAGIDPEVRHMANSPATLTV 195

Query: 206 PNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKK 261
           P  HF L R GI++YG +            ++ V+T  A + L++   AG  VSYG    
Sbjct: 196 PESHFDLVRTGIAMYGISPAPELGTPADFGLRPVMTLAASVALVKHVPAGHGVSYGHHYV 255

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
              ++ + +  +GYADG P   SG            G   + G    + G++ MD  + D
Sbjct: 256 TDDETTLGLIPVGYADGIPRHASG-----------KGPVLVAGEWRRVAGRVAMDQFVVD 304

Query: 322 ITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +  + ++  G    +FGP    +   +D A A+ T  Y+++ RIGTR  + 
Sbjct: 305 LGGT-TVPEGTEAILFGPGDRGEPTAEDWAQAADTIAYEIVTRIGTRVPRV 354


>gi|306820851|ref|ZP_07454474.1| alanine racemase [Eubacterium yurii subsp. margaretiae ATCC 43715]
 gi|304551123|gb|EFM39091.1| alanine racemase [Eubacterium yurii subsp. margaretiae ATCC 43715]
          Length = 371

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 163/380 (42%), Gaps = 23/380 (6%)

Query: 1   MH-SNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           MH S+     +I L+ + +N +      S      AVVK +AYG G  +++  +    V 
Sbjct: 2   MHISSNRAVARISLSNILHNINEFKKCKSKKLNICAVVKADAYGHGSVEVSKFIEQY-VD 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
            F V++ +E ++LR    +  I +L  +   + + +  +++   + ++   +  +K+   
Sbjct: 61  YFAVSTGDEAIELRNSQIKKPILILGYVFDNEVENLIRSDVEFTVYNIKIASTINKIAKK 120

Query: 118 CGVSHPYALQVDTGFNRLGLSLQE-ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +     +++DTG +R+G   Q+  ++      N    ++    SH + A++  + +N 
Sbjct: 121 NNLMAKVHIKLDTGMSRIGFLSQDNYVEEIKTVNNLSNIRIVGCFSHFSNAEETKNVINE 180

Query: 177 VQLERFRTLIS----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSH 230
           VQ E F+ +          +     S+S      NY   + R GI +YG +  D  ++  
Sbjct: 181 VQYELFQMMCKKIESENIDLGIKHISNSAASEKNNYDLDMVRLGIGMYGYSYNDVKDEKL 240

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  E+ I  I+    G  VSY G+  L  D  IA   IGYADG   +LS  + + 
Sbjct: 241 DLKPAMKLESLISNIKLLKKGCKVSYSGKYTLEEDEWIATIPIGYADGISRSLSCKNFDV 300

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALA 349
                        G     +G I MD  M  +     + +G  + IFG  +    ++A  
Sbjct: 301 ---------VLDNGIKGISVGNICMDQMMIKLPQ--EVAIGTKVNIFGYDNDSGYNIAKL 349

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           + T  Y+++  I  R  + Y
Sbjct: 350 ADTIIYEIVCGINKRVKREY 369


>gi|192360177|ref|YP_001981190.1| alanine racemase [Cellvibrio japonicus Ueda107]
 gi|190686342|gb|ACE84020.1| alanine racemase [Cellvibrio japonicus Ueda107]
          Length = 379

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 117/378 (30%), Positives = 182/378 (48%), Gaps = 22/378 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M ++  + L IDL A+  NWH +   ++ +   AAVVK NAYGLG   +  AL   G   
Sbjct: 13  MITSSGI-LTIDLHAICANWHFLKNQVAPHVDVAAVVKANAYGLGAVPVVRALRKEGCTT 71

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           FF  + EE +   L        VL G+  G E    +  L PV+ S+  +  ++    +C
Sbjct: 72  FFFATKEEALASGLNGEHCLKIVLSGVRSGDEPFFVEGQLTPVLYSLADVQRWNAYAKNC 131

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               P  L+VDTG  R+G+S++E   F     +  +     ++SHLACAD PS   N  Q
Sbjct: 132 CKRLPCILKVDTGMTRMGMSIEELEAFCEAHASIHI-APLFLMSHLACADTPSHPANQRQ 190

Query: 179 LERFRTLIS----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           L+ F+  +      +  I+ASLA+S+GILLG ++HF L RPG +LYG        + ++ 
Sbjct: 191 LQLFKQALDIAQVRFPEIKASLANSAGILLGADWHFDLVRPGAALYGINPVSGIPNLLKP 250

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+T    ++ IR       V Y         S +AV A GYADG   TL           
Sbjct: 251 VITLSLPVLQIRSLQHDAYVGYSATHFAKAGSRLAVVAGGYADGIHRTLGFKPLAQ---- 306

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLS---IEVGDYIQIFGPDIKLDDVALASG 351
                    G     +G+++MD  +FDI+        +VGDY+++    + L+ +   + 
Sbjct: 307 -------FNGMAFEAVGRVSMDSCVFDISQCPENRLPQVGDYLEVVNESLSLNFLMERNA 359

Query: 352 TTNYDLLVRIGTRYAKFY 369
           +  Y++L  +GTR+ + Y
Sbjct: 360 SLGYEVLNSLGTRFHRIY 377


>gi|170016499|ref|YP_001727418.1| alanine racemase [Leuconostoc citreum KM20]
 gi|169803356|gb|ACA81974.1| Alanine racemase [Leuconostoc citreum KM20]
          Length = 370

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 78/375 (20%), Positives = 150/375 (40%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +++I   ALKNN   +  +SG  +    VK NAYGLG    A A    GV    V  
Sbjct: 7   RPTQIEISQKALKNNVAVVKRVSGAEKIFLAVKSNAYGLGLIPTAKAAVAGGVYGLAVAI 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L        +++   +++  + S+  L   ++ ++       
Sbjct: 67  IDEALALRHERITAPILILGISPAEYAELMAVQHIMATVVSLDWLQEAAQYLTGEQRLHV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKL--GQLSLIISHLACADDPSSHVNSVQLERF 182
           +L VDTG  R+G   +++L    +             + +H A +D   +   ++QL+R+
Sbjct: 127 SLGVDTGMGRIGFRDRQSLSEAIDYVQAHRDIFDYVGLATHFAESDSADTDYFNMQLQRW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVT 237
             L       E      S + +        ++ R G  LYG      +    +    V+ 
Sbjct: 187 HKLTDGLPEPEYYHVANSGAAMYHANEVPHEVIRVGTVLYGVEPSRGELWDGRELAPVMA 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +  +++  AGE +SY  +   + +  I    IGY DG+   ++G            
Sbjct: 247 LRSEMNFVKELPAGEGISYSHKYTTSENEWIGTVPIGYGDGWLRKMTGF----------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G   PI+G++ MD  M  +     +  G  + + G D      ++DVA  +   
Sbjct: 296 -HVIVDGQYAPIVGQVAMDQLMIRLPHEYPV--GTKVTLIGKDGGLENTIEDVAQHADLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            ++++  +  R  + 
Sbjct: 353 PWEIMTGMQDRLHRI 367


>gi|120603074|ref|YP_967474.1| alanine racemase [Desulfovibrio vulgaris DP4]
 gi|254802362|sp|A1VF31|ALR_DESVV RecName: Full=Alanine racemase
 gi|120563303|gb|ABM29047.1| alanine racemase [Desulfovibrio vulgaris DP4]
          Length = 376

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + + L ++  N+  +  ++   R   V+K +AYG G E +  AL   G ++  V +V EG
Sbjct: 10  VVVSLQSIIANYRRIRTVAQ--RPMPVIKSDAYGHGLEAVGMALEAEGARECAVGTVGEG 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYALQ 127
            KLR     A I  L G    ++  +  ++ I      +  L   +   +       AL+
Sbjct: 68  AKLRKAGFGADIVALLGALDREDAQLAASSGIIPTVLDIAGLERLAAQGTTERPVRVALK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLI 186
            DTG  RLG +  +              +  + +SHLA ADDP  S     Q   F  ++
Sbjct: 128 FDTGMARLGFTEHDVSALCERLRTLPSVRPVMAVSHLAVADDPTQSAFTMAQGAAFARIM 187

Query: 187 S----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ-----TVVT 237
           +    ++  I  SL++S+  L  P  H+ + RPGI+LYG       +           ++
Sbjct: 188 AGLRSNFPDIMGSLSNSAATLAHPQLHWDVQRPGIALYGSNPLRGTALARHGEGLLPAMS 247

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++ +    AG  +SYG     T+D+ +A+ A GYAD Y   LSG     +      
Sbjct: 248 VSVPVLQVHPLPAGRSISYGRTYTATKDATVAIIAAGYADNYSRALSGRGVAVA------ 301

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
                 G  VP+LG++ M  T  D+TD   I  GD + + G      +  D++A   GT 
Sbjct: 302 -----GGRRVPVLGRVCMQTTAIDVTDVPGIATGDRVWLLGGPGPATVSADELADLWGTI 356

Query: 354 NYDLLVRIGTRYAKF 368
           +Y++L  +G    + 
Sbjct: 357 SYEVLCLLGMNPRRH 371


>gi|296110973|ref|YP_003621354.1| alanine racemase [Leuconostoc kimchii IMSNU 11154]
 gi|295832504|gb|ADG40385.1| alanine racemase [Leuconostoc kimchii IMSNU 11154]
          Length = 370

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 85/375 (22%), Positives = 154/375 (41%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +++I   ALK+N   +   SG  +    VK NAYGLG    + A    GV    V  
Sbjct: 7   RPTQIEISKQALKHNTEVVKKTSGADKIFLAVKSNAYGLGLIPTSKAAVAGGVYGLAVAI 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L        +++   +++  + S+  L   ++ +S       
Sbjct: 67  IDEALALRHERVTAPILILGISPAKYAELMAVQHILTTVVSLSWLKEAAQYLSGEQRLHV 126

Query: 125 ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           +L VDTG  R+G   +E  A    +   NK+L     + +H A +D  ++    +QL+R+
Sbjct: 127 SLGVDTGMGRIGFRDRESLAEAIAYLQENKQLFDYVGLATHFAESDSSNNDYFYMQLKRW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
             +       E      S + +        ++ R G  LYG      +      +Q V+ 
Sbjct: 187 HDMTDGLPEPEFYHVANSGAAMYHADEVPHEVVRVGTVLYGVEPSRGELADGKNLQPVMA 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +  ++   AGE +SY  +   T D  I    IGY DG+   ++G            
Sbjct: 247 LRSEMNFVKLLPAGEGISYSHKYTTTGDEWIGTVPIGYGDGWLRKMTGF----------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            K  + G+  PI+G++ MD  M  +     +  G  +   G D      ++DVA  +G  
Sbjct: 296 -KVIVDGHYAPIVGQVAMDQLMIRLPRQYPV--GTKVTFIGKDGGLENTIEDVAQHAGLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            ++++  +  R  + 
Sbjct: 353 PWEIMTGMQDRLHRV 367


>gi|294782996|ref|ZP_06748320.1| alanine racemase [Fusobacterium sp. 1_1_41FAA]
 gi|294479874|gb|EFG27651.1| alanine racemase [Fusobacterium sp. 1_1_41FAA]
          Length = 354

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 94/372 (25%), Positives = 154/372 (41%), Gaps = 30/372 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  L+ N     VVK NAYGLG  +IA  L   GV  F + ++
Sbjct: 2   RTWVEIDKENLKYNILKLKELADNREVLGVVKANAYGLGSVEIAKILQEVGVNFFGLANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    +A   +L      +       ++   ISS+ Q      L+   ++    
Sbjct: 62  EEVIELQEAGIKANFLILGASFEDELIEATKRDIHVAISSMQQ---LKFLVENNLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA +  +      L  L  I +HL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVYEAEEVINFCKTHNL-NLVGIFTHLSDSDGNTIDTKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + ++         +++S+GI                         K+  ++ V T ++++
Sbjct: 178 KNIVKGLDLKYIHISNSAGITNFHENILGNLVRAGIAMYSFTGNKKTPCLKNVFTIKSKV 237

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  +K      VSYG    L  DS  AV  IGYADG    L             GG   I
Sbjct: 238 LFTKKVNKDSFVSYGRHYTLPADSTYAVIPIGYADGLKKYL-----------TKGGYVLI 286

Query: 303 KGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----YD 356
             +   I+G I MDMTM  I   L   I++ D + +   DI +D++            ++
Sbjct: 287 NNHRCEIIGNICMDMTMVRIPKELEKTIKISDEVTVINADI-IDNLN-----IPEFCVWE 340

Query: 357 LLVRIGTRYAKF 368
            +  IG R  + 
Sbjct: 341 FMTGIGRRVKRI 352


>gi|46579368|ref|YP_010176.1| alanine racemase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81830473|sp|Q72DH4|ALR_DESVH RecName: Full=Alanine racemase
 gi|46448782|gb|AAS95435.1| alanine racemase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233193|gb|ADP86047.1| alanine racemase [Desulfovibrio vulgaris RCH1]
          Length = 376

 Score =  226 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 97/375 (25%), Positives = 162/375 (43%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + + L ++  N+  +  ++   R   V+K +AYG G E +  AL   G ++  V +V EG
Sbjct: 10  VVVSLQSIIANYRRIRTVAQ--RPMPVIKSDAYGHGLEAVGMALEAEGARECAVGTVGEG 67

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-SVPQLTFYSKLMSCGVSHPYALQ 127
            KLR     A I  L G    ++  +  ++ I      +  L   +   +       AL+
Sbjct: 68  AKLRKAGFGADIVALLGALDREDAQLAASSGIIPTVLDIAGLERLAAQGTPERPVRVALK 127

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLI 186
            DTG  RLG +  +              +  + +SHLA ADDP  S     Q   F  ++
Sbjct: 128 FDTGMARLGFTEHDVSALCERLRTLPSVRPVMAVSHLAVADDPTQSAFTMAQGAAFARIM 187

Query: 187 S----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ-----TVVT 237
           +    ++  I  SL++S+  L  P  H+ + RPGI+LYG       +           ++
Sbjct: 188 AGLRSNFPDIMGSLSNSAATLAHPQLHWDVQRPGIALYGSNPLRGTALARHGEGLLPAMS 247

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
               ++ +    AG  +SYG     T+D+ +A+ A GYAD Y   LSG     +      
Sbjct: 248 VSVPVLQVHPLPAGRSISYGRTYTATKDATVAIIAAGYADNYSRALSGRGVAVA------ 301

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
                 G  VP+LG++ M  T  D+TD   I  GD + + G      +  D++A   GT 
Sbjct: 302 -----GGRRVPVLGRVCMQTTAIDVTDVPGIATGDRVWLLGGPGPATVSADELADLWGTI 356

Query: 354 NYDLLVRIGTRYAKF 368
           +Y++L  +G    + 
Sbjct: 357 SYEVLCLLGMNPRRH 371


>gi|154486952|ref|ZP_02028359.1| hypothetical protein BIFADO_00785 [Bifidobacterium adolescentis
           L2-32]
 gi|154084815|gb|EDN83860.1| hypothetical protein BIFADO_00785 [Bifidobacterium adolescentis
           L2-32]
          Length = 455

 Score =  226 bits (575), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 163/408 (39%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL AL++N   + ++ G          +VK +AYG G    A A    G 
Sbjct: 27  QRRYPAQAIVDLAALRDNMRHLVSVVGGPHSGTAVMGIVKADAYGHGLVPAALAALAGGA 86

Query: 58  QDFFVTSVEEGVKLRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY---- 112
                    E + LR       R  +L  ++ G E    +     +  SV  L       
Sbjct: 87  TWLGTAQSHEALLLRKAGIGPDRCHILTWVYSGAEVPFDELVDNDIDISVGSLAGIDGVA 146

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 147 AAARRLGKTARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADA 206

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P          +Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 207 PDVPEFVASTDMQVETFKDFTRRMEAAGIPPEIRHLANTAATLSRPEIHFELTRPGIGLY 266

Query: 221 GGTDKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  +GYA
Sbjct: 267 GYEADPAMGTPSTYSLKPAMTLQAQLGTVKDVEAGHGISYGRTYLTPSDTSTAIVPLGYA 326

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   +       +  + G++ MD  + D+  S   L I
Sbjct: 327 DGIHRSASGFDMEGAKHVTKPGGPVRVMTSEGPRLYRVSGRVCMDQFILDLHGSAAELGI 386

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD   A+ T +Y++   +  R  + Y
Sbjct: 387 HEGDNVELFGPGRGEDYAEPTADDWGRAADTISYEIFTCLRNRIPRLY 434


>gi|294787104|ref|ZP_06752358.1| alanine racemase [Parascardovia denticolens F0305]
 gi|315226756|ref|ZP_07868544.1| alanine racemase [Parascardovia denticolens DSM 10105]
 gi|294485937|gb|EFG33571.1| alanine racemase [Parascardovia denticolens F0305]
 gi|315120888|gb|EFT84020.1| alanine racemase [Parascardovia denticolens DSM 10105]
          Length = 451

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 92/404 (22%), Positives = 158/404 (39%), Gaps = 40/404 (9%)

Query: 6   FLRLKIDLTALKNNWHSM----NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             ++ +DL  L++N  +M    +A+S +     VVK +AYG G    A A    G     
Sbjct: 27  PAQVVVDLATLRDNMKAMVDRVHAVSPSTAVLGVVKADAYGHGLLPTALAALAGGATWLG 86

Query: 62  VTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
                E + LR         +   ++  G     +++I     + V S            
Sbjct: 87  TAQSREALLLRQKGVGPDRARIITWLYNGRQDPFDRLISQDIDLAVGSLAGIDAIVRGAQ 146

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN---KKLGQLSLIISHLACADDPSSH 173
             G      ++VDTGF R G + +E                 ++    SHL+ AD P   
Sbjct: 147 KIGRPARVHVKVDTGFGRNGFTPEEFDQALTRLRQGVDAGQLEVVGQWSHLSVADAPEDP 206

Query: 174 ----VNSVQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
                   Q+  F                  LA+++     P  +F+L RPG+ LYG   
Sbjct: 207 ASRRATDDQIALFNEFTDRMKVAGLPPSIRHLANTAATFTRPEIYFELVRPGVGLYGYEP 266

Query: 225 KI----NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP 280
                  + + ++  +T +A++  ++   AG  +SYG       ++  A   +GYADG P
Sbjct: 267 DPVMGTGEDYGLKPAMTLQAQLGTVKNLPAGHSISYGRTYLTEGETSTADLPLGYADGIP 326

Query: 281 LTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDSLS---IEVGD 332
            + SG +   +  V   GG   I       +V + G++ MD  + D+  S     +  GD
Sbjct: 327 RSASGFNRAGALGVDHPGGPVRIMTNQGPRLVRVSGRVCMDQCILDLHGSAEDWGVSEGD 386

Query: 333 YIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +++FGP       +   DD A A+GT +Y++   +  R  + Y
Sbjct: 387 TVELFGPGRGEAYAEPTADDWARAAGTISYEIFTCLRNRIPRLY 430


>gi|119386397|ref|YP_917452.1| alanine racemase [Paracoccus denitrificans PD1222]
 gi|119376992|gb|ABL71756.1| alanine racemase [Paracoccus denitrificans PD1222]
          Length = 365

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 128/360 (35%), Positives = 182/360 (50%), Gaps = 27/360 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L ID+ A+  NW ++ A +  AR AAVVK +AYGLG +++AP LY AG +DFFV    EG
Sbjct: 29  LVIDIPAIVANWKALAARAPGARAAAVVKADAYGLGADRVAPPLYAAGARDFFVALASEG 88

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R   P  ARIFVL G   G +              +     + +  +     P+ +Q
Sbjct: 89  RAIRPLLPDDARIFVLSGHMEGADLAGLVPL-------LNSPEQFFRDRALRPRGPFGIQ 141

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +D+G NRLG+   E              + +LI+SHLACAD+P    N+ QL  FR +  
Sbjct: 142 LDSGMNRLGIEPGEWAAIR---AEALAARPALIMSHLACADEPDHPANAQQLAAFRAMTE 198

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
               +  SLA++ GILLGP+YHF L RPGI LYGG    +     + VVT    +I +R+
Sbjct: 199 GVT-VPRSLAATGGILLGPDYHFDLVRPGIGLYGGEPFADA----RPVVTLALPVIQVRE 253

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R S +A  A GYADG    L+        +   G         V
Sbjct: 254 VKPGESVGYGYAWTAARPSRVATVAAGYADGLARALARDGKLTLWAGERG---------V 304

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+I+MD+   D+TD   +     ++I      +DD+A  SGT  Y++L  +G RY +
Sbjct: 305 PVIGRISMDLITVDVTDLPDVPA--ALEILNARQGVDDLAALSGTIGYEILTSLGRRYER 362


>gi|296128394|ref|YP_003635644.1| alanine racemase [Cellulomonas flavigena DSM 20109]
 gi|296020209|gb|ADG73445.1| alanine racemase [Cellulomonas flavigena DSM 20109]
          Length = 394

 Score =  225 bits (574), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 80/381 (20%), Positives = 139/381 (36%), Gaps = 28/381 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M +     L + L A+ +N   +   +   R  AVVK + +GLG   +A      G    
Sbjct: 15  MLAATRPVLTVRLDAVAHNARVLA--ASARRLMAVVKADGFGLGAADVARTALAHGADAL 72

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-NLIPVISSVPQLTFYSKLMSCG 119
            V ++ E V+LR     A +                    + V S        S     G
Sbjct: 73  GVATLAEAVELRTARIGAPLLSWLDAPGADLSDAVLHGIDVAVPSLAHLEAAVSAGRRTG 132

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                 L +D G  R G   +           +      ++  ++ HLACA       N+
Sbjct: 133 RGVDVHLYLDCGTARDGCPPETWPALCAAAWRAELAGAVRVVGVMGHLACAASLDPEANT 192

Query: 177 VQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
               RF   ++  +          L +++ +L  P   F L+R G  L G          
Sbjct: 193 DATARFAHGVARARAAGLRPRVRHLGATAAVLGLPTTRFDLSRVGAGLVGIDPTGRYPV- 251

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           ++      A ++ +R   A   V Y    + +  + +A+  +GYADG P+T SG      
Sbjct: 252 LRAAAQVTAPVVQVRDVGADVGVGYDHTYRTSAPTRLALLPLGYADGLPVTASGR----- 306

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                  +  + G   P+ G+++MD  + D+ D   +  GD + + G        L + A
Sbjct: 307 ------AEVLVHGRRRPLAGRVSMDQVVVDVGDLA-VRTGDVVTVIGTGEDLAPTLTEWA 359

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
             +GT  ++LL  +G R  + 
Sbjct: 360 GWAGTLPHELLTGLGRRLVRH 380


>gi|300813596|ref|ZP_07093927.1| alanine racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512344|gb|EFK39513.1| alanine racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 388

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 29/369 (7%)

Query: 1   MHSN--EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+ N      ++++L    +N   + ++   N++   V+K + Y  G  ++  A    G+
Sbjct: 1   MYKNPTRSAWVEVNLDNYISNLKYIKSIINKNSKIMCVIKSDGYRAGALELTEASIKFGI 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLM 116
             F V ++ EG+ LR +     I +L        + +   +++P I S      Y     
Sbjct: 61  NYFGVATLSEGISLRKHFKDINILILGYTPSYLLEDLCKYDIMPNIYSYDNCKDYNEICK 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             G      L +DTG NR+G    +EA             ++  + SH A AD       
Sbjct: 121 KYGKVGKIHLSIDTGMNRVGFIPGKEAFFDIIKISKLSNIKIDGVFSHFAKAD-VDEDFT 179

Query: 176 SVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGT--DKINK 228
             Q + F +     +          +++S+ IL    Y   + RPG  ++G       ++
Sbjct: 180 KKQFDTFTSFTKEIENAGVNLGLKHISNSASILKHREYDLDMVRPGAIMHGLYKGFFKDE 239

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             P++  +   A I  I+    G+ VSYG +   T+D+ +    +GYADG+P  LSG  S
Sbjct: 240 KLPLKKDLQVFAMIANIKTIKKGQGVSYGHKYIATKDTKVVTIPLGYADGFPRILSGKFS 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        I G   P +G I MD  M D T     ++ D   + G     +I   
Sbjct: 300 -----------VLIGGKKCPQIGNICMDQFMVDATGI-DCKIDDVAVLLGKDGDEEISAF 347

Query: 345 DVALASGTT 353
           D+   +G  
Sbjct: 348 DLCQLTGDI 356


>gi|257462583|ref|ZP_05626993.1| alanine racemase, biosynthetic [Fusobacterium sp. D12]
 gi|317060235|ref|ZP_07924720.1| alanine racemase [Fusobacterium sp. D12]
 gi|313685911|gb|EFS22746.1| alanine racemase [Fusobacterium sp. D12]
          Length = 354

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 95/374 (25%), Positives = 153/374 (40%), Gaps = 32/374 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   L++N   +   +       V+K NAYGLG   +   L   G+  F V S+
Sbjct: 2   RAWVEIDTEHLRHNIREIQKRAEGLEVCGVIKANAYGLGVLPVTKILEEEGIHFFAVASL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE  ++R       I +L  +   +     +      +SS  +L + S+           
Sbjct: 62  EEAKEVRSAGIAGEILILGSLFHEEILEAEEAGFHINVSSREELEWISQHA---PKVKIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERF 182
           +++DTG  RLG S QE  D    +    L Q+S I SH + AD  S         Q+ERF
Sbjct: 119 IKIDTGMTRLGFSYQEGRDILAFAKQLSL-QISGIFSHFSDADGFSQEAQKYTETQIERF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
               +        + +S  ++   N     + R GI +YG           + VVT + +
Sbjct: 178 LPYANQKDIPYRHIFNSGALVQHRNQKIGNMVRAGICMYGILGSTPIPD-FKNVVTLKTK 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++  +K      VSYG    L +        IGYADG    L+            GGK  
Sbjct: 237 VLFKKKVEEDTYVSYGRLYCLKKGETYVTLPIGYADGVKKYLAN-----------GGKVE 285

Query: 302 IKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDI----KLDDVALASGTTNY 355
           I G + PI+G I MDM M  I ++L   I++G  + ++  +I     + +      T  +
Sbjct: 286 ILGELCPIIGAICMDMMMVKIPENLEDKIKIGTEVIVWNNEIIEKNNIPE------TCTW 339

Query: 356 DLLVRIGTRYAKFY 369
           D+   +G R  + Y
Sbjct: 340 DMFTALGRRVQRIY 353


>gi|326692928|ref|ZP_08229933.1| alanine racemase [Leuconostoc argentinum KCTC 3773]
          Length = 370

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 89/375 (23%), Positives = 152/375 (40%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +++I   ALKNN   +   SG  +    VK NAYGLG    + A    GV    V  
Sbjct: 7   RPTQIEISQKALKNNVAVVKQTSGADKIFLAVKSNAYGLGLIPTSKAAIAGGVYGLAVAI 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L        +++   +++ ++ S+  L   +  +S       
Sbjct: 67  IDEALALRHERLTAPILILGISPAQYAELMAVQHIMAMVVSLDWLKEAATYLSGEQRLHV 126

Query: 125 ALQVDTGFNRLGLSLQEAL--DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           +L VDTG  R+G   + AL     +   +  L     + +H A +D  ++    +QL R+
Sbjct: 127 SLGVDTGMGRIGFRDRAALAEAIAYVQAHHDLFDYVGLATHFAESDSANTDYFEMQLARW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
             L       E      S + +         + R G  LYG      +    H +Q V+ 
Sbjct: 187 HELTDGLPEPEYYHVANSGAAMYHADEVPHDVIRVGTVLYGVEPSRGELADGHELQPVMA 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + I  +++  AGE +SY  +   T D  I    IGY DG+   L+G +          
Sbjct: 247 LRSEINFVKQLPAGEGISYSHKYTTTGDEWIGTVPIGYGDGWLRKLTGFN---------- 296

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
               + G   PI+G+I MD  M  +     +  G  + + G D      L+DVA  +G  
Sbjct: 297 --VIVDGQYAPIVGQIAMDQMMIRLPHEYPV--GTKVTLIGRDGGLENTLEDVAQYAGLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            ++++  +  R  + 
Sbjct: 353 PWEIMTGMQDRLHRV 367


>gi|282883163|ref|ZP_06291762.1| alanine racemase [Peptoniphilus lacrimalis 315-B]
 gi|281296975|gb|EFA89472.1| alanine racemase [Peptoniphilus lacrimalis 315-B]
          Length = 388

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 29/369 (7%)

Query: 1   MHSN--EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+ N      ++++L    +N   + ++   N++   V+K + Y  G  ++  A    G+
Sbjct: 1   MYKNPTRSAWVEVNLDNYISNLKYIKSIINKNSKIMCVIKSDGYRAGALELTEASVKFGI 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLM 116
             F V ++ EG+ LR +     I +L        + +   +++P I S      Y     
Sbjct: 61  NYFGVATLSEGISLRKHFKDINILILGYTPSYLLEDLCKYDIMPNIYSYDNCKDYNEICK 120

Query: 117 SCGVSHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             G      L +DTG NR+G    +EA             ++  + SH A AD       
Sbjct: 121 KYGKVGKIHLSIDTGMNRVGFIPGKEAFFDIIKISKLSNIKIDGVFSHFAKAD-VDEDFT 179

Query: 176 SVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGT--DKINK 228
             Q + F +     +          +++S+ IL    Y   + RPG  ++G       ++
Sbjct: 180 KKQFDTFTSFTKEIENAGVNLGLKHISNSASILKHREYDLDMVRPGAIMHGLYKGFFKDE 239

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
             P++  +   A I  I+    G+ VSYG +   T+D+ +    +GYADG+P  LSG  S
Sbjct: 240 KLPLKKDLQVFAMIANIKTIKKGQGVSYGHKYIATKDTKVVTIPLGYADGFPRILSGKFS 299

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLD 344
                        I G   P +G I MD  M D T     ++ D   + G     +I   
Sbjct: 300 -----------VLIGGKKCPQIGNICMDQFMVDATGI-DCKINDVAVLLGKDGDEEISAF 347

Query: 345 DVALASGTT 353
           D+   +G  
Sbjct: 348 DLCQLTGDI 356


>gi|126735551|ref|ZP_01751296.1| alanine racemase [Roseobacter sp. CCS2]
 gi|126714738|gb|EBA11604.1| alanine racemase [Roseobacter sp. CCS2]
          Length = 345

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 129/360 (35%), Positives = 191/360 (53%), Gaps = 26/360 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL A+  NW +++A++ + +TAAVVK N YGLG   +A AL+ AGV+ FFV   EE 
Sbjct: 6   LIIDLDAVVANWRALDAMT-DCKTAAVVKANGYGLGAANVAKALFKAGVRQFFVAVAEEA 64

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R    P+  I V  G   G   II +  L P+++SV Q    +  +     HP+ +Q
Sbjct: 65  AAIREELGPKPEISVFSGHMAGDTDIIRELGLTPMLNSVEQ---LTHHLETLPGHPFGVQ 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLG+ +QE       +  +   +  L++SHLACAD+P   +N  QL +F+ +  
Sbjct: 122 LDTGMNRLGMEMQEWAAVAELALAQ---KPRLVMSHLACADEPDHPMNPYQLAQFKKMTD 178

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
                  SLA++ GILLGP YHF LTRPGI LYGG      S     V+  +  +I +R 
Sbjct: 179 GITA-PRSLAATGGILLGPEYHFDLTRPGIGLYGGLPFAQAS----PVIELDLPVIQVRD 233

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE+V YG   + TR S IA  + GYADG    LS   +            +      
Sbjct: 234 VAEGEVVGYGNVWQATRASRIATVSAGYADGIARILSDKATL-----------YHGDTPC 282

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++ +++MD+   D+TD         + + GP   +DD+A A+ T  Y++L ++G RY +
Sbjct: 283 PLVSRVSMDLLTIDVTDLTE--TPKKLTLIGPHQGVDDLAQAANTIGYEVLTQLGDRYNR 340


>gi|223986552|ref|ZP_03636550.1| hypothetical protein HOLDEFILI_03866 [Holdemania filiformis DSM
           12042]
 gi|223961492|gb|EEF66006.1| hypothetical protein HOLDEFILI_03866 [Holdemania filiformis DSM
           12042]
          Length = 371

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 22/364 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +++DL  +K N   +   + + +  AV+K N YG G   +A A   AG     V+S++E
Sbjct: 7   WVEVDLDQIKENIRWLRRQT-DRQFIAVIKANGYGAGDGPVARAALEAGAAMLAVSSLDE 65

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            + LR     A + +L  + P Q +++   +L     S+  +    ++   G      L+
Sbjct: 66  ALSLRYQGITAPVLILGVVDPSQAELLLRYDLAVPAVSLDWVKELVQIPVRG--LRVHLK 123

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG +R+G    + L        +    +  I +H AC+D+P + +   Q  RF  ++ 
Sbjct: 124 VDTGMHRIGTGNLDELQAMLTLLQENGALVEGIFTHFACSDNPDNGMTDDQAARFEHIVR 183

Query: 188 HYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                   +   +S   +  P       R G++++G T       P    V+  +R++ +
Sbjct: 184 ALDTPFRWVHSSNSDAAVHYPKAPGNAVRCGLAMFGVTSYATALKPC---VSLYSRLVYV 240

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           +   AG+ V YG      ++  I    IGYADG+     G             + +I+G 
Sbjct: 241 KALPAGQPVGYGATYTTQKEEWIGTLPIGYADGWIRKHQGR------------QCWIEGE 288

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
               +G+I MD  M  +  +  +  G  +++FGP + L+ VA   GT  Y++L  +  R 
Sbjct: 289 TGDFVGRICMDQAMIRLPHAFPV--GTKVELFGPHLPLEQVARELGTIPYEVLTLLSDRL 346

Query: 366 AKFY 369
           AK Y
Sbjct: 347 AKVY 350


>gi|261338093|ref|ZP_05965977.1| alanine racemase [Bifidobacterium gallicum DSM 20093]
 gi|270276712|gb|EFA22566.1| alanine racemase [Bifidobacterium gallicum DSM 20093]
          Length = 466

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 160/415 (38%), Gaps = 51/415 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-------NARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
             +  +DL AL++N   +  +               VVK +AYG G    A A    G  
Sbjct: 31  PAQAIVDLAALRDNMRHLVEIVNADPAKPHRTEVMGVVKADAYGHGLVPAALAALAGGAT 90

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD----TNLIPVISSVPQLTFYSK 114
                   E ++LR          +        ++ +D     ++   + +   +   +K
Sbjct: 91  WLGTAQAHEALELRRAGIGPERARILTWVNDPYEVPYDELLRQHIDVSVGTPDAVEQLAK 150

Query: 115 LMSC---------GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIIS 162
                         +     ++VDTGF R G +L +           +   L +++   S
Sbjct: 151 AAEAVQRFVRGADPIVAHVHVKVDTGFGRNGFTLNQLDLIAPRLKQLQDAGLFEITGQWS 210

Query: 163 HLACADDPSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLT 213
           HLA AD P           Q+ RF     H +  GIE     LA+++  L  P  H+ L 
Sbjct: 211 HLAVADAPDVPEFVHETDEQVARFEEFTRHMQEAGIEPRIRHLANTAATLSRPEIHYDLV 270

Query: 214 RPGISLYGGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
           RPG++LYG         P        +T +A++  ++    G  +SYG        + +A
Sbjct: 271 RPGVALYGYEPDPAMGTPQDYGLTPAMTLQAQLSSVKHVPQGTGLSYGRVYVTDAPTSVA 330

Query: 270 VAAIGYADGYPLTLSGLDSEHSPS-VFLGGKGFI---KGYMVPIL-GKITMDMTMFDITD 324
           +  +GYADG   + SG D   S      GG        G  V  + G++ MD  + D+  
Sbjct: 331 IVPVGYADGIHRSASGFDRCGSRHEDRKGGPVAFMTRDGVQVRHVSGRVCMDQFIVDLHG 390

Query: 325 S---LSIEVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
               L I++GD +Q+FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 391 DAKELGIDIGDTVQLFGPGRGEAYGEPTADDWAKAADTISYEIFTCLRNRVPRLY 445


>gi|119025514|ref|YP_909359.1| alanine racemase [Bifidobacterium adolescentis ATCC 15703]
 gi|118765098|dbj|BAF39277.1| alanine racemase [Bifidobacterium adolescentis ATCC 15703]
          Length = 452

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 102/408 (25%), Positives = 163/408 (39%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL AL++N   + ++ G          +VK +AYG G    A A    G 
Sbjct: 24  QRRYPAQAIVDLAALRDNMRHLVSVVGGPHSGTAVMGIVKADAYGHGLVPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY---- 112
                    E + LR       R  +L  ++ G E    +     +  SV  L       
Sbjct: 84  TWLGTAQSHEALLLRKAGIGPDRCHILTWVYSGAEVPFDELVDNDIDISVGSLAGIDGVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARRLGKTARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADA 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P          +Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDMQVETFKDFTRRMEAAGIPPEIRHLANTAATLSRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  +SYG       D+  A+  +GYA
Sbjct: 264 GYEADPAMGTPSTYSLKPAMTLQAQLGTVKDVEAGHGISYGRTYLTPSDTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   +       +  + G++ MD  + D+  S   L I
Sbjct: 324 DGIHRSASGFDMEGAKHVTKPGGPVRVMTSEGPRLYRVSGRVCMDQFILDLHGSAAELGI 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD   A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDNVELFGPGRGEDYAEPTADDWGHAADTISYEIFTCLRNRIPRLY 431


>gi|114769303|ref|ZP_01446929.1| alanine racemase [alpha proteobacterium HTCC2255]
 gi|114550220|gb|EAU53101.1| alanine racemase [alpha proteobacterium HTCC2255]
          Length = 351

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 124/363 (34%), Positives = 171/363 (47%), Gaps = 27/363 (7%)

Query: 9   LKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           LKID  A+ NNW S+    + N  TAAV+K +AYGL  + IA  L    V+ FFV   EE
Sbjct: 11  LKIDTNAIYNNWQSLDKKSAKNVETAAVIKADAYGLSTKNIASYLAFKNVKTFFVAIAEE 70

Query: 68  GVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G+  R      A IFV  G       II + NLIP+++S  Q   +           + +
Sbjct: 71  GIGARKAVGNDADIFVFSGQMENDAAIIKEYNLIPLLNSADQYHQFQINSPNQK---FGI 127

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+DTG NRLG+   E      N  N  L       SHLACAD+P+   N  QL  F   +
Sbjct: 128 QLDTGMNRLGMEGIEFSSLDENMSNACLIM-----SHLACADEPNHSQNLKQLRTF-HHL 181

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +    I  SL+++ GILLGP YHF L RPGI LYGG            V+     +I  R
Sbjct: 182 TDDLKIRKSLSATGGILLGPEYHFDLCRPGIGLYGGLPYDTA----LPVIKLSIPVIQSR 237

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YGGQ +   D+ +A  + GYADG    +                 +     
Sbjct: 238 TVFAGETVGYGGQWRAKTDTRVATISAGYADGLIRAIGNGQLLL----------YHGDVG 287

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
            P++G+++MD+   DIT          + +      +D +A A+ T  Y++L  +G RYA
Sbjct: 288 CPLIGRVSMDLITVDITQLEDTPR--SLDLINKIQTVDIIANAANTIGYEILTSLGARYA 345

Query: 367 KFY 369
           + Y
Sbjct: 346 REY 348


>gi|325479259|gb|EGC82355.1| alanine racemase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 373

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 82/356 (23%), Positives = 141/356 (39%), Gaps = 26/356 (7%)

Query: 21  HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARI 80
             + +++      AVVK NAYGLG   IA  + +  +  F V    E   LRL      I
Sbjct: 18  EKVKSMNNQTPICAVVKANAYGLGAVPIATYIEDH-ISYFAVARYSEAKALRLSGIIKPI 76

Query: 81  FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQ 140
            +L  +   +     + ++   I  +     +    +        L +DTG  RLG    
Sbjct: 77  LILGYVSVEEAIECAEYDIDICIFDMDY--TFEIDKALNKKLNGHLAIDTGHTRLGFRNY 134

Query: 141 EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK---GIEASLA 197
           E      +  N K  ++    +H A AD+  +  + +Q + F   IS+ +    IE    
Sbjct: 135 ETQKIL-SLKNLKNIRIRGAFTHYATADEKDTSFSKLQTKLFEETISNVRDELNIENIHI 193

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDK----INKSHPMQTVVTAEARIILIRKALAGEL 253
           ++S   +  +    + R GIS+YG           S  ++      +RI  ++    G  
Sbjct: 194 ANSAAGISFDVKSDMIRLGISMYGIYPSDYLKDTSSIDLEKTFRFMSRIAFVKDVKKGTP 253

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           +SYG      +D  IA   IGYADGY    S +           G+  + G    + G++
Sbjct: 254 ISYGRTFYTKKDMKIATVPIGYADGYFRAFSNI-----------GEVLVNGENARVCGRV 302

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            MD  M D+++    ++GD ++I+     +   A    T  Y+L+     R  + Y
Sbjct: 303 CMDQMMIDVSNI-KCKIGDEVEIY---YDIYKEANKIDTIAYELMTSFDMRLERVY 354


>gi|15606873|ref|NP_214253.1| alanine racemase [Aquifex aeolicus VF5]
 gi|3913028|sp|O67687|ALR_AQUAE RecName: Full=Alanine racemase
 gi|2984113|gb|AAC07650.1| alanine racemase [Aquifex aeolicus VF5]
          Length = 338

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 33/366 (9%)

Query: 6   FLR--LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFV 62
             R  L+I+   +++N   ++  SG  +  AV+K +AYG+G  ++A  L     V  F V
Sbjct: 1   MPRAILEINSERIRHNVKKLSEFSGK-KVIAVIKADAYGIGSIQMAKILEPIEEVDAFAV 59

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             VEEGV+LR    +  I +L G+   +  ++ +  L PV+S +  L             
Sbjct: 60  ACVEEGVELRKMGIKKEILILGGVLKDEVPLVEEYFLTPVVSDIEHLRAI-----GNRDI 114

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            + ++ DTG  RLG   +                  ++    + AD+     + +Q+++F
Sbjct: 115 KFHVKYDTGMGRLGFLNE---------VIHDPRVEGIMSHLSSPADE---EFSKLQIKKF 162

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             ++  Y  +E     SS  ++         R G+++YG     N    ++  +T +A++
Sbjct: 163 EEIVKKYTKVEKIHMESSAGVVYRVPFTTHIRVGLAMYGEKPLKNYPVDIKPALTLKAKL 222

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +++      VSY       + +   V A GYADG   TLS                  
Sbjct: 223 ISVKELPENYPVSYSRTYVTKKKTKTGVVAFGYADGLMKTLSNRS-----------YLLY 271

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           KG  +PI G ITMDMT+ D+  +   +VGD++ +   +    ++A  +GT  Y+L+  + 
Sbjct: 272 KGEKLPIFGNITMDMTIVDL-KNTDAKVGDWVYVVNEERTFTELAREAGTIPYELMCNLS 330

Query: 363 TRYAKF 368
            R  + 
Sbjct: 331 KRIKRV 336


>gi|218288214|ref|ZP_03492513.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241573|gb|EED08746.1| alanine racemase [Alicyclobacillus acidocaldarius LAA1]
          Length = 400

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 95/401 (23%), Positives = 164/401 (40%), Gaps = 61/401 (15%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             L   IDL  L +N   +   L         VK +AYG G   +   L   GV+   V 
Sbjct: 3   RPLFAVIDLGHLSHNIRYLQSRLRPGTSLMVAVKADAYGHGVRAVVDRLAREGVRQVAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S+EE +++R +     I VL  + P       +  +   ++ +   +   ++        
Sbjct: 63  SIEEALEIRAFDRDVNILVLGAVTPDACMKAAEAEVEIALTDL---SPIDEIPRLPKRLR 119

Query: 124 YALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L +DTG NRLG+    EA+        ++  +L    +HLA AD       + Q+ER 
Sbjct: 120 VHLPLDTGMNRLGVKRTDEAVALARAIAAREDLELVGAGTHLAAADAEDPAHAAGQMERL 179

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
           +  +     +  +       +S+ +L  P++H  + R GI+ YG +   +   +  ++ V
Sbjct: 180 KAFVRALEAAGLRPPRIHAGNSAALLRDPDWHLDMVRVGIAAYGYSPDPSVLPAPSLRPV 239

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A ++ + +A AGE V YG    +TR  +IA  A GYADGYP  LS           
Sbjct: 240 MSLYAGVLRVAQAEAGETVGYGATFVVTRPMVIATVAGGYADGYPRHLSNE--------- 290

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL------------ 343
             G+  ++G + P++G++ MD  M D+T    +  GD + +FG D               
Sbjct: 291 --GEVLVRGELRPVIGRVCMDQLMVDVTGL-DVATGDVVALFGYDPPALWRAGWWNRLRP 347

Query: 344 DD-------------------------VALASGTTNYDLLV 359
           +D                         +A  + T  Y++L 
Sbjct: 348 EDRIARVQETYRMASNSEERRVLSLHRLAERAQTIPYEILC 388


>gi|291456246|ref|ZP_06595636.1| alanine racemase [Bifidobacterium breve DSM 20213]
 gi|291381523|gb|EFE89041.1| alanine racemase [Bifidobacterium breve DSM 20213]
          Length = 452

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 159/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVNLKTMRDNMAHLVSVVGGPNSGTAVMGVVKADAYGHGLLPSALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFAAALAELVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+   +  +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIETFKDFTARMEKAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEQFVEPTADDWARAADTISYEVFTCLRNRIPRLY 431


>gi|332185497|ref|ZP_08387245.1| alanine racemase [Sphingomonas sp. S17]
 gi|332014475|gb|EGI56532.1| alanine racemase [Sphingomonas sp. S17]
          Length = 342

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 122/367 (33%), Positives = 183/367 (49%), Gaps = 26/367 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M     LRL+ID  AL++NW +++ LSG A   A VK N YGLG   +A AL  AG +DF
Sbjct: 1   MEIPAPLRLRIDRDALQSNWQALDRLSGTAACGAAVKANGYGLGATLVAKALAEAGCRDF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FV +  E + L          VL+G+     ++       PV+S+  Q+  +        
Sbjct: 61  FVANWAEALALAPLGLTVS--VLHGLRADDVEVARAGFARPVLSTPEQIARWRDSGGG-- 116

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                + VDTG NRLG+S++               Q+  ++SHLACAD+    +N+ Q  
Sbjct: 117 --LCDVMVDTGMNRLGVSVE-----AVTGGLLDGLQIETLLSHLACADEDV-PMNARQQA 168

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
            F  L         SLA+S+GI LG +Y F LTRPG++LYGG  + + +  ++ V   EA
Sbjct: 169 AFAGLKGQTGARRMSLANSAGIGLGADYRFDLTRPGLALYGGVPRPDMAQHLRQVAWPEA 228

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +I+  R   AGE V Y        D+ +A+  +GYADGY   LSGL           G  
Sbjct: 229 QILQRRHVPAGETVGYNATWTAPADTEVAILNLGYADGYRRALSGL-----------GAA 277

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G  +P+LG+++MD+   ++T    +  GD+      D  L   + ASG + Y+LL  
Sbjct: 278 VVDGVKLPVLGRVSMDLLAINVTARADLAEGDW---LSMDYDLAAASAASGVSQYELLTG 334

Query: 361 IGTRYAK 367
           +  R+A+
Sbjct: 335 LAQRFAR 341


>gi|120608956|ref|YP_968634.1| alanine racemase [Acidovorax citrulli AAC00-1]
 gi|166919543|sp|A1TIS2|ALR_ACIAC RecName: Full=Alanine racemase
 gi|120587420|gb|ABM30860.1| alanine racemase [Acidovorax citrulli AAC00-1]
          Length = 369

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 94/380 (24%), Positives = 149/380 (39%), Gaps = 35/380 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++  I   AL+ N     A + +AR  AVVK NAYG G E+    L   G   F +  
Sbjct: 3   RPIQATIHTAALQQNLARARAAAPDARVWAVVKANAYGHGIERAFEGLR--GADGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  I +L G+  P   ++    +L   +    Q+ + S   +    H 
Sbjct: 61  LGEAERVRQLGWRGPILLLEGVFEPRDLELCSRLSLWHAVHCDEQIDWLSAHKTHA-PHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG                        ++H + AD P     + Q++ F 
Sbjct: 120 VFLKMNSGMNRLGFPPARYRAAWARLNALPQVDEISFMTHFSDADGPRG--IAHQIDAFC 177

Query: 184 TLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQT----V 235
           T      G E ++++S+  L              R GI LYG      +           
Sbjct: 178 TATQDLPG-ERTVSNSAATLRHAGGDARVRGDWVRAGIVLYGSAADHPEHTAAHWGLAPT 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T  ARII  ++  AG+ V YG      R   I V A GYADGYP               
Sbjct: 237 MTLSARIIGTQQLQAGDTVGYGSSFTADRPMTIGVVACGYADGYPRHA-----------P 285

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSL----SIEVGDYIQIFGPD-----IKLDDV 346
            G    + G     +G+++MDM   D+T          VG    ++G       + +D+V
Sbjct: 286 TGTPVLVNGVRTRTVGRVSMDMITVDLTPLHEAGVEAGVGSEATLWGRASCGAVLCIDEV 345

Query: 347 ALASGTTNYDLLVRIGTRYA 366
           A A+GT  Y+L+  +  R  
Sbjct: 346 AQAAGTVGYELMCALAPRVP 365


>gi|116619014|ref|YP_819385.1| alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097861|gb|ABJ63012.1| Alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 370

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 147/375 (39%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              RL++  +A+++N  ++  +SG  +    VK NAYG G   +A A    G+    V  
Sbjct: 7   RPTRLEVSKSAVEHNITTVKNVSGADKVFLTVKSNAYGFGLIPMAQAAVAGGIYGLGVAV 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L        +++   +++  + S+  L      ++     P 
Sbjct: 67  LDEAIALRHERITAPILILGISQVKYVELMAVQHIMATVVSLDWLEKAEHQLTGEQRLPV 126

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSF--NKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            L +DTG  R+G   +E L         +    +   + +H A +D   +     QL R+
Sbjct: 127 TLGIDTGMGRIGFRDRETLSKAIQFVLDHADKFEYVGLSTHFAESDSSDTRYFQKQLTRW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
             L       +      S + +        ++ R G  LYG      +      ++ V+ 
Sbjct: 187 HQLTDDLPKPKYYHVANSGAAMYHAEEVPHEVVRVGTVLYGIEPSRGELADGRNLKPVMA 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +  +++  AGE +SY  +   T++  I    IGY DG+   L G            
Sbjct: 247 LRSEVNFVKRLPAGEGISYSHKYTTTQNEWIGTVPIGYGDGWLRKLMGF----------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            K  I G   PI+G++ MD  M  +        G  +   G D      ++DVA  +G  
Sbjct: 296 -KVIIDGQYAPIVGQVAMDQLMIRLPREYP--EGTTVTFIGQDGDLENTIEDVAQFAGLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            +++   +  R  + 
Sbjct: 353 PWEITTGLQDRIHRI 367


>gi|161779854|gb|ABX79415.1| VanTc4 [Enterococcus casseliflavus]
          Length = 700

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 165/382 (43%), Gaps = 38/382 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H     + +    AL +N   +  +  +  +  AVVK +AYG   + +A  L   GV  
Sbjct: 337 LHLQRAAK-EFSAPALLHNLQEIKRVIPSTTKVMAVVKADAYGCDAQLVARTLERVGVDF 395

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V ++EE ++LR    ++R+ +L      + K +   +LI  I S       +     G
Sbjct: 396 FAVATIEEAIELRRAGIKSRLLILGYTSAQRAKELNRYSLIQTIVSEAHGQALA---RTG 452

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NS 176
           +     L VDTG +RLG++    L+     +     +++ I SHL  +D   +       
Sbjct: 453 LPIECHLAVDTGMHRLGVAPD--LETVRRLYALPSLKITGIFSHLGSSDQLDTASILRTQ 510

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q+  F  L++             L SS GIL  P  H+   RPGI L G     N+   
Sbjct: 511 AQIICFDDLLAGLSARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTK 570

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q ++T +A ++  +   AGE + YG      R + I + +IGY DG P  LS   
Sbjct: 571 QKINVQPILTLKALLVDKKTVAAGEAIGYGLATVFDRPTTIGIVSIGYCDGVPRALSNQG 630

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV- 346
            + S           +G ++P +G I MDM + D+TD   + V  ++++        D  
Sbjct: 631 FQLS----------YQGVLLPQVGLICMDMLLIDLTDYPELAVESWLEVIS------DWT 674

Query: 347 --ALASGTTNYDLLVRIGTRYA 366
             A  + T   +L+ R+G+R  
Sbjct: 675 NTADQAQTIPNELISRLGSRVP 696


>gi|85059320|ref|YP_455022.1| alanine racemase [Sodalis glossinidius str. 'morsitans']
 gi|123519392|sp|Q2NTA8|ALR_SODGM RecName: Full=Alanine racemase
 gi|84779840|dbj|BAE74617.1| alanine racemase [Sodalis glossinidius str. 'morsitans']
          Length = 356

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 22/366 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +  K+D   L +N   +   +  A+  +VVK N YG G   +   L       F +  
Sbjct: 3   RPIVAKVDSAVLASNLSIVRRHAPQAQVWSVVKANGYGHGLNTVWQGLQQ--TDGFALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E V LR    +  I +L G   P    +I    L  V+ S  Q+    ++        
Sbjct: 61  LHEAVVLREKGWRGPILLLEGFFQPADLAVIDRYRLTTVVHSDWQIEALRRMTP-RAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG S +       +    K      ++SH A AD P       Q+    
Sbjct: 120 IYLKLNSGMNRLGFSERALPGAWQSLNALKHVATLTLMSHFAYADMPEG--VEGQMAVVA 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAE 239
                  G    LA+S+  L  P  H Q  RPGI LYG +   N        ++ V+T +
Sbjct: 178 RAGEGLTG-PRCLANSAATLWHPATHGQWVRPGIILYGASPSGNWQDIAASGLRPVMTLQ 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + +I ++   AG  + YGG+ +++    + V A GYADGYP                G  
Sbjct: 237 SELIAVQSVPAGGRIGYGGRHRVSETHRVGVVACGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     LG ++MDM M D+       +G  ++++G  +K+D+VA ++GT  Y+L+ 
Sbjct: 286 ILVDGVRTSTLGAVSMDMLMVDLQLCPKARIGSAVELWGDHVKIDEVAASAGTLGYELMS 345

Query: 360 RIGTRY 365
            +  R 
Sbjct: 346 ALAPRV 351


>gi|330822880|ref|YP_004386183.1| alanine racemase [Alicycliphilus denitrificans K601]
 gi|329308252|gb|AEB82667.1| Alanine racemase [Alicycliphilus denitrificans K601]
          Length = 364

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N       + +AR  AVVK NAYG G E++   L +       +  
Sbjct: 3   RPILATIHPAAVQHNLERARRAAPDARMWAVVKANAYGHGIERVFEGLRS--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  + +L G+  P   ++    +L   +    Q+ + +   +    H 
Sbjct: 61  MAEAERVRRLGWRGPVLLLEGVFEPRDLELCSRLSLWHAVHCDEQIDWLAAHKTQA-PHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG +                      ++H + AD P    + VQ   F 
Sbjct: 120 VFLKMNSGMNRLGFAPGRYRSAWARLNALPQVDEISFMTHFSDADGPRGIAHQVQA--FH 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINK----SHPMQTVVT 237
                  G      S++ +  G          R GI+LYG      +       ++  +T
Sbjct: 178 RATQDLPGERCIANSAAILRHGGEAQVRLDWVRAGIALYGSAPDHPERTAVDWGLEPAMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +RII +++  AG+ V YG +        I V A GYADGYP                G
Sbjct: 238 LASRIIGVQQLQAGDTVGYGSRFTAEGPLAIGVVACGYADGYPRHCD-----------TG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM   D+T      +G  + ++G       + +D+VA A GT
Sbjct: 287 TPVLVNGVRTRTIGRVSMDMIAVDLTPVPGAGMGAEVTLWGRASNGVVLPIDEVAEAGGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 347 VGYELMCALAPRVP 360


>gi|223984929|ref|ZP_03635032.1| hypothetical protein HOLDEFILI_02334 [Holdemania filiformis DSM
           12042]
 gi|223963098|gb|EEF67507.1| hypothetical protein HOLDEFILI_02334 [Holdemania filiformis DSM
           12042]
          Length = 607

 Score =  224 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 93/383 (24%), Positives = 157/383 (40%), Gaps = 30/383 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +   +   +++D  AL++N   +   ++      AV+K NAYG G E  A  L   GV+ 
Sbjct: 238 LEGRDRAWVELDGIALRHNLTVLRKAMTPYQEIMAVLKANAYGHGLEPTADFLSRQGVRH 297

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V +VEE   +R   P A I +L  + P +   +    L   ++S  Q          G
Sbjct: 298 FAVATVEEAKVIRAVNPTAEILILGYVPPQRAAEVSRLRLSLTLTSYDQACQLD---QTG 354

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNS 176
            +    L VDTG +RLG + ++         +    +++ + SHL  AD+  +       
Sbjct: 355 FAIDAHLPVDTGMHRLGEAAEDLDAIVRYY-SLSHLRITGLYSHLYEADNLDAEAVAHTQ 413

Query: 177 VQLERFRTLIS--HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKS 229
            Q++RF  +      +GI+     L  S G L  P     L R GI+L+G          
Sbjct: 414 AQIDRFFHVADALKERGIDPGRLHLQGSYGFLNYPELRCDLVRFGIALFGCVAPFRSRME 473

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V +   RI  +R    GE   Y        D+ +A+ +IGY+DG   + S     
Sbjct: 474 LDLRPVASVHTRIAALRSLRKGEGAGYNHAWTAPCDTTVAILSIGYSDGLFRSSS----- 528

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
                F G +  I G   P++G + MD  + D+       +G+ + + G      I   +
Sbjct: 529 -----FQGVEVLIHGQRRPLIGAMCMDQCLVDLGTLP-AAIGEEVVVIGIQGSESISALE 582

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
           VA  + T   + L  +  R  + 
Sbjct: 583 VAEKNETIVPETLSMLRGRMPRI 605


>gi|241896461|ref|ZP_04783757.1| alanine racemase [Weissella paramesenteroides ATCC 33313]
 gi|241870441|gb|EER74192.1| alanine racemase [Weissella paramesenteroides ATCC 33313]
          Length = 381

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 87/376 (23%), Positives = 138/376 (36%), Gaps = 26/376 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R+KI   A+ +N       SG       VK NAYG G   +A A   AGV    V  
Sbjct: 17  RPTRIKISQAAVTHNVAVTRQASGAKFMFLAVKANAYGFGLIPMAQAAIKAGVDGLAVAV 76

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHP 123
           ++E + LR       I +L    P   K+I D +LI  +S +  L    +       +  
Sbjct: 77  LDEALALRQAGITVPIIILGITLPQYAKLIADNDLIATVSDLDWLQAAQQNLAGSQSTLQ 136

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLER 181
             L VDTG  R+G   +E+L         +         ++H + +D  ++     QL  
Sbjct: 137 VNLGVDTGMGRIGFRNRESLSEAITYLASQPIFFKYQSIMTHFSESDSLATDYFQKQLSN 196

Query: 182 FRTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT---VV 236
           +  L              S + +           R G  +YG      +  P      V+
Sbjct: 197 WHRLTDGLPMPPMVHLANSGAAMYHADEIPTDYIRAGTVVYGIEPSRGEVLPDNYLKPVL 256

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E  +I +++  A   +SYG          +    IGYADG P  + G           
Sbjct: 257 TLETELIFVKQMPANVGISYGHTYYTHEGEWVGTVPIGYADGLPRPIQGF---------- 306

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGT 352
             +  + G   PI+G+I MD  M  + + L +  G  + I G     +  L+DVA   G 
Sbjct: 307 --EVLVNGQKAPIIGQIAMDQLMISLPEKLPV--GTVVTIIGKQGQYENTLEDVAQHVGL 362

Query: 353 TNYDLLVRIGTRYAKF 368
             + +   +  R  + 
Sbjct: 363 APWVVATGLQDRLMRV 378


>gi|319761022|ref|YP_004124959.1| alanine racemase [Alicycliphilus denitrificans BC]
 gi|317115583|gb|ADU98071.1| alanine racemase [Alicycliphilus denitrificans BC]
          Length = 364

 Score =  223 bits (569), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 84/374 (22%), Positives = 148/374 (39%), Gaps = 28/374 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N       + +AR  AVVK NAYG G E++   L +       +  
Sbjct: 3   RPILATIHPAAVQHNLERARRAAPDARMWAVVKANAYGHGIERVFEGLRS--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           + E  ++R    +  + +L G+  P   ++    +L   +    Q+ + +   +    H 
Sbjct: 61  MAEAERVRRLGWRGPVLLLEGVFEPRDLELCSRLSLWHAVHCDEQIDWLAAHKTQA-PHR 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG +                      ++H + AD P    + VQ   F 
Sbjct: 120 VFLKMNSGMNRLGFAPGRYRSAWARLNALPQVDEISFMTHFSDADGPRGIAHQVQA--FH 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINK----SHPMQTVVT 237
                  G      S++ +  G          R GI+LYG      +       ++  +T
Sbjct: 178 RATQDLPGERCIANSAAILRHGGEAQVRLDWVRAGIALYGSAPDHPERTAVDWGLEPAMT 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +RII +++  AG+ V YG +        I V A GYADGYP                G
Sbjct: 238 LASRIIGVQQLQAGDTVGYGSRFTAEGPLAIGVVACGYADGYPRHCD-----------TG 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGT 352
               + G     +G+++MDM   D+T      +G  + ++G       + +D+VA A GT
Sbjct: 287 TPVLVNGVRTRTIGRVSMDMIAVDLTPVPGAGMGAEVTLWGRAANGVVLPIDEVAEAGGT 346

Query: 353 TNYDLLVRIGTRYA 366
             Y+L+  +  R  
Sbjct: 347 VGYELMCALAPRVP 360


>gi|67479937|gb|AAY67970.1| serine racemase [Enterococcus gallinarum]
          Length = 698

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 103/376 (27%), Positives = 167/376 (44%), Gaps = 38/376 (10%)

Query: 10  KIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +   TAL +N   +  + S   +  AVVK +AYG G +++AP L  AG+  F V +++EG
Sbjct: 343 EFSKTALLHNLQEIQRIISPKTKVMAVVKADAYGCGAKEVAPVLEQAGIDFFAVATIDEG 402

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR    ++ I VL    P + K +   +L   I S       S+           L +
Sbjct: 403 IQLRKNAVKSPILVLGYTSPKRIKELRRYSLTQSIISEGHAVALSQRKVA---IDCHLAI 459

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLERFRTL 185
           DTG +RLG++    +D   + F+     +S + SHL  AD  +         Q+  F  +
Sbjct: 460 DTGMHRLGVTP--TIDSILSIFDLPFLTISGVYSHLGSADRLNPDSMIRTQKQIACFDQI 517

Query: 186 ISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----QTVV 236
           +      +       L SS GIL  P+ ++   RPGI L G     N+        Q ++
Sbjct: 518 LLELDQRQISYGITHLQSSYGILNYPDLNYDYVRPGILLTGSLSDTNEPTKQRVSLQPIL 577

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A++I  R    GE + YG      +++ + V +IGY DG P +LS  +   S     
Sbjct: 578 TLKAQLITKRVVAKGEAIGYGQTAVANQETTVGVVSIGYCDGLPRSLSNQEFCLS----- 632

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV---ALASGTT 353
                 +G  +P +G I MDM + D++   +I +   I+I        D    A    T 
Sbjct: 633 -----YRGQSLPQIGLICMDMLLIDLSHCPTIPIESEIEIL------TDWSDTAEQVQTI 681

Query: 354 NYDLLVRIGTRY-AKF 368
             +L+ RIG R  A+ 
Sbjct: 682 TNELICRIGPRVSARI 697


>gi|13488309|ref|NP_085891.1| alanine racemase [Mesorhizobium loti MAFF303099]
 gi|20137422|sp|Q981H7|ALR3_RHILO RecName: Full=Alanine racemase 3
 gi|14028426|dbj|BAB54978.1| alanine racemase [Mesorhizobium loti MAFF303099]
          Length = 388

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 18/364 (4%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL+A++ N+ +++AL     R AAVVK +AYGLG  K+A AL +AG    FV ++ E
Sbjct: 12  LEIDLSAIQANFQTISALVGPQVRVAAVVKSDAYGLGLVKVAGALIDAGCDLLFVGNLHE 71

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            + LR     A + V         +      LIPV+++  +      +        Y L 
Sbjct: 72  ALLLRSSHISAAVAVFCDEFARYGEHYRSNGLIPVVNNSVE---LDAICGAREPQAYFLN 128

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           V+TG +RLGL+  +          K     S+++SHLAC++     +N +Q  RFR    
Sbjct: 129 VETGLSRLGLAFDDVRRRYLGGIFK-RRPPSVVLSHLACSERAGDAMNLLQWNRFRATSD 187

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
             K    SLA+S+G+ LG  YHF + R G +LYG      + +P++ VV  +A+ +  R 
Sbjct: 188 LLKPTLLSLAASAGVWLGKRYHFDMVRVGSALYGLNSAGIRPNPLKPVVGVKAKTLDARN 247

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
               E V YG   +  R S +A+A IGY  G P   +   S               GY  
Sbjct: 248 VARSEAVGYGATFRTGRASRLAIAGIGYKHGLPWACANKIS-----------VRFAGYSA 296

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P++G+++M+    D+TD        G  +++   D  +DD+A ++G    ++L R+G   
Sbjct: 297 PLVGRVSMEYITIDVTDVPEALCGPGTNVELLSDDFTVDDLAASAGVHPQEVLTRLGVGC 356

Query: 366 AKFY 369
           A+ Y
Sbjct: 357 ARQY 360


>gi|290891219|ref|ZP_06554281.1| hypothetical protein AWRIB429_1671 [Oenococcus oeni AWRIB429]
 gi|290479183|gb|EFD87845.1| hypothetical protein AWRIB429_1671 [Oenococcus oeni AWRIB429]
          Length = 386

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 83/386 (21%), Positives = 152/386 (39%), Gaps = 36/386 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFV 62
           +    + +DL A  +N   +   +   +  AV+K + YGLG   +A A    A      V
Sbjct: 6   HRPTWVSVDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++++E ++LR       I+VL        K+  D +++    ++P L +   L     + 
Sbjct: 66  SNLDEALELRQADLTLPIWVLGAWDYSDLKLFIDHDIVI---TIPSLAWLQNLPDFEGTL 122

Query: 123 PYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACAD---DPSSHVNSVQ 178
             +L +DTG  R+G     E               L  + +H A AD   + S      Q
Sbjct: 123 KVSLAIDTGMTRIGFDKADEISAAKKIIDKNPQLDLFSVYTHFATADEAGEKSKAYFEEQ 182

Query: 179 LERFRTLI--SHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINK----- 228
           L R++ L     +     S+A+S+  +     P   F   RPG  + G      +     
Sbjct: 183 LRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAAIRPGQLISGVNVSNGELKMPP 242

Query: 229 SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           +  ++ + +  + I  +R     + +SYG  +++  D  +A    GY DG+   +     
Sbjct: 243 NLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQ---- 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLD 344
                        I G  + I+G+ITMD TM  +       +G  + +     G  I ++
Sbjct: 299 --------KSSVIINGKRMLIIGRITMDQTMVKLDRKYP--IGTRVTLIGKDGGEQITVE 348

Query: 345 DVALASGTTNYDLLVRIGTRYAKFYT 370
           +VA  S T   ++   +  R  + YT
Sbjct: 349 EVANYSHTIVDEIQTTLAPRIKRIYT 374


>gi|257869522|ref|ZP_05649175.1| serine/alanine racemase [Enterococcus gallinarum EG2]
 gi|20140922|sp|Q9X3P3|VANT_ENTGA RecName: Full=Serine/alanine racemase; AltName: Full=Vancomycin
           C-type resistance protein VanT
 gi|4545123|gb|AAD22403.1| serine racemase VanT [Enterococcus gallinarum]
 gi|257803686|gb|EEV32508.1| serine/alanine racemase [Enterococcus gallinarum EG2]
          Length = 698

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 103/376 (27%), Positives = 167/376 (44%), Gaps = 38/376 (10%)

Query: 10  KIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +   TAL +N   +  + S   +  AVVK +AYG G +++AP L  AG+  F V +++EG
Sbjct: 343 EFSKTALLHNLQEIQRIISPKTKVMAVVKADAYGCGAKEVAPVLEQAGIDFFAVATIDEG 402

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR    ++ I VL    P + K +   +L   I S       S+           L +
Sbjct: 403 IRLRKNAVKSPILVLGYTSPKRIKELRRYSLTQSIISEGHAVALSQRKVA---IDCHLAI 459

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLERFRTL 185
           DTG +RLG++    +D   + F+     +S + SHL  AD  +         Q+  F  +
Sbjct: 460 DTGMHRLGVTP--TIDSILSIFDLPFLTISGVYSHLGSADRLNPDSMIRTQKQIACFDQI 517

Query: 186 ISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM----QTVV 236
           +      +       L SS GIL  P+ ++   RPGI L G     N+        Q ++
Sbjct: 518 LLELDQRQISYGITHLQSSYGILNYPDLNYDYVRPGILLTGSLSDTNEPTKQRVSLQPIL 577

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T +A++I  R    GE + YG      +++ + V +IGY DG P +LS  +   S     
Sbjct: 578 TLKAQLITKRVVAKGEAIGYGQTAVANQETTVGVVSIGYCDGLPRSLSNQEFCLS----- 632

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV---ALASGTT 353
                 +G  +P +G I MDM + D++   +I +   I+I        D    A    T 
Sbjct: 633 -----YRGQSLPQIGLICMDMLLIDLSHCPTIPIESEIEIL------TDWSDTAEQVQTI 681

Query: 354 NYDLLVRIGTRY-AKF 368
             +L+ RIG R  A+ 
Sbjct: 682 TNELICRIGPRVSARI 697


>gi|227431451|ref|ZP_03913500.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227352817|gb|EEJ42994.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 370

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 80/375 (21%), Positives = 148/375 (39%), Gaps = 25/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              RL++  +A+++N  ++  +SG  +    VK NAYG G   +A A    G+    V  
Sbjct: 7   RPTRLEVSKSAVEHNITTVKNVSGADKVFLTVKSNAYGFGLIPMAQAAVAGGIYGLGVAV 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E + LR     A I +L        +++   +++  + S+  L      ++     P 
Sbjct: 67  LDEAIALRHERITAPILILGISQVKYVELMAVQHIMATVVSLDWLEKAEHQLTGEQRLPV 126

Query: 125 ALQVDTGFNRLGLSLQE--ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            L +DTG  R+G   +E  A        +    +   + +H A +D   +    +QL R+
Sbjct: 127 TLGIDTGMGRIGFRDRETLAKAIQFVLDHADKFEYVGLSTHFAESDSSDTRYFQMQLTRW 186

Query: 183 RTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVT 237
             L       +      S + +        ++ R G  LYG      +      ++ V+ 
Sbjct: 187 HQLTDDLPKPKYYHVANSGAAMYHAEEIPHEVVRVGTVLYGIEPSRGELADGRNLKPVMA 246

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +  +++  AGE +SY  Q   T++  I    IGY DG+   L G            
Sbjct: 247 LRSEVNFVKRLPAGESISYSHQYTTTQNEWIGTVPIGYGDGWLRKLMGF----------- 295

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            K  I G   PI+G++ MD  M  +        G  +   G D      ++DVA  +G  
Sbjct: 296 -KVIIDGQYAPIVGQVAMDQLMIRLPREYP--EGTTVTFIGQDGDLENTIEDVAQFAGLA 352

Query: 354 NYDLLVRIGTRYAKF 368
            +++   +  R  + 
Sbjct: 353 PWEITTGLQDRIHRI 367


>gi|229818028|ref|ZP_04448310.1| hypothetical protein BIFANG_03316 [Bifidobacterium angulatum DSM
           20098]
 gi|229784632|gb|EEP20746.1| hypothetical protein BIFANG_03316 [Bifidobacterium angulatum DSM
           20098]
          Length = 452

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 160/408 (39%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL A+++N   + A  G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKAMRDNMRHLVATVGGPQSGTAVMGVVKADAYGHGLLPSALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I +   + V S        
Sbjct: 84  TWLGTAQSHEALLLRQLGIGPDRCHILTWVYNGTAVPFDELIDNDIDVSVGSLAGIDAIA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G +    ++VD+GF R G + +    AL        + + ++    SHLA AD 
Sbjct: 144 AAARKLGKAARVHVKVDSGFGRNGFTPEGFDAALAKLVQLAQEGVIEVIGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+  F       K          LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVESTERQIANFNAFTDRMKQAGIAPSIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQTV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG      +++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPNTYKLKPAMRLQAQLGTVKDVEAGHGISYGRTYLTPQNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   +      ++  + G++ MD  + D+  S   L I
Sbjct: 324 DGIHRSASGFDMEGAKHVDKPGGPVRVMTKQGPHIYHVSGRVCMDQFILDLHGSAAELGI 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 AEGDTVELFGPGRGEEYGEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|257452886|ref|ZP_05618185.1| alanine racemase, biosynthetic [Fusobacterium sp. 3_1_5R]
 gi|257466749|ref|ZP_05631060.1| alanine racemase, biosynthetic [Fusobacterium gonidiaformans ATCC
           25563]
 gi|315917898|ref|ZP_07914138.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059428|ref|ZP_07923913.1| alanine racemase [Fusobacterium sp. 3_1_5R]
 gi|313685104|gb|EFS21939.1| alanine racemase [Fusobacterium sp. 3_1_5R]
 gi|313691773|gb|EFS28608.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 354

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 92/374 (24%), Positives = 147/374 (39%), Gaps = 32/374 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   L++N   +   +       V+K NAYGLG   +A  L   G+  F V S+
Sbjct: 2   RAWVEIDTENLRHNIREIQKRAEGFGVWGVIKANAYGLGVLPVAKILAEEGIHYFAVASL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE  ++R       I +L  +   +     +   +    +V        +          
Sbjct: 62  EEAKEVRNANITGEILILGSLFHDEI---LEAESLDFHINVSCREELEWIAKNAPKTKIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERF 182
           L++DTG  RLG S QE ++    +    L  ++ + SH + AD  S         Q+ERF
Sbjct: 119 LKIDTGMTRLGFSYQEGMEVIEFAKKLSL-NITGVFSHFSDADGNSQEAKEYTQKQIERF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
               +        + +S  ++   +     + R GI LYG           + VVT + +
Sbjct: 178 LPYATREDIPYRHIFNSGALIQYTDQKIGNMVRAGICLYGILGSTPIPS-FKNVVTLKTK 236

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++  +       VSYG   KL +        IGYADG    L+            GGK  
Sbjct: 237 VLFKKTVTEETYVSYGRLCKLEKGETYVTLPIGYADGVKKYLAN-----------GGKVE 285

Query: 302 IKGYMVPILGKITMDMTMFDITD--SLSIEVGDYIQIFGPDI----KLDDVALASGTTNY 355
           I G   PI+G I MDM M  I +     IE+G  + +F  DI     + +      T  +
Sbjct: 286 ILGEACPIIGAICMDMMMVKIPENLVNKIEIGTEVSVFNNDIIRRNNISE------TCTW 339

Query: 356 DLLVRIGTRYAKFY 369
           D+   +G R  + Y
Sbjct: 340 DMFTGLGRRVQRIY 353


>gi|325571360|ref|ZP_08146860.1| serine/alanine racemase [Enterococcus casseliflavus ATCC 12755]
 gi|325155836|gb|EGC68032.1| serine/alanine racemase [Enterococcus casseliflavus ATCC 12755]
          Length = 700

 Score =  223 bits (567), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 98/382 (25%), Positives = 163/382 (42%), Gaps = 38/382 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H     + +    AL +N   +  L     +  AVVK +AYG   + +A  L   GV  
Sbjct: 337 LHLQRAAK-EFSAPALLHNLQEIKRLIPAKTKVMAVVKADAYGCDAQLVARTLERVGVDF 395

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V ++EE ++LR    ++R+ +L      + K +   +LI  I S       +     G
Sbjct: 396 FAVATIEEAIELRRAGIKSRLLILGYTSAQRAKELNRYSLIQTIVSEAHGQALA---RTG 452

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NS 176
           +     L VDTG +RLG++    L+     +     +++ I SHL  +D   +       
Sbjct: 453 LQIECHLAVDTGMHRLGVAPD--LETVRRLYALPSLKITGIFSHLGSSDQLDTASILRTQ 510

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q+  F  L++             L SS GIL  P   +   RPGI L G     N+   
Sbjct: 511 AQIICFDDLLAGLSARNIAYGLTHLQSSYGILNYPEKQYDYVRPGILLTGSLSVPNEPTK 570

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q ++T +A ++  +   AGE + YG      R + I + +IGY DG P  LS   
Sbjct: 571 QKINVQPILTLKALLVDKKTVAAGEAIGYGLATVFDRPTTIGIVSIGYCDGVPRALSNQG 630

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV- 346
            + S           +G ++P +G I MDM + D+TD   + V  +++       + D  
Sbjct: 631 FQLS----------YQGVLLPQVGLICMDMLLIDLTDYPELAVESWLE------AISDWT 674

Query: 347 --ALASGTTNYDLLVRIGTRYA 366
             A  + T   +L+ R+G+R  
Sbjct: 675 NTADQAQTIPNELISRLGSRVP 696


>gi|258651430|ref|YP_003200586.1| alanine racemase [Nakamurella multipartita DSM 44233]
 gi|258554655|gb|ACV77597.1| alanine racemase [Nakamurella multipartita DSM 44233]
          Length = 394

 Score =  222 bits (566), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 93/380 (24%), Positives = 148/380 (38%), Gaps = 30/380 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNAR----TAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           E +   +DL A+  N  ++ AL   +       AVVK + YG G    A A    G    
Sbjct: 22  ERVAAVVDLAAITANVRTLLALMRGSNPAGSVMAVVKADGYGHGAVAAAQAALAGGATWL 81

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V +  E ++LR       +         +        +   ++S  QL          V
Sbjct: 82  GVATPTEALQLRAAGVDVPVLAWLWPPGERVAPALAAGVQLAVASRAQLDRVLDQAVGAV 141

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSV 177
                ++VDTG  R G+   E           +      +   +SHLA AD P       
Sbjct: 142 P-DIHVKVDTGLGRGGVGPAEIGAVLDAVAAAQRAGRVRVAGLMSHLASADVPDDPSVPE 200

Query: 178 QLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           Q   F  +++             LA+++G++  P   F L R GI  YG    +    P+
Sbjct: 201 QTATFHRILAAAADRGIDPPLRHLANTAGLIDHPATRFDLVRVGIGGYGLNP-VATPVPL 259

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              +T  A + L ++  AG  VSYG   +  R++ +A+  +GYADG P   S        
Sbjct: 260 TPAMTLRATVALTKRVPAGHGVSYGLTYRTDRETTLALIPLGYADGLPRAASNR------ 313

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G+ ++ G    I G++ MD  + D  D   +  GD   +FGP    +    D A 
Sbjct: 314 -----GEIWLAGARRRIAGRVAMDQVVVDCGDDP-VAAGDPAIVFGPGEQGEPTARDWAD 367

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
             GT +Y+++ RIG R  + 
Sbjct: 368 YCGTIDYEIVTRIGPRVPRR 387


>gi|322437297|ref|YP_004219509.1| alanine racemase [Acidobacterium sp. MP5ACTX9]
 gi|321165024|gb|ADW70729.1| alanine racemase [Acidobacterium sp. MP5ACTX9]
          Length = 375

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 98/386 (25%), Positives = 162/386 (41%), Gaps = 46/386 (11%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             +ID  AL  N+ ++  ++G A   AV+K  AYG G E+ AP L  AG +   VT   E
Sbjct: 4   WTEIDAAALTANYKAIQRVAG-AEVLAVIKARAYGHGAERCAPILVRAGARWLGVTCASE 62

Query: 68  GVKLRLY----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           G ++R        +A I V+ G  P     I   +LIPVI +   +   +     G+   
Sbjct: 63  GQQVRAALDHAGLEADILVMSGSLPKDVPAIVSAHLIPVIWTTDHIDLLA-----GIGCR 117

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++VDTG  R G+   + L       +    +L  + +H   ++  +S++   Q   F 
Sbjct: 118 VHVEVDTGMGRQGVRPGQDLATLLARISAAGLRLDGLFTHFCSSEVANSNLTLRQRALFE 177

Query: 184 TLISHYKGI---EASLASSSGILLGPNYH-----------------FQLTRPGISLYGGT 223
             +          A L +++   +                        + R G++LYG  
Sbjct: 178 AAVQQTVTAGLTPAWLHAANSSAVDNETPEPSSGDWLTTLAAAAGSQTMVRTGLALYGYC 237

Query: 224 DKIN------KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
             I        S  +Q V+T +ARI+ +R    G+ V Y           +A+  +GYAD
Sbjct: 238 LPIEGGALHHLSPALQPVLTWKARILAVRDLAPGDTVGYNATFIAGPAMKVALLPVGYAD 297

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           G    LS             G   ++G+  PILG+I+M++T+ D+T   +   GD   + 
Sbjct: 298 GLRRELS----------HPHGWVMVQGHPAPILGRISMNLTVVDVTAIPAASAGDEATLL 347

Query: 338 GPDIKLDDVALASGTTNYDLLVRIGT 363
           GP I  +D A  + T +Y++L  I  
Sbjct: 348 GPGITAEDHARLARTISYEILCGIHP 373


>gi|213585856|ref|ZP_03367682.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
          Length = 316

 Score =  222 bits (566), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 91/328 (27%), Positives = 144/328 (43%), Gaps = 19/328 (5%)

Query: 47  KIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV 106
           + A  L +     F V  +EE ++LR       I +L G     +        +      
Sbjct: 1   ETARTLPD--ADAFGVARLEEALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHN 58

Query: 107 PQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLA 165
            +     + +         +++DTG +RLG+  +EA  F    +  K + Q   I+SH A
Sbjct: 59  QEQLAALEAVELAEPVTVWMKLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFA 118

Query: 166 CADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD- 224
            AD+P       QL+ F        G + S+A+S GILL P  HF   RPGI LYG +  
Sbjct: 119 RADEPECGATEHQLDIFNAFCQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPL 177

Query: 225 ---KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
                      Q V++  + +I +R   AGE V YGG     RD+ + V A+GY DGYP 
Sbjct: 178 EHKPWGPDFGFQPVMSLTSSLIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPR 237

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI 341
                          G    + G  VPI+G++ MDM   D+  +     GD + ++G  +
Sbjct: 238 AA-----------PSGTPVLVNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGL 286

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++ +A  +  + Y+L+ R+ +R A  Y
Sbjct: 287 PVERIAEMTKVSAYELITRLTSRVAMKY 314


>gi|163781726|ref|ZP_02176726.1| alanine racemase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882946|gb|EDP76450.1| alanine racemase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 348

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 95/360 (26%), Positives = 161/360 (44%), Gaps = 31/360 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
           L+I  +A++ N   +    G  +  AV+K +AYG+G + +AP L     V+ F V  VEE
Sbjct: 16  LRIKRSAVEENVRELFRF-GGKKLIAVIKSDAYGIGVKYVAPILRELPEVESFAVACVEE 74

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           GV LR    +  + +L GI P + + + +  L PV+S +  L              + ++
Sbjct: 75  GVLLREMGIKREVLILGGILPEELEAVKEYGLTPVVSDIEHLKII-----GNEDIKFHVK 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            DTG  RLG   +   D         L            AD+     +  Q+ERF  ++ 
Sbjct: 130 YDTGMGRLGFVDEFVDDPRVVGIMSHLSTP---------ADE---EFSRKQIERFEAIVR 177

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
            Y         SS  ++    +    R G+++YG          ++  V+  AR++ ++ 
Sbjct: 178 RYSRKIKVHLESSAGVIYRVPYTTHIRVGLAIYGEKPLKEYPLRLRPAVSIRARVLSLKT 237

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AG  +SYG      R+  I V A GYADG   +LS             G    +G  +
Sbjct: 238 LPAGHPISYGRTFVTEREMRIGVIAFGYADGLMKSLSNR-----------GYLLYEGNKL 286

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI+G ITMDMT+ D+  + ++ VGD++ +   +    ++A  +GT  Y+L+  + +R  +
Sbjct: 287 PIVGNITMDMTIVDVG-TANVRVGDWVTVVSEERTFGELAREAGTIPYELMCNVSSRVKR 345


>gi|258510371|ref|YP_003183805.1| alanine racemase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477097|gb|ACV57416.1| alanine racemase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 400

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 94/401 (23%), Positives = 159/401 (39%), Gaps = 61/401 (15%)

Query: 5   EFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             L   IDL  L +N   +   L   A     VK +AYG G   +   L   GV    V 
Sbjct: 3   RPLFAVIDLAHLSHNIRYLKSRLRPGASLMVAVKADAYGHGVRAVVGRLVREGVHHVAVA 62

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S+EE +++R +     I VL  + P       +  +   ++ +   +   ++        
Sbjct: 63  SLEEALEIRAFHRGVNILVLGAVTPDACMKAAEAEVEIALTDL---SPIDEIPRLPKRLR 119

Query: 124 YALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L +DTG NRLG+    EA+        ++  +L    +HLA AD       + Q+ER 
Sbjct: 120 VHLPLDTGMNRLGVKRTDEAVALARAIAKREDLELVGAGTHLAAADAEDPAHAAGQMERL 179

Query: 183 RTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTV 235
              +     +  +       +S+ +L  P +H  + R GI+ YG +   +   +  ++ V
Sbjct: 180 GAFVRALEQAGLRPPRIHAGNSAALLRNPAWHLDMVRVGIAAYGYSPDPSVLPAPSLRPV 239

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A ++ + +A  GE V YG    +TR   IA  A GYADGYP  LS           
Sbjct: 240 MSLYAGVLRVAQAQPGETVGYGATFTVTRPMTIATVAGGYADGYPRHLSNE--------- 290

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL------------ 343
             G+  ++G   P++G++ MD  M D+T    +  GD + +FG D               
Sbjct: 291 --GEVLVRGEFRPVIGRVCMDQLMVDVTGL-DVATGDVVALFGYDAPALWRAGWWSRLRP 347

Query: 344 DD-------------------------VALASGTTNYDLLV 359
           ++                         +A  + T  Y++L 
Sbjct: 348 EERVARVQETYRMASNLGERRVLSLHRLAERAQTIPYEILC 388


>gi|291517241|emb|CBK70857.1| alanine racemase [Bifidobacterium longum subsp. longum F8]
          Length = 452

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|317482523|ref|ZP_07941538.1| alanine racemase domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
 gi|316915945|gb|EFV37352.1| alanine racemase domain-containing protein [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 452

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|13475189|ref|NP_106753.1| alanine racemase [Mesorhizobium loti MAFF303099]
 gi|20137424|sp|Q98A05|ALR1_RHILO RecName: Full=Alanine racemase, biosynthetic
 gi|14025940|dbj|BAB52539.1| alanine racemase [Mesorhizobium loti MAFF303099]
          Length = 397

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 111/364 (30%), Positives = 183/364 (50%), Gaps = 18/364 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L+IDL A++ N+  ++ L G+  + AAVVK +AYGLG   IA  L +AG    FV +++E
Sbjct: 13  LEIDLAAIRANFQKISTLVGDKVKVAAVVKSDAYGLGLVDIARTLIDAGCDLLFVANLDE 72

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            + LR    +  I V                LIPV+++         + + G    Y L 
Sbjct: 73  ALLLRSSFSRVAIAVFRDEFDRFGTWYRSHGLIPVVNN---CKELHAVGTAGEPQSYFLN 129

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           V+TGF+R GLS+ +     +     +  + S+++SHLAC +  S  +N +Q +RFRT+  
Sbjct: 130 VETGFSRFGLSVGDIQRE-YLLRTFERYRPSIVLSHLACGECISDPMNQLQRDRFRTVYD 188

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
             K    SL++S+G+ LG +YHF + R G +LYG  +   +++P++ VV   ARI+ +R 
Sbjct: 189 LLKPTRGSLSASAGVWLGKSYHFDMVRVGSALYGIHNAGVQTNPLKPVVKLRARILDVRS 248

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AGE V YG   +  R S +A+  IGY  G P + +                       
Sbjct: 249 VPAGEAVGYGATFRTDRASRVAIVGIGYKHGLPWSCANKIFVRLAEYS-----------A 297

Query: 308 PILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRY 365
           P +G+I+M+  + DITD  +     G + ++   D  ++D+  A+G +  + L R+G   
Sbjct: 298 PSIGRISMEYMIIDITDVPARRCSPGTFAELLSEDFTVNDLGAAAGVSPQEALTRLGAGC 357

Query: 366 AKFY 369
            + Y
Sbjct: 358 TRKY 361


>gi|23465715|ref|NP_696318.1| alanine racemase [Bifidobacterium longum NCC2705]
 gi|23326396|gb|AAN24954.1| alanine racemase [Bifidobacterium longum NCC2705]
          Length = 452

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|20140680|sp|Q93A44|VANTE_ENTFA RecName: Full=Amino-acid racemase; AltName: Full=Vancomycin E-type
           resistance protein VanT
 gi|16612081|gb|AAL27444.1|AF430807_9 VanTE [Enterococcus faecalis]
          Length = 702

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 150/367 (40%), Gaps = 27/367 (7%)

Query: 10  KIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +I  +A+ +N + +  +   N     VVK NAYG G  ++A  L   G+  F V ++EE 
Sbjct: 347 EISASAIHHNINEIRKIIPKNTNIMGVVKANAYGCGMVEVAYELEKIGISFFCVATIEEA 406

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           + LR    Q  I +L   HP +   I   NLI  I S       +      +     LQV
Sbjct: 407 IALRKSGNQGDILILGYTHPNRINDIKKYNLIQSIVSEEHGKVLN---LKKIPIRCHLQV 463

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERFRTLIS 187
           DTG +RLG++    +      F+    +        + + +  S    + Q+  F  ++S
Sbjct: 464 DTGMHRLGVTPNVTIIQQMYLFSNLKIEGIYSHLGSSDSLEQESIARTNTQIFLFNNILS 523

Query: 188 --HYKGI---EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
                GI      + SS GIL  P   F   R GI  YG     N    +   +    ++
Sbjct: 524 DLEQMGISYGYTHIQSSYGILNYPELSFDFVRIGILCYGFLSDYNSPTKIPIDLQPIVKV 583

Query: 243 I----LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
                  R   AGE V YG   K+ + + I V +IGYADG P  LS              
Sbjct: 584 KASLITERIVEAGEYVGYGLGAKVEKRTRIGVVSIGYADGIPRALSNAKLTLE------- 636

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
               KG  +  +G I MDM + D+++   I + D + +      +  +A    T   +LL
Sbjct: 637 ---FKGQSIKQIGNICMDMMLVDLSEVEDISLNDELIVL---PNISKIADEEQTITNELL 690

Query: 359 VRIGTRY 365
            R+G+R 
Sbjct: 691 SRLGSRL 697


>gi|322688667|ref|YP_004208401.1| alanine racemase [Bifidobacterium longum subsp. infantis 157F]
 gi|320460003|dbj|BAJ70623.1| alanine racemase [Bifidobacterium longum subsp. infantis 157F]
          Length = 452

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVNLKTMRDNMAHLVSVVGGPNSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|322690655|ref|YP_004220225.1| alanine racemase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320455511|dbj|BAJ66133.1| alanine racemase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 452

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 157/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL          +  +    SHLA AD 
Sbjct: 144 AAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKGGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|188996146|ref|YP_001930397.1| alanine racemase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931213|gb|ACD65843.1| alanine racemase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 324

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 27/340 (7%)

Query: 35  VVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKI 93
           +VK +AYG     ++  L     ++ F V +  EG +LR       I +L G+   + +I
Sbjct: 1   MVKADAYGHNAVLVSKYLQELDFIESFCVATPLEGKELRENGIFKNILILGGVLKEEIEI 60

Query: 94  IFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK 153
           +   NLIPVIS   QL           +    L+ DTG  RLG  L+            K
Sbjct: 61  LNQYNLIPVISDFNQLEI----ARKLKNRKIHLKFDTGMRRLGFYLENVDKIKPL---LK 113

Query: 154 LGQLSLIISHLACADDPSSHVNSVQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQ 211
             ++  +++HL+ AD         Q++ F+ +++    K     + +S+G++   ++   
Sbjct: 114 EFEIEGVLTHLSSADTDR-EYTINQIKEFKEILNLLDVKPKYIHVQNSAGVVYECDF-CN 171

Query: 212 LTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
           + R G+++YG     +    ++ V++ +++II I+   +G+ VSY G     +   +A+ 
Sbjct: 172 VIRVGLAMYGEKPFESYPIELKQVMSVKSKIISIKDVKSGDRVSYNGSFVAKKPMKVAIV 231

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG 331
             GYADG P +LS                 + G   PILGKITMDMT+ D+++  +I +G
Sbjct: 232 PFGYADGLPRSLSNRWFF-----------LVNGKEAPILGKITMDMTIVDVSEIENINIG 280

Query: 332 DYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
           + + I G      I   D+A   GT +Y+++  I  R  +
Sbjct: 281 NEVVIVGESGNKRITFGDIANIVGTISYEIMCGISKRVVR 320


>gi|227546323|ref|ZP_03976372.1| alanine racemase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|227213304|gb|EEI81176.1| alanine racemase [Bifidobacterium longum subsp. infantis ATCC
           55813]
          Length = 452

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVNLKTMRDNMAHLISVVGGPNSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|148273758|ref|YP_001223319.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831688|emb|CAN02657.1| putative alanine racemase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 385

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 79/378 (20%), Positives = 142/378 (37%), Gaps = 28/378 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +ID  A+  N  ++ A +G     AVVK + YG G    A A    G     V  V E 
Sbjct: 17  ARIDTGAISANVRALRAATGAPLVMAVVKADGYGHGAVASARAALAGGADRLGVVDVREA 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
           + LR     A +               + ++   ++S+ Q           G +    L+
Sbjct: 77  LALRAAGIDAPVLTWMHAPGADFATAIEADVDLGLNSLRQVREVAEAARRVGRTAEVHLK 136

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG  R G++  E                  +    +   +     +  Q+  F   + 
Sbjct: 137 VDTGLGRNGVTPAEWPAVVAEVQALVAEGRIHLGGVFSHLANAGREEDRAQVRAFHQSVD 196

Query: 188 --HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
                G+E     LA+++G L  P     + R GI +YG +      +    +   +T  
Sbjct: 197 VVRAAGLEPGIRHLAATAGALRVPEARLDMVRLGIGIYGISPLDGVTSADLGLVPAMTLV 256

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             ++ +++  A   VSYG   + +  + +A+ ++G+ADG P   S               
Sbjct: 257 GSVVAVKRVPADTGVSYGYTYRTSSATTLALVSLGFADGVPRLASNR-----------AP 305

Query: 300 GFIKGYMVPILGKITMDMT----MFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
             I G    + G+I MD         + D + + VGD   +FG        +++ A A+G
Sbjct: 306 VAIHGARFRVSGRIAMDQFVVDVGDGVVDGIPVAVGDDAVLFGDPATGAPSVEEWAEATG 365

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ R+  R  + +
Sbjct: 366 TIGYEIVARVAGRVTRRF 383


>gi|312133175|ref|YP_004000514.1| alr [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772373|gb|ADQ01861.1| Alr [Bifidobacterium longum subsp. longum BBMN68]
          Length = 450

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 22  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 81

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 82  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 141

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 142 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 201

Query: 170 P----SSHVNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 202 PDVSEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 261

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 262 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 321

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 322 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKIYRVCGRVCMDQFIVDLHGSAAELGV 381

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 382 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 429


>gi|239622329|ref|ZP_04665360.1| alanine racemase [Bifidobacterium longum subsp. infantis CCUG
           52486]
 gi|239514326|gb|EEQ54193.1| alanine racemase [Bifidobacterium longum subsp. infantis CCUG
           52486]
          Length = 452

 Score =  220 bits (560), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 P----SSHVNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVSEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKIYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|254492138|ref|ZP_05105313.1| alanine racemase [Methylophaga thiooxidans DMS010]
 gi|224462690|gb|EEF78964.1| alanine racemase [Methylophaga thiooxydans DMS010]
          Length = 334

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 20/339 (5%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            +V+K +AYG G    A AL  +    F V  ++EGV LR    +  I +L G++  Q+ 
Sbjct: 1   MSVIKADAYGHGAITAAEALKES--DAFAVARLKEGVFLRQKGVEHPIVLLEGVNTEQDF 58

Query: 93  IIF-DTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALD-FTHNSF 150
           I   +  L PVI    Q+     L          L VD+G +RLG+  ++     T  + 
Sbjct: 59  ITASEYQLSPVIHLHSQIQLLQTLTLPKPLAFNWLMVDSGMHRLGIRPEQVEMALTLLAE 118

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHF 210
           +  +     ++SH A +D      N  QL      + H   +   LA+S+ ++     H 
Sbjct: 119 SSNISGEVGLMSHFANSDLDGDPRNQKQLAHMLA-LKHKTSLPLCLANSAAVICLAESHQ 177

Query: 211 QLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSL 267
           Q  RPG+ LYG +   +KS     ++ V+T + ++I +     G+ V YGG+      + 
Sbjct: 178 QWVRPGLMLYGVSPFSDKSGTELGLKPVMTLKTQLIAVYDLEVGDQVGYGGEWTAEVPTR 237

Query: 268 IAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS 327
           I VA+IGY DGY   LS              +  I+G   P++G+++MD    ++     
Sbjct: 238 IGVASIGYGDGYSRHLSN-----------KAEVIIRGIKAPVIGRVSMDTICINLNHVEQ 286

Query: 328 IEVGDYIQIFG-PDIKLDDVALASGTTNYDLLVRIGTRY 365
            E GD + ++G  ++ ++ +A  + T  Y+L+  +  R 
Sbjct: 287 AETGDDVIVWGTANLAVEQLATLAETIPYELVTVLCQRV 325


>gi|332295096|ref|YP_004437019.1| Alanine racemase [Thermodesulfobium narugense DSM 14796]
 gi|332178199|gb|AEE13888.1| Alanine racemase [Thermodesulfobium narugense DSM 14796]
          Length = 352

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 96/365 (26%), Positives = 158/365 (43%), Gaps = 18/365 (4%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L+IDL A+ +N+  +      +    V+K NAYG+G   +A AL +       +  +E
Sbjct: 3   PWLEIDLDAILSNYKIIKEYV-KSDLIPVIKSNAYGMGLIPVANALKDV-ANLIAIGDIE 60

Query: 67  EGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           E   LR    +  + ++  I    + ++  + N+   I S    +F S +    G +   
Sbjct: 61  EAQTLRRSGFEGNLLLIVPIFSREEAELCVEYNVFTAIDSFDMASFLSDIAKKSGKTVGV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VD G +R G+  +E  +F          QL  I SH        + +   QL  F  
Sbjct: 121 HVKVDIGMHRFGVKPEELDNFIKQISYLPNIQLMGIFSHFPLG---LNLITEEQLILFDR 177

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +   YK +   L +S   +        + R G+ +YG      KS  ++ VV  +A I+ 
Sbjct: 178 ISEKYKNLIVHLPNSQNTVENFESLKFIPRCGLLIYGAMPSDVKSFVLKNVVKLKANIVK 237

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           I    AG+  SYG      +DS IAV +IGYADG    LS   S             +KG
Sbjct: 238 IHDISAGQSWSYGYSYTAHKDSKIAVISIGYADGLKRALSNKWSAK-----------VKG 286

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
            + P+ G I M+ +  DIT   ++ VGD   +   D+K++D+A    T  +++LV     
Sbjct: 287 SICPLRGTINMNFSFVDITGVDNVRVGDEAILLDEDLKIEDMAKTIDTVPHEILVSFRES 346

Query: 365 YAKFY 369
             + Y
Sbjct: 347 MKRIY 351


>gi|320459028|dbj|BAJ69649.1| alanine racemase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 450

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 22  RRQYPAQAIVNLKTMRDNMAHLVSVVGGPTSGTAVMGVVKADAYGHGLLPTALAALAGGA 81

Query: 58  QDFFVTSVEEGVKLRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS--- 113
                    E + LR       R  +L  ++ G      D     +  SV  L+      
Sbjct: 82  TWLGTAQSHEALLLRRLGIGPDRCHILTWVYNGAAAPFDDLIAADIDVSVGSLSGIEALA 141

Query: 114 -KLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G      ++VD+GF R G +      AL        + + ++    SHLA AD 
Sbjct: 142 AAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAALVPLAKEGVLRIVGQWSHLAVADS 201

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+  F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 202 PDVPEFVASTDQQIATFKDFTRRMELAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 261

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 262 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 321

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 322 DGIHRSASGFDMEGAKHVEKPGGPVRIMTAEGPRLYRVCGRVCMDQFIVDLHGSAAELGV 381

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FG        +   DD A A+ T +Y++   +  R  + Y
Sbjct: 382 HEGDTVELFGAGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 429


>gi|213692856|ref|YP_002323442.1| alanine racemase [Bifidobacterium longum subsp. infantis ATCC
           15697]
 gi|213524317|gb|ACJ53064.1| alanine racemase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 452

 Score =  219 bits (559), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVNLKTMRDNMAHLVSVVGGPTSGTAVMGVVKADAYGHGLLPTALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS--- 113
                    E + LR       R  +L  ++ G      D     +  SV  L+      
Sbjct: 84  TWLGTAQSHEALLLRRLGIGPDRCHILTWVYNGAAAPFDDLIAADIDVSVGSLSGIEALA 143

Query: 114 -KLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G      ++VD+GF R G +      AL        + + ++    SHLA AD 
Sbjct: 144 AAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAALVPLAKEGVLRIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+  F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDQQIATFKDFTRRMELAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTAEGPRLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FG        +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGAGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|319779475|ref|YP_004130388.1| Alanine racemase, catabolic [Taylorella equigenitalis MCE9]
 gi|317109499|gb|ADU92245.1| Alanine racemase, catabolic [Taylorella equigenitalis MCE9]
          Length = 393

 Score =  219 bits (559), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 87/399 (21%), Positives = 148/399 (37%), Gaps = 51/399 (12%)

Query: 5   EFLRLKIDLTALKNNWHSM----NALSGNA----RTAAVVKDNAYGLGCEKIAPALYN-- 54
             ++  +    L +N H +         N     +T AVVK NAYG G      A     
Sbjct: 3   RPIKAILHTNNLASNLHQITSSVRNYPKNTNKTIKTLAVVKANAYGHGLG----AAIEGF 58

Query: 55  AGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFY- 112
           A      +  + +   LR       I +L G        ++ +  +   + S  Q+ +  
Sbjct: 59  ADADGLGLIDLVDAEVLRKKGNTQEILLLEGFFHKQDIDVLLEGGISTALHSPYQIAYLK 118

Query: 113 --------SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLII 161
                     +          ++ +TG NRLG    EA +        K   L      +
Sbjct: 119 ERLSEMAKESIAKDLKKINLFIKFNTGMNRLGFKPSEAHEIYDQIKTLKSTGLIGTVGTM 178

Query: 162 SHLACADDPSSHVNSVQL-ERFRTLISHYKG--IEASLASSSGILLGPN----YHFQLTR 214
            H A AD     V    + + F+     ++G  +  S+ +S+  +  P           R
Sbjct: 179 MHFANADSDDHEVQVHTIVDDFKKNCLEFEGRKVPVSICNSAACMRFPELASISGTNWIR 238

Query: 215 PGISLYGGTDKINKS-----HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
           PG  LYG      +        ++  ++  A +I I+    G+ V YG +   T+ S IA
Sbjct: 239 PGCVLYGSQYFDYRDSEFTKLDLKPGMSLVADVIAIQNLKVGDSVGYGSKFTATKPSKIA 298

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE 329
           + A GYADGYP +                +  + G    + G+++MDM   D+T    + 
Sbjct: 299 IIACGYADGYPRSADN-----------NTEVGVLGKRAKLAGRVSMDMIAIDVTHIPEVN 347

Query: 330 VGDYIQIFGP-DIKLDDVALASGTTNYDLLVRIGTRYAK 367
           +G  + ++G     +D+VA  SG   Y+L+  I  R  K
Sbjct: 348 IGTPVVLWGEGGPSIDEVAKMSGRIAYELMCGIAPRVPK 386


>gi|20137245|sp|Q9RER4|ALR_AQUPY RecName: Full=Alanine racemase
 gi|6665784|gb|AAF23014.1|AF212103_1 alanine racemase [Aquifex pyrophilus]
          Length = 341

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 31/364 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVT 63
               L+I    + +N   ++  SG  R  AVVK NAYG+G  +++  L     V  F V 
Sbjct: 2   RRAVLEILEERIIHNVKEIHRFSGK-RIIAVVKANAYGIGVREVSRILEGLEEVDAFAVA 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             +EGV+LR    + +I +L GI     K++ + +L PVIS    L           +  
Sbjct: 61  CTQEGVELRECGIKKKILILGGILEEDVKLLEEYDLTPVISDPEHLKVL-----KDRNIK 115

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           + ++ DTG  RLG + +            K  ++  ++SH +   D +   + +Q++RF 
Sbjct: 116 FHVKYDTGMGRLGFTNE----------IIKDPRVEGVMSHFSSPADRN--FSKLQIKRFE 163

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            ++ +Y+ ++     SS  L+         R G+++YG     +    ++  +   AR+I
Sbjct: 164 EILKNYEKVKYIHLESSAGLIYRVPFTTHVRVGLAIYGEKPLKDYPLEVKPALRLRARLI 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            +++      VSYG      R + + V A GYADG   TLS                  +
Sbjct: 224 SVKELPENYPVSYGRTYITKRKTKLGVVAFGYADGLMKTLSNRSFL-----------IFE 272

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  VPI+G ITMDMTM D++ +     GD++ I   +     +A  +GT  Y+++  +  
Sbjct: 273 GRKVPIIGNITMDMTMVDLSGT-EARTGDWVYIVNEERSFTPLARDAGTIPYEIMCNLSR 331

Query: 364 RYAK 367
           R  +
Sbjct: 332 RVER 335


>gi|149184540|ref|ZP_01862858.1| alanine racemase [Erythrobacter sp. SD-21]
 gi|148831860|gb|EDL50293.1| alanine racemase [Erythrobacter sp. SD-21]
          Length = 345

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 124/369 (33%), Positives = 186/369 (50%), Gaps = 26/369 (7%)

Query: 1   MHSNEFLRLKIDLT--ALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M S     L++DL   AL  NW +++ +SG+AR  A VK + YGLG E   P L +AG  
Sbjct: 1   MSSLPPPTLRLDLDREALAANWRALDRMSGSARAGAAVKADCYGLGVEHCVPVLRDAGCG 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           DFFV    E   +  +   A++ VL+G   G E           +    +          
Sbjct: 61  DFFVAHWSEVAAVVEHVDAAQVAVLHGPLDGNEVAYARETGALPVIDSVRQAKLWAESGG 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G   P  L VD+G NRLG+S QE  +    + + ++     ++SHLACAD+  S +N+ Q
Sbjct: 121 G---PCHLMVDSGINRLGISPQEISNPVVQALDVQV-----LLSHLACADE-DSPMNARQ 171

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           LE FR  I   +  E SLA+S+GI LG +YHF LTRPG++LYGG  +   +  +  VV  
Sbjct: 172 LETFRDAIQRVEHCETSLANSAGIALGSDYHFDLTRPGLALYGGVPRPELADHIGQVVFP 231

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +A II  R+  AG+ V Y        +  + V ++GYADG   +  G             
Sbjct: 232 KAAIIQTRQLSAGDGVGYNATFTAPVEMRVGVLSLGYADGILRSWGGAAFRSGE------ 285

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
                   +PILGK++MDM + D++D+  +  GD++++      L D A  +  T Y+LL
Sbjct: 286 ------KRLPILGKVSMDMIVIDLSDAPELGEGDWVEL---PYHLPDAAQQTSLTQYELL 336

Query: 359 VRIGTRYAK 367
             +G R+A+
Sbjct: 337 TVLGNRFAR 345


>gi|170780959|ref|YP_001709291.1| alanine racemase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169155527|emb|CAQ00639.1| alanine racemase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 385

 Score =  219 bits (557), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 82/379 (21%), Positives = 149/379 (39%), Gaps = 28/379 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
            +IDL A+  N  ++ A +G     AVVK + YG G    A A    G     V  + E 
Sbjct: 17  ARIDLGAISTNVRTLRAAAGAPLVMAVVKADGYGHGAVASARAALAGGADRLGVVDIREA 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQ 127
           + LR    +A I               +  +   ++S+ Q+   ++     G +    L+
Sbjct: 77  LALRAAGIEAPILTWMHAPYADFATAIEAGIDLGLNSLRQVREAAEAARRVGRTAEVHLK 136

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VDTG  R G++  E                  +    +   +     +  Q+  F   + 
Sbjct: 137 VDTGLGRNGVTPAEWPGVVAEVAALVAEGRIHLGGVFSHLANAGEDEDRAQVRAFHEAVD 196

Query: 188 --HYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTVVTAE 239
                G+E     LA+++G L  P     + R GI +YG +      +    +   +T  
Sbjct: 197 VVRAAGLEPGIRHLAATAGALRVPEARLDMVRLGIGIYGISPLDGVTSADLGLVPAMTLV 256

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             ++ +++  A   VSYG   + T  + +A+ ++G+ADG P   S               
Sbjct: 257 GSVVAVKRVPADTGVSYGYTYRTTSATTLALVSLGFADGVPRLASNR-----------AP 305

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSL----SIEVGDYIQIFGP----DIKLDDVALASG 351
             I G    + G+I MD  + D+ D +     + VGD   +FG        +++ A A+G
Sbjct: 306 VAIHGARFRVSGRIAMDQFVVDVGDGVVDGRPVAVGDDAVLFGDPATGAPSVEEWAEATG 365

Query: 352 TTNYDLLVRIGTRYAKFYT 370
           T  Y+++ R+  R  + ++
Sbjct: 366 TIGYEIVARVAGRVTRRHS 384


>gi|189439769|ref|YP_001954850.1| slanine racemase [Bifidobacterium longum DJO10A]
 gi|189428204|gb|ACD98352.1| Alanine racemase [Bifidobacterium longum DJO10A]
          Length = 450

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 22  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 81

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 82  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 141

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 142 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 201

Query: 170 P----SSHVNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 202 PDVSEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 261

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 262 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTLDNTSTAIVPLGYA 321

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 322 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKIYRVCGRVCMDQFIVDLHGSAAELGV 381

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 382 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 429


>gi|46190837|ref|ZP_00120988.2| COG0787: Alanine racemase [Bifidobacterium longum DJO10A]
          Length = 452

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVDLKTMRDNMAHLVSVVGGPASGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCHILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 P----SSHVNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVSEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTLDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPVRIMTTEGPKIYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|294011685|ref|YP_003545145.1| alanine racemase [Sphingobium japonicum UT26S]
 gi|292675015|dbj|BAI96533.1| alanine racemase [Sphingobium japonicum UT26S]
          Length = 348

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 25/364 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            LRL++D  AL +NW  +    G+A   A +K + YGLG  ++   L  AG +DFFV++ 
Sbjct: 7   PLRLRMDEGALLSNWRWLKRQGGDAACGAAIKADGYGLGAVEVMRRLLGAGCRDFFVSNW 66

Query: 66  EEGVKLRLYTPQARIF-VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            E   L     +     VL+G+      +   +   PV+ +  Q+  +          P 
Sbjct: 67  AEAAVLEPLVTEGVSLSVLHGVREEDLAVALASRARPVLCTEWQIARWRH----AGGGPC 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VDTG NRLG                   +++ ++SHLACAD+    ++  QLERF  
Sbjct: 123 DVMVDTGMNRLG-----LDWRGDVPARLAGLEIATLMSHLACADE-DGPLSPAQLERFSA 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           L    K    SLA+S+GI +G +Y F +TRPGI+LYGG  +   +  ++ VV  EA+++ 
Sbjct: 177 LRGQVKAARYSLANSAGICMGADYAFDMTRPGIALYGGVPRREAAGHIRQVVVPEAQVLQ 236

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R+  AG+ + Y    +  +D  IAV  +GYADGY    SG  S  +            G
Sbjct: 237 RRRVRAGDTIGYNATYRAPKDMQIAVLNLGYADGYLRCFSGRGSMSA-----------GG 285

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             +P++G+I+MD+T  D++    I   D++++   D KL D A ASG + Y+LL  +G R
Sbjct: 286 RHLPVVGRISMDLTAVDVSGLPDISEEDWLEV---DYKLVDAAAASGLSQYELLTGLGAR 342

Query: 365 YAKF 368
           + + 
Sbjct: 343 FDRV 346


>gi|148552942|ref|YP_001260524.1| alanine racemase [Sphingomonas wittichii RW1]
 gi|148498132|gb|ABQ66386.1| alanine racemase [Sphingomonas wittichii RW1]
          Length = 348

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 118/368 (32%), Positives = 184/368 (50%), Gaps = 26/368 (7%)

Query: 3   SNEFLRLKIDLT--ALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           + EFL L++DL   AL  NW  +   +     AA+   +AYGLG  +++  L +AG +DF
Sbjct: 2   TQEFLPLRLDLDPQALVANWRWLGERAAAPAGAAIK-ADAYGLGAVEVSRRLADAGCRDF 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FV +  E   L      A + VL+G+          +   PV++S       ++  +   
Sbjct: 61  FVATWAETEALGSLPFGAGLSVLHGLREEDLAAALASRARPVLNSP---AMVARWKAAAP 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             P  + +DTG NRLGL+++EA      S      ++ L++SHLACAD+P S +N  Q  
Sbjct: 118 GRPCDVMIDTGMNRLGLTVEEA-----CSGLLDGLEIDLLLSHLACADEPDSPMNERQRA 172

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RF  L         SLA+S+G  LGP Y F L RPGI+LYGG  +      +  VV  EA
Sbjct: 173 RFVDLRGRVAAKRHSLANSAGACLGPAYGFDLIRPGIALYGGIPRPEARGHIVRVVRIEA 232

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           +++ +R   AG+ + YG      R   +A+  +GYADGY    +G            G  
Sbjct: 233 QVLQVRDVPAGDTIGYGATFTAERPMRVAILNLGYADGYLRAFAG-----------NGAA 281

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            + G   P+ G+++MD+   D+T +     GD+++I   D  L+  A  +G + Y+LL  
Sbjct: 282 LVNGRRCPLAGRVSMDLIAVDLTGA-DAAEGDWLEI---DYALESAADRTGLSQYELLTG 337

Query: 361 IGTRYAKF 368
           +G+RY + 
Sbjct: 338 LGSRYQRR 345


>gi|161779848|gb|ABX79410.1| VanTc4 [Enterococcus casseliflavus]
          Length = 700

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 96/364 (26%), Positives = 160/364 (43%), Gaps = 31/364 (8%)

Query: 15  ALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
           AL +N   +  +  +  +  AVVK +AYG   + +A  L  AGV  F V ++EE ++LR 
Sbjct: 350 ALLHNLQEIKRVIPSTTKVMAVVKADAYGCDAKTVAGTLERAGVDFFAVATIEEAIELRR 409

Query: 74  YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFN 133
              ++R+ +L      + K +   +LI  + S       +     G+     L VDTG +
Sbjct: 410 AGIKSRLLILGYTSAQRAKELNRYSLIQTVVSEAHGQALA---RTGLPIECHLAVDTGMH 466

Query: 134 RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLERFRTLISHYK 190
           RLG++    L+     F     +++ I SHL  +D   +        Q+  F  L++   
Sbjct: 467 RLGVAPD--LETVRKLFALPSLKITGIFSHLGSSDQLDTASILRTQAQITCFDDLLAGLS 524

Query: 191 GIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEAR 241
                     L SS GIL  P  H+   RPGI L G     N+       +Q ++T +A 
Sbjct: 525 ARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTKQKINVQPILTLKAL 584

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++  +   AGE + YG      R + I + +IGY DG P  LS    + S          
Sbjct: 585 LVDKKTVAAGEAIGYGLGTVFDRPATIGIVSIGYCDGVPRALSNQGFQLS---------- 634

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
            +G ++P +G + MDM + D+TD   + V   +++          A  + T   +L+ R+
Sbjct: 635 YQGVLLPQIGLVCMDMLLIDLTDYPELAVESSLEVISDWTTA---ADQAQTITNELISRL 691

Query: 362 GTRY 365
           G+R 
Sbjct: 692 GSRI 695


>gi|299139893|ref|ZP_07033065.1| alanine racemase [Acidobacterium sp. MP5ACTX8]
 gi|298598247|gb|EFI54413.1| alanine racemase [Acidobacterium sp. MP5ACTX8]
          Length = 385

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 96/383 (25%), Positives = 161/383 (42%), Gaps = 37/383 (9%)

Query: 8   RLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I    L  N+ ++ A++G      AV+K NAYG G    AP L  AG Q   V+ V 
Sbjct: 4   WIEISSARLAENFRAIQAVAGQGVEALAVIKANAYGHGTTICAPVLAEAGAQWLGVSDVA 63

Query: 67  EGVKLRLYTPQ--ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHP 123
           EG  +R   P    R+ V+ G+       +    L PV+ +   +    +     G    
Sbjct: 64  EGEAVRTALPHSGIRVLVMCGMELADAPALVAHGLTPVVWTPEHIAALERAARSAGHRIQ 123

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             L+VDTG  R G +  ++         + +      I++HL C++   + +   Q ERF
Sbjct: 124 VHLEVDTGMGRQGAAPGEDLARTLEALADSRWVSCEGIMTHLCCSESAEAKITEEQRERF 183

Query: 183 RTLISH-----YKGIEASLASSSGILLGPNYHF-----------QLTRPGISLYGGTDKI 226
            + +        +     LA++S +  G    +            + R G ++YG   +I
Sbjct: 184 ASALDQALAAGMRPEFVHLANTSAVDEGSTMQWIRDTAKSLGARAMVRIGFAIYGHCLEI 243

Query: 227 NKSH--------PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
              H         +  V+  + RII +R   AG  V YG     T+   +A+  +GYADG
Sbjct: 244 EGEHAHAGALAPKVSPVLVWKTRIIGLRGVAAGATVGYGATFVATQPMRLALLPVGYADG 303

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
           Y    S        S    G   I G   P++G+++M++T+ D++    ++ G    + G
Sbjct: 304 YRRAAS--------SGVGNGWVMIAGRRAPVVGRVSMNLTVVDVSGHADVQEGMEAVLLG 355

Query: 339 PDIKLDDVALASGTTNYDLLVRI 361
             +  +D A  SGT  YD+L  I
Sbjct: 356 EGVTAEDQARWSGTIAYDILCGI 378


>gi|310287816|ref|YP_003939074.1| Alanine racemase [Bifidobacterium bifidum S17]
 gi|309251752|gb|ADO53500.1| Alanine racemase [Bifidobacterium bifidum S17]
          Length = 452

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 98/408 (24%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  L++N   +  + G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLATLRDNMAHLVDVVGGPHSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G+    +++I +   I V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGMDVPFDELIDNDIDISVGSLAGIDALA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G      ++VD+GF R G +      AL       ++ +  +    SHLA AD 
Sbjct: 144 DAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAHEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F       +          LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIESFTEFTRRMEAAGIAPEIRHLANTAATLNRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  VSYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLKPAMTLQAQLGTVKDVEAGHGVSYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D + +  V   GG   +       ++ + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMQGAKHVEKAGGPVRVMTSAGPRLLHVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEQYGEPTADDWARAADTISYEVFTCLRNRIPRLY 431


>gi|296453703|ref|YP_003660846.1| alanine racemase [Bifidobacterium longum subsp. longum JDM301]
 gi|296183134|gb|ADH00016.1| alanine racemase [Bifidobacterium longum subsp. longum JDM301]
          Length = 452

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  ++L  +++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRQYPAQAIVNLETMRDNMAHLVSVVGGPNSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     +++I     + V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGTEVPFDELIAADIDVSVGSLPGIDAVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
           +     G      ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 AAARKLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAKEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYK--GIEA---SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +  GI      LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVSSTDRQIETFKDFTRRMEQAGIPPEIRHLANTAATLDRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +  +A++  ++   AG  +SYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLTPAMRLQAQLGTVKDVEAGHGISYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D E +  V   GG   I       +  + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMEGAKHVEKPGGPLRIMTTEGPKLYRVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEDYVEPTADDWARAADTISYEIFTCLRNRIPRLY 431


>gi|241762419|ref|ZP_04760497.1| alanine racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373013|gb|EER62671.1| alanine racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 349

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 185/365 (50%), Gaps = 23/365 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  +  LRL++D +AL  NW S+N ++      A +K N YGLG E++   L  AG +DF
Sbjct: 1   MQISSPLRLELDKSALMANWQSLNRITAG-HCGAAIKANGYGLGAERVRHYLAQAGCRDF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FV+S +E   L        + VL+G+         ++++ PV+ S       ++  +   
Sbjct: 60  FVSSWDEARLLDSSEKDFSLSVLHGLREDDLGYALNSSVKPVLCSP---AMIARWKAHAP 116

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  + VDTG NRLGLS++EA              +  I+SHLACAD+    +N  QLE
Sbjct: 117 NRPCDVMVDTGMNRLGLSMEEAGSGL-----LDGLSIDNILSHLACADEADHPLNQKQLE 171

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RFR L +  +    SLA+S+GI L  +YHF L RPG++LYGG         ++ VV   A
Sbjct: 172 RFRILAARKQAKRYSLANSAGIFLSKDYHFDLARPGLALYGGLPVPQSKDILKPVVAIAA 231

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           + I +R+  AGE + YG      +   +A+  +GYADGY               F  G  
Sbjct: 232 QAIQVREVSAGEAIGYGACFVTPKKMRVAILHVGYADGYWRAF-----------FEKGHA 280

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
              G + P+ G+++MDM    + D+L+ + GD+   F  D  L   +  +G + Y+LL  
Sbjct: 281 RKDGVICPLAGRVSMDMITVALPDALTAQEGDW---FSVDFDLPSASQQTGLSQYELLTG 337

Query: 361 IGTRY 365
           +G RY
Sbjct: 338 LGHRY 342


>gi|323486703|ref|ZP_08092024.1| alanine racemase [Clostridium symbiosum WAL-14163]
 gi|323400084|gb|EGA92461.1| alanine racemase [Clostridium symbiosum WAL-14163]
          Length = 375

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/377 (22%), Positives = 146/377 (38%), Gaps = 28/377 (7%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPAL-YNAGVQDFFVTSVE 66
           + IDL  +K+N   +      +     V+K NA G G  + +  L    G++   V  V 
Sbjct: 9   ITIDLAKIKSNMEKIRNHVGPDVEIMPVLKANACGHGLIRTSDWLVKECGIKRLAVAQVR 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E  +LR    QA I VL G+           NLI  +         S L    G +    
Sbjct: 69  EAEQLRRAGSQAEIMVLGGVPVNNLPYAVQENLILPVFRTQDAALLSALAQENGRTARVH 128

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG  R+G+   ++  +        K  ++  + +H   A+        +Q+ RF  
Sbjct: 129 IKIDTGLGRIGVEKGEQLEELLDGILPLKGLEIEGVFTHFGEAEVTDPEFTKIQISRFEE 188

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVT 237
            +        +       ++   +     H+ + R G+   G    +++     ++TV+ 
Sbjct: 189 ALGQIRARGIQPRYIHATNTPSTVRFKKAHYNMIRTGLLWLGYDPCLDEDNRLGLETVLE 248

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +  +   +  L+G  + Y       RD+++ +A  GY DGY   L             G
Sbjct: 249 WKTFLTNKKYVLSGRSMGYWRSFTAKRDTVVGIACFGYGDGYLEDLG----------KKG 298

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
           G   I G   PI+  + MD T  DITD    E+GD + + G D    I   D+   +   
Sbjct: 299 GYVLIHGKRAPII-SVCMDQTFLDITDIPEAEIGDTVTLIGHDGGEKIDAFDMEKLTE-N 356

Query: 354 NYDL-LVRIGTRYAKFY 369
           +Y + L  I  R  + Y
Sbjct: 357 SYVVYLCNISERPVRIY 373


>gi|284042496|ref|YP_003392836.1| alanine racemase [Conexibacter woesei DSM 14684]
 gi|283946717|gb|ADB49461.1| alanine racemase [Conexibacter woesei DSM 14684]
          Length = 368

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/378 (24%), Positives = 152/378 (40%), Gaps = 25/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +   R  +DL A++ N   +    + +    AVVK + YG G   +A A    G +   V
Sbjct: 2   SRRARAHVDLGAVERNARRLRGCAAADVLLCAVVKADGYGHGAVAVARAALAGGARWLAV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            + +E V LR   P+  I VL  +               V  +   +     L   G   
Sbjct: 62  ATADEAVALRRELPEPPILVLGALDEPDLARALGVGADVVAWTPEFVRCAEALAGNG-GA 120

Query: 123 PYALQVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
              ++VDTG  R    S +EAL            +L  +++H A AD       + QL  
Sbjct: 121 RLHVKVDTGMGRLGARSREEALALAELIDRVAGVRLCGVMTHFATADA-GDAHFAAQLAS 179

Query: 182 FRTLI----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTV 235
           F  +     + + G+    A+S+ +L  P  HF + R G++LYG         +  ++  
Sbjct: 180 FSAIAGVVRARHPGVLVHAANSAAVLRAPAAHFDMVRCGVALYGLDPFQRDPAAARLEPA 239

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   + +  + +   GE V YG + + +  + +A   IGYADG   T  G          
Sbjct: 240 LELRSYVARVARVEPGEAVGYGARFRPSAPTWVATVPIGYADGVRRTTGG---------- 289

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
            G    I G   P+ G ++MD    D      +  GD + + G      I  +++A   G
Sbjct: 290 -GVDVLIGGRRRPLAGTVSMDSLGVDAGSHGDVRAGDEVVLIGARGRERILAEELAARHG 348

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T NY++L  +G+R  + Y
Sbjct: 349 TINYEVLCALGSRVERVY 366


>gi|317402544|gb|EFV83110.1| alanine racemase [Achromobacter xylosoxidans C54]
          Length = 386

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/373 (20%), Positives = 148/373 (39%), Gaps = 26/373 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNA---RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             L  ++D +A+ +N   + A   ++   R  A VK +AYG G  ++ PAL +       
Sbjct: 21  RPLHARVDASAVAHNLVRLRAALPDSDAPRLWATVKADAYGHGLARVLPALRD--ADGLA 78

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V  ++E    R       + V  G++   + ++ DT  + ++ +      +         
Sbjct: 79  VLHLDEARACRQLGWNGPVLVYGGLYSPADTLLLDTPDLHLVITHAAQLQWLAQSPARER 138

Query: 122 HPYALQVDTGFNRLGLSLQE---ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               L+     +  G    +   A +       + L      ++H A AD+         
Sbjct: 139 PAIWLRFAGDIHHTGFCADDYRAAFEQARKLAARGLVSEIGHLNHYARADEADG--VGQA 196

Query: 179 LERFRTLISHYKGIEASLASSSGILL-GPNYHFQLTRPGISLYGGTDKINKS---HPMQT 234
              FR ++    G  ++  S++ +   G     Q  RPG++LYG +   ++S     ++ 
Sbjct: 197 DACFREVVRGLPGPVSTSNSAAVLGHAGLAAGTQWVRPGLALYGASPFADRSAAQLALRP 256

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            ++  ++++ I++  AG  V Y G         + +   GYADGYP              
Sbjct: 257 AMSLHSQVVGIQRVRAGAGVGYSGAFVAPATMDVGIVTCGYADGYPRHA----------- 305

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTT 353
             G    + G    +LG+++MDM   D+       +G  + ++G     +++VA+A+GT 
Sbjct: 306 PTGTPVMVAGVRTRLLGRVSMDMMAVDLDPIPQAAIGSPVTLWGADGPPVEEVAMAAGTI 365

Query: 354 NYDLLVRIGTRYA 366
              LL  +  R  
Sbjct: 366 AAQLLTGLSARVP 378


>gi|18460981|gb|AAK53980.1| VanTc-2 [Enterococcus casseliflavus]
          Length = 706

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 162/381 (42%), Gaps = 38/381 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H     + +    AL +N   +  L     +  AVVK +AYG   + +A  L  AGV  
Sbjct: 343 LHLQRAAK-EFSAPALLHNLQEIKRLIPATTKVMAVVKADAYGCDAKTVAGTLERAGVDF 401

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V ++EE ++LR    ++R+ +L        K +   +LI  I S       +      
Sbjct: 402 FAVATLEEAIELRRAGIKSRLLILGYTSAQHAKEMKHYSLIQTIVSEAHGHALA---QTS 458

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NS 176
           +     L VDTG +RLG++    L+     +     +++ I SHL  +D   +       
Sbjct: 459 IPIECHLAVDTGMHRLGVAPD--LEAVTGLYALPSLKITRIFSHLGSSDQLDTASILRTQ 516

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q+  F  L++             L SS GIL  P  H+   RPGI L G     N+   
Sbjct: 517 AQITCFDDLLAGLSARNIVYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTK 576

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q ++T +A ++  +   AGE + YG      R + I + +IGY DG P  LS   
Sbjct: 577 QKINVQPILTLKALLVDKKTVAAGEAIGYGLGTIFDRPATIGIVSIGYCDGVPRALSNQG 636

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV- 346
            + S           +G ++P +G + MDM + D+TD   + V   +++        D  
Sbjct: 637 FQLS----------YQGALLPQIGLVCMDMLLIDLTDYPELAVESSLEVIS------DWT 680

Query: 347 --ALASGTTNYDLLVRIGTRY 365
             A  + T   +L+ R+G+R 
Sbjct: 681 TTADQAQTITNELISRLGSRI 701


>gi|56552488|ref|YP_163327.1| alanine racemase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|260753846|ref|YP_003226739.1| alanine racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|56544062|gb|AAV90216.1| alanine racemase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|258553209|gb|ACV76155.1| alanine racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 349

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 121/365 (33%), Positives = 183/365 (50%), Gaps = 23/365 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  +  LRL++D +AL  NW S+N ++      A +K N YGLG E++   L  AG +DF
Sbjct: 1   MQISSPLRLELDKSALMANWQSLNRITAG-HCGAAIKANGYGLGAERVRHYLAQAGCRDF 59

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FV+S +E   L        + VL+G+         ++++ PV+ S       ++  +   
Sbjct: 60  FVSSWDEARLLDSSEKDFSLSVLHGLREDDLGYALNSSVKPVLCSP---AMIARWKAHAP 116

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           + P  + VDTG NRLGLS++EA              +  I+SHLACAD+    +N  QLE
Sbjct: 117 NRPCDVMVDTGMNRLGLSMEEAGSGL-----LDGLSIDNILSHLACADEADHPLNQKQLE 171

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           RFR L +  +    SLA+S+GI L  +YHF L RPG++LYGG         ++ VV   A
Sbjct: 172 RFRILAARKQAKRYSLANSAGIFLSKDYHFDLARPGLALYGGLPVPQSKDILKPVVAIAA 231

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           + I +R+  AGE + YG      +   +A+  +GYADGY               F  G  
Sbjct: 232 QAIQVREVSAGEAIGYGACFVTPKKMRVAILHVGYADGYWRAF-----------FEKGHA 280

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
              G + P+ G+++MDM    + D L+   GD+   F  D  L   +  +G + Y+LL  
Sbjct: 281 RKDGVICPLAGRVSMDMITVALPDVLTAHEGDW---FSVDFDLPSASQQTGLSQYELLTG 337

Query: 361 IGTRY 365
           +G RY
Sbjct: 338 LGHRY 342


>gi|307292839|ref|ZP_07572685.1| alanine racemase [Sphingobium chlorophenolicum L-1]
 gi|306880905|gb|EFN12121.1| alanine racemase [Sphingobium chlorophenolicum L-1]
          Length = 348

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 113/364 (31%), Positives = 179/364 (49%), Gaps = 25/364 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            LRL+++  AL +NW  +    G     A +K + YGLG  ++   L +AG +DFFV++ 
Sbjct: 7   PLRLRMEEGALLSNWRWLKRQGGGVACGAAIKADGYGLGAAEVMRRLLDAGCRDFFVSNW 66

Query: 66  EEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            E   L    T +  + VL+G       +   +   PV+ +  Q+  +          P 
Sbjct: 67  AEAAVLESLVTEEVSLSVLHGAREEDMALALTSRARPVLCTEWQIARWK----QAGGGPC 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VDTG NRLG                   +++ ++SHLA AD+    +   QLERF  
Sbjct: 123 DVMVDTGMNRLG-----LDWRGDVPARVAGLEVATLLSHLASADE-DGPLTPTQLERFSA 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           L    K    SLA+S+GI +G +Y F +TRPGI+LYGG  +   +  ++ VV  E +++ 
Sbjct: 177 LQGQVKAARYSLANSAGICMGSDYAFDMTRPGIALYGGVPRREAAGNIRQVVFPETQVLQ 236

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R+  AG+ + Y    +  +D  IAV  +GYADGY    SG  S  +            G
Sbjct: 237 RRRVRAGDTIGYNATYRAAKDMEIAVLNLGYADGYLRGFSGRGSMSA-----------GG 285

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             +P++G+I+MD+T  D+     I  GD++++   D KL D A  SG + Y+LL  +G R
Sbjct: 286 RHLPVVGRISMDLTAIDVGGLPDISEGDWLEV---DYKLADAAAVSGLSQYELLTGLGGR 342

Query: 365 YAKF 368
           + + 
Sbjct: 343 FDRV 346


>gi|224283464|ref|ZP_03646786.1| alanine racemase [Bifidobacterium bifidum NCIMB 41171]
 gi|311064700|ref|YP_003971425.1| alanine racemase [Bifidobacterium bifidum PRL2010]
 gi|313140617|ref|ZP_07802810.1| alanine racemase [Bifidobacterium bifidum NCIMB 41171]
 gi|310867019|gb|ADP36388.1| Alr Alanine racemase [Bifidobacterium bifidum PRL2010]
 gi|313133127|gb|EFR50744.1| alanine racemase [Bifidobacterium bifidum NCIMB 41171]
          Length = 452

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/408 (23%), Positives = 157/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  L++N   +  + G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLATLRDNMAHLVDVVGGPHSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G+    +++I +   I V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGMDVPFDELIDNDIDISVGSLAGIDALA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G      ++VD+GF R G +      AL       ++ +  +    SHLA AD 
Sbjct: 144 DAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAHEGVLHIVGQWSHLAVADS 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F       +          LA+++  L  P  H +LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIESFTEFTRRMEAAGIAPEIRHLANTAATLNRPEIHLELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P        +T +A++  ++   AG  VSYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPRDWHLKPAMTLQAQLGTVKDVEAGHGVSYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D + +  V   GG   +       ++ + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMQGAKHVEKAGGPVRVMTSAGPRLLHVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEQYGEPTADDWARAADTISYEVFTCLRNRIPRLY 431


>gi|325282969|ref|YP_004255510.1| Alanine racemase [Deinococcus proteolyticus MRP]
 gi|324314778|gb|ADY25893.1| Alanine racemase [Deinococcus proteolyticus MRP]
          Length = 370

 Score =  216 bits (550), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 105/374 (28%), Positives = 165/374 (44%), Gaps = 33/374 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAP-ALYNAGVQDFFVTS 64
             R  I   AL+ N   ++  +G      + K NAYG G E +AP A  +  V    V +
Sbjct: 16  RARALISARALRGNLKFLSGKAGVPLLWPM-KANAYGHGVEAVAPVAAESEAVWGMAVAT 74

Query: 65  VEEGVKL--RLYTPQARIFV--LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
             E ++L   L+       V       P +   +    +   +S+      Y++  +   
Sbjct: 75  PAEALELSSVLHGLNCPKPVVLFGASFPDEWPALVAAGVQLTVST------YAEAAALPS 128

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+V+TG NRLG S  EA         ++ GQL+ + SH + A++    ++  Q  
Sbjct: 129 GARAHLKVNTGMNRLGASPAEA--VAVGRRLQERGQLAGVFSHFSEAEEADQTLSRQQFR 186

Query: 181 RFRTLISHYKGIEASLASSSGIL-LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
            F+ +  H+      + +SS +L LGP     L RPG+S YG          +   +T +
Sbjct: 187 TFQEVARHFPEALHHMGNSSAVLNLGPLPGMDLARPGLSSYGVMPSPGTPE-LTPAMTLQ 245

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           ARI  +  A AGE VSY G   L RD+LIA   IGYADGYP   +G             +
Sbjct: 246 ARITYLHTAAAGERVSYNGLTTLQRDTLIATLPIGYADGYPRRATGQ-----------AE 294

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTN 354
             + G   P+LG++ MD  M D T    +  GD++ ++G D     + + +VA  S    
Sbjct: 295 VLLAGERRPVLGRVCMDQLMVDATGL-DVSTGDWVTLWGQDAGGRELHVSEVAQWSEMAE 353

Query: 355 YDLLVRIGTRYAKF 368
           Y++L R+  R  + 
Sbjct: 354 YEILTRLSVRVERV 367


>gi|257877592|ref|ZP_05657245.1| serine/alanine racemase [Enterococcus casseliflavus EC20]
 gi|257811758|gb|EEV40578.1| serine/alanine racemase [Enterococcus casseliflavus EC20]
          Length = 700

 Score =  216 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 159/367 (43%), Gaps = 37/367 (10%)

Query: 15  ALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
           AL +N   +  L     +  AVVK +AYG   + +A  L  AGV  F V ++EE ++LR 
Sbjct: 350 ALLHNLQEIKRLIPATTKVMAVVKADAYGCDAKTVASTLERAGVDFFAVATLEEAIELRR 409

Query: 74  YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFN 133
              ++R+ +L      + K +   +LI  I S       +      +     L VDTG +
Sbjct: 410 AGIKSRLLILGYTSAQRAKELKHYSLIQTIVSEAHGHALA---QTSIPIECHLAVDTGMH 466

Query: 134 RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLERFRTLISHYK 190
           RLG++    L+     +     +++ I SHL  +D   +        Q+  F  L++   
Sbjct: 467 RLGVAPD--LETVTGLYALPSLKITGIFSHLGSSDQLDTASILRTQAQITCFDDLLAGLS 524

Query: 191 GIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEAR 241
                     L SS GIL  P  H+   RPGI L G     N+       +Q ++T +A 
Sbjct: 525 ARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTKQKINVQPILTLKAL 584

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++  +   AGE + YG      R + I + +IGY DG P  LS    + S          
Sbjct: 585 LVDKKTVAAGEAIGYGLGTVFDRPATIGIVSIGYCDGIPRALSNQGFQLS---------- 634

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV---ALASGTTNYDLL 358
            +G ++P +G + MDM + D+TD   + V   +++        D    A  + T   +L+
Sbjct: 635 YQGALLPQIGLVCMDMLLIDLTDYPELAVESSLEVIS------DWTTTADQAQTITNELI 688

Query: 359 VRIGTRY 365
            R+G+R 
Sbjct: 689 SRLGSRI 695


>gi|288919620|ref|ZP_06413949.1| alanine racemase [Frankia sp. EUN1f]
 gi|288349018|gb|EFC83266.1| alanine racemase [Frankia sp. EUN1f]
          Length = 393

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 86/385 (22%), Positives = 143/385 (37%), Gaps = 37/385 (9%)

Query: 7   LRLKIDLTALKNNWHSMNAL------SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             L +D+ A+  N  +++A+       G     AVVK + YG G   +A A    G   F
Sbjct: 14  PTLTLDVAAVTANVRTISAIRRQAGACGAGEVMAVVKADGYGHGLADVARAALAGGATRF 73

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            VTSV E   LR       +                  +     +VP       +     
Sbjct: 74  GVTSVAEAYTLRDLGFTEPVLSWLNPVDADFTQATRAGVEL---AVPSHAHLRAVARQTP 130

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTH---NSFNKKLGQLSLIISHLACADDPSSHVNSV 177
                LQ+DTG  R G   ++     H    +       +  ++ HLACA +P    N  
Sbjct: 131 GAGVHLQLDTGMARDGAPPEQWESLCHTARCAERAGFVHVVGVMGHLACAAEPGHPANRR 190

Query: 178 QLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
             E F   +     +  +  +  LA+++  L  P  H  L+R G  L G  +  +     
Sbjct: 191 GRECFDWGVRVALGAGLRPRDRHLAATAATLSDPRTHHSLSRIGAGLVGIDESGSVRLRP 250

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
              +T  A ++ +R   AG  V YG      R + + +  +GYADG P   +        
Sbjct: 251 ALRLT--APLVTVRAVPAGTAVGYGHTWTSPRATRLGLVPVGYADGLPRCAAARAQVQVA 308

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL---SIEVGDYIQIFGP----DIKLDD 345
                      G    ++G+++MDMT+ D+           GD + +FGP    +    D
Sbjct: 309 -----------GVRRRVVGRLSMDMTVVDLGPDPAACPARAGDVVTLFGPGDGGEPTAAD 357

Query: 346 VALASGTTNYDLLVRIGTRYAKFYT 370
            A  + T  ++++  +G R  +  T
Sbjct: 358 WARWAATLEHEIVTGLGPRLRRVVT 382


>gi|257873842|ref|ZP_05653495.1| serine/alanine racemase [Enterococcus casseliflavus EC10]
 gi|257808006|gb|EEV36828.1| serine/alanine racemase [Enterococcus casseliflavus EC10]
          Length = 700

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 163/381 (42%), Gaps = 38/381 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H     + +    AL +N   +  L     +  AVVK +AYG   + +A  L  AGV  
Sbjct: 337 LHLQRAAK-EFSAPALLHNLQEIKRLIPATTKVMAVVKADAYGCDAKTVASTLERAGVDF 395

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V ++EE ++LR    ++R+ +L      + K +   +LI  I S       +      
Sbjct: 396 FAVATLEEAIELRRAGIKSRLLILGYTSAQRAKELKHYSLIQTIVSEAHGHALA---QTS 452

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NS 176
           +     L VDTG +RLG++    L+     +     +++ I SHL  +D   +       
Sbjct: 453 IPIECHLAVDTGMHRLGVAPD--LETVTGLYALPSLKITGIFSHLGSSDQLDTASILRTQ 510

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q+  F  L++             L SS GIL  P  H+   RPGI L G     N+   
Sbjct: 511 AQITCFDDLLAGLSARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTK 570

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q ++T +A ++  +   AGE + YG      R + I + +IGY DG P  LS   
Sbjct: 571 QKINVQPILTLKALLVDKKTVAAGEAIGYGLGTVFDRPATIGIVSIGYCDGVPRALSNQG 630

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV- 346
            + S           +G ++P +G + MDM + D+TD   + V   +++        D  
Sbjct: 631 FQLS----------YQGALLPQIGLVCMDMLLIDLTDYPELAVESSLEVIS------DWT 674

Query: 347 --ALASGTTNYDLLVRIGTRY 365
             A  + T   +L+ R+G+R 
Sbjct: 675 TTADQAQTITNELISRLGSRI 695


>gi|257867513|ref|ZP_05647166.1| serine/alanine racemase [Enterococcus casseliflavus EC30]
 gi|257801569|gb|EEV30499.1| serine/alanine racemase [Enterococcus casseliflavus EC30]
          Length = 700

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 98/381 (25%), Positives = 163/381 (42%), Gaps = 38/381 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           +H     + +    AL +N   +  L     +  AVVK +AYG   + +A  L  AGV  
Sbjct: 337 LHLQRAAK-EFSAPALLHNLQEIKRLIPATTKVMAVVKADAYGCDAKTVASTLERAGVDF 395

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F V ++EE ++LR    ++R+ +L      + K +   +LI  I S       +      
Sbjct: 396 FAVATLEEAIELRRAGIKSRLLILGYTSAQRAKELKHYSLIQTIVSEAHGHALA---QTS 452

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NS 176
           +     L VDTG +RLG++    L+     +     +++ I SHL  +D   +       
Sbjct: 453 IPIECHLAVDTGMHRLGVAPD--LETVTGLYALPSLKITGIFSHLGSSDQLDTASILRTQ 510

Query: 177 VQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-- 229
            Q+  F  L++             L SS GIL  P  H+   RPGI L G     N+   
Sbjct: 511 AQITCFDDLLAGLSARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTK 570

Query: 230 --HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q ++T +A ++  +   AGE + YG      R + I + +IGY DG P  LS   
Sbjct: 571 QKINVQPILTLKALLVDKKTVAAGEAIGYGLGTVFDRPATIGIVSIGYCDGVPRALSNQG 630

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV- 346
            + S           +G ++P +G + MDM + D+TD   + V   +++        D  
Sbjct: 631 FQLS----------YQGALLPQIGLVCMDMLLIDLTDYPELAVESSLEVIS------DWT 674

Query: 347 --ALASGTTNYDLLVRIGTRY 365
             A  + T   +L+ R+G+R 
Sbjct: 675 TTADQAQTITNELISRLGSRI 695


>gi|94496351|ref|ZP_01302928.1| alanine racemase [Sphingomonas sp. SKA58]
 gi|94424097|gb|EAT09121.1| alanine racemase [Sphingomonas sp. SKA58]
          Length = 348

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 116/369 (31%), Positives = 180/369 (48%), Gaps = 26/369 (7%)

Query: 1   MHS-NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           MH     LRL++D  AL +NW  +  +SG A   A +K N YGLG E++   L  AG +D
Sbjct: 1   MHGYIAPLRLRLDGDALVSNWRWLARMSGPAACGAAIKANGYGLGAEEVMRRLTRAGCRD 60

Query: 60  FFVTSVEEGVKLRLYTPQARIF-VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           FFV++  E + L           VL+G+      I   +   PV+ +  Q+  +      
Sbjct: 61  FFVSNWGEALALEPLMADGVRLSVLHGVRDEDMAIAVASRAKPVLCAPAQVARWRD---- 116

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  + +DTG NRLGL  +                +  ++SHLA AD+    +N+VQ
Sbjct: 117 AGQKSCDVMMDTGMNRLGLDWRGDAAGM-----LAGLTIETVMSHLASADEEV-ALNAVQ 170

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
            +RF  +         SLA+S+GI L  +Y F LTRPGI+LYGG      +  ++ VV  
Sbjct: 171 RDRFVQIALGVPAERYSLANSAGICLNADYRFDLTRPGIALYGGVPHAKAAGHIRQVVQP 230

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           +A+I+  R+ +AG+ + Y       RD  +A+  +GYADGY    SG            G
Sbjct: 231 QAQILQRRRLIAGDSIGYNATFTAERDHEVAILNLGYADGYLRGFSGT-----------G 279

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G  +P+LG+++MD+   D++    +  GD++ I   D  L   + ASG + Y+LL
Sbjct: 280 AASVAGVRLPVLGRVSMDLAAIDVSAVPGLSEGDWVDI---DYDLPRASAASGLSQYELL 336

Query: 359 VRIGTRYAK 367
             +G RY +
Sbjct: 337 TGLGARYDR 345


>gi|219670838|ref|YP_002461273.1| alanine racemase [Desulfitobacterium hafniense DCB-2]
 gi|219541098|gb|ACL22837.1| alanine racemase [Desulfitobacterium hafniense DCB-2]
          Length = 394

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 24/353 (6%)

Query: 7   LRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             + I+L A+ NN+  +   LS  AR  AVVK +AYGLG   +A  L   G   F VT+V
Sbjct: 4   AWIDINLDAIANNYREVTQQLSPAARVMAVVKADAYGLGAVPVAQTLQKLGCPAFAVTTV 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           EEG+ LR +  +  I VL  +   Q       +L   +S    L  +  + +  G+    
Sbjct: 64  EEGLILRQHGVEGIILVLGPVSAEQMAEALTGDLQLTLSDFHMLREWETVAAGLGIEAKV 123

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG  R G   +E  +               + +HLA A          Q+E F+ 
Sbjct: 124 HLKLETGMGRTGFFEKEWGELAAQLKKSPHITPVGVYTHLARAAQRDRAYTRQQVESFQR 183

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVVT 237
            ++      + G+   + +S+  L  P++H+   R G  L G            +Q    
Sbjct: 184 GVNLLEEQGFAGLWKHVCNSAAFLDYPDWHYDFIRTGTLLIGHIPAPAFAGKLKLQDPWV 243

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY-------PLTLSGLDSEH 290
           A+ARI+ +R+   G  V Y    +   ++ +AV  +GYADG+       P  +       
Sbjct: 244 AKARIVSLRRVPIGTFVGYQSIYRTKAETQLAVIPVGYADGFGVQPHFVPQGVWDFIKIV 303

Query: 291 SPSVFLGGKGFIK-------GYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
             +     + +I        G+ VP+ GKI M +T+ D+ +    E GD + +
Sbjct: 304 IKNFLALCRIYIGQESVILQGHRVPVAGKIGMQLTVLDVGNLP-CETGDEVIL 355


>gi|89897688|ref|YP_521175.1| hypothetical protein DSY4942 [Desulfitobacterium hafniense Y51]
 gi|89337136|dbj|BAE86731.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 394

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 91/353 (25%), Positives = 152/353 (43%), Gaps = 24/353 (6%)

Query: 7   LRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             + I+L A+ NN+  +   LS  AR  AVVK +AYGLG   +A  L   G   F VT+V
Sbjct: 4   AWIDINLDAIANNYREVTQQLSPAARVMAVVKADAYGLGAVPVAQTLQKLGCPAFAVTTV 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           EEG+ LR +  +  I VL  +   Q      ++L   +S    L  +  + +  G+    
Sbjct: 64  EEGLMLRQHGVEGIILVLGPVSAEQMAEALASDLQLTLSDFHMLREWETVAAGLGMEAKV 123

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG  R G   +E  +               + +HLA A          Q+E F+ 
Sbjct: 124 HLKLETGMGRTGFFEKEWGELAAQLKQSPHITPVGVYTHLARAAQRDRAYTRQQVESFQR 183

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK--SHPMQTVVT 237
            ++      + G+   + +S+  L  P++H+   R G  L G            +Q    
Sbjct: 184 GVNLLEEQGFAGLWKHVCNSAAFLDYPDWHYDFIRTGTLLIGHFPAPAFAGKLTLQDPWV 243

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY-------PLTLSGLDSEH 290
           A+ARI+ +R+   G  V Y    +   ++ +AV  +GYADG+       P  +       
Sbjct: 244 AKARIVSLRRVPKGTFVGYQSIYRTKAETQLAVIPVGYADGFGVQPHFVPQGVWDFIKIV 303

Query: 291 SPSVFLGGKGFIK-------GYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
             +     + +I        G+ VP+ GKI M +T+ D+ +  S E GD + +
Sbjct: 304 IKNFLALCRIYIGQETVILQGHRVPVAGKIGMQLTVLDVGNL-SCETGDEVIL 355


>gi|153820397|ref|ZP_01973064.1| alanine racemase [Vibrio cholerae NCTC 8457]
 gi|126509060|gb|EAZ71654.1| alanine racemase [Vibrio cholerae NCTC 8457]
          Length = 307

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/316 (30%), Positives = 143/316 (45%), Gaps = 20/316 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+  +     I+L AL++N   +   +  ++  AVVK N YG G   IA      G   F
Sbjct: 1   MNYMKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHAL--GADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL          
Sbjct: 59  GVARIEEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALE-QAQLE 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 L+VD+G +RLG+  ++  DF       + + +    +SH  CAD+        Q
Sbjct: 118 TPVMVWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTTVEQ 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTV 235
            E F +L    +G E SLA+S+G+L  P    +  RPGI +YG +  + KS      Q V
Sbjct: 178 TELFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPV 236

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +T ++ +I +R+  AGE V YGG     RD+ I V AIGY DGYP T             
Sbjct: 237 MTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPN---------- 286

Query: 296 LGGKGFIKGYMVPILG 311
            G    + G    +LG
Sbjct: 287 -GTPVVVNGRRCRLLG 301


>gi|28189428|dbj|BAC56127.1| alanine racemase [Bifidobacterium bifidum]
          Length = 452

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 95/408 (23%), Positives = 158/408 (38%), Gaps = 40/408 (9%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL  L++N   +  + G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLATLRDNMAHLVDVVGGPHSGTAVMGVVKADAYGHGLLPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTPQARI-----FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G+    +++I +   I V S        
Sbjct: 84  TWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGMDVPFDELIDNDIDISVGSLAGIDALA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G      ++VD+GF R G +      AL       ++ +  +    SHLA A+ 
Sbjct: 144 DAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKLVPLAHEGVLHIVGQWSHLAVAEL 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F       +          LA+++  L     HF++TRPGI LY
Sbjct: 204 PDVPEFVASTDRQIELFTEFTRCMEAAGIAPEISHLANTAATLNRSEIHFEMTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
           G         P +      +T +A++  ++   AG  VSYG       ++  A+  +GYA
Sbjct: 264 GYEPDPAMGTPREWHLKPAMTLQAQLGTVKDVEAGHGVSYGRTYLTPDNTSTAIVPLGYA 323

Query: 277 DGYPLTLSGLDSEHSPSV-FLGGKGFI----KGYMVPILGKITMDMTMFDITDS---LSI 328
           DG   + SG D + +  V   GG   +       ++ + G++ MD  + D+  S   L +
Sbjct: 324 DGIHRSASGFDMQGAKHVEKAGGPVRVMTSAGPRLLHVCGRVCMDQFIVDLHGSAAELGV 383

Query: 329 EVGDYIQIFGP-------DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             GD +++FGP       +   DD A A+ T +Y++   +  R  + Y
Sbjct: 384 HEGDTVELFGPGRGEQYGEPTADDWARAADTISYEVFTCLRNRIPRLY 431


>gi|282934109|ref|ZP_06339388.1| alanine racemase [Lactobacillus jensenii 208-1]
 gi|281301856|gb|EFA94121.1| alanine racemase [Lactobacillus jensenii 208-1]
          Length = 337

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 80/349 (22%), Positives = 136/349 (38%), Gaps = 31/349 (8%)

Query: 37  KDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
           K NAYG G  K+A      G + F V  ++E  +LR  +    I VL G+ P  E  I  
Sbjct: 2   KANAYGHGAVKVAKMAARNGAEGFCVAVLDEAFELRDSSIVDPILVL-GVTPANEACIAA 60

Query: 97  TNLIPVISSVPQLTFYSKLMSCGVS--HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL 154
            + I + +   +    +              L +D+G  R+G S  +     +       
Sbjct: 61  AHNISLTAPSLEWLEAADKALAKKDMVLKIHLAIDSGMGRIGFSEDQEFIAANEFLRNST 120

Query: 155 GQLSL-IISHLACADDPSSHVNSVQLERFRT--LISHYKGIEASLASSSGILLGPNYHFQ 211
             +   + +H A AD   SH    Q++RF     I   K     +A+++  +   N H  
Sbjct: 121 HFIVEGMFTHFASADSRDSHYFDYQVKRFNHLKNILSIKPKWIHVANTASSIFDKNIHSD 180

Query: 212 LTRPGISLYGGTDKINKSHPM-------QTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
           + R GI LYG     N + P        +  ++  + +  ++K  +G  + YG       
Sbjct: 181 IVRFGIGLYGLNPSSNPASPDLESEINLKPALSLVSELSFVKKVHSGYGIGYGSTYVADS 240

Query: 265 DSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD 324
           D  I    +GYADG    LSG             K  +  +  PI+G+I MD  M  + +
Sbjct: 241 DQWIGTVPVGYADGVIRKLSGF------------KIKVGAHYCPIVGRICMDQLMVLLPE 288

Query: 325 SLSIEVGDYIQIFGPDIK----LDDVALASGTTNYDLLVRIGTRYAKFY 369
            + +  G  + I+  + +    +   A    T +Y+L   +  R  + Y
Sbjct: 289 KMPV--GTKVVIYSNNPEDPNFIKKAADYVDTIHYELACLLSDRLPRIY 335


>gi|18476140|gb|AAK58491.1| serine racemase VanTc3 [Enterococcus casseliflavus]
          Length = 700

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 97/367 (26%), Positives = 159/367 (43%), Gaps = 37/367 (10%)

Query: 15  ALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
           AL +N   +  L     +  AVVK +AYG   + +A  L  AGV  F V ++EE ++LR 
Sbjct: 350 ALLHNLQEIKRLIPATTKVMAVVKADAYGCDAKTVASTLERAGVDFFAVATLEEAIELRR 409

Query: 74  YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFN 133
              ++R+ +L      + K +   +LI  I S       +      +     L VDTG +
Sbjct: 410 AGIKSRLLILGYTSAQRAKELKHYSLIQTIVSEAHGHALA---QTSIPIECHLAVDTGMH 466

Query: 134 RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV---NSVQLERFRTLISHYK 190
           RLG++    L+     +     +++ I SHL  +D   +        Q+  F  L++   
Sbjct: 467 RLGVAPD--LETVTGLYALPSLKITRIFSHLGSSDQLDTASILRTQAQITCFDDLLAGLS 524

Query: 191 GIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS----HPMQTVVTAEAR 241
                     L SS GIL  P  H+   RPGI L G     N+       +Q ++T +A 
Sbjct: 525 ARNIAYGLTHLQSSYGILNYPEKHYDYVRPGILLTGSLSVPNEPTKQKINVQPILTLKAL 584

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++  +   AGE + YG      R + I + +IGY DG P  LS    + S          
Sbjct: 585 LVDKKTVAAGEAIGYGLGTVFDRPATIGIVSIGYCDGVPRALSNQGFQLS---------- 634

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV---ALASGTTNYDLL 358
            +G ++P +G + MDM + D+TD   + V   +++        D    A  + T   +L+
Sbjct: 635 YQGALLPQIGLVCMDMLLIDLTDYPELAVESSLEVIS------DWTTTAYQAQTITNELI 688

Query: 359 VRIGTRY 365
            R+G+R 
Sbjct: 689 SRLGSRI 695


>gi|307701631|ref|ZP_07638647.1| alanine racemase [Mobiluncus mulieris FB024-16]
 gi|307613134|gb|EFN92387.1| alanine racemase [Mobiluncus mulieris FB024-16]
          Length = 457

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 173/450 (38%), Gaps = 97/450 (21%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +R  +DL A + N   M   +  ++  A+VK +AYG G E+++ A   AG Q   V  V
Sbjct: 11  PVRAVVDLAAYRANLARMRKFAPRSQQMAIVKADAYGHGMEQVSLAAIEAGAQWLGVAKV 70

Query: 66  EEGVKLRLYTPQ----------------------------------ARIFVLYGIHPGQE 91
            E  +LR +  +                                   RIF          
Sbjct: 71  AEAYRLRQFLDKSGVARDHFGDTPTSALLRSRMFQSDAAGLPTVQRPRIFAWLYTPSTDL 130

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
           K      +   +S++ QL   S      G+     L+VDTG  R G +L E  +    + 
Sbjct: 131 KSTIKAEIDLSVSTLDQLDQVSHAADAAGLRARIHLKVDTGLCRGGATLSEFENLCKLAR 190

Query: 151 NKK---LGQLSLIISHLACADDPSSH---VNSVQLERFRTL-----ISHYKGIEASLASS 199
            ++   L ++S I SH A +D+PS+        QL  F        +S  +     +A++
Sbjct: 191 ARERSGLVEVSAIWSHFARSDEPSAEAEAFTQGQLATFNQAYDIALVSGLQPKLRHMAAT 250

Query: 200 SGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVS 255
             IL  P  HF L R GIS YG +        ++  ++ V+  E  +  ++K  AG  VS
Sbjct: 251 GAILWYPESHFNLVRVGISAYGLSPNPQIASAQNLGIRPVMRLETEVAQVKKVAAGSAVS 310

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           YGG+      + +A+  IGYADG+   L G             K ++ G++ P++G+I M
Sbjct: 311 YGGEWVAAEPTWLALLPIGYADGFMRRLQG-----------KAKVWVAGHLWPVVGRIPM 359

Query: 316 DMTMFDITDS---------LSIEVGDYIQIFGPDIKL------------DDVALASG--- 351
           D  + ++  +           ++ GD   IFG   +L              VA       
Sbjct: 360 DQIILNLGSAIDGAGDLIPPPLKPGDLAVIFGDPNRLPPGFPPGEPAGESTVADLWNHDP 419

Query: 352 ------------TTNYDLLVRIGTRYAKFY 369
                       T +Y++L  +     + Y
Sbjct: 420 VPSADALAAAADTISYEILTAVDKDTPRIY 449


>gi|269977008|ref|ZP_06183982.1| alanine racemase [Mobiluncus mulieris 28-1]
 gi|269934839|gb|EEZ91399.1| alanine racemase [Mobiluncus mulieris 28-1]
          Length = 457

 Score =  213 bits (542), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 173/450 (38%), Gaps = 97/450 (21%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +R  +DL A + N   M   +  ++  A+VK +AYG G E+++ A   AG Q   V  V
Sbjct: 11  PVRAVVDLAAYRANLARMRKFAPRSQQMAIVKADAYGHGMEQVSLAAIEAGAQWLGVAKV 70

Query: 66  EEGVKLRLYTPQ----------------------------------ARIFVLYGIHPGQE 91
            E  +LR +  +                                   RIF          
Sbjct: 71  AEAYRLRQFLDKSGVARDHFGDTPTSALLRSRMFQSDAAGLPTVQRPRIFAWLYTPSTDL 130

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
           K      +   +S++ QL   S      G+     L+VDTG  R G +L E  +    + 
Sbjct: 131 KSTIKAEIDLSVSTLDQLDQVSHAADAAGLRARIHLKVDTGLCRGGATLSEFENLCKLAR 190

Query: 151 NKK---LGQLSLIISHLACADDPSSH---VNSVQLERFRTL-----ISHYKGIEASLASS 199
            ++   L ++S I SH A +D+PS+        QL  F        ++  +     +A++
Sbjct: 191 ARERSGLVEVSAIWSHFARSDEPSAEAEAFTQGQLATFNQAYDIALVNGLQPKLRHMAAT 250

Query: 200 SGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVS 255
             IL  P  HF L R GIS YG +        ++  ++ V+  E  +  ++K  AG  VS
Sbjct: 251 GAILWYPESHFNLVRVGISAYGLSPNPQIASAQNLGIRPVMRLETEVAQVKKVAAGSAVS 310

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           YGG+      + +A+  IGYADG+   L G             K ++ G++ P++G+I M
Sbjct: 311 YGGEWVAAEPTWLALLPIGYADGFMRRLQG-----------KAKVWVAGHLWPVVGRIPM 359

Query: 316 DMTMFDITDS---------LSIEVGDYIQIFGPDIKL------------DDVALASG--- 351
           D  + ++  +           ++ GD   IFG   +L              VA       
Sbjct: 360 DQIILNLGSAIDGAGDLIPPPLKPGDLAVIFGDPNRLPPGFPPGEPAGESTVADLWNHDP 419

Query: 352 ------------TTNYDLLVRIGTRYAKFY 369
                       T +Y++L  +     + Y
Sbjct: 420 VPSADALAAAADTISYEILTAVDKDTPRIY 449


>gi|227876092|ref|ZP_03994211.1| alanine racemase [Mobiluncus mulieris ATCC 35243]
 gi|227843391|gb|EEJ53581.1| alanine racemase [Mobiluncus mulieris ATCC 35243]
          Length = 457

 Score =  212 bits (541), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 103/450 (22%), Positives = 172/450 (38%), Gaps = 97/450 (21%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +R  +DL A + N   M   +  ++  A+VK +AYG G E+++ A   AG Q   V  V
Sbjct: 11  PVRAVVDLAAYRANLARMRKFAPRSQQMAIVKADAYGHGMEQVSLAAIEAGAQWLGVAKV 70

Query: 66  EEGVKLRLYTPQ----------------------------------ARIFVLYGIHPGQE 91
            E  +LR +  +                                   RIF          
Sbjct: 71  AEAYRLRQFLDKSGVARDHFGDTPTSALLRSRMFQSDAAGLPTVQRPRIFAWLYTPSTDL 130

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
           K      +   +S++ QL   S      G+     L+VDTG  R G +L E  +    + 
Sbjct: 131 KSTIKAEIDLSVSTLDQLDQVSHAADAAGLRARIHLKVDTGLCRGGATLSEFENLCKLAR 190

Query: 151 NKKLG---QLSLIISHLACADDPSSH---VNSVQLERFRTL-----ISHYKGIEASLASS 199
            ++     ++S I SH A +D+PS+        QL  F        ++  +     +A++
Sbjct: 191 ARERSGLAEVSAIWSHFARSDEPSAEAEAFTQGQLATFNQAYDIALVNGLQPKLRHMAAT 250

Query: 200 SGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVS 255
             IL  P  HF L R GIS YG +        ++  ++ V+  E  +  ++K  AG  VS
Sbjct: 251 GAILWYPESHFNLVRVGISAYGLSPNPQIASAQNLGIRPVMRLETEVAQVKKVAAGSAVS 310

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           YGG+      + +A+  IGYADG+   L G             K ++ G++ P++G+I M
Sbjct: 311 YGGEWVAAEPTWLALLPIGYADGFMRRLQG-----------KAKVWVAGHLWPVVGRIPM 359

Query: 316 DMTMFDITDS---------LSIEVGDYIQIFGPDIKL------------DDVALASG--- 351
           D  + ++  +           ++ GD   IFG   +L              VA       
Sbjct: 360 DQIILNLGSAIDGAGDLIPPPLKPGDLAVIFGDPNRLPPGFPPGEPAGESTVADLWNHDP 419

Query: 352 ------------TTNYDLLVRIGTRYAKFY 369
                       T +Y++L  +     + Y
Sbjct: 420 VPSADALAAAADTISYEILTAVDKDTPRIY 449


>gi|313674767|ref|YP_004052763.1| alanine racemase [Marivirga tractuosa DSM 4126]
 gi|312941465|gb|ADR20655.1| alanine racemase [Marivirga tractuosa DSM 4126]
          Length = 385

 Score =  212 bits (540), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 90/393 (22%), Positives = 158/393 (40%), Gaps = 38/393 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   R+++  +ALK N + +    G NA  ++VVK NAYG G E   P    AGV  
Sbjct: 1   MVKHS-SRIELKQSALKANINFIKKKIGKNAILSSVVKANAYGHGIESFVPMAEKAGVHH 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSV-PQLTFYSKLMS 117
           F V S  E  ++     +    ++ GI +        + N+   + +             
Sbjct: 60  FSVASSFEAEEVLNACHEKSEIMIMGIIYEEDIPWAIENNIEFFVYNYDRLPITLEAAKK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHV-N 175
            G S    ++V+TG NR G+  +E          NK+      + +H   A+  S+    
Sbjct: 120 VGKSAKVHIEVETGANRTGMPAEEFPKAISFLKKNKEHVVFQGLCTHFGGAESLSNQFKI 179

Query: 176 SVQLERFRTLIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
             Q  +++  +       Y+     +A S+  L  P+  + L R G++ YG     +   
Sbjct: 180 DKQKAKYKEFLKICRDKKYEPKIRHIACSAAALAMPDTVYDLVRVGVAQYGFWPSPDIYY 239

Query: 228 ---------KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                        ++ + + +  I+ IR    G+ + YG   + +    IAV  +GY++G
Sbjct: 240 HHLQETDKKSDGALKRIFSWKTDIMDIRDVPEGDFIGYGTAFQASHKMKIAVMPLGYSNG 299

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
           YP  LS             G   I G   PI+G I M++ M DIT     +VGD + + G
Sbjct: 300 YPRALSNR-----------GYVLIAGKKAPIVGLINMNLFMVDITHIPQAKVGDEVVLIG 348

Query: 339 PD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
                 I +     ++   N ++L R+ +   +
Sbjct: 349 RQKNNVINVSSFTNSTQLLNNEMLSRLPSAIPR 381


>gi|319943626|ref|ZP_08017907.1| alanine racemase [Lautropia mirabilis ATCC 51599]
 gi|319742859|gb|EFV95265.1| alanine racemase [Lautropia mirabilis ATCC 51599]
          Length = 386

 Score =  212 bits (540), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 80/374 (21%), Positives = 143/374 (38%), Gaps = 34/374 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS----------GNARTAAVVKDNAYGLGCEKIAPALYN 54
             L   +  +A+ +N   +               + R  AVVK +AYG G    A AL  
Sbjct: 17  RTLTASVSPSAMAHNLALIRRQVQENRPDGHVQADTRLWAVVKADAYGHGL---ANALTG 73

Query: 55  -AGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS 113
            A      +   E    LR +     I +L G     +        + +    P+   + 
Sbjct: 74  FAEADGMALLEFEAADWLRRHGWTKPILMLEGAFDATDVAQAAAQGLTLAIHQPRHLQW- 132

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                G      L+++TG NRLGL   +   +          +L  +++H A AD P   
Sbjct: 133 LAAHDGPPVDVYLKLNTGLNRLGLKPDDVDAYLTQVLATPGVRLRGMMTHFANADTPGGA 192

Query: 174 -----VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK 228
                         +  +   + +E  +A+S+ +   P  +    RPGI+LYG +    +
Sbjct: 193 LQPLATFDAVARAVQARLPAGQTLEHCVANSAALFTLPQAYRAWARPGIALYGASPFAGQ 252

Query: 229 S---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           S     ++  +     ++ +++   GE   YGG     +   + +   GYADGYP     
Sbjct: 253 SAASLGLRPAMQLTGNVLGVQQLTPGEATGYGGIFVAEQPVRVGIVNCGYADGYPR---- 308

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    + G     LG+++MDM   D+T       G  ++++G  + +D+
Sbjct: 309 -------VAPTGTPVVVDGVRTRTLGRVSMDMLAVDLTPIPDAGPGTPVELWGDAVSIDE 361

Query: 346 VALASGTTNYDLLV 359
           VA ++GT  Y+L+ 
Sbjct: 362 VAESAGTLGYELMC 375


>gi|306819368|ref|ZP_07453076.1| alanine racemase [Mobiluncus mulieris ATCC 35239]
 gi|304647855|gb|EFM45172.1| alanine racemase [Mobiluncus mulieris ATCC 35239]
          Length = 457

 Score =  212 bits (539), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 173/450 (38%), Gaps = 97/450 (21%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +R  +DL A + N   M   +  ++  A+VK +AYG G E+++ A   AG Q   V  V
Sbjct: 11  PVRAVVDLAAYRANLARMRKFAPRSQQMAIVKADAYGHGMEQVSLAAIEAGAQWLGVAKV 70

Query: 66  EEGVKLRLYTPQ----------------------------------ARIFVLYGIHPGQE 91
            E  +LR +  +                                   RIF          
Sbjct: 71  AEAYRLRQFLDKSGVARDHFGDTPTSALLRSRMFQSDAAGLPTAQRPRIFAWLYTPSTDL 130

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
           K      +   +S++ QL   S      G+     L+VDTG  R G +L E  +    + 
Sbjct: 131 KSTIKAEIDLSVSTLDQLDQVSHAADAAGLRARIHLKVDTGLCRGGATLSEFENLCKLAR 190

Query: 151 NKK---LGQLSLIISHLACADDPSSH---VNSVQLERFRTL-----ISHYKGIEASLASS 199
            ++   L ++S I SH A +D+PS+        QL  F        +S  +     +A++
Sbjct: 191 ARERSGLVEVSAIWSHFARSDEPSAEAEAFTQGQLATFNQAYDIALVSGLQPKLRHMAAT 250

Query: 200 SGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVS 255
             IL  P  HF L R GIS YG +        ++  ++ V+  E  +  ++K  AG  VS
Sbjct: 251 GAILWYPESHFNLVRVGISAYGLSPNPQIASAQNLGIRPVMRLETEVAQVKKVAAGSAVS 310

Query: 256 YGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITM 315
           YGG+      + +A+  IGYADG+   L G             K ++ G++ P++G+I M
Sbjct: 311 YGGEWVAAEPTWLALLPIGYADGFMRRLQG-----------KAKVWVAGHLWPVVGRIPM 359

Query: 316 DMTMFDITDS---------LSIEVGDYIQIFGPDIKL------------DDVALASG--- 351
           D  + ++  +           ++ GD   IFG   +L              VA       
Sbjct: 360 DQIILNLGSAIDGAGDLIPPPLKAGDLAVIFGDPNRLPPGFPPGEPAGESTVADLWNHDP 419

Query: 352 ------------TTNYDLLVRIGTRYAKFY 369
                       T +Y++L  +     + Y
Sbjct: 420 VPSADALAAAADTISYEILTAVDKDTPRIY 449


>gi|332638810|ref|ZP_08417673.1| alanine racemase [Weissella cibaria KACC 11862]
          Length = 371

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 84/375 (22%), Positives = 139/375 (37%), Gaps = 26/375 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              RL I   A+ +N   +   S  +     VK NAYG G   ++ A    G+    V  
Sbjct: 7   RPTRLNISQAAVTHNIQEVRQASQASFMFLAVKANAYGFGLIPMSQAAVAGGIDGLAVAL 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHP 123
           ++EG+ LR         +L    P   ++I + NLI  + S+         L   G    
Sbjct: 67  LDEGLALRQAGLTEPTLILGITLPQYARLIAENNLIATVGSLAWLEAALQYLPVNGQRLQ 126

Query: 124 YALQVDTGFNRLGLSL--QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
             L VDTG  R+G     +          +++    + I++H A AD P       QL R
Sbjct: 127 VNLAVDTGMGRIGFRERTELEAAIAFMDEHREAFTYASIMTHFAEADAPEVDYFHQQLNR 186

Query: 182 FRTLISHYKGIEASL--ASSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVV 236
           +  L    +         S + +         + R G  +YG      +      ++ V+
Sbjct: 187 WHALTDGIEMPPLVHLANSGAAMYHADEMPTDVIRAGTVVYGVEPSRGELRSDDYLEPVL 246

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T E  ++ ++K   GE VSYG          I    +GY DG P  L G           
Sbjct: 247 TLETELVFVKKCHEGEGVSYGHTYYAHEGEWIGTVPLGYGDGLPRKLQGF---------- 296

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
             +  + G   PI+GK+ MD  M  +     + +G  + I G     +  L+DV   +  
Sbjct: 297 --EVIVDGVKRPIVGKLAMDQMMISLP--YELPIGTTVTIIGRQGEQENTLEDVGQYTDL 352

Query: 353 TNYDLLVRIGTRYAK 367
             +++   +  R  +
Sbjct: 353 APWEISTNLQERIYR 367


>gi|15830939|ref|NP_309712.1| alanine racemase [Escherichia coli O157:H7 str. Sakai]
 gi|13361149|dbj|BAB35108.1| alanine racemase 2 [Escherichia coli O157:H7 str. Sakai]
          Length = 329

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/335 (25%), Positives = 138/335 (41%), Gaps = 22/335 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  ++D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
             + G     +G ++MDM   D+T     ++G  +
Sbjct: 286 VLVDGVRTMTVGTVSMDMLAVDLTPCPQRDIGTPV 320


>gi|91224603|ref|ZP_01259864.1| alanine racemase [Vibrio alginolyticus 12G01]
 gi|91190491|gb|EAS76759.1| alanine racemase [Vibrio alginolyticus 12G01]
          Length = 409

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 139/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I+L   ++N     +   G  +  AV+K +AYG G   + P +    +    V S 
Sbjct: 45  AWLEINLGQFRDNIEQFKSHMDGKTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
            E   +R    + ++  +     G+ + + D N+  +I +  Q    SKL    G     
Sbjct: 105 AEAQTVRDSGFKGQLMRVRSADIGEIEAVIDLNVEELIGTAEQAKALSKLAEKAGKEIKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC--ADDPS---SHVNS 176
            L ++    G N + ++ +           +    +  I++H     ADD     +    
Sbjct: 165 HLALNDGGMGRNGVDMTTEAGKKEALEIAQQAGVNIVGIMTHFPNYNADDVRQKLASFKD 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +        I   +A+S   L  P     + RPG  LYG      +     ++V
Sbjct: 225 SSAWLIKEANLKRDNILLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y      +++SL+A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASVHHLPKNSTVGYDSSYTTSKESLMANIPVGYSDGYPRKMGNT---------- 331

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I G    + G  +M+ TM D+T    +E G  + +FG      I   ++   +  
Sbjct: 332 -AEVLINGQRAKVAGVASMNTTMVDVTGIKDVEPGSEVVLFGSQQGKTISAAEMEKHAEV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    G+   + Y
Sbjct: 391 IFPELYTVWGSANPRVY 407


>gi|330829095|ref|YP_004392047.1| alanine racemase [Aeromonas veronii B565]
 gi|328804231|gb|AEB49430.1| Alanine racemase [Aeromonas veronii B565]
          Length = 408

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 142/354 (40%), Gaps = 24/354 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            +     L++DL A ++N  ++    G+   +  A++K +AYG G + + P++  A +  
Sbjct: 37  QTASNAWLEVDLGAFEHNIQTLKDRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPC 96

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
             + S EE    R      R+  +    P + +      +  +I S+      + +    
Sbjct: 97  IGIASNEEARVAREKGFTGRLMRVRAATPDEVEQALPYKMEELIGSLVSAQGIADIAQRH 156

Query: 119 GVSHPYALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             + P  + +++     N + L L +A          K      I++H    +     + 
Sbjct: 157 HTTIPVHIALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKMG 216

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q +     +          I    A+S   L  P+ +F + RPG  LYG  D I    
Sbjct: 217 LAQFKLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYG--DSIPSHT 274

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + V+  + ++  +    AG  V Y     L RDS +A   +GY+DGY  +LS      
Sbjct: 275 EYKRVMAFKTQVASVNHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRSLSN----- 329

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                      I+G  VP++GK +M+  M D+TD   ++ GD + +FG     +
Sbjct: 330 ------KAYVLIQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFGRQGDAE 377


>gi|117619060|ref|YP_857116.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117560467|gb|ABK37415.1| alanine racemase [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 408

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/354 (21%), Positives = 144/354 (40%), Gaps = 24/354 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            +     L++DL A ++N  ++    G+   +  A++K +AYG G + + P++  AG+  
Sbjct: 37  QTASNAWLEVDLGAFEHNIQTLKDRLGDKGPKICAIMKADAYGHGIDLLVPSVVKAGIPC 96

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
             + S EE    R      R+  +    P + +      +  +I S+      + +    
Sbjct: 97  IGIASNEEARVAREKGFTGRLMRVRAATPAEVEQALPYKMEELIGSLVSAQGIADIAQRH 156

Query: 119 GVSHPYALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             + P  + +++     N + L L ++ +        K      I++H    +     + 
Sbjct: 157 HTNIPVHIALNSAGMSRNGIDLRLADSKEDALAMLKLKGITPVGIMTHFPVEEKEDVKMG 216

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q +     +          I    A+S   L  P+ +F + RPG  LYG  D I    
Sbjct: 217 LAQFKLDSQWLLEAGKLDRSKITIHAANSFATLEVPDAYFDMVRPGGLLYG--DSIPSYT 274

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + V+  + ++  +    AG  V Y     L RDS +A   +GY+DGY   LS      
Sbjct: 275 EYKRVMAFKTQVASVNHYPAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSN----- 329

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                      I+G  VP++GK +M+  M D+TD   ++ GD + +FG   + +
Sbjct: 330 ------KAYVLIQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFGRQGEAE 377


>gi|311745246|ref|ZP_07719031.1| alanine racemase [Algoriphagus sp. PR1]
 gi|126577772|gb|EAZ81992.1| alanine racemase [Algoriphagus sp. PR1]
          Length = 385

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 80/393 (20%), Positives = 157/393 (39%), Gaps = 38/393 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  +   R+++  ++L  N + +    G   R ++VVK NAYG G  +       AGV  
Sbjct: 1   MVRHS-SRIELSQSSLTTNINFIKKKIGKGVRISSVVKANAYGHGITEFVKMAEKAGVSH 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISS-VPQLTFYSKLMS 117
           F   S  E  ++     +    ++ GI +        +  +   + +             
Sbjct: 60  FATASAFEAEEVMDAKSENSEVMIMGILYDEDIDWAVENGIEFYVFNYARLPLVLKSAQK 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHV-N 175
            G      ++V+TG NR GL+ +E L   +    + +      + +H   A++ S+    
Sbjct: 120 LGKKAKVHIEVETGANRTGLTDKEFLPTLNFLKKHSEDIIFKGLCTHFGGAENISNQFKI 179

Query: 176 SVQLERFRTLISHY-----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--- 227
           + Q +R++  +              +A S+  L   +  + + R G++ YG     +   
Sbjct: 180 NKQHDRYKNFLKKCKQKGMMPEVRHIACSAAALAYKDTVYDMVRIGVAQYGFWPSPDIYY 239

Query: 228 ---------KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                        ++ + T +  ++ IR    GE + YG   +  +D  +AV  +GY++G
Sbjct: 240 MHLQEIGKQSDGALKRIFTWKTDVMDIRDVDEGEFIGYGTSFQAVQDMKVAVMPLGYSNG 299

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
           YP   S             G   IKG  VPI+G I M++ M D+T+   +E+G+ + + G
Sbjct: 300 YPRAQSNR-----------GHVLIKGKKVPIVGLINMNLFMVDVTNIPGVELGEEVVLVG 348

Query: 339 PD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
                 I +      +   N ++L R+ +   +
Sbjct: 349 RQKNNTINISSFTQVTQLLNNEMLSRLPSAIPR 381


>gi|119717707|ref|YP_924672.1| alanine racemase [Nocardioides sp. JS614]
 gi|119538368|gb|ABL82985.1| alanine racemase [Nocardioides sp. JS614]
          Length = 380

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/374 (20%), Positives = 144/374 (38%), Gaps = 31/374 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R  IDL A+ +N   +   +      AVVK + +G G  ++A      G     VT+++
Sbjct: 15  PRPDIDLAAVAHNTRLLAGRATG-ELMAVVKADDFGHGAVELARTALANGATWLGVTTID 73

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR     A +                  +   +  +P L       +        L
Sbjct: 74  EALALRAAGLTAPLLSWLNPVDADLAAAVRAGVDLGVPGLPHLD----ATTAARGARVHL 129

Query: 127 QVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            VD G  R G +             +  +   Q+  ++ HL CA+DP+   N++   RF 
Sbjct: 130 HVDAGMARDGAAPATWGQLCRAARRAEQRGEIQVVGVMGHLGCAEDPTDECNALGRTRFA 189

Query: 184 TLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
             +     +  +     LA+++  L  P  H  ++R G  L G       +  ++  +T 
Sbjct: 190 WALETARAAGLRPAHRHLAATAATLTDPRSHHTMSRVGAGLVGIDPS--HTTRLRPALTL 247

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A ++ +R+   G  V YG   + +  + + +  +GYADG P   SG             
Sbjct: 248 IAPVVQVRRVRGGTPVGYGHAYRTSAATHLGLVPLGYADGLPRLASGRAEVLVRGRRRPV 307

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
            G            I+MD  + D+ +   ++VG+ + +FGP    +  + + A  S T  
Sbjct: 308 VGR-----------ISMDQLVVDLGERP-VDVGEGVTVFGPGDAGEPTVAEWAAWSETIE 355

Query: 355 YDLLVRIGTRYAKF 368
           ++++  IG R  + 
Sbjct: 356 HEIVTGIGARVPRR 369


>gi|15896574|ref|NP_349923.1| alanine racemase [Clostridium acetobutylicum ATCC 824]
 gi|20137413|sp|Q97DY9|ALR2_CLOAB RecName: Full=Alanine racemase 2
 gi|15026412|gb|AAK81263.1|AE007830_4 Alanine racemase [Clostridium acetobutylicum ATCC 824]
 gi|325510735|gb|ADZ22371.1| Alanine racemase [Clostridium acetobutylicum EA 2018]
          Length = 395

 Score =  210 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 155/379 (40%), Gaps = 34/379 (8%)

Query: 8   RLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           + +I+L+ LK N+  +   L  N +  AV+K +AYG G   IA  L N     F V  + 
Sbjct: 30  KAEINLSQLKRNFDIIQGFLKPNTKFMAVLKGDAYGHGIRPIAKELINLKCDVFGVVRLI 89

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PYA 125
           E   LR    +  I +L  I P Q   +   N+IP++ S   +    +  S   +     
Sbjct: 90  EAFTLRKAGIKTPIMLLAPISPSQAAWVIRYNIIPMVDSEEIVEALDQSASQNDTIVKLH 149

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++++TG NR G++ + A+ F      K L      +       D +      Q+E F  +
Sbjct: 150 VKINTGLNRYGVNPENAVKFIREIHEKYLHVQVDGVYTHFQDPDYNPDFTHKQIECFNNI 209

Query: 186 I-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVT 237
           I        +      A+S+GI+  P  H+ + R G  L+G   +    N    ++T++ 
Sbjct: 210 IFQLQKQKLRPRIIHAANSTGIIRYPEAHYDMVRCGTLLFGLEHEQGQRNMPKGIKTLME 269

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + RI+ +R   AGE   YG      +DS +A+ A GY DG                   
Sbjct: 270 LKGRIMKVRTIRAGEAGGYGSTFVAKKDSKVAIIAFGYGDGISRGWK------------- 316

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPD----IKLDDVALASGT 352
            +  + G  VP++    MD  M DI++    ++  D   I G      I   +   + G 
Sbjct: 317 -EVLVAGKRVPVV-NYFMDGLMVDISNIDETVKELDEAVIVGNQGDESITWLEACKSLG- 373

Query: 353 TNY--DLLVRIGTRYAKFY 369
            +Y  + +  I  R  K Y
Sbjct: 374 -SYVDEQIQCITERVPKKY 391


>gi|332669025|ref|YP_004452033.1| alanine racemase [Cellulomonas fimi ATCC 484]
 gi|332338063|gb|AEE44646.1| alanine racemase [Cellulomonas fimi ATCC 484]
          Length = 382

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 77/373 (20%), Positives = 130/373 (34%), Gaps = 30/373 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL +D  A+  N   +   +      AVVK + +G G   +A      G     VT+V 
Sbjct: 17  PRLLVDPAAVAANTRLLAGRARG-DLMAVVKADGFGHGAVTVARTALAHGATSLGVTTVA 75

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + LR    +A +                  +   +           ++         L
Sbjct: 76  EALALRDAGLRAPVLSWLNPVDADFASAVAAGVELAVPDA---AHLRAVLDTAPGARVHL 132

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFR 183
            +DTG  R G            + + +         ++ HLACAD P    N+    RF 
Sbjct: 133 HLDTGLARDGAEPAAWPSLCRLARSAERTGRVRVVGVMGHLACADRPRHPANAEGRSRFA 192

Query: 184 T--LISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                +   G+      LA+++  L  P  H    R G  L G       +  +   ++ 
Sbjct: 193 WGVRTARAAGLRPSVRHLAATAATLTDPRSHHTTVRVGAGLVGIDPSG--TTRLAWAMSL 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A ++ +R+  AG  V YG      R + +A+  +GYADG P  + G             
Sbjct: 251 TAPVVSVRRVRAGTPVGYGHTWTAPRATTLALLPVGYADGLPRAVPGRAEVLLRGRRRPV 310

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTN 354
            G +           +MD T+ D+ D   +  G+   + GP    +   +D A       
Sbjct: 311 VGRV-----------SMDQTVVDVGDEP-VRPGEVAVLLGPGTGGEPTPEDWADWFDVLP 358

Query: 355 YDLLVRIGTRYAK 367
           +++L   G R A+
Sbjct: 359 HEVLTGFGPRVAR 371


>gi|213612760|ref|ZP_03370586.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 322

 Score =  209 bits (531), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 86/337 (25%), Positives = 140/337 (41%), Gaps = 22/337 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG   +T++  I + A GYADGYP                G  
Sbjct: 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTP 285

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
             + G     +G ++MDM   D+T      +G  +++
Sbjct: 286 VLVDGIRTRTVGTVSMDMLAVDLTPCPQAGIGTPVEL 322


>gi|160947043|gb|ABX54690.1| serine racemase [Enterococcus faecalis]
          Length = 366

 Score =  208 bits (530), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 95/363 (26%), Positives = 156/363 (42%), Gaps = 31/363 (8%)

Query: 16  LKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
           L +N   +   +  + +  AVVK NAYG+    +A  L   G+  F V +++E + LR  
Sbjct: 17  LLHNVQVIKKNIPKSTKIMAVVKANAYGINAVNVAIILEYIGIDFFAVATIDEAIALRKN 76

Query: 75  TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNR 134
              + I +L    P +   +    L     ++        L   G      L+VDTG +R
Sbjct: 77  GITSNILILGYTTPTKVDDLIHYELTQ---TIVSKEHAYFLNKTGKKIMCHLKVDTGMHR 133

Query: 135 LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERFRTLISHYKG 191
           LG+     L+     FN    ++  + SHL  ADD S         Q+ R+ T+I+  K 
Sbjct: 134 LGVEP--TLEEICPIFNYPFLKIKGVYSHLGSADDLSEEGKQRTIKQISRYNTIIAELKR 191

Query: 192 IE-----ASLASSSGILLGPNYHFQLTRPGISLYG----GTDKINKSHPMQTVVTAEARI 242
                    L SS GIL      +   RPGI LYG        +     +Q VV  +A++
Sbjct: 192 KRVDVGLTHLQSSYGILNYSELAYDYVRPGIILYGLLSNNDHNVKLHLDLQPVVAVKAQL 251

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I  +K   GE + YG   +LT    I V +IGYADG P  LS  +               
Sbjct: 252 ISKKKIAPGEYIGYGTDTQLTSSKTIGVLSIGYADGIPRNLSNGEYC----------VVF 301

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           +   +P +G+I MDM + D+++   I +G  + +      +++++    T   +++  +G
Sbjct: 302 EDKQIPQIGRICMDMMLVDLSNCSDIPLGVMVDVL---PNIEEISQIQSTITNEIISCLG 358

Query: 363 TRY 365
           +R 
Sbjct: 359 SRL 361


>gi|254430331|ref|ZP_05044034.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
           [Cyanobium sp. PCC 7001]
 gi|197624784|gb|EDY37343.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
           [Cyanobium sp. PCC 7001]
          Length = 829

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 97/383 (25%), Positives = 174/383 (45%), Gaps = 26/383 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            S    RL +DL A+++N     AL        AV+K  AYG    ++A AL ++G+   
Sbjct: 455 ESMAPRRLLVDLDAIRDNITRFRALCGPEVAILAVLKAWAYGTELPRLAAALQDSGIDWI 514

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V++ +EG  +R       + V+       +K +       + S          L S G 
Sbjct: 515 GVSAADEGAVIRRAGVHRPVLVMLMDPDEVDKAVRWRVTPLIYSLPFAQALVRTLQSMGA 574

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
                L+++TG  RLG++ +EAL       +  +  ++ +++HLA ADDP++      QL
Sbjct: 575 HLEVHLEIETGMGRLGVAPEEALAAARLLRDSGVVTVTGVMTHLAGADDPAADDETRAQL 634

Query: 180 ERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI--NKSHPM 232
           ERF  +++         +    A++SG +  P   + + R G+ L+G        ++  +
Sbjct: 635 ERFDAVMARLHQELGTPLLVHAAATSGAVRFPQSRYGMVRLGLGLFGLHPSPAVAEAIEL 694

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSL-IAVAAIGYADGYPLTLSGLDSEHS 291
           +  V   +R++ +R+   G+ + Y G   ++ +   I + A GY DG P   S       
Sbjct: 695 ELAVAFISRLVQVREYGRGQRIGYNGTYVVSAERQRIGIVAAGYNDGVPWRFSNR----- 749

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVA 347
                 G+  I+G  + +LG+++MD    D+       VGD + IFG      ++ +  A
Sbjct: 750 ------GEVMIQGRRLAVLGRVSMDSMAVDLDPLPEATVGDEVLIFGAYEGQVLRPEQAA 803

Query: 348 LASGTTNYDLLVRI-GTRYAKFY 369
           L +GT  YDLLV++ G R  + +
Sbjct: 804 LQAGTIPYDLLVQVDGRRVQRIF 826


>gi|225420488|ref|ZP_03762791.1| hypothetical protein CLOSTASPAR_06833 [Clostridium asparagiforme
           DSM 15981]
 gi|225040871|gb|EEG51117.1| hypothetical protein CLOSTASPAR_06833 [Clostridium asparagiforme
           DSM 15981]
          Length = 331

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 135/319 (42%), Gaps = 26/319 (8%)

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           EEGV LR +     I VL   HP Q   +    + P + ++ Q    S+L    GV    
Sbjct: 1   EEGVILRRHGIGKMILVLGVTHPDQYGELIRYQIRPTVFTLRQAERLSELACREGVRAKL 60

Query: 125 ALQVDTGFNRLGLSLQEA-LDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L VDTG +R+G+   E   +   +       ++  + +H A AD+        QL  + 
Sbjct: 61  HLAVDTGMSRIGMEPDETSAEMVLSMSRLPGIEIEGMFTHFARADERDKESARAQLAAYL 120

Query: 184 TLIS--HYKGIEASLAS----SSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQT 234
                   +GIE  L      +  +   P+    L R GIS+YG             +  
Sbjct: 121 NFSELLKSRGIEIPLKHCSNSAGIVEGLPSNSLDLVRAGISIYGLYPSDEVDRETVHLTP 180

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  ++RI  I+    G  VSYGG     R + IA   +GY DGYP +LS          
Sbjct: 181 VMELKSRISYIKTIRPGTPVSYGGTFVARRPTRIATIPVGYGDGYPRSLSSR-------- 232

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALAS 350
              G   I+G   PILG++ MD  M D+TD    E  D + +     G  I ++++A   
Sbjct: 233 ---GSVLIRGRRAPILGRVCMDQFMVDVTDIPEAEEEDVVTLIGRDGGDQISVEELARLG 289

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           G  +Y+L+  +G R  + Y
Sbjct: 290 GGFHYELICDLGKRVPRVY 308


>gi|329890838|ref|ZP_08269181.1| alanine racemase [Brevundimonas diminuta ATCC 11568]
 gi|328846139|gb|EGF95703.1| alanine racemase [Brevundimonas diminuta ATCC 11568]
          Length = 378

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 128/367 (34%), Positives = 197/367 (53%), Gaps = 17/367 (4%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R+ + L A+  N+ +M      A  AAVVK +AYGLG  +IAPALY+AG + FFV  + E
Sbjct: 22  RIHVSLRAVAANYRAMCDQVAPAACAAVVKADAYGLGAARIAPALYDAGCRAFFVAHLFE 81

Query: 68  GVKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
            V LR   P  A +FVL G+ PG E        IPV++S  Q+  +++L    G     A
Sbjct: 82  AVDLRRVLPADAELFVLNGLAPGAEYAALAAGAIPVLNSREQVEGWARLGRAVGRPLAAA 141

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +Q DTG +RLGL  ++A          +  +  LI+SHLA AD P    N+ Q + F  +
Sbjct: 142 IQFDTGMSRLGLPPEDAAWAFAPEGPIRWIEPRLILSHLAVADTPGHAGNARQRQAFERI 201

Query: 186 ISH-YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           ++H  +G+  SLA+S+G  LG +YH+ L R G +L+G     + +  MQ VV    R+I 
Sbjct: 202 LAHAPQGVARSLANSAGCWLGQDYHYDLCRVGAALFGLDAS-SSAKAMQPVVEVTGRVIQ 260

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R   AG  V YG          +A   +GYADG+P  LS           +GG  F +G
Sbjct: 261 TRAVPAGAGVGYGWAVTAAEGMRLATIGVGYADGWPRQLS----------AVGGAAF-EG 309

Query: 305 YMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            ++P +G+I+MD  + D++      ++ GD++++ GP+   + +AL   T +Y+++ R+G
Sbjct: 310 RLLPFVGRISMDSLVVDVSALPPDALKPGDHVELLGPNRPPEQLALEGATIDYEVIARLG 369

Query: 363 TRYAKFY 369
            R  + Y
Sbjct: 370 RRLCREY 376


>gi|149910818|ref|ZP_01899452.1| alanine racemase [Moritella sp. PE36]
 gi|149806152|gb|EDM66132.1| alanine racemase [Moritella sp. PE36]
          Length = 408

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 76/376 (20%), Positives = 136/376 (36%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I+L   + N       +    +  AV+K +AYG G   + P +   G+    +TS  
Sbjct: 45  WLEINLGQFEQNIQQFKKHIKPGTKICAVMKADAYGNGIRGLMPTVIAQGIPCIAITSNA 104

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           E   +R      ++  +      + K   + N+  +I S  Q    +      G S    
Sbjct: 105 EARLVRSSGFDGQLMRVRSASIDEIKQSLELNIEELIGSESQAEQLAALYEKTGKSIKVH 164

Query: 126 LQ-VDTGFNRLGLSLQEAL--DFTHNSFNKKLGQLSLIISHLACAD-----DPSSHVNSV 177
           +   D G  R G+ +  A            K  ++  I++H    D     D        
Sbjct: 165 IALNDGGMGRNGIDMSSAAGKQEAVAIATSKGIEVVGIMTHFPNYDAEYIRDKLVGFKQH 224

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                +    +   I    A+S   L        + RPG   YG       +    ++V+
Sbjct: 225 SAWLMQNASLNRDDILLHAANSYTALNVKEAQLDMVRPGGVFYGDLPT---NLEYPSIVS 281

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + RI  I     G+ V Y     + R S++A   +GY+DGYP  +              
Sbjct: 282 FKTRIASIHHLPEGQTVGYDSTYTVKRASILANLPVGYSDGYPRKMGNKS---------- 331

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ TM D+TD   +  G  + +FG +    I + ++   +   
Sbjct: 332 -EVIINGQRAKVVGMTSMNTTMVDVTDIQGVFPGQEVTLFGAENKERITISEMEKNADLI 390

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G+   +FY
Sbjct: 391 FPELYTLWGSANPRFY 406


>gi|228470384|ref|ZP_04055287.1| Mur ligase domain protein/alanine racemase [Porphyromonas uenonis
           60-3]
 gi|228307966|gb|EEK16849.1| Mur ligase domain protein/alanine racemase [Porphyromonas uenonis
           60-3]
          Length = 843

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 156/376 (41%), Gaps = 25/376 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL AL NN  S  AL S   R   + K   YG+G  ++A AL    +    V   
Sbjct: 477 TTLEIDLEALVNNLKSYKALLSPETRIIVMAKAQGYGIGAYELAKALEQQDLAALAVALA 536

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PY 124
           +EG +LR       I V+       E +        + +      F   +   G+SH P 
Sbjct: 537 DEGKELRSKGILLPIIVMNPEVEAFEVMTQSRLEPEIYNERILREFARHVERQGLSHYPV 596

Query: 125 ALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLE 180
            +++DTG +R G +   A            + L ++  I +HLA AD+   S     Q  
Sbjct: 597 HIELDTGMHRTGFTPDRATLEHLAQTLHEVEPLIRVQSIFTHLAAADEPMMSDFTEQQFA 656

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            +     +            + +++G+    ++H+ + R G+ LYG +   + +      
Sbjct: 657 LYDEGADYLTSQLSYRPLRHVQNTAGMERYNHHHYDMARLGVGLYGISATGSLTLEPVAK 716

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ I+    GE + YG + ++     I +  IGYADGY    S           
Sbjct: 717 LR--TTLLQIKTIPDGETIGYGRRGQVAPGGQIGIIPIGYADGYDRRFSCGV-------- 766

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFG-PDIKLDDVALASGTT 353
             G   I   + PI+G + MD  M D+T     +  GD + IFG P +++ D+A   GT 
Sbjct: 767 --GSVMIHDTLCPIVGNVCMDTCMVDLTALQGKVAEGDEVIIFGVPGLQVSDLAERIGTI 824

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+++ ++  R  + Y
Sbjct: 825 PYEVISKLSPRIKRTY 840


>gi|315181783|gb|ADT88696.1| alanine racemase [Vibrio furnissii NCTC 11218]
          Length = 409

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I+LT  ++N       ++ + +  AV+K NAYG G + + P +    +    + S 
Sbjct: 45  AWLEINLTQFRDNIEQFKSKMNNHTKICAVMKANAYGNGIQGLMPTILEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPY 124
            E   +R    +  +  +     G+ K     N+  +I S  Q     +     G     
Sbjct: 105 AEAQAVRDSGFKGELMRVRSASLGEIKDAMHLNVEELIGSAEQAKALSALAKKAGHDIKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++       +      K  ++  I++H    D        +  N+
Sbjct: 165 HLALNDGGMGRNGIDMTTDAGKKESLQIAAAKGVRIVGIMTHFPSYDADEVRQKLASFNT 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + + I   +A+S   L  P     + RPG  LYG      +     ++V
Sbjct: 225 HSAWLIKEAKLNREDILLHVANSFTALNVPEAQLDMVRPGGVLYGDQPTNPE---YPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y       +DSL+A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSTFTTQQDSLMANIPVGYSDGYPRKMGN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
             +  I G    ++G  +M+ TM D+T    ++ G  + +F    G  I   ++   +  
Sbjct: 331 KAQVLINGQRANVVGVASMNTTMVDVTHIKGVKAGSEVVLFGHSQGETISASEMENNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    G+   + Y
Sbjct: 391 IFPELYTLWGSANPRVY 407


>gi|56697512|ref|YP_167880.1| alanine racemase [Ruegeria pomeroyi DSS-3]
 gi|56679249|gb|AAV95915.1| alanine racemase [Ruegeria pomeroyi DSS-3]
          Length = 377

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 183/362 (50%), Gaps = 26/362 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL +NW ++NA +  A TAAVVK + YGLG  ++A  L  AG + FFV + EEG
Sbjct: 10  LTIDLDALADNWQALNART-TAETAAVVKADGYGLGAARVAARLARAGARTFFVAAAEEG 68

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +R    P   I V  G   G   I+    L P+I+SV Q+  + + +     H + +Q
Sbjct: 69  AAVRKAVGPDPMIGVFSGHMEGDAGILRANRLTPMINSVDQMLRHVEQL---PGHRFGVQ 125

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG NRLGL  ++       +  +     +L++SHLACAD+P   +N  QL  F+ +  
Sbjct: 126 LDTGMNRLGLEPEDWAQLREIALRQ---NPALVMSHLACADEPGHDMNRKQLRLFKEMTD 182

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
             K    SLA++ GILLGP+YHF L RPG+ LYGG            VVT +  +I +R 
Sbjct: 183 GIKA-PRSLAATGGILLGPDYHFDLCRPGVGLYGGEPFDEAKA----VVTLDLPVIQVRD 237

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
              GE V YG      R   IA  A GYADG    +    +  +                
Sbjct: 238 LAEGETVGYGNSWTAPRACRIATVAAGYADGLHRAMGRGITLFAGKTA-----------C 286

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           P++G+I+MD+   D++          +Q+      +DD+A A+GT  Y++L  +G RY +
Sbjct: 287 PVVGRISMDLITVDVSGLD--HEPASLQLLNRLQTVDDLAEAAGTIGYEILTSMGRRYRR 344

Query: 368 FY 369
            Y
Sbjct: 345 SY 346


>gi|229823671|ref|ZP_04449740.1| hypothetical protein GCWU000282_00972 [Catonella morbi ATCC 51271]
 gi|229786908|gb|EEP23022.1| hypothetical protein GCWU000282_00972 [Catonella morbi ATCC 51271]
          Length = 387

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/387 (21%), Positives = 151/387 (39%), Gaps = 35/387 (9%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +      I+L A+++N   M      +    AVVK NAYG G   +A A   AG Q   V
Sbjct: 7   HRPTVAIINLNAIQHNVREMKRHLEPDQALYAVVKANAYGHGAVAVAKAALAAGAQGLAV 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV- 120
            +V+EG++LR     A+  ++ G + P     +    L  ++S +         +     
Sbjct: 67  ATVDEGIELRQAGLLAQPILILGLVDPRAIAELVYYRLTVIVSDLIWFQEAWAQLVSNHQ 126

Query: 121 -------SHPYALQVDTGFNRLG-LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
                       L +DTG  R+G  +++E   F              + +H + A     
Sbjct: 127 ESLLDDAKLKVHLALDTGMGRIGLRTVEEVQAFAEGIQVFPWVNWEGVDTHFSTAGGGDP 186

Query: 173 HVNSVQLERFRTLISHYKG---IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK- 228
                Q  +++ L++       +     S+ G+         + R GIS+YG   K  + 
Sbjct: 187 AYVETQWAKWQELLTAVPDSVTVRHYANSAMGVWFKRQPVSSIERFGISMYGMHPKDERS 246

Query: 229 --SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                +Q  +   + I+ +++   G  +SYG   +   D  +A   IGYADG+      +
Sbjct: 247 SLPIDLQPALQLISEIVYVKQVEKGSKISYGASYEAQEDEWVATIPIGYADGWFRHYKDI 306

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD-- 344
                          ++G+  P+LG I MD  M  +     + VG  + + G D  L+  
Sbjct: 307 ------------PVLVEGHACPVLGVINMDQLMIRLPH--QVPVGTTVTLIGQDHHLENH 352

Query: 345 --DVALASGTTNYDLLVRIGTRYAKFY 369
             D+A   GT +Y++   +  R  + Y
Sbjct: 353 AADLARLVGTISYEIFCGLSDRIPRIY 379


>gi|218295810|ref|ZP_03496590.1| alanine racemase [Thermus aquaticus Y51MC23]
 gi|218243548|gb|EED10076.1| alanine racemase [Thermus aquaticus Y51MC23]
          Length = 361

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/371 (24%), Positives = 146/371 (39%), Gaps = 33/371 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +++DL AL  N+  + A +       V+K +AYG G   IA  L   GV  F V ++
Sbjct: 5   RAWIEVDLGALWANYLLLKARAQG-EVIPVLKADAYGHGALPIARFLEERGVGRFAVATI 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCGVSHPY 124
            EG  LR    +  + +L  +HP + +      L P +S+         +  + G++   
Sbjct: 64  AEGRALREGGVRGEVLLLGSLHPLEAEAALRWGLTPTLSTLEAARALAERAWALGLTPRA 123

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG NR+G   +EAL          +    +        +D       VQ  RF+ 
Sbjct: 124 HLKVDTGMNRVGFPWEEALAALRAVEALGVRVEGVYSHLATAGED--EAFVEVQRGRFQR 181

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +             +S  LL      +  R G++LYG          ++ V+   AR  L
Sbjct: 182 VREALGPGYFYHLENSYGLLLHG--GENARVGLALYGLVP----GFGLRPVLRLLARPTL 235

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +++  AG+ V YGG         +A   +GYADG P              F+ G     G
Sbjct: 236 VKRLKAGDRVGYGGAFVAQGGEWLATLPVGYADGLPRG---------AVAFVRGP---GG 283

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQI------FGPDIKLDDVALASGTTNYDLL 358
               + G+I+MD T   +   + +    +         FGP   L   A A GT  Y++ 
Sbjct: 284 ERFRVAGRISMDQTTVLLPGPVDL----WAVFEVLSPDFGPT-GLLAWAEARGTIPYEVA 338

Query: 359 VRIGTRYAKFY 369
           V +  R  + Y
Sbjct: 339 VHLSRRLPRVY 349


>gi|323692158|ref|ZP_08106401.1| hypothetical protein HMPREF9475_01264 [Clostridium symbiosum
           WAL-14673]
 gi|323503732|gb|EGB19551.1| hypothetical protein HMPREF9475_01264 [Clostridium symbiosum
           WAL-14673]
          Length = 369

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/359 (22%), Positives = 139/359 (38%), Gaps = 26/359 (7%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPAL-YNAGVQDFFVTSVE 66
           + IDL  +K+N   +      +     V+K NA G G  + +  L    G++   V  V 
Sbjct: 9   ITIDLAKIKSNMEKIRNYVGPDVEIMPVLKANACGHGLIRTSDWLVKECGIKRLAVAQVR 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPYA 125
           E  +LR    QA I VL G+           NLI  +         S L    G +    
Sbjct: 69  EAEQLRRAGSQAEIMVLGGVPVNNLPYAVQENLILPVFRTQDAALLSALAQENGRTARVH 128

Query: 126 LQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           +++DTG  R+G+   ++  +        K  ++  + +H   A+        +Q+ RF  
Sbjct: 129 IKIDTGLGRIGVEKGEQLEELLDGILPLKGLEIEGVFTHFGEAEVTDPEFTEIQISRFEE 188

Query: 185 LI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVT 237
            +        +       ++   +     H+ + R G+   G    +++     ++TV+ 
Sbjct: 189 ALGQIRARGIQPRYIHATNTPSTVRFKKAHYNMIRTGLLWLGYDPCLDEDNRLGLETVLE 248

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            +  +   +  L+G  + Y       RD+++ +A  GY DGY   L             G
Sbjct: 249 WKTFLTNKKYVLSGRSMGYWRSFTAKRDTVVGIACFGYGDGYLEDLG----------KKG 298

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
           G   I G   PI+  + MD T  DITD    E+GD + + G D    I   D+   + T
Sbjct: 299 GYVLIHGKRAPII-SVCMDQTFLDITDIPDAEIGDTVTLIGHDGSEKIDAFDMEKLTKT 356


>gi|87199969|ref|YP_497226.1| alanine racemase [Novosphingobium aromaticivorans DSM 12444]
 gi|87135650|gb|ABD26392.1| alanine racemase [Novosphingobium aromaticivorans DSM 12444]
          Length = 356

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 119/362 (32%), Positives = 173/362 (47%), Gaps = 23/362 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL+ID  AL +NW +++A+SG A   A VK +AYGLG  +++  L  AG +DFFV    
Sbjct: 17  LRLRIDADALASNWRALDAMSGTATAGAAVKADAYGLGAARVSRILVGAGCRDFFVAHWA 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E   L  + P A I VL+G     E           + +        +    G      +
Sbjct: 77  EVPNLLPHVPAASIAVLHGPMNAAEAAFARATGARPVLNSLSQARLWQETGGGR---CHV 133

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG +RLGL++ E  D      +  L      +SHLA AD+     N  Q  RF T+ 
Sbjct: 134 MVDTGMSRLGLAMSEIADPALADLDVDLC-----LSHLASADEDV-PQNEQQRLRFETVR 187

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +       SLA+S+GI LG  +H  +TRPGI+LYGG  +   +  ++ V   EA +I +R
Sbjct: 188 AAIPARRYSLANSAGIALGAGFHADVTRPGIALYGGIARPEFAGTIRQVARPEAAVIQVR 247

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G+ V Y       R   + V AIGYADGY    +G            G     G  
Sbjct: 248 HLQPGDKVGYNAIFTADRPMRVGVLAIGYADGYLRCWTGR-----------GSFLFDGVE 296

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           VP+LG+++MD+T+ D+    S   GD++        L   A  SG + Y+LL  +G R++
Sbjct: 297 VPVLGRVSMDLTIVDLGGVPSCNEGDWLV---ASYDLPRAARESGLSQYELLTVLGRRFS 353

Query: 367 KF 368
           + 
Sbjct: 354 RR 355


>gi|311744950|ref|ZP_07718735.1| alanine racemase [Algoriphagus sp. PR1]
 gi|126577457|gb|EAZ81677.1| alanine racemase [Algoriphagus sp. PR1]
          Length = 384

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/394 (20%), Positives = 157/394 (39%), Gaps = 39/394 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQD 59
           M +  +  L+I   A + N   + +  G +    AVVK NAYG G +++      AG++ 
Sbjct: 1   MIATSY--LEISAKAYRQNIRYIRSEIGPSTVISAVVKGNAYGHGIQQMVEIAEKAGIRH 58

Query: 60  FFVTSVEEGVKL-RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MS 117
           F   S +E  ++ R    ++ I +L  ++P +   I    +   +    +L     +  S
Sbjct: 59  FSTFSSDEAWEVFRCSKKKSEIMILGMLYPEEMSDIIKAGINFYVYDFRRLELAVTISKS 118

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS- 176
            G+     ++++TGF+R G               +        +       +  S+    
Sbjct: 119 LGIQAKIHIELETGFHRTGFEWSSREKLATYLKEQMDHIQLKGLCSHYAGAESVSNFVRV 178

Query: 177 ----VQLERFRTLISH--YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-- 228
                    F+T  +       +   A S+  L+ P     + R GI+ YG         
Sbjct: 179 KNQIEVYNNFKTYFNQKGIHFEKYHTACSAATLIFPETIMDMVRIGIAGYGFWPTKETFF 238

Query: 229 ----------SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                      +P++ +V+ ++ ++ I+    GE V YG      ++  +A+  +GYA G
Sbjct: 239 AKLNSLPKANKNPLKRLVSWKSTVMSIKPVKMGEFVGYGNSFMALQNMRLAIVPVGYAHG 298

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
           Y   LS             G+  I+G    ++G +TM+    +IT+  +IEVGD + + G
Sbjct: 299 YSRLLSNQ-----------GQVLIRGKFCNVVGTVTMNTIALNITNLKNIEVGDEVVLIG 347

Query: 339 ----PDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
                +I +   + ++   NY+LL R+     + 
Sbjct: 348 KQGNKEITVASFSESTQQVNYELLTRLPKDIPRR 381


>gi|295698664|ref|YP_003603319.1| alanine racemase [Candidatus Riesia pediculicola USDA]
 gi|291156967|gb|ADD79412.1| alanine racemase [Candidatus Riesia pediculicola USDA]
          Length = 362

 Score =  206 bits (525), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 89/369 (24%), Positives = 159/369 (43%), Gaps = 23/369 (6%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I   AL  N   +  L+ N+R  A+VK NAYG G + +   L +  V  F V+++EE  K
Sbjct: 6   IRKKALIYNIKKIQKLTNNSRIIAIVKSNAYGHGSKFVTRTLKDF-VDYFGVSNIEEAHK 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +     +  I  L G    +E  +     + V+    +     +           ++++T
Sbjct: 65  IVDDGIKNSIISLMGFINYEELKLASQLRLEVVVHNHEQINILEKEKIKFPIAVWMKINT 124

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV----NSVQLERFRTLI 186
           G NRLG    +A+   +     K  +  +       + +           +QL+RF+  I
Sbjct: 125 GMNRLGFLPDQAVKIYNRLKKCKNVRKPVNTISHFSSANIQEPYLFDFTQLQLDRFKKFI 184

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARII 243
               G + S+ASSSGIL  P+ H +  R GI +YG + K  ++     +   +  ++++I
Sbjct: 185 IDKNG-KNSIASSSGILFWPSSHLRWVRAGIIMYGISPKFGRNGREFGLIPAMKLKSKLI 243

Query: 244 LIRKALAGELVSYGGQK-KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
            +R+   G+ + YG       + + I + +IGY DGY    S                 I
Sbjct: 244 SVRQFKPGQTLGYGQNWINNRKKTYIGIVSIGYGDGYHSCDS-----------KNSWVLI 292

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP-DIKLDDVALASGTTN-YDLLVR 360
            G  VP++G I MDM   D+ + L  +VGD + I+G     +++       +  Y  + +
Sbjct: 293 NGRRVPVIGSILMDMIFVDLGEHLCDKVGDEVIIWGEKKFPIEEAFKGHDVSCLYRSVSQ 352

Query: 361 IGTRYAKFY 369
           + +R  + Y
Sbjct: 353 LTSRVKRKY 361


>gi|260769245|ref|ZP_05878178.1| alanine racemase [Vibrio furnissii CIP 102972]
 gi|260614583|gb|EEX39769.1| alanine racemase [Vibrio furnissii CIP 102972]
          Length = 409

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 72/377 (19%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I+LT  ++N       ++ + +  AV+K NAYG G + + P +    +    + S 
Sbjct: 45  AWLEINLTQFRDNIEQFKSKMNNHTKICAVMKANAYGNGIQGLMPTILEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPY 124
            E   +R    +  +  +     G+ K     N+  +I S  Q     +     G     
Sbjct: 105 AEAQAVRDSGFKGELMRVRSASLGEIKDAMHLNVEELIGSAEQAKALSALAKKAGHDIKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++       +      K  ++  I++H    D        +  N+
Sbjct: 165 HLALNDGGMGRNGIDMTTDAGKKESLQIAAAKGVRIVGIMTHFPSYDADEVRQKLASFNT 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + + I   +A+S   L  P     + RPG  LYG      +     ++V
Sbjct: 225 HSAWLIKEAKLNREDILLHVANSFTALNVPEAQLDMVRPGGVLYGDQPTNPE---YPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y       +DSL+A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSTFTTQQDSLMANIPVGYSDGYPRKMGN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----GPDIKLDDVALASGT 352
             +  I G    ++G  +M+ TM D+T    ++ G  + +F    G  I   ++   +  
Sbjct: 331 KAQVIINGQRANVVGVASMNTTMVDVTHIKGVKAGSEVVLFGHSQGETISASEMENNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    G+   + Y
Sbjct: 391 IFPELYTLWGSANPRVY 407


>gi|262037799|ref|ZP_06011241.1| alanine racemase [Leptotrichia goodfellowii F0264]
 gi|261748271|gb|EEY35668.1| alanine racemase [Leptotrichia goodfellowii F0264]
          Length = 374

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 90/380 (23%), Positives = 160/380 (42%), Gaps = 33/380 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            ++L+I+   ++ N   + +++ N     V+KDNAYGL  + I P L       F V  +
Sbjct: 2   LIKLEINRKNIEKNLEKIKSINKN--IICVLKDNAYGLEIKNILPILIENDCFYFAVAYI 59

Query: 66  EEGVKLRL--------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
            E ++++            + +I  L  I   + K     ++   I +  QL  Y    +
Sbjct: 60  GEALEIKKIIQKKYPDKADKIKIMTLNYIEEKEIKKTVKNDIELTIFNFEQLESYINASA 119

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            G      ++++TG NRLG +  E    T         ++  + SH++ A++        
Sbjct: 120 KGKKLKIHIKLNTGMNRLGFNENEIDKLTEILRGNPNLEIISVFSHISHAEN--KKETEE 177

Query: 178 QLERFRTLI-----SHYKGIEASLASSSGILLGPN-YHFQLTRPGISLYGGTDKINKSHP 231
           Q+ ++  ++     +  K     + +S  +      Y++   R G+++YG    + +   
Sbjct: 178 QIIKYDKMMSVFDKNSIKYKFKHIQASPLLFKYKEKYNYDFVRTGMAIYGMEP-LKEKVG 236

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           +   V   ++II IRK   GE VSYG  + L +D  IA+  +GYA G    +        
Sbjct: 237 LYNTVKLSSKIINIRKVKKGESVSYGNGEPLEKDGKIAIIPVGYAHGLQKQIENK----- 291

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                     IKG    ILG+I MDM + DITD     +G    I G     +I L  +A
Sbjct: 292 -----NAYVLIKGKRSYILGEICMDMIITDITDIEDAVIGSEAVIIGKQGSEEISLSKMA 346

Query: 348 LASGTTNYDLLVRIGTRYAK 367
             +GT   D+L +   +  +
Sbjct: 347 EWTGTIQDDVLTKWERKIKR 366


>gi|260772889|ref|ZP_05881805.1| alanine racemase [Vibrio metschnikovii CIP 69.14]
 gi|260612028|gb|EEX37231.1| alanine racemase [Vibrio metschnikovii CIP 69.14]
          Length = 407

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/382 (20%), Positives = 148/382 (38%), Gaps = 28/382 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            +     L+I+L   K N     +    +++  AV+K +AYG G   + P +   G+   
Sbjct: 38  IAQSNAWLEINLGQFKTNIEQFKSHINPSSKICAVMKADAYGNGIRGLMPTVIEQGIPCV 97

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCG 119
            +TS  E   +R    Q ++  +      +   + + N+  +I +  Q    ++     G
Sbjct: 98  AITSNAEARAVRESGFQGQLMRVRSATINEIAAVAELNIEELIGTKQQAMDLAQLGQRLG 157

Query: 120 VSHPYALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA--CADDPS--- 171
                 L ++    G N + +S ++      +   +K  Q+  I++H      DD     
Sbjct: 158 TPIKAHLALNDGGMGRNGVDMSHEKGKQEALSITQQKGLQIVGIMTHFPNYNPDDIRAKL 217

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
           +  N              + ++  +A+S   L  P     + RPG  LYG      +  P
Sbjct: 218 ATFNQHANWLVEQGPLKREEVQFHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPEYLP 277

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
              +V+ + RI  +     G+ V Y        D+++A   +GY+DGYP  +        
Sbjct: 278 ---IVSFKTRIASLHHLPTGKTVGYDSTHITDSDTVLANLPVGYSDGYPRKMGN------ 328

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVA 347
                  +  I G    ++G  +M+ TM D++    ++ G  + +FG      I +DD+ 
Sbjct: 329 -----KAQVLINGQWANVVGVTSMNTTMVDVSTIKGVKPGQEVVLFGAQGKKQISVDDIE 383

Query: 348 LASGTTNYDLLVRIGTRYAKFY 369
             S     +L    GT   +FY
Sbjct: 384 THSDIIFPELYTIWGTANPRFY 405


>gi|167033190|ref|YP_001668421.1| alanine racemase [Pseudomonas putida GB-1]
 gi|166859678|gb|ABY98085.1| alanine racemase [Pseudomonas putida GB-1]
          Length = 409

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 72/362 (19%), Positives = 142/362 (39%), Gaps = 27/362 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    +++  +AL++N  ++ A L+G ++  AV+K +AYG G   + P++   GV    V
Sbjct: 41  NSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAV 100

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIP-VISSVPQLTFYSKLMSCGVS 121
            S EE   +R      ++  +      + +     ++   V S+       +     G +
Sbjct: 101 ASNEEARVVRASGFTGQLVRVRLASLSELEDALQYDMEELVGSAEFARQVDAIAARHGKT 160

Query: 122 HPYALQVDT-GFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSS---H 173
               + +++ G +R G+ +                       +    +   DD       
Sbjct: 161 LRIHMALNSSGMSRNGVEMGSWSGRGEALQITDQKHLELVALMTHFAVEDKDDVRKGLAA 220

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N       +        +    A+S   L  P     + R G +L+G  D + +    +
Sbjct: 221 FNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFG--DTVPERTEYK 278

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  ++ +  +    AG  V Y     LTRDS +A   +GY+DGY    +         
Sbjct: 279 RAMQFKSHVAAVHSYPAGNTVGYDRTFTLTRDSRLANITVGYSDGYRRVFTN-------- 330

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   I G+ VP++GK++M+  M D+TD   ++ G+ + +FG     +I   ++   
Sbjct: 331 ---KGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEI 387

Query: 350 SG 351
           +G
Sbjct: 388 NG 389


>gi|262395354|ref|YP_003287207.1| alanine racemase [Vibrio sp. Ex25]
 gi|262338948|gb|ACY52742.1| alanine racemase [Vibrio sp. Ex25]
          Length = 409

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 74/377 (19%), Positives = 137/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I+L   ++N     +   G  +  AV+K +AYG G   + P +    +    V S 
Sbjct: 45  AWLEINLGQFRDNIEQFKSHMDGKTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
            E   +R    + ++  +     G+ +   D N+  +I +  Q    SKL          
Sbjct: 105 AEAQTVRDSGFKGQLMRVRSADIGEIEAAIDLNIEELIGTAEQAKALSKLAEKADKEIKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC--ADDPS---SHVNS 176
            L ++    G N + ++ +           +    +  I++H     AD+     S    
Sbjct: 165 HLALNDGGMGRNGVDMTTKAGKKEALEIAQQDGVNIVGIMTHFPNYNADEVRQKLSSFKD 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +      + I   +A+S   L        + RPG  LYG      +     ++V
Sbjct: 225 SSAWLIKEAGLKREDILLHVANSYTALNVSEAQLDMVRPGGVLYGDLPTNPE---YPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y    K +++SL+A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASVHHLPKNSTVGYDSSYKTSKESLMANIPVGYSDGYPRKMGNT---------- 331

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I G    + G  +M+ TM DIT    +E G  + +FG      I   ++   +  
Sbjct: 332 -AEVLINGQRAKVAGVASMNTTMVDITGIKDVEPGSEVVLFGSQQGKTISAAEMEKHAEV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    G    + Y
Sbjct: 391 IFPELYTVWGAANPRVY 407


>gi|148547263|ref|YP_001267365.1| alanine racemase [Pseudomonas putida F1]
 gi|148511321|gb|ABQ78181.1| alanine racemase [Pseudomonas putida F1]
          Length = 409

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 140/362 (38%), Gaps = 27/362 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    +++  +AL++N  ++ A L+G ++  AV+K +AYG G   + P++   GV    V
Sbjct: 41  NSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAV 100

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVS 121
            S EE   +R      ++  +      + +     ++  ++ S        +     G +
Sbjct: 101 ASNEEARVVRASGFTGQLVRVRLASLSELEDGLQYDMEELVGSAEFARQADAIAARHGKT 160

Query: 122 HPYALQVDT-GFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSS---H 173
               + +++ G +R G+ +                       +    +   DD       
Sbjct: 161 LRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAA 220

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N       +        +    A+S   L  P     + R G +L+G  D +      +
Sbjct: 221 FNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFG--DTVPARTEYK 278

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  ++ +  +    AG  V Y     L RDS +A   +GY+DGY    +         
Sbjct: 279 RAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTN-------- 330

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   I G+ VP++GK++M+  M D+TD   ++ G+ + +FG     +I   ++   
Sbjct: 331 ---KGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEI 387

Query: 350 SG 351
           +G
Sbjct: 388 NG 389


>gi|223939404|ref|ZP_03631282.1| alanine racemase [bacterium Ellin514]
 gi|223891896|gb|EEF58379.1| alanine racemase [bacterium Ellin514]
          Length = 400

 Score =  205 bits (522), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 86/364 (23%), Positives = 142/364 (39%), Gaps = 27/364 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    L+I   A ++N   M  L   N +  AV+K +AYG G   + PA+  A +    V
Sbjct: 32  NAHAWLEISQPAFEHNLAEMKKLVGPNTQVCAVMKADAYGHGIAMLIPAISRAAIPYVGV 91

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVS 121
           TS EE  K R    + ++  L    P + +     ++  ++ S+      S L     + 
Sbjct: 92  TSNEEAAKARAAGYKGKLMRLRTATPAEIEAALPYDIEELLGSLTLAEDVSVLAHRHHII 151

Query: 122 HPYALQVDT-GFNRLGL-------SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             Y L +++ G +R G+                  +           +  +A      + 
Sbjct: 152 LRYHLALNSAGMSRNGIELKADAGKADALALLRLPNLRIVGIMTHFPVEEVADVRAGLAA 211

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N+               +    A+S   L  P     L RPG +LYG  D +      Q
Sbjct: 212 FNTESAWVIHEGHLDRSKLLLHTANSFATLEVPEARLDLVRPGGALYG--DTVPSHTEYQ 269

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++ ++R+  I     G  + Y     LTRDS +A   +GY+DGY    S         
Sbjct: 270 RVLSFKSRVAAINAYPKGNTICYDRTFTLTRDSRLANIPVGYSDGYRRVFSN-------- 321

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
                   I G+  PI+G++TM+  M D+TD   ++ GD + +FG     +I   ++   
Sbjct: 322 ---KANVLIHGHRCPIVGRVTMNTVMVDVTDLADVQKGDEVVLFGKQGAAEITQTELEDI 378

Query: 350 SGTT 353
           SGT 
Sbjct: 379 SGTI 382


>gi|256828239|ref|YP_003156967.1| alanine racemase [Desulfomicrobium baculatum DSM 4028]
 gi|256577415|gb|ACU88551.1| alanine racemase [Desulfomicrobium baculatum DSM 4028]
          Length = 374

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 108/381 (28%), Positives = 163/381 (42%), Gaps = 30/381 (7%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +R +I L AL +N+  +   + N   A V+K +AYG G  + A AL+ AG +     +
Sbjct: 6   NHVRTRIRLKALVDNYRLIRTRATNP--APVIKSDAYGHGLPEAAAALFAAGARTMAAGT 63

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI--PVISSVPQLTFYSKLMSCGVSH 122
           V E   L+   P+  +  L G     +        I   V S+   L         G + 
Sbjct: 64  VGEAAVLKDTVPEVEVISLLGPLDTADYACVCERDIVAFVGSTEQLLLLEEAARLAGTTV 123

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLER 181
             AL+ DTG  RLG ++ EA          +  + ++  SHLA ADDP  +     Q  R
Sbjct: 124 RVALKFDTGMARLGFAVDEAAGVADTLDGLEHVRATMACSHLATADDPGQAEYAQEQGGR 183

Query: 182 FRTLISHYK----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-----KSHPM 232
           F  ++         + ASLA+S  I   P  H  L RPGI+LYG           K H +
Sbjct: 184 FARILKALHARGLDVRASLANSGAIFGHPALHHDLQRPGIALYGANPFHGTPWEAKGHGL 243

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q  +   +R++ IR   AG+ VSYG       +  I + A+GYAD Y   LS        
Sbjct: 244 QPAMQVSSRLVQIRTIPAGQSVSYGRTFTAPAEMRIGIVAVGYADNYSRGLS-------- 295

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                 +  I G  VP+LG++ M +T  D++       GD I + G      I  +++A 
Sbjct: 296 ---AKAQMLIHGKRVPVLGRVCMQLTAVDLSHVPEAAAGDEIFMLGGAGPAAISAEELAG 352

Query: 349 ASGTTNYDLLVRIGTRYAKFY 369
             GT  Y++   +G    + Y
Sbjct: 353 WWGTITYEVFCLLGQ-NPREY 372


>gi|218459378|ref|ZP_03499469.1| alanine racemase protein [Rhizobium etli Kim 5]
          Length = 255

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 120/249 (48%), Positives = 167/249 (67%), Gaps = 2/249 (0%)

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           P AL VDTGFNRLGL + +A+    +          L++SHLAC DDP++ +N  QLE F
Sbjct: 3   PCALHVDTGFNRLGLHIDDAIALADDVSRPASFAPVLVMSHLACGDDPTNAMNRQQLESF 62

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           R + + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG      ++PM+ V TAEARI
Sbjct: 63  RRVTAAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVCGMANPMRPVATAEARI 122

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I +R   AGE VSYG   +L RDS +A+ + GYADGY  + S        +V  GG+GFI
Sbjct: 123 IQVRTVGAGETVSYGRALQLPRDSRLAIVSAGYADGYMRSQSSGGVPLRQAVPQGGQGFI 182

Query: 303 KGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            G+ VP+ G+ITMD+T+FD+TD     +  GDY+++FG ++ LDDVA A+GT  Y++L  
Sbjct: 183 AGHKVPVAGRITMDLTIFDVTDLPENAVRAGDYVELFGKNMPLDDVARAAGTIGYEILTS 242

Query: 361 IGTRYAKFY 369
           +G R+ + Y
Sbjct: 243 MGLRHERRY 251


>gi|26990430|ref|NP_745855.1| alanine racemase [Pseudomonas putida KT2440]
 gi|24985399|gb|AAN69319.1|AE016569_3 alanine racemase, putative [Pseudomonas putida KT2440]
          Length = 409

 Score =  205 bits (522), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 140/362 (38%), Gaps = 27/362 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    +++  +AL++N  ++ A L+G ++  AV+K +AYG G   + P++   GV    V
Sbjct: 41  NSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAV 100

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVS 121
            S EE   +R      ++  +      + +     ++  ++ S        +     G +
Sbjct: 101 ASNEEARVVRASGFTGQLVRVRLASLSELEDGLQYDMEELVGSAEFARQADAIAARHGKT 160

Query: 122 HPYALQVDT-GFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSS---H 173
               + +++ G +R G+ +                       +    +   DD       
Sbjct: 161 LRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAA 220

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N       +        +    A+S   L  P     + R G +L+G  D +      +
Sbjct: 221 FNEQTDWLIKHARLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFG--DTVPARTEYK 278

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  ++ +  +    AG  V Y     L RDS +A   +GY+DGY    +         
Sbjct: 279 RAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTN-------- 330

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   I G+ VP++GK++M+  M D+TD   ++ G+ + +FG     +I   ++   
Sbjct: 331 ---KGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEI 387

Query: 350 SG 351
           +G
Sbjct: 388 NG 389


>gi|309775769|ref|ZP_07670764.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916446|gb|EFP62191.1| alanine racemase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 379

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/389 (22%), Positives = 157/389 (40%), Gaps = 33/389 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M  N    ++I    ++ N   +   LS   +  AVVK NAYG G E    A+ +     
Sbjct: 1   MMENSRTYVEIHTAYIRENVIHLKQNLSPKTKFMAVVKGNAYGHGIEPCVHAIDDL-CDW 59

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-NLIPVISSVPQLTFYSKLMSC 118
           +   +++E +++R  + +  I V   +   + K        +  +S+       +  +  
Sbjct: 60  YATATMQEAIRVRAVSREKPILVFGYVTDEEIKQAAAYAITLSAVSTAFLQHISAVCVQQ 119

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSF----NKKLGQLSLIISHLACAD---DPS 171
            +     L++DTGF+RLG+S  E                   ++ I +HL  A    +  
Sbjct: 120 RLQVAVHLKLDTGFHRLGISCCENSSECMEELLPLYALPNIHITGIYTHLVFAGSIQEQE 179

Query: 172 SHVNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
                +Q  RF+  I+  + +        + +S   +  P  H  + R G  ++G     
Sbjct: 180 QAFTQLQYRRFKNCIAALRKLGIDPGICHICNSKAAVHHPQLHMDMVRVGAYMFGLASAQ 239

Query: 227 NKSH-PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
            +   P++  +  +AR++L+R+  AGE V YG      + + IAV A G+ADGY   +  
Sbjct: 240 EQELIPLKEALLWKARVVLLREIKAGEGVGYGHDFIAEKPTRIAVLAAGFADGYRRCI-- 297

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                  +        + G   P++GK+ MDM M D+T    +  G+Y  + G     D 
Sbjct: 298 -------AQSPQSYVLLHGKRAPLVGKVCMDMFMVDVTAIQGLHTGEYAVLCG-QADRDA 349

Query: 346 VALAS------GTTNYDLLVRIGTRYAKF 368
           V+         GT   ++ V I  R  + 
Sbjct: 350 VSSYLLGKIIQGTAG-EITVGITERVNRH 377


>gi|73763191|gb|AAZ83975.1| alanine racemase [Pseudomonas putida]
          Length = 409

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/362 (20%), Positives = 140/362 (38%), Gaps = 27/362 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    ++I   AL++N  ++ A L G ++  AV+K +AYG G   + P++   GV    V
Sbjct: 41  NSNAWVEISAGALQHNIRTLQAELGGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAV 100

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVS 121
            S EE   +R      ++  +     G+ +     ++  ++ S        +     G +
Sbjct: 101 ASNEEARVVRASGFTGQLVRVRLASLGEVEDALQYDMEELVGSAEFARQLDAIAERHGKT 160

Query: 122 HPYALQVDT-GFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSS---H 173
               + +++ G +R G+ +                       +    +   DD       
Sbjct: 161 LRIHMALNSSGMSRNGVEMTTWSGRGEALQITDQKHLQLVALMTHFAVEDKDDVRKGLAA 220

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N       +        +    A+S   L  P  H  + R G +L+G T         Q
Sbjct: 221 FNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEAHLDMVRTGGALFGDTVPTRTE--YQ 278

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  ++ +  +    AG  V Y     L RDS +A   +GY+DGY    +         
Sbjct: 279 RVMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTN-------- 330

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   I G+ VP++GK++M+  M D+TD   ++ G+ + +FG     +I   ++   
Sbjct: 331 ---KGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGREITQAEIEEI 387

Query: 350 SG 351
           +G
Sbjct: 388 NG 389


>gi|260901465|ref|ZP_05909860.1| alanine racemase [Vibrio parahaemolyticus AQ4037]
 gi|308107691|gb|EFO45231.1| alanine racemase [Vibrio parahaemolyticus AQ4037]
          Length = 409

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL   K N     +   +  +  AV+K +AYG G   + P +    +    + S 
Sbjct: 45  TWLEIDLGQFKQNIEQFKSHMNDQTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E   +R    + ++  +     G+ +   D N+  +I ++ Q     +       +   
Sbjct: 105 AEAQVVRDSGFKGQLMRVRSAEIGEIEGALDLNVEELIGTLDQAKAIAALSKKTNKTVKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++ +           +   ++  I++H    +             
Sbjct: 165 HLALNDGGMGRNGIDMTTENGKKEALAIAKQSGVEIVGIMTHFPNYNAEEVRAKLGSFKE 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +      + I   +A+S   L  P     + RPG  LYG       +    ++V
Sbjct: 225 SSAWLIKEADLKRENILLHVANSYTALNVPEAQLDMVRPGGVLYGDLPT---NLEYPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y      T++S++A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSSFTTTKESVMANLPVGYSDGYPRKMGNTAD-------- 333

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++G  +M+ TM D++D   ++ G  + +FG      I   ++   +  
Sbjct: 334 ---VLINGQRAKVVGVTSMNTTMIDVSDIKGVKPGSEVVLFGNQKSQTINAAEIEKNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   + Y
Sbjct: 391 IFPELYTIWGTSNPRVY 407


>gi|124009567|ref|ZP_01694241.1| alanine racemase [Microscilla marina ATCC 23134]
 gi|123984806|gb|EAY24781.1| alanine racemase [Microscilla marina ATCC 23134]
          Length = 383

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/384 (21%), Positives = 149/384 (38%), Gaps = 36/384 (9%)

Query: 9   LKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++  +AL+ N + +  L+G   R ++V+K NAYG G +   P    AGV+ F V S +E
Sbjct: 7   IELSQSALQKNINFIKTLAGDGVRMSSVIKGNAYGHGIDLFVPMAEKAGVRHFSVFSADE 66

Query: 68  GVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVSHPYA 125
            +++          ++ G  H  +     + N+   I  +    T               
Sbjct: 67  ALQVVQSQQHGSKVMIMGHIHNEELLWAIENNVELFIFDLGRLETSLQLAAKNKAQVRIH 126

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV--QLERFR 183
           L ++TG NRLGL   E L                 +       +  ++   V  Q+  ++
Sbjct: 127 LHLETGMNRLGLEEDELLKAIDLLKKYPDCFHLEGVCTHYAGAESIANYARVKSQIHEYK 186

Query: 184 TLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTD-----------KIN 227
                     I      ++     +  P     + R GI  YG              K +
Sbjct: 187 RRTRLLSRHEISPKYQHTACSAALVSYPQTRMDMVRVGILQYGFFPTQETLIQYLKNKED 246

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           K+ P+  V+  ++RI+  ++   GE V YG       DS IAV  +GYA GY   LS   
Sbjct: 247 KTDPLARVLNWKSRIMSTKEVSTGEFVGYGTTYMAAADSRIAVVPVGYAQGYSRLLSNQ- 305

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                     G+  I G  + ++G + M++ + D+T++   + GD + + G      I +
Sbjct: 306 ----------GRVLICGKQLSVIGTVNMNLILVDLTEAPEAQPGDEVVLIGSQGDLSISV 355

Query: 344 DDVALASGTTNYDLLVRIGTRYAK 367
                 +   NY+LL R+     +
Sbjct: 356 ASFGEFTNQLNYELLTRLPMSIPR 379


>gi|153836908|ref|ZP_01989575.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
 gi|149749866|gb|EDM60611.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
          Length = 409

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL   K N     +  S   +  AV+K +AYG G   + P +    +    + S 
Sbjct: 45  TWLEIDLGQFKQNIEQFKSHMSDQTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E   +R    + ++  +     G+ +   D N+  +I ++ Q     +       +   
Sbjct: 105 AEAQVVRDSGFKGQLMRVRSAEIGEIEGALDLNVEELIGTLDQAKAIAALSKKANKTVKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++ +           +   ++  I++H    +             
Sbjct: 165 HLALNDGGMGRNGIDMTTENGKKEALAIAKQSGVEIVGIMTHFPNYNAEEVRAKLGSFKE 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +      + I   +A+S   L  P     + RPG  LYG       +    ++V
Sbjct: 225 SSAWLIKEANLKREDILLHVANSYTALNVPEAQLDMVRPGGVLYGDLPT---NLEYPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y      T++S++A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSSFTTTKESVMANLPVGYSDGYPRKMGNTAD-------- 333

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++G  +M+ TM D++D   ++ G  + +FG      I   ++   +  
Sbjct: 334 ---VLINGQRAKVVGVTSMNTTMIDVSDIKGVKPGSEVVLFGNQKSQTINAAEIEKNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   + Y
Sbjct: 391 IFPELYTIWGTSNPRVY 407


>gi|153830040|ref|ZP_01982707.1| putative alanine racemase [Vibrio cholerae 623-39]
 gi|148874480|gb|EDL72615.1| putative alanine racemase [Vibrio cholerae 623-39]
          Length = 428

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANMPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|258621589|ref|ZP_05716622.1| Alanine racemase [Vibrio mimicus VM573]
 gi|258586207|gb|EEW10923.1| Alanine racemase [Vibrio mimicus VM573]
          Length = 407

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 140/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + + +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMNSDTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E   +R    +  +  +     G+   + D N+  +I +  Q +         G +    
Sbjct: 104 EARAVRESGFKGELIRVRSASLGEMSAVLDLNIEELIGTHQQAMELAELAKKNGKTVKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           + ++    G N + ++ +       +   +    +  I++H    D        +     
Sbjct: 164 MALNDGGMGRNGIDMTTEAGKKEAISIATQPSLSIVGIMTHFPNYDADEVRTKLASFKQH 223

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                       + I   +A+S   L  P     + RPG  LYG      +     ++V+
Sbjct: 224 SAWLMEQANLKREDITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  + +   G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVASLHQLPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ TM D+TD   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVVGVTSMNTTMVDVTDIKGVLPGQEVALFGQQKNQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G    +FY
Sbjct: 390 FPELYTVWGNSNPRFY 405


>gi|28900856|ref|NP_800511.1| alanine racemase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362532|ref|ZP_05775452.1| alanine racemase [Vibrio parahaemolyticus K5030]
 gi|260879223|ref|ZP_05891578.1| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|260896758|ref|ZP_05905254.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|34098472|sp|Q87HG4|ALR2_VIBPA RecName: Full=Alanine racemase 2
 gi|28809302|dbj|BAC62344.1| putative alanine racemase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308087318|gb|EFO37013.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|308094088|gb|EFO43783.1| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|308115278|gb|EFO52818.1| alanine racemase [Vibrio parahaemolyticus K5030]
          Length = 409

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL   K N     +   +  +  AV+K +AYG G   + P +    +    + S 
Sbjct: 45  TWLEIDLGQFKQNIEQFKSHMNDQTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E   +R    + ++  +     G+ +   D N+  +I ++ Q     +       +   
Sbjct: 105 AEAQVVRDSGFKGQLMRVRSAEIGEIEGALDLNVEELIGTLDQAKAIAALSKKANKTVKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++ +           +   ++  I++H    +             
Sbjct: 165 HLALNDGGMGRNGIDMTTENGKKEALAIAKQSGVEIVGIMTHFPNYNAEEVRAKLGSFKE 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +      + I   +A+S   L  P     + RPG  LYG       +    ++V
Sbjct: 225 SSAWLIKEANLKREDILLHVANSYTALNVPEAQLDMVRPGGVLYGDLPT---NLEYPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y      T++S++A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSSFTTTKESVMANLPVGYSDGYPRKMGNTAD-------- 333

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++G  +M+ TM D++D   ++ G  + +FG      I   ++   +  
Sbjct: 334 ---VLINGQRAKVVGVTSMNTTMIDVSDIKGVKPGSEVVLFGNQKSQTINAAEIEKNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   + Y
Sbjct: 391 IFPELYTIWGTSNPRVY 407


>gi|258627600|ref|ZP_05722377.1| Alanine racemase [Vibrio mimicus VM603]
 gi|258580182|gb|EEW05154.1| Alanine racemase [Vibrio mimicus VM603]
          Length = 407

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 140/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + + +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMNSDTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E   +R    +  +  +     G+   + D N+  +I +  Q +         G +    
Sbjct: 104 EARAVRESGFKGELIRVRSASLGEMSAVLDLNIEELIGTHQQAMELAELAKKNGKTVKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           + ++    G N + ++ +       +   +    +  I++H    D        +     
Sbjct: 164 MALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSIVGIMTHFPNYDADEVRTKLASFKQH 223

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                       + I   +A+S   L  P     + RPG  LYG      +     ++V+
Sbjct: 224 SAWLMEQANLKREDITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  + +   G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVASLHQLPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ TM D+TD   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVVGVTSMNTTMVDVTDIKGVLPGQEVALFGQQKNQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G    +FY
Sbjct: 390 FPELYTVWGNSNPRFY 405


>gi|313498322|gb|ADR59688.1| Alr [Pseudomonas putida BIRD-1]
          Length = 380

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/362 (19%), Positives = 140/362 (38%), Gaps = 27/362 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           N    +++  +AL++N  ++ A L+G ++  AV+K +AYG G   + P++   GV    V
Sbjct: 12  NSNAWVEVSASALQHNIRTLQAELAGKSKLCAVLKADAYGHGIGLVMPSIIAQGVPCVAV 71

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVS 121
            S EE   +R      ++  +      + +     ++  ++ S        +     G +
Sbjct: 72  ASNEEARVVRASGFTGQLVRVRLASLSELEDGLQYDMEELVGSAEFARQADAIAARHGKT 131

Query: 122 HPYALQVDT-GFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSS---H 173
               + +++ G +R G+ +                       +    +   DD       
Sbjct: 132 LRIHMALNSSGMSRNGVEMATWSGRGEALQITDQKHLKLVALMTHFAVEDKDDVRKGLAA 191

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
            N       +        +    A+S   L  P     + R G +L+G  D +      +
Sbjct: 192 FNEQTDWLIKHAKLDRSKLTLHAANSFATLEVPEARLDMVRTGGALFG--DTVPGRTEYK 249

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +  ++ +  +    AG  V Y     L RDS +A   +GY+DGY    +         
Sbjct: 250 RAMQFKSHVAAVHSYPAGNTVGYDRTFTLARDSRLANITVGYSDGYRRVFTN-------- 301

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALA 349
               G   I G+ VP++GK++M+  M D+TD   ++ G+ + +FG     +I   ++   
Sbjct: 302 ---KGHVLINGHRVPVVGKVSMNTLMVDVTDFPDVKGGNEVVLFGKQAGGEITQAEMEEI 358

Query: 350 SG 351
           +G
Sbjct: 359 NG 360


>gi|332300540|ref|YP_004442461.1| Alanine racemase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177603|gb|AEE13293.1| Alanine racemase [Porphyromonas asaccharolytica DSM 20707]
          Length = 835

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 161/376 (42%), Gaps = 25/376 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL AL +N  S  AL  +  R   + K   YG+G  ++A AL    +    V   
Sbjct: 469 TTLEIDLEALVSNLKSYKALLPSETRIIVMAKAQGYGIGAYELAKALEQQDLAALAVALA 528

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PY 124
           +EG +LR       I V+       E +        + +      F   +   G+SH P 
Sbjct: 529 DEGKELRSKGILLPIIVMNPEVEAFEVMTQSRLEPEIYNERILREFARHVERQGLSHYPV 588

Query: 125 ALQVDTGFNRLGLSLQ-EALDFTHNSFN--KKLGQLSLIISHLACADDP-SSHVNSVQLE 180
            +++DTG +R G +   E L+    + +  + L ++  I +HLA AD+P  S     Q  
Sbjct: 589 HIELDTGMHRTGFTPDRETLEHLAQTLHEVEPLIRVQSIFTHLAAADEPTMSDFTEQQFA 648

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            +     +            + +++GI    ++H+ + R G+ LYG +   + +      
Sbjct: 649 LYDEGADYLTSQLSYRPLRHVQNTAGIERYNHHHYDMARLGVGLYGISATGSLTLEPVAK 708

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ I+    GE + YG + ++     I +  IGYADGY    S           
Sbjct: 709 LR--TTLLQIKTIPDGETIGYGRRGQVAPGGQIGIIPIGYADGYDRRFSCGV-------- 758

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFG-PDIKLDDVALASGTT 353
             G   I   + PI+G + MD  M D++     +  GD + IFG P +++ D+A   GT 
Sbjct: 759 --GSVMIHDTLCPIVGNVCMDTCMVDLSPLQGKVAEGDEVIIFGVPGLQVSDLAERIGTI 816

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+++ ++  R  + Y
Sbjct: 817 PYEVISKLSPRIKRTY 832


>gi|313886643|ref|ZP_07820354.1| alanine racemase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923885|gb|EFR34683.1| alanine racemase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 835

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 92/376 (24%), Positives = 161/376 (42%), Gaps = 25/376 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+IDL AL +N  S  AL  +  R   + K   YG+G  ++A AL    +    V   
Sbjct: 469 TTLEIDLEALVSNLKSYKALLPSETRIIVMAKAQGYGIGAYELAKALEQQDLAALAVALA 528

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PY 124
           +EG +LR       I V+       E +        + +      F   +   G+SH P 
Sbjct: 529 DEGKELRSKGILLPIIVMNPEVEAFEVMTQSRLEPEIYNERILREFARHVERQGLSHYPV 588

Query: 125 ALQVDTGFNRLGLSLQ-EALDFTHNSFN--KKLGQLSLIISHLACADDP-SSHVNSVQLE 180
            +++DTG +R G +   E L+    + +  + L ++  I +HLA AD+P  S     Q  
Sbjct: 589 HIELDTGMHRTGFTPDRETLEHLAQTLHEVEPLIRVQSIFTHLAAADEPTMSDFTEQQFA 648

Query: 181 RFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
            +     +            + +++GI    ++H+ + R G+ LYG +   + +      
Sbjct: 649 LYDEGADYLTSQLSYRPLRHVQNTAGIERYNHHHYDMARLGVGLYGISATGSLTLEPVAK 708

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +     ++ I+    GE + YG + ++     I +  IGYADGY    S           
Sbjct: 709 LR--TTLLQIKTIPDGETIGYGRRGQVAPGGQIGIIPIGYADGYDRRFSCGV-------- 758

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFG-PDIKLDDVALASGTT 353
             G   I   + PI+G + MD  M D++     +  GD + IFG P +++ D+A   GT 
Sbjct: 759 --GSVMIHDTLCPIVGNVCMDTCMVDLSPLQGKVAEGDEVIIFGVPGLQVSDLAERIGTI 816

Query: 354 NYDLLVRIGTRYAKFY 369
            Y+++ ++  R  + Y
Sbjct: 817 PYEVISKLSPRIKRTY 832


>gi|262171654|ref|ZP_06039332.1| alanine racemase [Vibrio mimicus MB-451]
 gi|261892730|gb|EEY38716.1| alanine racemase [Vibrio mimicus MB-451]
          Length = 407

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 141/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + + +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMNSDTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E   +R    +  +  +     G+   + D N+  +I +  Q +         G +    
Sbjct: 104 EARAVRENGFKGELIRVRSASLGEMSAVLDLNIEELIGTHQQAMELAELAKKNGKTVKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           + ++    G N + ++ +       +   +    +  I++H    D        ++    
Sbjct: 164 MALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSIVGIMTHFPNYDADEVRTKLANFKQH 223

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                       + I   +A+S   L  P     + RPG  LYG      +     ++V+
Sbjct: 224 SAWLMEQANLKREDITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  + +   G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVASLHQLPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ TM D+TD   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVVGVTSMNTTMVDVTDIKGVLPGQEVALFGQQKNQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G    +FY
Sbjct: 390 FPELYTVWGNSNPRFY 405


>gi|229529606|ref|ZP_04418996.1| alanine racemase [Vibrio cholerae 12129(1)]
 gi|229333380|gb|EEN98866.1| alanine racemase [Vibrio cholerae 12129(1)]
          Length = 428

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|262190944|ref|ZP_06049158.1| alanine racemase [Vibrio cholerae CT 5369-93]
 gi|262033181|gb|EEY51705.1| alanine racemase [Vibrio cholerae CT 5369-93]
          Length = 407

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 104 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQAFDLAELAKQSGKTIKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 164 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 223

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 224 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 390 FPELYTLWGTSNPRFY 405


>gi|256785780|ref|ZP_05524211.1| alanine racemase [Streptomyces lividans TK24]
 gi|289769672|ref|ZP_06529050.1| alanine racemase [Streptomyces lividans TK24]
 gi|289699871|gb|EFD67300.1| alanine racemase [Streptomyces lividans TK24]
          Length = 338

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 29/335 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R +IDL AL+ N  ++   +  A   AVVK +AYG G    A A   AG       + 
Sbjct: 15  RARAEIDLAALRANVRALRERAPGAALMAVVKADAYGHGAIPCARAAVAAGATWLGTATP 74

Query: 66  EEGVKLRLYTP----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           +E + LR   P      RI        G  +   +  L   +S++  +   +      GV
Sbjct: 75  QEALALRAAEPGLPDDVRIMCWLWTPGGPWREAVEARLDVSVSAMWAMEEVTGAARAAGV 134

Query: 121 SHPYALQVDTGFNRLGLSL----QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                L+ DTG  R G       +  +     +  + L +++ + SH ACAD+P     +
Sbjct: 135 PARVQLKADTGLGRGGCQPGADWERLVGAALRAEEEGLLRVTGLWSHFACADEPGHPSIA 194

Query: 177 VQLERFRTLI--SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
            QL RFR +   +  +G+      +A+S   L  P+ HF L RPGI++YG +        
Sbjct: 195 AQLTRFREMTAYAEQRGLRPEVRHIANSPATLTLPDAHFDLVRPGIAMYGVSPSPEIGTP 254

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               ++ V+T  A + L+++   G  VSYG       ++ + +  +GYADG P   S   
Sbjct: 255 ADFGLRPVMTLAASLALVKQVPGGHGVSYGHHYTTPGETTLGLVPLGYADGIPRHASSS- 313

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI 322
                     G   + G    + G+I MD  + D+
Sbjct: 314 ----------GPVLVDGKWRTVAGRIAMDQFVVDL 338


>gi|320334786|ref|YP_004171497.1| Alanine racemase [Deinococcus maricopensis DSM 21211]
 gi|319756075|gb|ADV67832.1| Alanine racemase [Deinococcus maricopensis DSM 21211]
          Length = 375

 Score =  203 bits (517), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 102/366 (27%), Positives = 161/366 (43%), Gaps = 26/366 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTS 64
             R  I    L  N  ++  +SG     A VK +AYG G   +A AL +   V  F V  
Sbjct: 25  RARADIHAGHLVRNARALAQVSG-TPLIAPVKADAYGHGVNLVARALEDEPSVWGFAVAM 83

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E   L   T +  + ++    P +   + D  +   +SS  ++               
Sbjct: 84  PREAAALAPLT-RKPVLLMTPAAPEEVGPLADLGVRLSVSSAEEVAAL------PAHARV 136

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG NRLG    EAL        + L +     +HLACADDP   ++  Q+  F  
Sbjct: 137 HLKVDTGMNRLGAKPPEALRLGAALEARGLLEGV--YTHLACADDPDLRMSEAQIHAFAA 194

Query: 185 LISHYKGIEASLASSSGIL-LGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEARI 242
           + + +    A   + +G+L LG      L RPG++LYG     +     ++  +   AR+
Sbjct: 195 VRAAFPAALAHAQNGAGVLALGRVPGLDLARPGLALYGYPPEHLRARAELRPAMRVTARV 254

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
             +    AGE VSYG   +   D+ +A    GYADGYP   +G             +  +
Sbjct: 255 GFVHTVPAGESVSYGALWRAPEDTRVATVQFGYADGYPRGATGR-----------ARAVV 303

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRI 361
           +G +  +LG+I MD  M D+   L + VG+++++FG D +   D+A  S    Y++L  I
Sbjct: 304 RGEVRDVLGRICMDQFMLDV-QGLDVRVGEWVEVFGWDVLSASDLAAWSDGIEYEVLTGI 362

Query: 362 GTRYAK 367
           G R  +
Sbjct: 363 GARVER 368


>gi|46200246|ref|YP_005913.1| alanine racemase [Thermus thermophilus HB27]
 gi|46197874|gb|AAS82286.1| alanine racemase [Thermus thermophilus HB27]
          Length = 361

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 32/372 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           E   +++DL AL  N+  +   +G      V+K +AYG G   +A  L   GV  F V +
Sbjct: 13  ERAWVEVDLAALWANYRLLAGRAGG-EVIPVLKADAYGHGALPLARFLEGKGVGRFAVAT 71

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           +EEG +LR    +  + +L  +HP + +   +  L+P +S++      S+     G+   
Sbjct: 72  LEEGRRLREGGIKGEVLLLGSLHPLEAEEALELGLVPTLSTLEAAEALSQRARALGLVPR 131

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+VDTG NR+G   +EA           +    +        +D  +     Q  RF+
Sbjct: 132 AHLKVDTGMNRVGFPWEEAASALRAVEALGVRVEGVYTHLATAGED--AAFVETQRRRFQ 189

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +             +S  LL         R G++LYG          ++ ++   AR  
Sbjct: 190 EVRRALGEGYFYHLENSLGLLRHGAT-AGVRVGLALYGLVP----GFGLRPILRILARPT 244

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
           L+++  AG+ V YGG         +A   +GYADG P              F+ G     
Sbjct: 245 LVKRLKAGDRVGYGGVYVARGGEWLATLPVGYADGLPWG---------AVRFVKGP---D 292

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQI------FGPDIKLDDVALASGTTNYDL 357
           G ++ + G+I+MD T   +       VG           FGP   L   A A GT  Y++
Sbjct: 293 GRLLEVAGRISMDQTTVLLPGP----VGLEAVFEVLSADFGPT-GLLAWAEARGTLPYEV 347

Query: 358 LVRIGTRYAKFY 369
            V +  R  + Y
Sbjct: 348 AVHLSRRLPRRY 359


>gi|229521424|ref|ZP_04410843.1| alanine racemase [Vibrio cholerae TM 11079-80]
 gi|229341522|gb|EEO06525.1| alanine racemase [Vibrio cholerae TM 11079-80]
          Length = 428

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 145/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHMPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G  V ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRVKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|153802661|ref|ZP_01957247.1| alanine racemase, putative [Vibrio cholerae MZO-3]
 gi|124121789|gb|EAY40532.1| alanine racemase, putative [Vibrio cholerae MZO-3]
          Length = 428

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRLSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVIPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|328470761|gb|EGF41672.1| alanine racemase [Vibrio parahaemolyticus 10329]
          Length = 409

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 67/377 (17%), Positives = 135/377 (35%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L++DL   K N     +  S   +  AV+K +AYG G   + P +    +    + S 
Sbjct: 45  TWLEVDLGQFKQNIEQFKSHMSDQTKICAVMKADAYGNGIAGLMPTIIEQQIPCVAIASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
            E   +R    + ++  +     G+ +   D N+  +I ++ Q     +       +   
Sbjct: 105 AEAQVVRDSGFKGQLMRVRSAEIGEIEGALDLNVEELIGTLDQAKAIAALSKKANKTVKV 164

Query: 125 ALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
            L ++    G N + ++ +           +   ++  I++H    +             
Sbjct: 165 HLALNDGGMGRNGIDMTTENGKKEALAIAKQSGVEIVGIMTHFPNYNAEEVRAKLGSFKE 224

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                        + I   +A+S   L  P     + RPG  LYG       +    ++V
Sbjct: 225 SSAWLIEKANLKREDILLHVANSYTALNVPEAQLDMVRPGGVLYGDLPT---NLEYPSIV 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +        V Y      T++S++A   +GY+DGYP  +             
Sbjct: 282 SFKTRVASLHHLPKNSTVGYDSSFTTTKESVMANLPVGYSDGYPRKMGNTAD-------- 333

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++G  +M+ TM D++D   ++ G  + +FG      I   ++   +  
Sbjct: 334 ---VLINGQRAKVVGVTSMNTTMIDVSDIKGVKPGSEVVLFGNQKSQTINAAEIEKNADV 390

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   + Y
Sbjct: 391 IFPELYTIWGTSNPRVY 407


>gi|229525903|ref|ZP_04415308.1| alanine racemase [Vibrio cholerae bv. albensis VL426]
 gi|229339484|gb|EEO04501.1| alanine racemase [Vibrio cholerae bv. albensis VL426]
          Length = 428

 Score =  202 bits (515), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARVVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|153827222|ref|ZP_01979889.1| alanine racemase, putative [Vibrio cholerae MZO-2]
 gi|149738872|gb|EDM53204.1| alanine racemase, putative [Vibrio cholerae MZO-2]
          Length = 428

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L++ L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEVSLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|260778604|ref|ZP_05887496.1| alanine racemase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604768|gb|EEX31063.1| alanine racemase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 405

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 73/378 (19%), Positives = 138/378 (36%), Gaps = 26/378 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
                L+I L   K N     + LS   +   V+K +AYG G   + P +    V    +
Sbjct: 40  QSNAWLEISLGQFKQNMALFRSHLSSQTKLCVVMKADAYGNGIRGLMPTILELNVPCIAI 99

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            S  E   +R    + ++  +      + +   D ++  +I S+ Q      L +     
Sbjct: 100 ASNAEARTVRDSGFEGQLVRVRSADIQEIEQAMDLDIEELIGSLEQANQIKSLSTDKTIK 159

Query: 123 PYALQVDTGFNRLGLSL--QEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVN 175
            +    D G +R G+ +  ++      +    +   +  I++H    D        +  N
Sbjct: 160 VHLALNDGGMSRNGIDMSTEKGKQEALDIAKHQGIDIVGIMTHFPNYDADEVRSKLADFN 219

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
                       +   +   +++S   L  P     + RPG  LYG      +     ++
Sbjct: 220 QSSAWLIENANLNRDDVLLHVSNSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSI 276

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           V+ + R+  +    A   V Y       RDS++A   +GY+DGYP  +            
Sbjct: 277 VSFKTRVASLHNVPANSTVGYDSSYVTKRDSVLANLPVGYSDGYPRKMGNR--------- 327

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
                 + G   P++GK +M+ TM D+TD   +  G  + +FG      I + ++   + 
Sbjct: 328 --AHVIVNGQRAPVVGKTSMNTTMVDVTDVKGVITGQEVTLFGQQANAQISVGEMEEHAE 385

Query: 352 TTNYDLLVRIGTRYAKFY 369
               +L    GT   + Y
Sbjct: 386 LIFPELYTVWGTANPRLY 403


>gi|332799232|ref|YP_004460731.1| alanine racemase [Tepidanaerobacter sp. Re1]
 gi|332696967|gb|AEE91424.1| Alanine racemase [Tepidanaerobacter sp. Re1]
          Length = 401

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/386 (20%), Positives = 140/386 (36%), Gaps = 39/386 (10%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +N    L +DL  +  N  ++    G  R   VVK NAYG G   +A     +G     V
Sbjct: 2   ANPTSWLYVDLNTISENIKTIKNYIGATRLLVVVKANAYGHGMYPVAACAVESGADYLGV 61

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           +S+EEG+ LR    +  + V   I P Q +   + +L   + S   +   +         
Sbjct: 62  SSLEEGIFLRKSGIKEPVLVFNTILPEQAEDALNYDLTVTVCSFDTVQALNDAAAKMNKK 121

Query: 122 HPYALQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
               +++DTG  R G+  +   E +     +F     +       LA  +  +    ++ 
Sbjct: 122 AFVHVKIDTGLGRFGVLPEHAVEMVHIITANFKNIYIEGIYTHFSLATNESITRKQFNIF 181

Query: 179 LERFRTLISHYKGIE-ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           L   + L      I    + +S+ +L     H  + R G  +YG      K+  +     
Sbjct: 182 LSIIKELEHQGYKIPLKHVCNSTAMLNYAEMHLDMVRVGNLVYGLCPS--KNLKISNPSK 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS------------- 284
             ++II ++    G  V YG + K  R + +A+   GY DG  L +S             
Sbjct: 240 IYSKIIFLKTLPKGHYVGYGNRFKTRRHTTVAIVPFGYYDGLELFISQPNGIWDSLKNLI 299

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGPDIKL 343
                    +       + G    ILGKI+M   + D+TD    + +GD +++       
Sbjct: 300 KQILASFGVITANRTVKVNGIQCNILGKISMQSCIVDVTDIKDKVFIGDVVEL-----SA 354

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             +              +    A+ Y
Sbjct: 355 RRI-------------NLSHSIARVY 367


>gi|254286591|ref|ZP_04961547.1| alanine racemase, putative [Vibrio cholerae AM-19226]
 gi|150423349|gb|EDN15294.1| alanine racemase, putative [Vibrio cholerae AM-19226]
          Length = 428

 Score =  202 bits (514), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 144/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKGSTVGYDSTFTSSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|302388874|ref|YP_003824695.1| alanine racemase [Thermosediminibacter oceani DSM 16646]
 gi|302199502|gb|ADL07072.1| alanine racemase [Thermosediminibacter oceani DSM 16646]
          Length = 384

 Score =  202 bits (514), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 20/346 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++++L AL+ N+ ++    G     AVVK +AYG G + +A AL  AGV+ F V  +EE 
Sbjct: 8   MEVNLRALRQNYETIRREVG-VPVMAVVKGDAYGHGAKDVALALQEAGVEWFGVEFLEEA 66

Query: 69  VKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYAL 126
           V+LR    + RI  L G       +I  + ++IP I ++ +    +K     GVS    L
Sbjct: 67  VELREAGIKGRILCLTGPVTREDCEIFIEKDVIPTIYNLDRADLLNKTAARRGVSCRVHL 126

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG  R G   ++         +          +H A A          QL  F+ ++
Sbjct: 127 KFDTGLGRFGFLYEDLDRVIDGLRSFSHLIYEGAYTHFAEAFAKKPDYTLYQLSVFQRVL 186

Query: 187 S--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                 GI+ ++  ++     +  P     + R G +LYG T   N S  ++ V   + +
Sbjct: 187 DKLEQSGIKVAIRHAANSVAAMDFPEARLDMVRIGSALYGITMFKNTSVRLERVARLKVK 246

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT-----------LSGLDSEH 290
           II ++    G  + YG   K  RD++I +  +GY +G  +            L  +  E 
Sbjct: 247 IIDVKSLPRGSYIGYGRTYKTQRDTVIGIIPVGYFEGLKVQRRNYAFTLVGLLRNIYHEI 306

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
              +      F+ G  +PILG+I M +T  D+T +    +GD + +
Sbjct: 307 KDFLNPVPLVFMDGKPLPILGRIGMQLTAIDLTGT-GAGIGDEVTV 351


>gi|262402336|ref|ZP_06078897.1| alanine racemase [Vibrio sp. RC586]
 gi|262351118|gb|EEZ00251.1| alanine racemase [Vibrio sp. RC586]
          Length = 407

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 71/376 (18%), Positives = 140/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + + +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMNSDTKICAIMKADAYGNGIRGLMPTIIAQGILCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q +         G +    
Sbjct: 104 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQAMELAELAKKNGKTVKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC--ADDPSSH---VNSV 177
           + ++    G N + ++ +       +   +    +  I++H     AD+  +        
Sbjct: 164 MALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLNIVGIMTHFPNYNADEVRAKLAKFKES 223

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                       + I   +A+S   L  P     + RPG  LYG      +     ++V+
Sbjct: 224 SAWLMEQANLKREDITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y       RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVASLHHVPKGTTVGYDSTFTTNRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ TM D+TD   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVIGVTSMNTTMVDVTDIKGVLPGQEVALFGQQQKQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 390 FPELYTLWGTSNPRFY 405


>gi|297578895|ref|ZP_06940823.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536489|gb|EFH75322.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 428

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 69/376 (18%), Positives = 143/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +     D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAALDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRLSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|294814274|ref|ZP_06772917.1| Alanine racemase [Streptomyces clavuligerus ATCC 27064]
 gi|294326873|gb|EFG08516.1| Alanine racemase [Streptomyces clavuligerus ATCC 27064]
          Length = 352

 Score =  202 bits (513), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 143/373 (38%), Gaps = 38/373 (10%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH +E   + +DL A+++N   +  +   A   AVVK NAYG G   +A A   AG +  
Sbjct: 1   MHRSE---ITLDLDAVRHNARQLIKMVDGAELWAVVKGNAYGHGAVPVAGAALEAGARAL 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V ++ EG+ LR   P+ARI VL  + PG         L  V      L   S       
Sbjct: 58  CVATLGEGLALRERFPRARIVVLGPVGPGSVPAASRAGLECVAHDDASLEALSG------ 111

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +  Y ++V+ G NR G               ++           A  D     V ++QL 
Sbjct: 112 AVEYHIKVNLGLNRYGFD-------RIPDRLREQPVGVFGQFSHAHVD---LEVTALQLA 161

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTA 238
           RF             + +SS  L  P       R G +L G +   N S   P++  ++ 
Sbjct: 162 RFLEQCEAVPRATRHVCNSSAALSLPAARLDAVRSGSALLGVSLMTNPSSRLPLRPALSW 221

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + +  +R   AG  V Y G  ++TR ++  V  +GY DG+   L            +G 
Sbjct: 222 ISCLAQVRNLPAGAAVGYEGAHRVTRPTVTGVVPVGYGDGFVSRL------------VGT 269

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              +      ++G ++MD     +       +G  + + G  + ++     +   N++L 
Sbjct: 270 TVLVGDEPATVIGSVSMDALTVALPRRFP--IGTPVTLIGDGLPMESHLRFASMANWELC 327

Query: 359 VRIGT---RYAKF 368
             +     R  + 
Sbjct: 328 TGLSNDPLRVHRR 340


>gi|313609784|gb|EFR85237.1| alanine racemase [Listeria monocytogenes FSL F2-208]
          Length = 314

 Score =  202 bits (513), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 80/329 (24%), Positives = 134/329 (40%), Gaps = 28/329 (8%)

Query: 52  LYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF 111
              AG + F V  ++E + LR    Q    ++ G    ++  +   N I   S       
Sbjct: 1   AKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFRED 57

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDP 170
           + + ++        L+VD+G  RLG+  ++EA        +    QL  I +H A AD  
Sbjct: 58  WLEELTLEAPLRIHLKVDSGMGRLGIRTVEEARQIETTIASDNQLQLEGIYTHFATADQL 117

Query: 171 SSHVNSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN- 227
            +     QL +F+T+++  K     +   +S+  LL P   F   R GIS+YG T     
Sbjct: 118 ETSYFEQQLTKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEI 177

Query: 228 ---KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
                  ++  ++    ++ +++   G+ VSYG     T    +A   IGYADG     S
Sbjct: 178 KTSLPFELKPALSLYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYS 237

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD---- 340
           G                + G + PI+G++ MD T+  +      + G  + I G D    
Sbjct: 238 GF------------HVLVDGELAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGEDNGNT 283

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           I  DD A    T NY++   +  R  + Y
Sbjct: 284 ITADDAAQYLDTINYEVTCLLNERIPRKY 312


>gi|195953382|ref|YP_002121672.1| alanine racemase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932994|gb|ACG57694.1| alanine racemase [Hydrogenobaculum sp. Y04AAS1]
          Length = 343

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 92/359 (25%), Positives = 162/359 (45%), Gaps = 31/359 (8%)

Query: 14  TALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEEGVKLR 72
             + NN   +     N    AVVK NAYG+G  +++  L +   V+ F V  +EE V+LR
Sbjct: 10  ENILNNISQIYNSV-NKPIIAVVKANAYGMGSAEVSKVLDDNPYVKSFAVACIEEAVELR 68

Query: 73  LYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
               +  I VL G+      + +    L PVISS  Q               + +++DTG
Sbjct: 69  EVDVKKPILVLGGVLDLKDVEYLKHYKLTPVISSAYQFDMI-----KNAGIDFHVKLDTG 123

Query: 132 FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS--HY 189
             RLG    +     H +    +  L         A       ++ Q+++F+ ++     
Sbjct: 124 MGRLGFFELQEDIIGHPNLKGIMTHL---------ASPLDKDYSAFQIQKFKNIVKSLKR 174

Query: 190 KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKAL 249
             IE    SS+G++   ++     R G+++YG         P++ +   +A++I ++   
Sbjct: 175 NSIEIHYQSSAGLMYEKDFT-TAIRIGLAMYGEKPYEGFDIPIKPIYKVKAKVISLKNFK 233

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
            G+ +SYGG   LT+D+ I V ++GYADG P +L+                   G  +P+
Sbjct: 234 KGDKISYGGTYTLTKDATIGVVSMGYADGIPKSLANKWYFD-----------FNGAKLPM 282

Query: 310 LGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +G +TMDMTMF++ + ++I++GDY+            +    T  Y+L+ R+G R  + 
Sbjct: 283 VGAVTMDMTMFELPEGVNIKIGDYVDFVNEGQTFSMASKIVKTIPYELMCRMGKRVKRV 341


>gi|332184182|gb|AEE26436.1| Alanine racemase [Francisella cf. novicida 3523]
          Length = 365

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I++  L+NN   +    GN R    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEINIQTLRNNIKLIKEYVGNVRICFPVKANAYGHGLELIVQHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     + +                       + +
Sbjct: 63  FRVLDVVQKPVMIFGVIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      +F      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQKAFESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVEF 182

Query: 189 Y----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
                + I   L++S G L      + + RPGI  YG   +      ++    +    + 
Sbjct: 183 TKELSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLISE 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGYEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINENDVKVGDIVELISDIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRVIR 362


>gi|158425840|ref|YP_001527132.1| alanine racemase [Azorhizobium caulinodans ORS 571]
 gi|158332729|dbj|BAF90214.1| alanine racemase [Azorhizobium caulinodans ORS 571]
          Length = 374

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 13/369 (3%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           + +   L+IDL A++ NW ++ A        AVVK NAYG G  +I P L + G +DF+V
Sbjct: 5   TADLATLEIDLGAVRQNWRTVRAQYRGPTLGAVVKQNAYGFGLSRIVPLLSSLGCRDFWV 64

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             +EE + +R   P AR+FVL+G+            +IPV+    +L       +     
Sbjct: 65  VCIEEALAVRTLAPDARVFVLHGLAGAAPADFRAHRIIPVLMDASELPRVQAEAAARGPL 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
             A+Q DTG +RLGLS  +      +       +++  ++HLA   +P +  N  Q  RF
Sbjct: 125 DVAIQFDTGLSRLGLSRTDVKRLRDDPSPLAGLRIAAYVTHLAHFSNPVARHNDWQWRRF 184

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           R           S  +S+G+   P  H    R G +LYG     +   P+       A I
Sbjct: 185 RAWTQALPPAPLSFCASAGVFGPPERHAHHARVGSALYGVETTPSSRQPILPAARLTAPI 244

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           + +    AG  V YGG  +  + + +A   +GY  G P +                 G++
Sbjct: 245 LRVMDVPAGTEVGYGGVYRTPQPARLAHVGVGYGGGLPFSFQRQ-----------AYGYV 293

Query: 303 KGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
            G   PI+  + M +   D++         G  +++FGP   +D +A A+G     ++V 
Sbjct: 294 GGLPAPIVSGLAMSLMTLDVSGLPEGLAVPGAQVELFGPAQPVDILAAAAGVAPNVVMVS 353

Query: 361 IGTRYAKFY 369
            G R  + Y
Sbjct: 354 AGARTRRVY 362


>gi|83591223|ref|YP_431232.1| alanine racemase [Moorella thermoacetica ATCC 39073]
 gi|83574137|gb|ABC20689.1| alanine racemase [Moorella thermoacetica ATCC 39073]
          Length = 409

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/384 (22%), Positives = 146/384 (38%), Gaps = 40/384 (10%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            + I+ TAL +N  ++ AL + + R  AV+K +AYG G  ++A    +AG     VT++ 
Sbjct: 14  WITIEATALAHNLKAVKALLAPSTRLLAVIKADAYGAGAVEVARIFLDAGADYLGVTTLA 73

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSHPYA 125
           EG++LR     A + ++  + P +        L   +SS        +   + G      
Sbjct: 74  EGLELRRAGIAAPVLLMSPLLPEELPAAIAAGLTLTVSSRSGAEAIAAAAAATGHRARVH 133

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL---ACADDPSSHVNSVQLERF 182
           L+V+TG  R GL                  +L  + SHL   A        +   Q    
Sbjct: 134 LKVETGLQRTGLEAAAVAPLAREILTWPGVELEGVYSHLAEAARPAAARRQMACFQQVLA 193

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHPMQTVVTAEA 240
                H       + +S+G+L  P  H  + R G  LYG        +   ++     +A
Sbjct: 194 ELEEEHIAIPLRHICNSTGLLTHPEMHLDMVRTGTLLYGQFPYQAPRRGLALKDPWQFKA 253

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY-------PLTLSGLDSEHSPS 293
           RI+ I    AG  V YGG   + + + +AV  +GYADG+       P  L+ L      +
Sbjct: 254 RILFIHDVAAGTPVGYGGDYVVKKATRLAVIPVGYADGFALTAVARPKNLNDLARYLVKT 313

Query: 294 VFL--------GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
                      G    I G   P++G++ M ++M D+     +EVG  + +         
Sbjct: 314 FLAYLGRGGGEGTTVIIGGRTAPVVGRVGMQLSMVDVGHLPEVEVGQIVTLDIRRPTA-- 371

Query: 346 VALASGTTNYDLLVRIGTRYAKFY 369
                            +R  + Y
Sbjct: 372 ----------------SSRLPRVY 379


>gi|320158793|ref|YP_004191171.1| alanine racemase [Vibrio vulnificus MO6-24/O]
 gi|319934105|gb|ADV88968.1| alanine racemase [Vibrio vulnificus MO6-24/O]
          Length = 408

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/377 (18%), Positives = 131/377 (34%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I L   K+N     + ++   +  AV+K +AYG G   + P +    +    + S 
Sbjct: 44  AWLEISLGQFKSNIEQFKSHIAPQTKICAVMKADAYGNGIRGLMPTILEQQIPCVAIASN 103

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--LMSCGVSHP 123
            E   +R      ++  +      + +   D  +  +I S  Q    +            
Sbjct: 104 AEAKLVRESGFTGQLIRVRSASYSEIEQGLDLQIEELIGSEQQARELANLAEKYSKTIKV 163

Query: 124 YALQVDTGFNRLGLSLQ----EALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNS 176
           +    D G  R G+ +     +       +         +       A+D        N 
Sbjct: 164 HLALNDGGMGRNGIDMSTERGQKEAVAIATHPSVAVVGIMTHFPNYNAEDVRTKLKSFNQ 223

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     + I   +A+S   L  P     + RPG  LYG      +     ++V
Sbjct: 224 HAQWLMESAGLKREEITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIV 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + R+  +    AG  V Y        D+++A   +GY+DGYP  +             
Sbjct: 281 AFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
             +  I G    ++G  +M+ TM D+++   +  GD + +FG      I + ++   +  
Sbjct: 330 KAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENAEV 389

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   +FY
Sbjct: 390 IFPELYTIWGTSNPRFY 406


>gi|254388378|ref|ZP_05003613.1| alanine racemase [Streptomyces clavuligerus ATCC 27064]
 gi|197702100|gb|EDY47912.1| alanine racemase [Streptomyces clavuligerus ATCC 27064]
          Length = 367

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/373 (22%), Positives = 143/373 (38%), Gaps = 38/373 (10%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           MH +E   + +DL A+++N   +  +   A   AVVK NAYG G   +A A   AG +  
Sbjct: 16  MHRSE---ITLDLDAVRHNARQLIKMVDGAELWAVVKGNAYGHGAVPVAGAALEAGARAL 72

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V ++ EG+ LR   P+ARI VL  + PG         L  V      L   S       
Sbjct: 73  CVATLGEGLALRERFPRARIVVLGPVGPGSVPAASRAGLECVAHDDASLEALSG------ 126

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           +  Y ++V+ G NR G               ++           A  D     V ++QL 
Sbjct: 127 AVEYHIKVNLGLNRYGFD-------RIPDRLREQPVGVFGQFSHAHVD---LEVTALQLA 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTA 238
           RF             + +SS  L  P       R G +L G +   N S   P++  ++ 
Sbjct: 177 RFLEQCEAVPRATRHVCNSSAALSLPAARLDAVRSGSALLGVSLMTNPSSRLPLRPALSW 236

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + +  +R   AG  V Y G  ++TR ++  V  +GY DG+   L            +G 
Sbjct: 237 ISCLAQVRNLPAGAAVGYEGAHRVTRPTVTGVVPVGYGDGFVSRL------------VGT 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              +      ++G ++MD     +       +G  + + G  + ++     +   N++L 
Sbjct: 285 TVLVGDEPATVIGSVSMDALTVALPRRFP--IGTPVTLIGDGLPMESHLRFASMANWELC 342

Query: 359 VRIGT---RYAKF 368
             +     R  + 
Sbjct: 343 TGLSNDPLRVHRR 355


>gi|229515688|ref|ZP_04405147.1| alanine racemase [Vibrio cholerae TMA 21]
 gi|229347457|gb|EEO12417.1| alanine racemase [Vibrio cholerae TMA 21]
          Length = 428

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 143/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +        V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|153216974|ref|ZP_01950738.1| alanine racemase, putative [Vibrio cholerae 1587]
 gi|124114006|gb|EAY32826.1| alanine racemase, putative [Vibrio cholerae 1587]
          Length = 428

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 143/376 (38%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +        V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHVPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|313900105|ref|ZP_07833605.1| alanine racemase [Clostridium sp. HGF2]
 gi|312955157|gb|EFR36825.1| alanine racemase [Clostridium sp. HGF2]
          Length = 381

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/380 (22%), Positives = 162/380 (42%), Gaps = 33/380 (8%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
            +I    ++ N   +   L+   R  AVVK NAYG G E    A+ +     +   +++E
Sbjct: 11  AEIHTERIRENVMQLKRHLTAGTRFMAVVKGNAYGHGIEPCVQAMDDL-CDWYGTATMQE 69

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYAL 126
            +++R  + +  I V   +   +  +  + N+     S   L+          +     L
Sbjct: 70  ALRVRSVSGEKPILVFGYVSDEEIHLAAENNITLSAFSATFLSHISECCAGMNLKAAVHL 129

Query: 127 QVDTGFNRLGLSLQ-------EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           ++DTGF+R+G+          E L    +  N ++  +   + + A ++        +Q 
Sbjct: 130 KLDTGFHRMGIDCCSSIADCVEQLLPLFSLPNIEITGMYTHLVYGAGSNQRELAFTELQF 189

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYG-GTDKINKSHPMQ 233
           +RF++ I   +  +       + +S   +  P+ H  + R G  ++G  +    +  P++
Sbjct: 190 QRFQSCIRALQERKIDTGICHICNSKAAIHAPDMHMDMVRVGAYIFGLASASEQRLIPLR 249

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V+  +ARI+L+R   AGE V YG      +   IAV A G+ADGY   +         +
Sbjct: 250 EVLVWKARIVLLRDIAAGEGVGYGHAFIAKQPVRIAVLAAGFADGYRRCI---------A 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS--- 350
                   I G   P++GK+ MDM M D+TD  +++VG+Y  + G D     V+      
Sbjct: 301 QSPQSYVSIHGRPAPLIGKVCMDMFMVDVTDIEAVQVGEYALLSGDDGT-GAVSSYLLGQ 359

Query: 351 ---GTTNYDLLVRIGTRYAK 367
              GT   ++ V +  R  +
Sbjct: 360 IIQGTAG-EIAVGMSDRVQR 378


>gi|262165566|ref|ZP_06033303.1| alanine racemase [Vibrio mimicus VM223]
 gi|262025282|gb|EEY43950.1| alanine racemase [Vibrio mimicus VM223]
          Length = 363

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/375 (18%), Positives = 140/375 (37%), Gaps = 28/375 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++I L   ++N     +  + + +  A++K +AYG G   + P +   G+    V S  E
Sbjct: 1   MEISLGQFQSNIEQFKSHMNSDTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNAE 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
              +R    +  +  +     G+   + D N+  +I +  Q +         G +    +
Sbjct: 61  ARAVRESGFKGELIRVRSASLGEMSAVLDLNIEELIGTHQQAMELAELAKKNGKTVKVHM 120

Query: 127 QVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSVQ 178
            ++    G N + ++ +       +   +    +  I++H    D        +      
Sbjct: 121 ALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLNIVGIMTHFPNYDADEVRTKLASFKQHS 180

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                      + I   +A+S   L  P     + RPG  LYG      +     ++V+ 
Sbjct: 181 AWLMEQANLKREDITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVSF 237

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           + R+  + +   G  V Y      +RDS++A   +GY+DGYP  +               
Sbjct: 238 KTRVASLHQLPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------KA 286

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
           +  I G    ++G  +M+ TM D+TD   +  G  + +FG      I + ++   +    
Sbjct: 287 EVLINGQRAKVVGVTSMNTTMVDVTDIKGVLPGQEVALFGQQKNQSIAVSEMENNAELIF 346

Query: 355 YDLLVRIGTRYAKFY 369
            +L    G    +FY
Sbjct: 347 PELYTVWGNSNPRFY 361


>gi|27366912|ref|NP_762439.1| alanine racemase [Vibrio vulnificus CMCP6]
 gi|34098524|sp|Q8D6Q0|ALR2_VIBVU RecName: Full=Alanine racemase 2
 gi|27358479|gb|AAO07429.1| alanine racemase [Vibrio vulnificus CMCP6]
          Length = 408

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/379 (18%), Positives = 135/379 (35%), Gaps = 32/379 (8%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I L   K+N     + ++   +  AV+K +AYG G   + P +    +    + S 
Sbjct: 44  AWLEISLGQFKSNIEQFKSHIAPQTKICAVMKADAYGNGIRGLMPTILEQQIPCVAIASN 103

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--LMSCGVSHP 123
            E   +R    +  +  +      + +     ++  +I S  Q    +            
Sbjct: 104 AEAKLVRESGFEGELIRVRSASTSEIEQALSLDIEELIGSEQQARELASLAEKYSKTIKV 163

Query: 124 YALQVDTGFNRLGLS------LQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHV 174
           +    D G  R G+        +EA+    +     +G   +       A+D        
Sbjct: 164 HLALNDGGMGRNGIDMSTERGPKEAVAIATHPSVAVVG--IMTHFPNYNAEDVRTKLKSF 221

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           N        +     + I   +A+S   L  P     + RPG  LYG      +     +
Sbjct: 222 NQHAQWLMESAGLKREEITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPS 278

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           +V  + R+  +    AG  V Y        D+++A   +GY+DGYP  +           
Sbjct: 279 IVAFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGN--------- 329

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALAS 350
               +  I G    ++G  +M+ TM D+++   +  GD + +FG      I + ++   +
Sbjct: 330 --KAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENA 387

Query: 351 GTTNYDLLVRIGTRYAKFY 369
                +L    GT   +FY
Sbjct: 388 EVIFPELYTIWGTSNPRFY 406


>gi|54303604|ref|YP_133597.1| alanine racemase [Photobacterium profundum SS9]
 gi|46917035|emb|CAG23797.1| putative alanine racemase [Photobacterium profundum SS9]
          Length = 405

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 138/376 (36%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L++ L   K+N     +    + +  AV+K +AYG G   + P +    +    + S  
Sbjct: 42  WLEVSLGQFKSNIEQFKSHIKADTKICAVMKADAYGNGIFGLMPTILEQQIPCVAIASNA 101

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--LMSCGVSHPY 124
           E   +R    + ++  +     G+ K   D N+  +I S  Q  F ++  +      + +
Sbjct: 102 EARAVRESGFKGQLLRVRSASLGEIKQSLDLNIEELIGSHQQAKFIAELGVERNQKINVH 161

Query: 125 ALQVDTGFNRLGLSLQ----EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL- 179
               D G  R G+ +     +A      +         +       AD     +   Q  
Sbjct: 162 LALNDGGMGRNGIDMSTEQGKAEALDIATQANLNIVGIMTHFPNYNADKVRVKLKDFQTN 221

Query: 180 --ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                +        +   +A+S   +  P     + RPG  LYG      +     ++V+
Sbjct: 222 SSWLIKQADLKRDELTLHVANSYVSINVPEAQLDMVRPGGVLYGDLPTNPE---YPSIVS 278

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + RI  I +  A + V Y       RDS++A   +GY+DGYP  +              
Sbjct: 279 FKTRIASIHQLPASQTVGYDSTYITKRDSVLANLPVGYSDGYPRRMGNQAD--------- 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTT 353
               I G    ++G  +M+ ++ DITD   ++ G  + +FG      I + ++   S   
Sbjct: 330 --VIINGQRAKVVGVTSMNTSIVDITDIKGVKQGQEVTLFGKQKNVQISVAEMEDYSKLI 387

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G    ++Y
Sbjct: 388 FPELYTMWGQANPRYY 403


>gi|20137517|sp|Q9KSE5|ALR2_VIBCH RecName: Full=Alanine racemase 2
          Length = 392

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 142/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 29  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 88

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +     D N+  +I +  Q    ++L    G +    
Sbjct: 89  EARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKTLKVH 148

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 149 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 208

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 209 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 265

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +        V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 266 FKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 314

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 315 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 374

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 375 FPELYTLWGTSNPRFY 390


>gi|121586566|ref|ZP_01676352.1| alanine racemase, putative [Vibrio cholerae 2740-80]
 gi|121726850|ref|ZP_01680062.1| alanine racemase, putative [Vibrio cholerae V52]
 gi|147673980|ref|YP_001216876.1| alanine racemase [Vibrio cholerae O395]
 gi|153819283|ref|ZP_01971950.1| alanine racemase, putative [Vibrio cholerae NCTC 8457]
 gi|153822911|ref|ZP_01975578.1| alanine racemase, putative [Vibrio cholerae B33]
 gi|227081483|ref|YP_002810034.1| alanine racemase, putative [Vibrio cholerae M66-2]
 gi|229505102|ref|ZP_04394612.1| alanine racemase [Vibrio cholerae BX 330286]
 gi|229511228|ref|ZP_04400707.1| alanine racemase [Vibrio cholerae B33]
 gi|229518346|ref|ZP_04407790.1| alanine racemase [Vibrio cholerae RC9]
 gi|229608106|ref|YP_002878754.1| alanine racemase [Vibrio cholerae MJ-1236]
 gi|254848434|ref|ZP_05237784.1| alanine racemase [Vibrio cholerae MO10]
 gi|298498598|ref|ZP_07008405.1| alanine racemase [Vibrio cholerae MAK 757]
 gi|9655801|gb|AAF94470.1| alanine racemase, putative [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121549245|gb|EAX59277.1| alanine racemase, putative [Vibrio cholerae 2740-80]
 gi|121630754|gb|EAX63139.1| alanine racemase, putative [Vibrio cholerae V52]
 gi|126510186|gb|EAZ72780.1| alanine racemase, putative [Vibrio cholerae NCTC 8457]
 gi|126519563|gb|EAZ76786.1| alanine racemase, putative [Vibrio cholerae B33]
 gi|146315863|gb|ABQ20402.1| putative alanine racemase [Vibrio cholerae O395]
 gi|227009371|gb|ACP05583.1| alanine racemase, putative [Vibrio cholerae M66-2]
 gi|227013229|gb|ACP09439.1| alanine racemase, putative [Vibrio cholerae O395]
 gi|229345061|gb|EEO10035.1| alanine racemase [Vibrio cholerae RC9]
 gi|229351193|gb|EEO16134.1| alanine racemase [Vibrio cholerae B33]
 gi|229357325|gb|EEO22242.1| alanine racemase [Vibrio cholerae BX 330286]
 gi|229370761|gb|ACQ61184.1| alanine racemase [Vibrio cholerae MJ-1236]
 gi|254844139|gb|EET22553.1| alanine racemase [Vibrio cholerae MO10]
 gi|297542931|gb|EFH78981.1| alanine racemase [Vibrio cholerae MAK 757]
          Length = 428

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 142/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 65  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 124

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +     D N+  +I +  Q    ++L    G +    
Sbjct: 125 EARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKTLKVH 184

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 185 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 244

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 245 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 301

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +        V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 302 FKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 350

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 351 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 410

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 411 FPELYTLWGTSNPRFY 426


>gi|161582006|ref|NP_230956.2| alanine racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|255745708|ref|ZP_05419656.1| alanine racemase [Vibrio cholera CIRS 101]
 gi|262159017|ref|ZP_06030129.1| alanine racemase [Vibrio cholerae INDRE 91/1]
 gi|262169374|ref|ZP_06037066.1| alanine racemase [Vibrio cholerae RC27]
 gi|255736783|gb|EET92180.1| alanine racemase [Vibrio cholera CIRS 101]
 gi|262022187|gb|EEY40896.1| alanine racemase [Vibrio cholerae RC27]
 gi|262029202|gb|EEY47854.1| alanine racemase [Vibrio cholerae INDRE 91/1]
          Length = 407

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 142/376 (37%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  + N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 44  WLEISLGQFQSNIEQFKSHMNANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +     D N+  +I +  Q    ++L    G +    
Sbjct: 104 EARAVRESGFKGELIRVRSASLSEMSSALDLNIEELIGTHQQALDLAELAKQSGKTLKVH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 164 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 223

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 224 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +        V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 281 FKTRVSSLHHLPKDSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 330 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVLPGQEVVLFGQQQKQSIAVSEMENNAELI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    GT   +FY
Sbjct: 390 FPELYTLWGTSNPRFY 405


>gi|32265965|ref|NP_859997.1| alanine racemase [Helicobacter hepaticus ATCC 51449]
 gi|32262014|gb|AAP77063.1| alanine racemase [Helicobacter hepaticus ATCC 51449]
          Length = 413

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/365 (24%), Positives = 163/365 (44%), Gaps = 27/365 (7%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++N F  +++D+ A KNN      ++GNA+  AV+K NAYG G  K+ P +    +    
Sbjct: 37  NTNSF--MEVDIKAFKNNIKVAKKIAGNAKVCAVLKANAYGAGISKVLPTIIEEKIPCVA 94

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
           +TS EE   +R       I  +     G+ K     N+  V+ ++ Q      L    G 
Sbjct: 95  ITSNEEARVIRKMKYTGEILRIRTATMGEIKDGLKYNITEVLGNLDQAKKVDSLAKTIGK 154

Query: 121 SHPYALQVDTG---FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
             P  +++++G    N + LS  +  +           ++  +++H    D      N  
Sbjct: 155 KLPIHIKLNSGGMDRNGIDLSTDKGKESAVKLATLPHLKIKGLMTHFPYDDTSKVKENLK 214

Query: 178 QLER---FRTLISHYKGIEASLASSSGI--LLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
             E    F    +     +  L +++    +  P     + RPG  +YG     +++ P+
Sbjct: 215 HFEEDTDFLISKAKLDRNKLVLHAAASYAAVQVPQSRLDMIRPGKLIYG-YGGGDENLPI 273

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           Q +++ ++++ +I +   G  VSY G   LTRDS +A   +GY DGY  +LS        
Sbjct: 274 QQIMSLKSQVAVINEYPKGSKVSYDGTHTLTRDSKLANIPVGYYDGYAKSLSNQ------ 327

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                GK  I+G+ VP++G++T +  M D+TD   I+ GD + +FG     +I   +   
Sbjct: 328 -----GKVLIRGHKVPVVGRVTKNTFMVDVTDYPDIKAGDEVVLFGKQCGNEITQAEFEK 382

Query: 349 ASGTT 353
            +GT 
Sbjct: 383 GTGTI 387


>gi|37676689|ref|NP_937085.1| alanine racemase [Vibrio vulnificus YJ016]
 gi|37201232|dbj|BAC97055.1| alanine racemase [Vibrio vulnificus YJ016]
          Length = 408

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 68/377 (18%), Positives = 131/377 (34%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I L   K+N     + ++   +  AV+K +AYG G   + P +    +    + S 
Sbjct: 44  AWLEISLGQFKSNIEQFKSHIAPQTKICAVMKADAYGNGIRGLMPTILEQQIPCVAIASN 103

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--LMSCGVSHP 123
            E   +R    +  +  +      + +     ++  +I S  Q    +            
Sbjct: 104 AEAKLVRESGFEGELIRVRSASTSEIEQALSLDIEELIGSEQQARELASLAEKYSKTIKV 163

Query: 124 YALQVDTGFNRLGLSLQ----EALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNS 176
           +    D G  R G+ +     +       +         +       A+D        N 
Sbjct: 164 HLALNDGGMGRNGIDMSTERGQKEAVAIATHPSVAVVGIMTHFPNYNAEDVRTKLKSFNQ 223

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     + I   +A+S   L  P     + RPG  LYG      +     ++V
Sbjct: 224 HAQWLMESAGLKREEITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPE---YPSIV 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + R+  +    AG  V Y        D+++A   +GY+DGYP  +             
Sbjct: 281 AFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGT 352
             +  I G    ++G  +M+ TM D+++   +  GD + +FG      I + ++   +  
Sbjct: 330 KAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENAEV 389

Query: 353 TNYDLLVRIGTRYAKFY 369
              +L    GT   +FY
Sbjct: 390 IFPELYTIWGTSNPRFY 406


>gi|55980031|ref|YP_143328.1| alanine racemase [Thermus thermophilus HB8]
 gi|55771444|dbj|BAD69885.1| alanine racemase [Thermus thermophilus HB8]
          Length = 360

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 32/373 (8%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +++DL AL  N+  +   +G      V+K +AYG G   +A  L   GV  F V 
Sbjct: 11  QARAWVEVDLAALWANYRLLAGRAGG-EVIPVLKADAYGHGALPLARFLEGKGVGRFAVA 69

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           ++EEG +LR    +  + +L  +HP + +      L+P +S++      S+     G+  
Sbjct: 70  TLEEGRRLREGGIKGEVLLLGSLHPLEAEEALRLGLVPTLSNLEAAEALSQRARALGLVP 129

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VDTG NR+G   +EA+          +    +        +D  +     Q  RF
Sbjct: 130 RAHLKVDTGMNRVGFPSEEAVSALRAVEALGVRVEGVYTHLATAGED--AAFVETQRRRF 187

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + +             +S  LL         R G++LYG          ++ ++   AR 
Sbjct: 188 QEVRRALGEGYFYHLENSLGLLRHGAT-AGVRVGLALYGLVP----GFGLRPILRILARP 242

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
            L+++  AG+ V YGG         +A   +GYADG P              F+ G    
Sbjct: 243 TLVKRLKAGDRVGYGGVYVARGGEWLATLPVGYADGLPWG---------AVRFVKGP--- 290

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI------FGPDIKLDDVALASGTTNYD 356
            G ++ + G+I+MD T   +       VG           FGP   L   A A GT  Y+
Sbjct: 291 DGRLLEVAGRISMDQTTVLLPGP----VGLEAVFEVLSADFGPT-GLLAWAEARGTLPYE 345

Query: 357 LLVRIGTRYAKFY 369
           + V +  R  + Y
Sbjct: 346 VAVHLSRRLPRRY 358


>gi|312882516|ref|ZP_07742257.1| alanine racemase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369916|gb|EFP97427.1| alanine racemase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 407

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/376 (17%), Positives = 137/376 (36%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+++L+  + N       L+   R  AV+K +AYG G   + P +    +    + S  
Sbjct: 44  WLEVNLSQFRANIEQFETHLAQGTRICAVMKADAYGNGIYGLMPIIIEKKIPCIAIASNS 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYA 125
           E   +R    +  +  +   +  + K     N+  ++ +V Q+  + +            
Sbjct: 104 EAKAVREAGFKGELIRVRSANLKEVKEGLGLNIEELVGTVDQIKEFEELSREQATPIKIH 163

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           L ++    G N L ++  E              ++  I++H    D        +   + 
Sbjct: 164 LALNDGGMGRNGLDMTTDEGQAHAVRIIESPNIEIVGIMTHFPNYDADEVKQKLASFKTN 223

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
               F       K +   +A+S   +  P     + RPG  LYG      +     ++V+
Sbjct: 224 TQWIFDNTTLERKDVILHVANSYASVNVPESQLDMVRPGGVLYGDLPTNPE---YPSIVS 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + RI  +    A   V Y       + S++A   +GY+DGYP  +              
Sbjct: 281 FKTRIASLHNLPANSTVGYDSTYTTEKKSVLANLPVGYSDGYPRKMGNR----------- 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  + G    ++G  +M+ TM D+++   +  G  + +FG      I + ++   +   
Sbjct: 330 AQVLVNGQRAKVVGVTSMNTTMVDVSNVKGVLPGQEVTLFGQQKQEAISIGEMEEHADVI 389

Query: 354 NYDLLVRIGTRYAKFY 369
             +L    G    ++Y
Sbjct: 390 FPELYTVWGNANPRYY 405


>gi|145298692|ref|YP_001141533.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851464|gb|ABO89785.1| alanine racemase [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 408

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 140/350 (40%), Gaps = 24/350 (6%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            +     L++DLTA + N  ++    G+   +  A++K +AYG G + + P++  A +  
Sbjct: 37  QTASNAWLEVDLTAFEQNLQTLKTRLGDKGPQICAIMKADAYGHGIDLLVPSVVKANIPC 96

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             + S EE    R      R+  +    P + +      L  ++ S+      S +    
Sbjct: 97  IGIASNEEARVAREKGFSGRLMRVRAATPIEVEQALPYKLEELVGSLVSAQGISDIALRH 156

Query: 119 GVSHPYALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             + P  + +++     N + L L +A          K      I++H    +     + 
Sbjct: 157 HTTIPVHVALNSAGMSRNGIDLRLADAKQDALAMLKLKGITPVGIMTHFPVEEKEDVKLG 216

Query: 176 SVQLERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
             Q +     +          I    A+S   L  P+ +F + RPG  LYG  D I    
Sbjct: 217 LAQFKLDSQWLLEAGKLDRSKITIHAANSFATLAVPDAYFDMVRPGGLLYG--DSIPSYT 274

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + V+  + ++  +    AG  V Y     L RDS +A   +GY+DGY   LS      
Sbjct: 275 EYKRVMAFKTQVASVNHYAAGNTVGYDRTFTLKRDSWLANLPLGYSDGYRRALSN----- 329

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
                      I+G  VP++GK +M+  M D+TD   ++ GD + +FG  
Sbjct: 330 ------KAYVLIQGQKVPVVGKTSMNTIMVDVTDLKGVKPGDEVVLFGRQ 373


>gi|167629016|ref|YP_001679515.1| alanine racemase, putative [Heliobacterium modesticaldum Ice1]
 gi|167591756|gb|ABZ83504.1| alanine racemase, putative [Heliobacterium modesticaldum Ice1]
          Length = 394

 Score =  199 bits (507), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 92/353 (26%), Positives = 144/353 (40%), Gaps = 24/353 (6%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            +++D+ AL +N  S+    G+ +    VVK NAYG G  + A  L   GV    VT V 
Sbjct: 4   WVEVDMDALAHNARSIRQYLGDEKILYGVVKANAYGCGIVECARCLVENGVDRLAVTHVS 63

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--GVSHPY 124
           EGV+LR     A I V+      +   +    L   +S V +    ++          P 
Sbjct: 64  EGVQLRRSGIDAPILVMAPFMAEETGDLVRFGLTASVSDVDRAVQIAQEARRQGRRGLPV 123

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++V+TG  R G+    A         +    L    +HLA A          Q+ RF  
Sbjct: 124 HIKVETGLGRTGVVAAAAPLLVAAIVGQDELYLEGAFTHLATAATGDVRQVHRQVARFLE 183

Query: 185 LISHYKGIE------ASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVT 237
            ++  +           +A+S+  L  P YHF   R G  LYG     +     ++ V  
Sbjct: 184 TVAAMEACAGFSIPVKHVANSAAALAFPQYHFDGVRIGTLLYGQPAGPVAAGLALRDVWR 243

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----------PLTLSGLD 287
            +AR+  +     G  V YG      R++ +AV  +GY DGY             L+ + 
Sbjct: 244 LKARVAHVATLPPGHGVGYGRAYVTRRETRVAVLPVGYVDGYQLEPVSVPVSLWDLAKVL 303

Query: 288 SEHSPSVFLGGK----GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
            + S + F  G       I     P+LGK+ M MTM D+TD   +++G  +Q+
Sbjct: 304 VKTSAAYFGLGPTARSVRIGERRAPVLGKVAMQMTMIDVTDIPDVQLGTVVQL 356


>gi|254374164|ref|ZP_04989646.1| alanine racemase [Francisella novicida GA99-3548]
 gi|151571884|gb|EDN37538.1| alanine racemase [Francisella novicida GA99-3548]
          Length = 365

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I +  L+NN   +    G+A+    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEISVQTLRNNITIIKEYVGSAKICFPVKANAYGHGLELIVEHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     I +                       + +
Sbjct: 63  FRVLDVVEKPVMIFGVIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQQAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 Y----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
                +GI   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQGIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRAIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|328676829|gb|AEB27699.1| Alanine racemase [Francisella cf. novicida Fx1]
          Length = 365

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I    L+NN   +    G+A+    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEISAQTLRNNIRIIKEYVGSAKICFPVKANAYGHGLELIVEHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     + +                       + +
Sbjct: 63  FRVLDVVEKPVMIFGVIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF  ++  
Sbjct: 123 NTGMNRMGVDYSDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDGIVEF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRAIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|319779710|ref|YP_004130623.1| Alanine racemase [Taylorella equigenitalis MCE9]
 gi|317109734|gb|ADU92480.1| Alanine racemase [Taylorella equigenitalis MCE9]
          Length = 412

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 82/381 (21%), Positives = 147/381 (38%), Gaps = 37/381 (9%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             +++D+ A +NN   +  L +G ++  A++K +AYG G   + P++    V    + S 
Sbjct: 43  AWIEVDVQAFENNIAELQKLLNGKSKVCAILKADAYGHGINLLMPSIIKMNVPCIGIASN 102

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           EE    R +  +  I  +      + K     ++  ++  V Q    + L    G     
Sbjct: 103 EEARIARAHNYEGTIMRVRAASINEIKDGLKYDMEELVGDVTQAQTINALAKEAGKDVRI 162

Query: 125 ALQVDTG---FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH-----VNS 176
            + +++     N + +S                 ++  I++H    ++          N 
Sbjct: 163 HISLNSAGMDRNGIDMSTDNGRAEALELTKFSNLKVVGIMTHYPEENEEIIRKDLVRFNE 222

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                      +   I    A+S   L  P  HF + RPG  LYG  D I      + ++
Sbjct: 223 DSKWLIENAGLNRNQIVIHTANSYTTLTVPEAHFDMVRPGGLLYG--DSIPTRTEYKRIL 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + ++R+  I     G  V Y    KL RDS++A    GY+DGY    S            
Sbjct: 281 SFKSRVANINHYPKGSTVGYDRTFKLERDSMLANLPFGYSDGYRRIFSN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-------PDIKLDDV--A 347
            G   I G+ VP++G+++M+ TM D+TD   I  G  + IFG           ++++  A
Sbjct: 330 KGYVLINGHKVPVVGRVSMNTTMVDVTDFPDILEGAEVVIFGTQGDAKVEQADIEEINGA 389

Query: 348 LASGTTNYDLLVRIGTRYAKF 368
           L +      L    G    + 
Sbjct: 390 LLAD-----LYTVWGNSNPRI 405


>gi|254372706|ref|ZP_04988195.1| alanine racemase [Francisella tularensis subsp. novicida GA99-3549]
 gi|151570433|gb|EDN36087.1| alanine racemase [Francisella novicida GA99-3549]
          Length = 365

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 82/371 (22%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I +  L+NN   +    G+A+    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEISVQTLRNNITIIKEYVGSAKICFPVKANAYGHGLELIVEHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     I +                       + +
Sbjct: 63  FRVLDVVEKPVMIFGVIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 Y----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
                +GI   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQGIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|114567922|ref|YP_755076.1| alanine racemase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338857|gb|ABI69705.1| Alanine racemase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 399

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 83/354 (23%), Positives = 145/354 (40%), Gaps = 25/354 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+ID+ A+K N   + +L  ++     V+K NAYG G   +A  LY  GV  F V+ + 
Sbjct: 9   WLEIDIDAVKQNLEGVKSLLDSSVHLLVVLKANAYGHGAVNMARFLYQNGVDFFAVSFLS 68

Query: 67  EGVKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPY 124
           E ++LR    ++ I V    +   Q K     ++   ISS+      +++          
Sbjct: 69  EALELRKAGIRSSILVFSPVVDEEQVKEAIKNHITLSISSLFDSQLLNQVSERLNQPLRV 128

Query: 125 ALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            L+VD+G  R G  +++E      +        +  I +H+A A   +      Q  RF 
Sbjct: 129 HLKVDSGLGRFGFTNIEEISTACQSLKENSCIYIEGIYTHMADAASGNPAYTEEQFRRFM 188

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVV 236
            +++      YK      A+S+  L  P+ H    R G  + G     +   P+      
Sbjct: 189 EIVNKLVKAGYKIPLRHCANSAVFLKYPHMHLDAVRIGTLISGQYPVGDLPRPVELIDPF 248

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + +II ++   AG+ + Y     L  D+ IAV  +GY DG  L +          + +
Sbjct: 249 RFKCKIISLKSLKAGDYLGYSRSYCLKEDAQIAVIPVGYMDGLGLNVGNKAEGFIDLLKI 308

Query: 297 --------------GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
                           +  I+  + P+ GK+ M M M +I   L + +GD ++I
Sbjct: 309 LLKNIFFYYDLGRFKLQVKIRDSLYPVRGKVFMQMAMIEIPAGLDLSIGDEVEI 362


>gi|208779130|ref|ZP_03246476.1| alanine racemase [Francisella novicida FTG]
 gi|208744930|gb|EDZ91228.1| alanine racemase [Francisella novicida FTG]
          Length = 365

 Score =  199 bits (505), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 146/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I +  L+NN   +    G+A+    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEISVQTLRNNITIIKEYVGSAKICFPVKANAYGHGLELIVEHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     I +                       + +
Sbjct: 63  FRVLDVVEKPVMIFGVIEYNYIDRILSKNIRISIQDYNDIEKLEKFAKYYNKKPFVHVNI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|237755608|ref|ZP_04584223.1| alanine racemase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692235|gb|EEP61228.1| alanine racemase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 311

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 27/327 (8%)

Query: 48  IAPALYNAG-VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV 106
           ++  L     ++ F V +  EG +LR       I +L G+   + +I+   NLIPVIS  
Sbjct: 1   MSKYLQELDFIEYFCVATPLEGKELRENGIFKNILILGGVLKEETEILNQYNLIPVISDF 60

Query: 107 PQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
            QL           +    L+ DTG  RLG  L+            K  ++  +++HL+ 
Sbjct: 61  NQLEV----ARKLKNRKIHLKFDTGMRRLGFYLENVEKIKPL---LKEFEIEGVLTHLSS 113

Query: 167 ADDPSSHVNSVQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
           AD         Q++ F+ +++    K     + +S+G++   ++   + R G+++YG   
Sbjct: 114 ADTDR-EYTINQIKEFKEILNLLDVKPKYIHVQNSAGVVYECDF-CNVIRVGLAMYGEKP 171

Query: 225 KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
             +    ++ V++ +++II I+    G+ VSY G     +   +A+   GYADG P +LS
Sbjct: 172 FEDYPIELKQVMSVKSKIISIKDVKTGDRVSYNGSFVAKKPMKVAIVPFGYADGLPRSLS 231

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD---- 340
                            + G   PILGKITMDMT+ D+++  +I +GD + I G      
Sbjct: 232 NRWFF-----------LVNGKEAPILGKITMDMTIVDVSEIENINIGDEVVIIGESGDKR 280

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAK 367
           I   D+A   GT +Y+++  I  R  +
Sbjct: 281 ITFGDIANIVGTISYEIMCGISKRVVR 307


>gi|118587123|ref|ZP_01544552.1| alanine racemase [Oenococcus oeni ATCC BAA-1163]
 gi|118432402|gb|EAV39139.1| alanine racemase [Oenococcus oeni ATCC BAA-1163]
          Length = 371

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 83/378 (21%), Positives = 140/378 (37%), Gaps = 28/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R++   ++L  N      +SG       VK NAYG G  +++      GV    V+
Sbjct: 6   HRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++EG+ +R       I +L  I      I    + +  +SS+  L    K++       
Sbjct: 66  VLDEGIAIRQAGINDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILGKEK-LS 124

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLER 181
             L VDTG NR+G+  ++ L        +     S   I +H A +D+P  H    Q  R
Sbjct: 125 VNLAVDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNR 184

Query: 182 FRTLISH-YKGIEASLASSSGILLGPNY---HFQLTRPGISLYGGTDKINKSHPMQ---T 234
           +  LI          + +S   +           + R G  +YG         P+     
Sbjct: 185 WYELIDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKP 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V   ++ +  ++K  AGE +SYG +   +RD+ I    IGY DG+               
Sbjct: 245 VFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQDFQL------ 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
                  I G     +G+I MD  M  +       +G  + + G     +  L D+   S
Sbjct: 299 ------LIDGQKCRQVGQIAMDQMMVVLPHEYP--IGTEVTLIGKSGKYENTLYDLHKHS 350

Query: 351 GTTNYDLLVRIGTRYAKF 368
           G   + + V    R  + 
Sbjct: 351 GVPPWKITVAFSDRLKRV 368


>gi|226226855|ref|YP_002760961.1| alanine racemase [Gemmatimonas aurantiaca T-27]
 gi|226090046|dbj|BAH38491.1| alanine racemase [Gemmatimonas aurantiaca T-27]
          Length = 403

 Score =  198 bits (504), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 87/405 (21%), Positives = 142/405 (35%), Gaps = 56/405 (13%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALY------- 53
           M   +   L +D +AL++N   +   +       +VK ++YGLG   +  AL        
Sbjct: 1   MTRQDRAWLDVDGSALRHNLAVLRQHA-RVPLLPMVKADSYGLGAIGVCRALGVPFAEGS 59

Query: 54  --------NAGVQ---DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV 102
                    AG        + S++E   LR    + RI     +   +       ++ P 
Sbjct: 60  VHAPTSTGTAGADAPWGVGIASLDEAEALRDAGCEGRILCATPLLARELPRALALSVRPA 119

Query: 103 ISSVPQLTFY-------------SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNS 149
           +     L  +             +  ++C    PY L +DTG  R G             
Sbjct: 120 LHRAEDLVAWQALSAARGVAHGVAHGVACDAVAPYHLSIDTGMARAGARWDTVARLRDAV 179

Query: 150 FNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYH 209
                     + +H   AD+        Q  RF   ++  + +  +         G    
Sbjct: 180 LA---VPPEGVFTHFHSADESL-PSRDEQDARFADALTVLRDVLPAGILEHRDNSGGIAS 235

Query: 210 FQLTRPGISLY----GGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD 265
                PG              +    ++ V    AR++ +R  L GE VSYG        
Sbjct: 236 RTTGSPGQLARPGIALYAGMFSAELGLRQVAHLRARVVDVRDVLPGESVSYGATWTAEGT 295

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
             IA  + GYADGY   LS +           G+  I G   P++G++TMDMTM D++  
Sbjct: 296 HRIATLSAGYADGYRRHLSNV-----------GEVLIHGTRCPVVGRVTMDMTMVDVSAV 344

Query: 326 LSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYA 366
                GD   + G D    +  + VA  +G + Y+LLV +  R  
Sbjct: 345 R-CAPGDVATMLGADGSQVLTAEAVAGRAGVSPYELLVGLCLRVP 388


>gi|116490276|ref|YP_809820.1| alanine racemase [Oenococcus oeni PSU-1]
 gi|290889662|ref|ZP_06552751.1| hypothetical protein AWRIB429_0141 [Oenococcus oeni AWRIB429]
 gi|116091001|gb|ABJ56155.1| alanine racemase [Oenococcus oeni PSU-1]
 gi|290480659|gb|EFD89294.1| hypothetical protein AWRIB429_0141 [Oenococcus oeni AWRIB429]
          Length = 371

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/377 (22%), Positives = 140/377 (37%), Gaps = 28/377 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R++   ++L  N      +SG       VK NAYG G  +++      GV    V+
Sbjct: 6   HRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVS 65

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++EG+ +R       I +L  I      I    + +  +SS+  L    K++       
Sbjct: 66  VLDEGIAIRQAGIDDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILGKEK-LS 124

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLER 181
             L VDTG NR+G+  ++ L        +     S   I +H A +D+P  H    Q  R
Sbjct: 125 VNLAVDTGMNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNR 184

Query: 182 FRTLISH-YKGIEASLASSSGILLGPNY---HFQLTRPGISLYGGTDKINKSHPMQ---T 234
           +  LI          + +S   +           + R G  +YG         P+     
Sbjct: 185 WYELIDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKP 244

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V   ++ +  ++K  AGE +SYG +   +RD+ I    IGY DG+               
Sbjct: 245 VFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQDFQL------ 298

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
                  I G     +G+I MD  M  +       +G  + + G     +  L D+   S
Sbjct: 299 ------LIDGQKCRQVGQIAMDQMMVALPHEYP--IGTEVTLIGKSGKYENTLYDLHKHS 350

Query: 351 GTTNYDLLVRIGTRYAK 367
           G   + + V    R  +
Sbjct: 351 GVPPWKITVAFSDRLKR 367


>gi|241668785|ref|ZP_04756363.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254877316|ref|ZP_05250026.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254843337|gb|EET21751.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 365

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 150/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E+I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYVGNAKICFPVKANAYGHGIEEIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++   T +  +      +   E+++ +   + +                       + V
Sbjct: 63  FRVTAITKKPVLVFGVIYYEYLERMVSENIRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +       ++N K   L  + SHLACAD+     N+ Q +RF  ++ +
Sbjct: 123 NTGMNRMGVCYNDVCRTIKRAYNSKWVVLEGVYSHLACADNRDHPTNTKQKKRFSEIVEY 182

Query: 189 ----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
                + I   L++S G L      + + RPGI +YG   +      ++    +    ++
Sbjct: 183 AKELSQDIICHLSNSYGFLGDKEICYDMVRPGILIYGFLPEFYVERSIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I +   G+ V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIIELEEGDGVGYSMIYRGFDGEKVAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +     +++VGD +++             +A    T  YD
Sbjct: 292 IDNVMYPMAGRMSMDGLTVSLGHNEHNVKVGDVVELISDIPRNRNSAFLMAKQVNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|188501472|gb|ACD54604.1| alanine racemase-like protein [Adineta vaga]
          Length = 379

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/380 (23%), Positives = 151/380 (39%), Gaps = 30/380 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVE 66
           ++IDL A++ N     ++ +   +   +VK +AYG+G +KI         +    V    
Sbjct: 1   MRIDLNAMRCNLEQFCSIVASTTKMMMMVKASAYGVGIKKIGKWAEKTRLIDYLAVVYTA 60

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP--- 123
           EGV+LR       I V+  I     KI  + NL  VI S+  L      +          
Sbjct: 61  EGVELRKANIHLPIMVIN-IDKEDFKICQEYNLELVIYSISLLQQLMIWLEKNTQICSFP 119

Query: 124 -YALQVDTGFNRLGLSLQEAL---DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              ++++TG NRLGL + E     +        +L   S+     A  D       + Q 
Sbjct: 120 SIHVKINTGMNRLGLDIDEIPAFLNILFEYTRCRLMVKSIYTHVAASDDPQEDQYTAEQT 179

Query: 180 ERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT-DKINKSHPMQ 233
             + + +          +   + +S GIL  PN HF + R G  LYG     +     + 
Sbjct: 180 RAYLSSVHILETGLGYTVLKHMCNSMGILRHPNLHFDMVRVGGGLYGAAECFLPYMSTLL 239

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + +  +R       + Y  + ++ RDS I +  +GYADG    L          
Sbjct: 240 PAISMMSTVTQVRHVKKDSTIGYNRRGRVNRDSFIGIIRLGYADGLRRQLGNGH------ 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE----VGDYIQIFGPDIKLDDVALA 349
               G  +I    VP +G I MD  M D+TD           + ++IFG    ++++A  
Sbjct: 294 ----GHVWIHDCQVPFIGSICMDFAMIDLTDVPVDNKYELENESVEIFGSHNNIEEIARC 349

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           S T  +D +  IG R  + Y
Sbjct: 350 SDTIVFDFISTIGKRVKRVY 369


>gi|238927300|ref|ZP_04659060.1| possible alanine racemase [Selenomonas flueggei ATCC 43531]
 gi|238884887|gb|EEQ48525.1| possible alanine racemase [Selenomonas flueggei ATCC 43531]
          Length = 283

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 21/293 (7%)

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQVDTGFNRLGLSLQEALD 144
           + P   + + D ++   +  +  +   S+     G +    L ++TG  R+G+  ++A +
Sbjct: 1   MEPESAREVVDGDITQTVCRMDLVEALSQEAVRQGKTVKVHLTIETGMGRIGVHPKDAAE 60

Query: 145 FTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA-----SS 199
                      +L  I SH A AD P       Q++ F+      +     +       S
Sbjct: 61  TAKKIAALPNVELEGIFSHFALADIPDKTFTKQQVKLFKDACDAIEAAGIHIPIKHIAES 120

Query: 200 SGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--QTVVTAEARIILIRKALAGELVSYG 257
           + IL  P+ HF + R GI  YG       + P+  +  +   ARI+ I+    GE V YG
Sbjct: 121 AAILEIPDVHFDMVRAGIIQYGLWPSDEVTRPIDLRPCMKFCARIVYIKTIQPGESVGYG 180

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
            +    R++ IA   +GYADGY               + GG   + G   PI G++ MD 
Sbjct: 181 RKFIAERETRIATLPVGYADGYIRA------------YAGGSVEVCGKRAPIAGRVCMDQ 228

Query: 318 TMFDITDSLSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            M D+TD    ++GD   +FG D +  D++A  + T NY+++  +  R  + Y
Sbjct: 229 FMIDVTDIPEAKLGDVCTLFGSDSLTADEIAGWANTINYEVVCLVSERVPRVY 281


>gi|187918034|ref|YP_001883597.1| alanine racemase [Borrelia hermsii DAH]
 gi|119860882|gb|AAX16677.1| alanine racemase [Borrelia hermsii DAH]
          Length = 366

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 25/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  ++   + I+L  L +N  S+          A +K +AYG G  +    L   GV  F
Sbjct: 1   MTKHK--EIIINLQNLNHNLTSIKNHIQKRELVATLKSDAYGHGLIQTFKFLKEKGVNYF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCG 119
            +  +++ +KL+       I +         K +   N+ P ++    L+   +      
Sbjct: 59  GLFWIDDALKLKKIDKNVNILLYINTDKNAIKNLVKFNITPFVADSQYLSLIEQECRKQN 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VD G NR G+ +++AL+      N K  +   I +HL   ++  + +   Q+
Sbjct: 119 KKIKAHLKVDVGMNRYGIKIEDALNLAIQIQNSKSIEFEGICTHLPTTEN--TKITQTQI 176

Query: 180 ERFRTLIS--HYKGIEASLASSSGILLGPNY----HFQLTRPGISLYGGTDKINKSHPM- 232
           E+F   I+    K I      +S      NY     F + RPG+ LYG     N S+   
Sbjct: 177 EKFVYFINKLKSKNINPKFIHASNSEHIANYKISEKFNMVRPGLILYGYHPNPNISNNNL 236

Query: 233 --QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + V+   ++II ++    GE +SY G      D  I +  +GY DG P   S      
Sbjct: 237 QLKPVLNLYSKIIFLKNIKKGEQISYSGLFTAKEDMQIGLIPVGYFDGIPQNTSN----- 291

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                      I+     I GKI M++++ +I   L I +G+ ++I    + LD ++  S
Sbjct: 292 ------NFYCIIRDRKCFIKGKICMNISIIEIPKDLKINIGEKVEIISERLSLDILSKES 345

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           G + Y++L  IG    K Y
Sbjct: 346 GISKYEILCSIGKHEKKKY 364


>gi|54113967|gb|AAV29617.1| NT02FT0827 [synthetic construct]
          Length = 365

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/371 (23%), Positives = 145/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +   D  +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEDEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIVR 362


>gi|134302328|ref|YP_001122297.1| alanine racemase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|172044165|sp|A4IZ25|ALR_FRATW RecName: Full=Alanine racemase
 gi|134050105|gb|ABO47176.1| alanine racemase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 365

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDSLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|167624749|ref|YP_001675043.1| alanine racemase [Shewanella halifaxensis HAW-EB4]
 gi|167354771|gb|ABZ77384.1| alanine racemase [Shewanella halifaxensis HAW-EB4]
          Length = 406

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 135/376 (35%), Gaps = 28/376 (7%)

Query: 8   RLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+++LT   +N   +      N +  A++K +AYG G   + P +    +    VTS E
Sbjct: 43  WLEVNLTQFDSNIKELKNHIQSNVKVCAIMKADAYGNGIAGLMPTVLANNIPCIGVTSNE 102

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E   +R    +  +  +      +       ++   +    Q T   +            
Sbjct: 103 EIRIVRDAGFRGSLIRVRSASIAEISDTLQYDVEEFVGDANQATLLSAMAAKLDKPLKVH 162

Query: 126 LQVDTG---FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           L +++G    N + +S Q  L+            +  I++H    D            + 
Sbjct: 163 LVLNSGGMGRNGVDVSTQSGLNEAVQIATTADLDVVGIMTHFPSYDRDDVLVKSKSFYNS 222

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            L            +     +S   L  P  HF + RPG  LYG      +     ++VT
Sbjct: 223 ALNIIEESGLKRDSVTIHSGNSYVALNVPEAHFDMVRPGGVLYGDQPTNPE---FPSIVT 279

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + RI  +     G  V Y    KL R+SL+A   +GY+D +P  +              
Sbjct: 280 FKTRIASLVDLPKGATVGYDSTIKLERESLLANLPVGYSDSFPRKMGNTAD--------- 330

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
               + G    ++G I+M+ +M D+TD   ++ GD + +FG      I   +    +   
Sbjct: 331 --VLVNGQRAKVMGVISMNTSMIDVTDLSGVKEGDEVVLFGYQGKESILAPEFEKNADVI 388

Query: 354 NYDLLVRIGTRYAKFY 369
             ++  + G    + Y
Sbjct: 389 FPEIYTQWGQTNPRIY 404


>gi|85708650|ref|ZP_01039716.1| alanine racemase [Erythrobacter sp. NAP1]
 gi|85690184|gb|EAQ30187.1| alanine racemase [Erythrobacter sp. NAP1]
          Length = 355

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 176/364 (48%), Gaps = 28/364 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L++D  ALK+NW  ++ +SG+A   A VK + YGLG     P L  AG ++FFV + +E 
Sbjct: 18  LRVDTEALKDNWRMLDRMSGDAGAGAAVKADCYGLGVSICVPTLVEAGCRNFFVANWDEA 77

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            +L  Y    +I VL G    QE      + I  + +             G      L +
Sbjct: 78  EELSHYVAPEQIAVLQGPVTPQEADFAKASGILPVINSIHQAKLWTKAGGGT---CHLMI 134

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG NRLG++  +  D    + +  +      +SHLA AD+    +N+ QL  +R  +  
Sbjct: 135 DTGINRLGIAPSDISDPAIAALDIDV-----AMSHLASADE-DGPMNARQLALYRECLGS 188

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
            +    SLA+S+GI LG +Y F LTRPG++LYGG  +      ++ V   +A ++  R  
Sbjct: 189 VRHKRESLANSAGIALGMDYAFDLTRPGLALYGGIARPELEGRIKQVAYIKACVLQTRSL 248

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
            AG+ V Y G+   +    +   +IGYADG+                 G     +G  +P
Sbjct: 249 KAGDAVGYNGEFVASEPMRVGTISIGYADGFLRA-----------RGPGEAFMFEGKRLP 297

Query: 309 ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD--DVALASGTTNYDLLVRIGTRYA 366
           +LGK++MDM + D+  +  ++ GD++     D+  D  + A  S  + Y+LL  +G R  
Sbjct: 298 LLGKVSMDMVVVDLAHAPEVKEGDWL-----DVPFDLLNAARQSSVSQYELLTVLGRRL- 351

Query: 367 KFYT 370
           + ++
Sbjct: 352 RHWS 355


>gi|33593228|ref|NP_880872.1| alanine racemase, catabolic [Bordetella pertussis Tohama I]
 gi|33563603|emb|CAE42504.1| alanine racemase, catabolic [Bordetella pertussis Tohama I]
 gi|332382637|gb|AEE67484.1| alanine racemase, catabolic [Bordetella pertussis CS]
          Length = 387

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 73/367 (19%), Positives = 130/367 (35%), Gaps = 24/367 (6%)

Query: 11  IDLTALKNNWHSMNALSG----NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ID  A+ +N   +    G      R  A VK +AYG G   + P L         V  + 
Sbjct: 19  IDPIAVAHNLEVLRQRLGVGVDGPRIWATVKADAYGHGLHNVLPGLRA--ADGIAVRHLH 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  + R       I V  G+   +E  +     + ++ +      +          P+  
Sbjct: 77  EAHQCRRVGWSGPIMVYAGLTHEREAALLTLQQLHLVITDMTQLEWLPGKPLYSCAPWIW 136

Query: 127 QVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLERFRT 184
               G  R  GL   E           +       + HL   A+  S      +   F  
Sbjct: 137 LRYIGATRLGGLDASEYRRAYARCRELQQHGALRGVGHLNHYANAASVGDLEREHADFEA 196

Query: 185 LISHYKGIEASLASSSGILL-GPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEA 240
            I    G  ++  S++  +L          RPG++LYG +    +      ++  +T  +
Sbjct: 197 CIRGLPGPVSTCNSAAACVLPTMAARTDWVRPGLALYGVSPIPGRAGRDLGLRPAMTLRS 256

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +   +   AG  V YG      +   + +   GY DGYP         H+P        
Sbjct: 257 TLCATQNLPAGASVGYGCTFVADQPMALGLVRCGYGDGYP---------HNPRASF--PV 305

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLLV 359
            + G +   +G+I+MD+   D+    +   G  + ++G P + ++ +A A+GT   +LL 
Sbjct: 306 QVDGVLTRTVGRISMDLMAVDLRPIPAAARGAPVVLWGSPQLPVEHIAHAAGTIAAELLT 365

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 366 GLTARVP 372


>gi|269120416|ref|YP_003308593.1| alanine racemase [Sebaldella termitidis ATCC 33386]
 gi|268614294|gb|ACZ08662.1| alanine racemase [Sebaldella termitidis ATCC 33386]
          Length = 367

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/356 (23%), Positives = 158/356 (44%), Gaps = 28/356 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +KI+   +  N   +  ++       VVKD+AYGLG E I P LYN G + + V   EE 
Sbjct: 5   VKINRENIIKNLKRIRNMTP---LICVVKDDAYGLGIENILPVLYNEGERYYAVAFFEEA 61

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQ 127
            ++R       I +L      +        +   + S+ Q   +   L          ++
Sbjct: 62  SEIRKMYEDVNIIILNYTEEEKLHEAVKDKIEVSVFSMLQLHRYIEILGDKIPELGIHIK 121

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
            +TG NRLG  ++E  +      ++   Q+  + SH++ +++  +     QLE+F  + +
Sbjct: 122 FNTGMNRLGFDIEETPEL-CRIISENNLQVKSVFSHISNSENIEN--TEKQLEKFENITN 178

Query: 188 ------HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                    G     AS +       Y+F  +R G+++YG    ++K   ++  ++ E++
Sbjct: 179 LLKKHEINYGFRHISASPALFQYTGKYNFDFSRVGMAIYGLEP-LSKDTGLEKCISIESK 237

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           II I+    GE +SYG   +L +D+ + +  +GYA G  + +             G    
Sbjct: 238 IINIKNVKKGEYISYGENNRLEKDTAVGIIPMGYAQGIQMQIENK----------GAYAL 287

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTT 353
           I G   P++G++ MDM + DI+   ++ + D + + G     +I L D++  + T 
Sbjct: 288 INGKKAPVIGEVCMDMLLLDISGIENVNLLDSVVLLGKSGNEEITLRDISKWTSTI 343


>gi|254226880|ref|ZP_04920449.1| alanine racemase [Vibrio cholerae V51]
 gi|125620597|gb|EAZ48962.1| alanine racemase [Vibrio cholerae V51]
          Length = 411

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/373 (18%), Positives = 141/373 (37%), Gaps = 28/373 (7%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L   ++N     +  S N +  A++K +AYG G   + P +   G+    V S  
Sbjct: 51  WLEISLGQFQSNIEQFKSHMSANTKICAIMKADAYGNGIRGLMPTIIAQGIPCVGVASNA 110

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  +      +   + D N+  +I +  Q    ++L    G +    
Sbjct: 111 EARAVRESGFKGELIRVRSASLSEMSAVLDLNIEELIGTHQQALDLAELAKQSGKTIKVH 170

Query: 126 LQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           + ++    G N + ++ +       +   +    +  I++H    +         Q +  
Sbjct: 171 IALNDGGMGRNGIDMTTEAGKKEAVSIATQPSLSVVGIMTHFPNYNADEVRAKLAQFKES 230

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
            T +     ++       +A+S   L  P     + RPG  L+G      +     ++V+
Sbjct: 231 STWLMQQANLKREEITLHVANSYTALNVPEAQLDMVRPGGVLFGDLPTNPE---YPSIVS 287

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            + R+  +     G  V Y      +RDS++A   +GY+DGYP  +              
Sbjct: 288 FKTRVSSLHHVPKGSTVGYDSTFTTSRDSVLANLPVGYSDGYPRKMGN-----------K 336

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
            +  I G    ++G  +M+ T+ D+T+   +  G  + +FG      I + ++   +   
Sbjct: 337 AEVLINGQRAKVVGVTSMNTTVVDVTEIKGVIPGQEVVLFGQQQKQSIAVSEMENNAELI 396

Query: 354 NYDLLVRIGTRYA 366
             +L    GT   
Sbjct: 397 FPELYTLWGTSNP 409


>gi|86138387|ref|ZP_01056961.1| alanine racemase [Roseobacter sp. MED193]
 gi|85824912|gb|EAQ45113.1| alanine racemase [Roseobacter sp. MED193]
          Length = 382

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/377 (21%), Positives = 146/377 (38%), Gaps = 27/377 (7%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           NE    +I    +  N   +++ L    R  AV+K +AYG G E + PAL   GV+   +
Sbjct: 6   NESAWCEISPAQISQNLRHTLDRLPAQTRLCAVIKADAYGHGIENVVPALLAQGVRHIGI 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           ++  E   +R       I  L    P + +     N+  +I SV  +      +      
Sbjct: 66  SANSEARAVRAAGFTGAILRLRTATPEEVEDALSYNVQELIGSVGGMQAILNQLGARGLP 125

Query: 123 PYALQVD---TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA--CADDPSSHVNSV 177
           P  L ++      + + LS Q+              ++  + +H      D+ + ++   
Sbjct: 126 PVHLSLNAGGMSRDGVELSTQQGRTDCGRILELGAERIVGLCTHFPSNSFDELADNIARF 185

Query: 178 QL---ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           Q      F       + I     S+  +  G +    + R G  L+G      +  P   
Sbjct: 186 QQDLAWVFANSSLRREDILTHAGSTLTLAAGQDPKVDMMRCGAILFGIAGAGPEFRP--- 242

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  ++R+I +     G  V Y     L  D L+A  A+GYA+GY   +S          
Sbjct: 243 AMQLKSRVISLGTYPKGSTVGYDRTCVLPDDRLLASVAMGYANGYSRQMS---------- 292

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
             G +  I+G + P++G I+M+  + D+T+   + +GD +  FG     +I    +   S
Sbjct: 293 -KGAQVLIRGQICPVMGAISMNTLVVDVTEVPGVAIGDEVVAFGSQGGCEIGAAAIEGGS 351

Query: 351 GTTNYDLLVRIGTRYAK 367
           GT   DL    G R  +
Sbjct: 352 GTILADLFSDWGQRNPR 368


>gi|56707702|ref|YP_169598.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110670173|ref|YP_666730.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198]
 gi|254370208|ref|ZP_04986214.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033]
 gi|81820797|sp|Q5NH94|ALR_FRATT RecName: Full=Alanine racemase
 gi|123359566|sp|Q14IP6|ALR_FRAT1 RecName: Full=Alanine racemase
 gi|56604194|emb|CAG45206.1| alanine racemase [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110320506|emb|CAL08589.1| alanine racemase [Francisella tularensis subsp. tularensis FSC198]
 gi|151568452|gb|EDN34106.1| alanine racemase [Francisella tularensis subsp. tularensis FSC033]
 gi|282158869|gb|ADA78260.1| alanine racemase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 365

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 86/371 (23%), Positives = 145/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +   D  +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEDEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|167626353|ref|YP_001676853.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|226711043|sp|B0TYB0|ALR_FRAP2 RecName: Full=Alanine racemase
 gi|167596354|gb|ABZ86352.1| Alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 365

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/371 (22%), Positives = 149/371 (40%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L NN   +    GNA+    VK NAYG G E+I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLTNNIKIIREYVGNAKICFPVKANAYGHGIEEIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++   T +  +      +   E+++ +   + +                       + V
Sbjct: 63  FRVTAITKKPVLVFGVIYYEYLERMVSENIRVSIQDYDDIEKLEQIAKELNKKIYVHINV 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +       ++N K   L  + SHLACAD+     N+ Q +RF  ++ +
Sbjct: 123 NTGMNRMGVCYNDVCRTIKRAYNSKWIILEGVYSHLACADNRDHPTNAKQKKRFSEIVEY 182

Query: 189 ----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
                + I   L++S G L      + + RPGI +YG   +      ++    +    ++
Sbjct: 183 AKELSQDIICHLSNSYGFLGDKEICYDMVRPGILIYGFLPEFYVERSIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I +   G+ V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIIELEEGDGVGYSMIYRGFDGEKVAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +     +++VGD +++             +A    T  YD
Sbjct: 292 IDNVMYPMAGRMSMDGLTVSLGHNEHNVKVGDVVELISDIPRNRNSAFLMAKQVNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|320451536|ref|YP_004203632.1| alanine racemase [Thermus scotoductus SA-01]
 gi|320151705|gb|ADW23083.1| alanine racemase [Thermus scotoductus SA-01]
          Length = 366

 Score =  197 bits (500), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 89/368 (24%), Positives = 153/368 (41%), Gaps = 27/368 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              +++DL AL+ NW  + A +       V+K  AYG G   +A  L+  G +   V +V
Sbjct: 11  RAWIEVDLKALEANWLLLKAKARG-EVIPVLKAEAYGHGALPLARFLFQKGARWVAVATV 69

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
            EG  LR    +  I +L  +HP + + +   NL+P +S++      +      G++   
Sbjct: 70  SEGRTLREGGVEGEILLLGSLHPLEAEEVLRLNLLPTLSTLEAAQALAGRARALGLTPRA 129

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG NR+G   ++A D         +    +       ++D       VQ  RF+ 
Sbjct: 130 HLKVDTGMNRVGFPWEKAKDALLAVEALGIRVEGVYTHLATASED--EAFVEVQRSRFQR 187

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +             +S  LL      +  R G++LYG          ++ ++   AR  L
Sbjct: 188 VREALGEGYFYHLENSYGLLLHG--GENVRVGLALYGLIP----GFSLKPILRLLARPTL 241

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +++   G+ V YGG+        +    +GYADG P              F+ G    +G
Sbjct: 242 VKQLGPGDRVGYGGEYVARGGEWLLTLPVGYADGLPRG---------AVRFVKGP---EG 289

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD---DVALASGTTNYDLLVRI 361
            + P+ G+I+MD T       L +E    +++  PD         A A GT  Y++ V +
Sbjct: 290 GLYPVAGRISMDQTTVLSPGPLPLEA--VLEVLSPDFGPTGLCAWAEARGTIPYEVAVHL 347

Query: 362 GTRYAKFY 369
             R+ + Y
Sbjct: 348 SRRFPRVY 355


>gi|325291380|ref|YP_004267561.1| Alanine racemase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966781|gb|ADY57560.1| Alanine racemase [Syntrophobotulus glycolicus DSM 8271]
          Length = 407

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 87/353 (24%), Positives = 144/353 (40%), Gaps = 24/353 (6%)

Query: 7   LRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
           L +++DL A+ +N+  +   LS   R  AVVK +AYGLG   +A AL   G ++F VT+V
Sbjct: 4   LWIEVDLDAVVHNYWEIQKKLSPGTRCLAVVKADAYGLGAVAVAQALQEEGCREFAVTTV 63

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPY 124
           EEG  LR    +  I VL    P   +      L   +     +                
Sbjct: 64  EEGAILRENGIEGMILVLGPTRPADWESAIRKELSLSLPEASWVPLLEEICAKHHAEINV 123

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+++TG  R GL +             +  ++    +H A A    +     Q  +F +
Sbjct: 124 HLKIETGMGRTGLMVGILPQLAGFLQTARFVKVEGAFTHFARAAQRDNAYTKRQYGKFLS 183

Query: 185 LISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDK--INKSHPMQTVVT 237
                +G+        + +S+  L  P  H +  R G  L G         S  ++    
Sbjct: 184 ACERLEGLGINIPIKHVCNSAAFLDFPEMHHEFVRVGTLLLGHLPSQFFAGSIELKDPWK 243

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY-------PLTLSGLDSEH 290
           A+ARI+ IR+   G  V Y    +  +D+ +AV + GY DG+       P  L+ L    
Sbjct: 244 AKARILYIREVPKGTFVGYQSLYRCKKDTRLAVISAGYTDGFGVEPRLVPQGLADLMKII 303

Query: 291 SPSVFLGGKGF-------IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
             ++   G  +       + G  V + GKI M +T+ DI  +   + GD +++
Sbjct: 304 IKNIAAYGGIYLGREKLTLNGRPVKVAGKIGMQLTVLDIG-AAECQAGDIVEV 355


>gi|169656659|ref|YP_001428845.2| alanine racemase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|290953541|ref|ZP_06558162.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1]
 gi|295313145|ref|ZP_06803827.1| alanine racemase [Francisella tularensis subsp. holarctica URFT1]
 gi|189027647|sp|A7ND36|ALR_FRATF RecName: Full=Alanine racemase
 gi|164551727|gb|ABU61889.2| alanine racemase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 365

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNNRIIR 362


>gi|254369512|ref|ZP_04985523.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122466|gb|EDO66601.1| hypothetical protein FTAG_01386 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 365

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 84/371 (22%), Positives = 143/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I     P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVTYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|89256641|ref|YP_514003.1| alanine racemase [Francisella tularensis subsp. holarctica LVS]
 gi|167011039|ref|ZP_02275970.1| alanine racemase [Francisella tularensis subsp. holarctica FSC200]
 gi|254367956|ref|ZP_04983976.1| alanine racemase [Francisella tularensis subsp. holarctica 257]
 gi|122500527|sp|Q2A2P9|ALR_FRATH RecName: Full=Alanine racemase
 gi|89144472|emb|CAJ79777.1| alanine racemase [Francisella tularensis subsp. holarctica LVS]
 gi|134253766|gb|EBA52860.1| alanine racemase [Francisella tularensis subsp. holarctica 257]
          Length = 365

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|115315060|ref|YP_763783.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18]
 gi|122324934|sp|Q0BL88|ALR_FRATO RecName: Full=Alanine racemase
 gi|115129959|gb|ABI83146.1| alanine racemase [Francisella tularensis subsp. holarctica OSU18]
          Length = 365

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 143/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEYIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A    T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQINTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|187931921|ref|YP_001891906.1| alanine racemase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|226711044|sp|B2SHB9|ALR_FRATM RecName: Full=Alanine racemase
 gi|187712830|gb|ACD31127.1| alanine racemase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 365

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 85/371 (22%), Positives = 145/371 (39%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           LKI    L+NN   +    GNA+    VK NAYG G E I    ++  V  F V +  E 
Sbjct: 4   LKISKQTLRNNIKIIREYIGNAKMCFPVKANAYGHGIEDIVENTHDL-VDFFAVANSLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++        +      +   EK+I +   + +                       + +
Sbjct: 63  FRVTAVAKNPVLVFGVIYYEYIEKMISENIRVSIQDYEDIEKLEQIAKELDKKVYAHINI 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G++  +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVNYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVKF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++VGD +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVGDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|118497341|ref|YP_898391.1| alanine racemase [Francisella tularensis subsp. novicida U112]
 gi|195536029|ref|ZP_03079036.1| alanine racemase [Francisella tularensis subsp. novicida FTE]
 gi|226711045|sp|A0Q5X2|ALR_FRATN RecName: Full=Alanine racemase
 gi|118423247|gb|ABK89637.1| alanine racemase [Francisella novicida U112]
 gi|194372506|gb|EDX27217.1| alanine racemase [Francisella tularensis subsp. novicida FTE]
          Length = 365

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 144/371 (38%), Gaps = 24/371 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I    L+NN   +    G+A+    VK NAYG G E I    ++  V  F V +V E 
Sbjct: 4   LEISAQTLRNNIRIIKEYVGSAKICFPVKANAYGHGLELIVEHSHDL-VDFFAVANVLEA 62

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            ++     +  +      +   ++I+     + +                       + +
Sbjct: 63  FRVLDVVEKPVMIFGVIEYNYIDRILSKNIRVSIQDYNDIEKLEKFAKYYNKKPFVHVNL 122

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           +TG NR+G+   +A      ++      L  + SHLACAD+     N  Q  RF +++  
Sbjct: 123 NTGMNRMGVDYNDACRTIQRAYESDWLILEGVYSHLACADNRDHPTNIKQKNRFDSIVEF 182

Query: 189 YKG----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEAR 241
            KG    I   L++S G L      + + RPGI  YG   +      ++    +    ++
Sbjct: 183 TKGLSQDIICHLSNSYGFLGQKGICYDMVRPGILSYGFLPEFYVDRVIREIKPIARLLSK 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ I     GE V Y    +      +AV  IGY DG+P  L              G   
Sbjct: 243 VVKIITLQEGEGVGYSLIYRGFEGEQLAVIPIGYGDGFPRELGDR-----------GFVN 291

Query: 302 IKGYMVPILGKITMDMTMFDIT-DSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYD 356
           I   M P+ G+++MD     +  +   ++V D +++             +A  + T  YD
Sbjct: 292 INDVMYPMAGRMSMDGLTVSLGINEYDVKVSDTVELISAIPRNRNSAFSIAKQTNTIEYD 351

Query: 357 LLVRIGTRYAK 367
           ++  +  R  +
Sbjct: 352 IMSTLNDRIIR 362


>gi|206895841|ref|YP_002247535.1| alanine racemase [Coprothermobacter proteolyticus DSM 5265]
 gi|226711035|sp|B5Y9T8|ALR_COPPD RecName: Full=Alanine racemase
 gi|206738458|gb|ACI17536.1| alanine racemase [Coprothermobacter proteolyticus DSM 5265]
          Length = 348

 Score =  196 bits (497), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 81/366 (22%), Positives = 140/366 (38%), Gaps = 29/366 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             ++    LKNN   +     +    AVVKD+AYG     + P L   G+  F V   ++
Sbjct: 5   WAEVSRMNLKNNVELIRQKLPDLEPIAVVKDDAYGHDAAVVVPELLKNGITKFAVVYAKD 64

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
            + L  +  +  + +          +  +     +   +    + S  +   +   + L 
Sbjct: 65  ALMLSEFGAEWILVLDDPPLSN---MCSEYEKRGIRFCITDSKWLSDGL-LELPIKFHLF 120

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           VD G +R G+   E                 +         D  +       ERFR ++S
Sbjct: 121 VDVGMHREGVPWYETNTIREICKVVGNRLEGICSHLSNGLSDSQALATEE--ERFREVLS 178

Query: 188 -HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
              +G+   L++S+ +      +    RPGISLYG          ++ V++ +AR+I   
Sbjct: 179 IAPEGLMVHLSNSASLYNAKFPYATHFRPGISLYGYGYP-----GLKPVLSLKARVIHEH 233

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               GE +SYG   + T  + +    +GY DGY   LS      S +             
Sbjct: 234 ILEPGEGLSYGWTWRATEPTHVVTVPVGYGDGYNRKLSNKAIAGSKAGN----------- 282

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDLLVRIG 362
           +  +G +TMD TMF+     ++ VGD I + G         D++A   GT  Y++L  I 
Sbjct: 283 LQQIGTVTMDFTMFEAPK--NVTVGDEIVLMGEWEGGHFWADEMAQLVGTIPYEVLTSIN 340

Query: 363 TRYAKF 368
            R  + 
Sbjct: 341 PRVPRV 346


>gi|33596854|ref|NP_884497.1| alanine racemase, catabolic [Bordetella parapertussis 12822]
 gi|33573555|emb|CAE37547.1| alanine racemase, catabolic [Bordetella parapertussis]
          Length = 387

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/367 (19%), Positives = 131/367 (35%), Gaps = 24/367 (6%)

Query: 11  IDLTALKNNWHSMNALSG----NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ID  A+ +N   +    G      R  A VK +AYG G   + P L         V  + 
Sbjct: 19  IDPIAVAHNLEVLRQRLGVGVDGPRIWATVKADAYGHGLHNVLPGLRA--ADGIAVRHLH 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  + R    +  I V  G+   +E  +     + ++ +      +          P+  
Sbjct: 77  EAHQCRRVGWRGPIMVYAGLTHEREAALLTLQQLHLVITDMTQLEWLPGKPLYACAPWVW 136

Query: 127 QVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLERFRT 184
               G  R  GL   E           +       + HL   A+  S      +   F  
Sbjct: 137 LRYIGATRLGGLDAGEYRRAYARCRELQQHGALRGVGHLNHYANAASVGDLEREHADFEA 196

Query: 185 LISHYKGIEASLASSSGILL-GPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEA 240
            I    G  ++  S++  ++          RPG++LYG +    +      ++  +T  +
Sbjct: 197 CIRGLPGPVSTCNSAASCVMPTMAARTDWVRPGLALYGVSPIPGRVGRDLGLRPAMTLRS 256

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +   +   AG  V YG      +   + +   GY DGYP         H+P        
Sbjct: 257 TLCATQNLPAGASVGYGCAFVADQPMALGLVRCGYGDGYP---------HNPRASF--PV 305

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLLV 359
            + G +   +G+I+MD+   D+    +   G  + ++G P + ++ +A A+GT   +LL 
Sbjct: 306 QVDGVLTRTVGRISMDLMAVDLRPIPAAARGAPVVLWGSPQLPVEHIAHAAGTIAAELLT 365

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 366 GLTARVP 372


>gi|85374046|ref|YP_458108.1| alanine racemase [Erythrobacter litoralis HTCC2594]
 gi|84787129|gb|ABC63311.1| alanine racemase [Erythrobacter litoralis HTCC2594]
          Length = 348

 Score =  194 bits (493), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 112/364 (30%), Positives = 178/364 (48%), Gaps = 24/364 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             LRL ID  AL+ NW +++ LSG AR  A VK + YGLG +   P L +AG +DFFV  
Sbjct: 8   RTLRLDIDREALEANWRALDRLSGKARAGAAVKADCYGLGVDTCVPVLRDAGARDFFVAH 67

Query: 65  VEE-GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             E     R   P+    +       + +        PV++S+ Q   +          P
Sbjct: 68  WSEVADVARHVLPEQIAVLHGANTAEEAEYARSIGARPVVNSLHQANVWIDSGGG----P 123

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             + VDTG +RLG++  E         + ++     ++SHL+ AD+  + VN+ QLE FR
Sbjct: 124 CHMMVDTGIHRLGIAPSEVAANVIRQLDVQV-----LMSHLSSADE-DTPVNAAQLEAFR 177

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            L       E SLA+S+GI L  ++ F LTRPG+SLYGG  +   +  ++ V   +A II
Sbjct: 178 ALKGQLGAQELSLANSAGIGLNDDFAFDLTRPGLSLYGGVQRPELAEHIRQVAYPKAAII 237

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
            + +  AG+ V Y G+        +   ++GYADG+     G               + +
Sbjct: 238 QVAELRAGDHVGYNGEFTAPDAMRVGTVSLGYADGFLRAWGGKGLAL----------YHE 287

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  +P+LGK++MDM + D+     + VG ++ +      L   + A+G + Y+LL  +G 
Sbjct: 288 GRSLPLLGKVSMDMVVVDLAAEPDLSVGTWLDV---PYDLPRASEATGLSQYELLTILGQ 344

Query: 364 RYAK 367
           R+A+
Sbjct: 345 RFAR 348


>gi|224532829|ref|ZP_03673444.1| alanine racemase [Borrelia burgdorferi WI91-23]
 gi|224533969|ref|ZP_03674553.1| alanine racemase [Borrelia burgdorferi CA-11.2a]
 gi|224512218|gb|EEF82604.1| alanine racemase [Borrelia burgdorferi WI91-23]
 gi|224512805|gb|EEF83172.1| alanine racemase [Borrelia burgdorferi CA-11.2a]
          Length = 372

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 82/357 (22%), Positives = 149/357 (41%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++  I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVTFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 314 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|188501452|gb|ACD54585.1| alanine racemase-like protein [Adineta vaga]
          Length = 404

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 89/380 (23%), Positives = 150/380 (39%), Gaps = 30/380 (7%)

Query: 9   LKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVTSVE 66
           ++IDL A++ N     ++ +   +   +VK +AYG+G +KI         +    V    
Sbjct: 26  MRIDLNAMRCNLEQFCSVVASTTKMMMIVKASAYGVGIKKIGKWAEKTRLIDYLAVVYTA 85

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP--- 123
           EGV+LR       I ++  I     KI  + NL  VI S+  L      +          
Sbjct: 86  EGVELRKANIHLPIMIIN-IDKEDFKICQEYNLELVIYSISLLQQLMIWLEKNTQICSFP 144

Query: 124 -YALQVDTGFNRLGLSLQEAL---DFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
              ++++TG NRLGL + E     +        +L   S+     A  D       + Q 
Sbjct: 145 SIHVKINTGMNRLGLDIDEIPVFLNILFKYTRCRLMVKSIYTHVAASDDPQEDQYTADQT 204

Query: 180 ERFRTLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT-DKINKSHPMQ 233
             + + +          +   + +S GIL  PN HF + R G  LYG     +     + 
Sbjct: 205 RAYLSSVHILETGLGYTVLKHMCNSMGILRHPNLHFDMVRVGGGLYGAAECFLPYMSTLL 264

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             ++  + +  +R       + Y  + ++ RDS I +  +GYADG    L          
Sbjct: 265 PAISMISTVTQVRHVKKDSTIGYNRRGRVNRDSFIGILRLGYADGLRRQLGNGH------ 318

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE----VGDYIQIFGPDIKLDDVALA 349
               G  +I    V  +G I MD  M D+TD           + ++IFG    ++++A  
Sbjct: 319 ----GHVWIHDCRVSFIGSICMDFAMIDLTDVPIDNKYELENESVEIFGSHNNIEEIARC 374

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           S T  +D +  IG R  + Y
Sbjct: 375 SDTIVFDFISTIGKRVKRVY 394


>gi|15594505|ref|NP_212294.1| alanine racemase (alr) [Borrelia burgdorferi B31]
 gi|218249176|ref|YP_002374687.1| alanine racemase [Borrelia burgdorferi ZS7]
 gi|223889148|ref|ZP_03623737.1| alanine racemase [Borrelia burgdorferi 64b]
 gi|225549335|ref|ZP_03770308.1| alanine racemase [Borrelia burgdorferi 94a]
 gi|226321930|ref|ZP_03797455.1| alanine racemase [Borrelia burgdorferi Bol26]
 gi|6647402|sp|O51182|ALR_BORBU RecName: Full=Alanine racemase
 gi|226711027|sp|B7J192|ALR_BORBZ RecName: Full=Alanine racemase
 gi|2688050|gb|AAC66549.1| alanine racemase (alr) [Borrelia burgdorferi B31]
 gi|146743642|gb|ABQ43052.1| alanine racemase [Borrelia burgdorferi JD1]
 gi|146743644|gb|ABQ43053.1| alanine racemase [Borrelia burgdorferi]
 gi|218164364|gb|ACK74425.1| alanine racemase [Borrelia burgdorferi ZS7]
 gi|223885397|gb|EEF56498.1| alanine racemase [Borrelia burgdorferi 64b]
 gi|225370193|gb|EEG99633.1| alanine racemase [Borrelia burgdorferi 94a]
 gi|226232520|gb|EEH31274.1| alanine racemase [Borrelia burgdorferi Bol26]
 gi|312148518|gb|ADQ31177.1| alanine racemase [Borrelia burgdorferi JD1]
          Length = 372

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 314 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|119952958|ref|YP_945167.1| alanine racemase [Borrelia turicatae 91E135]
 gi|119861729|gb|AAX17497.1| alanine racemase [Borrelia turicatae 91E135]
          Length = 366

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 89/379 (23%), Positives = 159/379 (41%), Gaps = 25/379 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N+   + I+L  L+ N  ++          A +K +AYG G  +    L   G+  F
Sbjct: 1   MIKNK--EIIINLKNLEYNLTAIKNHIQKRELVATLKADAYGHGLIQTFKFLKEKGINYF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCG 119
            +  ++E +K++    +A + +         K +   ++ P ++    L+   +      
Sbjct: 59  GIFWIDEALKIKKIDKRANVLLYINTDKSAIKNLVKFDITPFVADSQYLSLIEQECRKQN 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VD G NR G+ ++ AL+      N KL +   + +HL   ++    +   Q+
Sbjct: 119 KKIKVHLKVDVGMNRYGIKIENALNLAMQIQNSKLVEFEGVCTHLPTTENR--KITQAQI 176

Query: 180 ERFRTLISH--YKGIEASLASSSGILLGPNYH----FQLTRPGISLYGGTDKINKSHPMQ 233
           E+F   I+    K I+     +S      NY     F + RPG+ LYG     N  +   
Sbjct: 177 EKFVHFINELKTKNIKPKFIHASNSEHITNYPISEKFNMVRPGLILYGYHPNSNSLNNNL 236

Query: 234 T---VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
               V++  ++II ++K    E +SY G      D  I +  +GY DG P   S      
Sbjct: 237 QLKPVLSLYSKIIFLKKIKKDEQISYSGLFTAKEDMQIGLLPVGYFDGIPQNTSN----- 291

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                      I+     I GKI M++++ +I   L I +G+ ++I    + LD ++  S
Sbjct: 292 ------NFYCIIRDKKCFIRGKICMNISIIEIPKDLKINIGEKVEITSERLSLDILSKES 345

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           G + Y++L  IG    K Y
Sbjct: 346 GMSKYEILCSIGKHEKKKY 364


>gi|323341783|ref|ZP_08082016.1| alanine racemase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464208|gb|EFY09401.1| alanine racemase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 375

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 154/372 (41%), Gaps = 25/372 (6%)

Query: 11  IDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +D   + NN   +  +     +  AV+K N YG G  ++A       +    V ++E+  
Sbjct: 9   VDEQRILNNTLKLREIIKPETKIIAVIKANGYGCGLVEVAHTCEKMKIDVLAVLNIEQAR 68

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYALQV 128
            LR +     I +L        K + + +L+ VI +       ++  +  GV     ++V
Sbjct: 69  DLRKHGITTPILLLGATLESNFKYLIEYDLMQVIINHDYALKLNQFGLDHGVKVKTHVKV 128

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           DTG +RLG+   + +   +     ++  +          +  +   + +QL+R++ +I  
Sbjct: 129 DTGLHRLGMEDYDEIKSCYGLEGLEVCGIYSHFVEAQSYEGDAVAFSMLQLDRYKAVIDK 188

Query: 189 -----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAE 239
                       + +S  IL   +  F   R G+ ++G       +++ +   + V++ E
Sbjct: 189 LRHDGIDPKMTHIQNSPSILNFGDLGFDAVRCGMIMFGLYHPSQLEMSLNDGYEPVLSFE 248

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +R+ ++R+   GE V YG   +   D ++A  + GY DG   +LS            GG 
Sbjct: 249 SRVCMVRELKKGEFVGYGRTFQAEDDMMLATVSAGYCDGVMKSLS----------LNGGH 298

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-IKLDD-VALASGTTNYDL 357
             I   + PI+G I M   M D+T      + D + +FG +   + D + +   + N +L
Sbjct: 299 VVINDTLCPIVGDIAMSQFMVDVTGVP-CNLEDRVILFGHEKQTIYDYIGITGQSIN-EL 356

Query: 358 LVRIGTRYAKFY 369
           +  I     + Y
Sbjct: 357 ISHILYDIPRIY 368


>gi|323342193|ref|ZP_08082425.1| alanine racemase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463305|gb|EFY08499.1| alanine racemase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 356

 Score =  193 bits (490), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/364 (21%), Positives = 149/364 (40%), Gaps = 29/364 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
             I+L  L  N + +  ++G +    VVK NAYG G  + +  +    +    V+S++E 
Sbjct: 8   ATINLDNLSYNINKIQEVTGKS-LFGVVKANAYGHGDVECSRIMIEENLPFICVSSIDEA 66

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            +L        I +   + P   KII +      I ++P + ++ ++ +  ++    L++
Sbjct: 67  QRLVHKGINYDILIFSYVDP---KIIAEQGKEHFIYTIPSIQWFREVTALNLNLRMHLEI 123

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS- 187
           + G NR+G+   + ++            L  I +HL   ++        QL RF  +I+ 
Sbjct: 124 NVGMNRIGIKNDKEIEEIL----SSDVPLEGIYTHLPSPENLEKG--KEQLTRFENIINA 177

Query: 188 -HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
                    + ++   L+  N      R G+++YG    I    P   V++  ++I  I 
Sbjct: 178 SERNFKWIHVGNAPVSLIKDNTLINGFRMGLAVYGYRVDIPSLKP---VLSLHSKICHID 234

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +   GE + Y     + +        IGYAD +                     +IKG  
Sbjct: 235 RVNPGESIGYDYTYLVEKKEYFGTMPIGYADCF------------DVRNNLVPVYIKGKP 282

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
             I+GKI MD TM  I    S+ +GD +++ GP     ++   +G + Y  L  +  R  
Sbjct: 283 YSIVGKICMDQTMIRI--DESVYLGDEVELIGPHRTCVEIESITGISKYIQLSTLSERIT 340

Query: 367 KFYT 370
           + YT
Sbjct: 341 RHYT 344


>gi|33600629|ref|NP_888189.1| alanine racemase, catabolic [Bordetella bronchiseptica RB50]
 gi|33568229|emb|CAE32141.1| alanine racemase, catabolic [Bordetella bronchiseptica RB50]
          Length = 387

 Score =  192 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 71/367 (19%), Positives = 130/367 (35%), Gaps = 24/367 (6%)

Query: 11  IDLTALKNNWHSMNALSG----NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ID  A+ +N   +    G      R  A VK +AYG G   + P L         V  + 
Sbjct: 19  IDPIAVAHNLEVLRQRLGVGVDGPRIWATVKADAYGHGLHNVLPGLRA--ADGIAVRHLH 76

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  + R    +  I V  G+   +E  +     + ++ +      +          P+  
Sbjct: 77  EAHQCRRVGWRGPIMVYAGLTHEREAALLTLQQLHLVITDMTQLEWLPGKPLYACAPWIW 136

Query: 127 QVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHL-ACADDPSSHVNSVQLERFRT 184
               G  R  GL   E           +       + HL   A+  S      +   F  
Sbjct: 137 LRYIGATRLGGLDAGEYRRAYARCRELQQHGALRGVGHLNHYANAASVGDLEREHADFEA 196

Query: 185 LISHYKGIEASLASSSGILL-GPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEA 240
            I    G  ++  S++  ++          RPG++LYG +    +      ++  +T  +
Sbjct: 197 CIRGLPGPVSTCNSAASCVMPTMAARTDWVRPGLALYGVSPIPGRVGRDLGLRPAMTLRS 256

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            +   +   AG  V YG      +   + +   GY DGYP         H+P        
Sbjct: 257 TLCATQNLPAGASVGYGCAFVADQPMALGLVRCGYGDGYP---------HNPRASF--PV 305

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALASGTTNYDLLV 359
            + G +   +G+I+MD+   D+    +   G  + ++G P + ++ +A A+ T   +LL 
Sbjct: 306 QVDGVLTRTVGRISMDLMAVDLRPIPAAARGAPVVLWGSPQLPVEHIAHAADTIAAELLT 365

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 366 GLTARVP 372


>gi|223670745|dbj|BAH22617.1| alanine racemase [Marsupenaeus japonicus]
          Length = 421

 Score =  192 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 83/380 (21%), Positives = 146/380 (38%), Gaps = 31/380 (8%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + ++L A+  N   +  LS        VVK  AYG G   +   L   GV++  V +V E
Sbjct: 39  IHVNLDAVALNVDILKGLSSPKTEIMGVVKGGAYGSGLLPVVEVLLEKGVRELAVATVAE 98

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS---VPQLTFYSKLMSCGVSHPY 124
           G+ LR +     I +L  + P +   +   NLIP +S    +  +   S +   G     
Sbjct: 99  GLYLRRHGINVPITILGNLVPCEVSDVTQHNLIPSLSWSQALMSVPRESLVYPDGSRLKV 158

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           A+ +DTG +R G+  ++      +  + ++  LS+     +   +     N  QL+ F +
Sbjct: 159 AINIDTGMSRYGVQPEDLPALVQDLDDLEVTILSMYTHFQSAITEREK--NQKQLDLFLS 216

Query: 185 LIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------HPMQTV 235
                  +GI   +A+++G + G        RPG ++ G     +K           Q  
Sbjct: 217 ASEPYKCRGITRHVAATTGCVQGLGTDLDFIRPGGAITGLCSGSDKEGTNQFAKKRFQPA 276

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
            +  AR    +   AG  V Y G    + D  IA  + G++DG    LS           
Sbjct: 277 FSVIARPTFYKLLGAGRHVGYDGTYTTSEDEWIANFSTGWSDGLSRRLSNGVGAVRRIST 336

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI--QI---FGPDIKLDDVALAS 350
                   G   PI+G+++MD     + +     + D +   +   +        +A   
Sbjct: 337 --------GERCPIVGRVSMDSITVRLPEQP---LPDEVFQVLTDDYDEVTSAVGMARNL 385

Query: 351 GTTNYDLLVRIGTRYAKFYT 370
           G   Y++     TR  + YT
Sbjct: 386 GGATYEIPGNWSTRLPRLYT 405


>gi|257126443|ref|YP_003164557.1| alanine racemase [Leptotrichia buccalis C-1013-b]
 gi|257050382|gb|ACV39566.1| alanine racemase [Leptotrichia buccalis C-1013-b]
          Length = 390

 Score =  192 bits (489), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 155/391 (39%), Gaps = 49/391 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+I+   L+ N   +  ++ N     V+KDNAYGLG   I P L       F V  ++E 
Sbjct: 5   LEINKENLEKNLEKIRFINKN--IICVIKDNAYGLGIGNILPILIENNCNYFAVAYIDEA 62

Query: 69  VKLRLYTP--------------QARIFVLYGIHPGQEKIIFDTN---LIPVISSVPQLTF 111
           +K+R                  + +I  L  I P + +   + +    I   S +     
Sbjct: 63  IKIREILKNFEKEKKLKFLENRKIKIMALNYIKPKKLEYAIENDVELTIFNFSQLSDYLK 122

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC----A 167
             +           ++V++G NRLG +  E L+        ++   +  +  ++     +
Sbjct: 123 ILEESFENTVLKIHIKVNSGMNRLGFNESEILELIEKIKKYEINSKNNKLEIISIFSHIS 182

Query: 168 DDPSSHVNSVQLERFRTLIS--HYKGIEASLASS-SGILLGP---NYHFQLTRPGISLYG 221
           D  +      Q+E++  ++       ++       +  LL      Y++   R G++LYG
Sbjct: 183 DAENQLETEKQVEKYENILKIFDKNNVKYQYKHLQASPLLFKYEEKYNYDFARVGMALYG 242

Query: 222 GTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
               +     +  V+T +++II IR     + +SYG +  + RDS I + +IGYA G   
Sbjct: 243 MEP-LFYDVGLLDVITVKSQIINIRNVKKNDKISYGSKGVVKRDSKIGIVSIGYAHGLQK 301

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD- 340
            +                  + G    I+G+I MDM   D+TD   +E+ D + I G   
Sbjct: 302 QIENSQE---------AYVLVNGKKAKIVGEICMDMIFVDLTDINDVEINDKVVIVGSQR 352

Query: 341 ---------IKLDDVALASGTTNYDLLVRIG 362
                    I L  VA  +GT   D+L +  
Sbjct: 353 NVENGVNERITLRQVARWAGTIQDDVLTKFS 383


>gi|193077032|gb|ABO11785.2| alanine racemase [Acinetobacter baumannii ATCC 17978]
          Length = 430

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 24/348 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             +++D  A ++N    N L +G  +   V+K NAYG   + + P++    V    +TS 
Sbjct: 47  AWIEVDTQAFEDNIKRTNQLLNGKTQLCVVMKANAYGHSIDLLMPSVMKLNVSCIGITSN 106

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E   +R +  + +I  L      +       N+  ++ +  Q T  SK      +  + 
Sbjct: 107 AEAAMVRKHGYKGKITRLRTATDSEIINAHALNIEELLGNYDQATRISKWAEANNTTVHY 166

Query: 126 L----QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
                      N L +S  +  +           ++  I++H A  D+       +  N 
Sbjct: 167 SLALNSGGMDRNGLEMSTAQGKEQAVAITKLPNLKIDGIMTHYAVEDEKYVRERLAQFNE 226

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + K +    A+S   +  P  H  + R G  +YG      +    + ++
Sbjct: 227 QTAWLIKKAKLNRKELTLHTANSFATVNVPESHLDMVRAGAIIYGDFPNHPE---YKRMM 283

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + +I  +   L G  V Y     LTRDS +A   +GY+DGY  + S            
Sbjct: 284 AFKTQIAAVNNYLKGSTVGYDQTYTLTRDSKLANLPVGYSDGYRRSFSN----------- 332

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                + G   P++G+++M+  M D+TD    + GD + +FG     +
Sbjct: 333 KAFVLVNGQKAPVVGRVSMNTVMVDVTDIPEAKAGDEVVLFGRQGNAE 380


>gi|332286614|ref|YP_004418525.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
 gi|330430567|gb|AEC21901.1| alanine racemase, catabolic [Pusillimonas sp. T7-7]
          Length = 388

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 71/378 (18%), Positives = 130/378 (34%), Gaps = 29/378 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNAR------TAAVVKDNAYGLGCEKIAPALYNAGV 57
           +      ID TA+++N + +  L    +        AV K +AYG   E     L     
Sbjct: 22  HNSPLALIDHTAIRHNLNRLRQLLAYPKTLPTPLIWAVAKADAYGHTLEHAYAGLCE--A 79

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
               V +++E    R       I  +         +      L  +I    QL     L 
Sbjct: 80  DGLAVLTLDEARHCRSLGWTGPILAMSAQITQAALEDPILYPLHLIIDHQEQLAAIQSLR 139

Query: 117 SCGVSHPYALQVD--TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                H +                 + A     +            + H A A++    +
Sbjct: 140 PPFSPHVWLRYRGRLNHAGFDQAGYKSAYASLQSGLRDGRLAELGHLQHYATAEEAEPML 199

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQ-LTRPGISLYGGTDKIN---KSH 230
              Q   F+ LI    G   +  S++ +            R GI+LYG +       K  
Sbjct: 200 AERQA--FQLLIEGLPGPVCTDNSAALLSDHSGAALTSWVRSGIALYGISPLAGLNGKDL 257

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++  +  +A +   +   AG+ + YG     +R + + +   GYA GYP ++       
Sbjct: 258 GLRPAMVLQAPLYGFQTLQAGDSLGYGSTFLASRKTRVGLVRCGYAHGYPRSI------- 310

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG-PDIKLDDVALA 349
                 G +  + G M  I+G+++MD    D+TD      G  + ++G P++ ++ VA  
Sbjct: 311 ----PEGCEVMVTGRMATIIGRVSMDTLTIDLTDHPDAGYGTVVTLWGTPELPIEVVAAQ 366

Query: 350 SGTTNYDLLVRIGTRYAK 367
           + T    L   +  R  +
Sbjct: 367 ANTIPAQLCTALTERVPR 384


>gi|296284109|ref|ZP_06862107.1| alanine racemase [Citromicrobium bathyomarinum JL354]
          Length = 365

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 113/361 (31%), Positives = 178/361 (49%), Gaps = 23/361 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL ID  AL +NW +++ LSG AR  A VK + YGLG +   PAL  AG +DFFV    
Sbjct: 13  LRLAIDTAALAHNWRALDRLSGTARAGAAVKADCYGLGTQNCVPALVEAGARDFFVAHWS 72

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E   +  +    ++ VL+G+  G+E        +  + +             G      L
Sbjct: 73  EVAPVLDHVAPQQVAVLHGVMTGEEARYAIATGVRPVINSLHQAKVWLDAGGGT---CNL 129

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTG NRLGL+  E  D            + +++SHL+ A++  S  N  QL  FR   
Sbjct: 130 MVDTGINRLGLAPTELSDPL-----LARLDVQVLMSHLSSAEEH-SAANGHQLAAFRAAQ 183

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     E S+A+S+GI LG +Y   LTRPG++LYGG    + +  ++ V   +A II +R
Sbjct: 184 ALLPHRETSIANSAGIALGRDYSCDLTRPGLALYGGVPTPDLAGHIRQVAFPQAAIIHVR 243

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
           +  AG+ V Y  +   +    +   ++GYADG+  +               G    +G  
Sbjct: 244 RIEAGDAVGYNREFTASGPMRVGTVSLGYADGFLRSWG-----------AKGFLRHQGRT 292

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           + +LGK++MDM + D+  +  ++VGD++ +      L D A  SG + Y+LL  +G R+ 
Sbjct: 293 LRLLGKVSMDMVVVDLAQAPDLDVGDWLDV---PYHLPDAAQHSGLSQYELLTTLGHRFE 349

Query: 367 K 367
           +
Sbjct: 350 R 350


>gi|317471394|ref|ZP_07930748.1| alanine racemase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316901145|gb|EFV23105.1| alanine racemase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 294

 Score =  192 bits (488), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 25/290 (8%)

Query: 94  IFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYALQVDTGFNRLGLSL-QEALDFTHNSFN 151
           +    +   + S       SK            ++VDTG NR+G    +E++        
Sbjct: 1   MIQHEIEQTVFSYEMAEAISKFAVTMKKDARIHIKVDTGMNRIGFKPTEESVGQVQRIQK 60

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHY--KGIEA---SLASSSGILLGP 206
               ++  I +H ACAD+        Q E F   +S    KGIE     +++S+ I+   
Sbjct: 61  LPNIKIQGIFTHFACADEKDKTSARHQKELFDQFVSKIEEKGIEIPVKHVSNSAAIMDLR 120

Query: 207 NYHFQLTRPGISLYGGTDKINKSHPMQ---TVVTAEARIILIRKALAGELVSYGGQKKLT 263
                + R GI  YG                 ++  + +I +++   GE VSYG      
Sbjct: 121 ECRMDMVRSGIITYGLYPSEEVDKSAIDLKPALSLISHVIHVKEVGPGEGVSYGSTFVTD 180

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
           R + IA   +GYADGYP  LS             G+  I+G   PI+G+I MD  M D+T
Sbjct: 181 RKTRIATIPVGYADGYPRALSSR-----------GRVIIRGQYAPIIGRICMDQFMVDVT 229

Query: 324 DSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D   + V D + + G     +I +++ A  +G+ NY+ +  IG R  + Y
Sbjct: 230 DIEGVSVMDRVTLVGTEGDKNISVEEAADLAGSFNYEFVCGIGKRVPRVY 279


>gi|126641403|ref|YP_001084387.1| alanine racemase [Acinetobacter baumannii ATCC 17978]
          Length = 409

 Score =  192 bits (487), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 134/348 (38%), Gaps = 24/348 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             +++D  A ++N    N L +G  +   V+K NAYG   + + P++    V    +TS 
Sbjct: 26  AWIEVDTQAFEDNIKRTNQLLNGKTQLCVVMKANAYGHSIDLLMPSVMKLNVSCIGITSN 85

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            E   +R +  + +I  L      +       N+  ++ +  Q T  SK      +  + 
Sbjct: 86  AEAAMVRKHGYKGKITRLRTATDSEIINAHALNIEELLGNYDQATRISKWAEANNTTVHY 145

Query: 126 L----QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
                      N L +S  +  +           ++  I++H A  D+       +  N 
Sbjct: 146 SLALNSGGMDRNGLEMSTAQGKEQAVAITKLPNLKIDGIMTHYAVEDEKYVRERLAQFNE 205

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + K +    A+S   +  P  H  + R G  +YG      +    + ++
Sbjct: 206 QTAWLIKKAKLNRKELTLHTANSFATVNVPESHLDMVRAGAIIYGDFPNHPE---YKRMM 262

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + +I  +   L G  V Y     LTRDS +A   +GY+DGY  + S            
Sbjct: 263 AFKTQIAAVNNYLKGSTVGYDQTYTLTRDSKLANLPVGYSDGYRRSFSN----------- 311

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                + G   P++G+++M+  M D+TD    + GD + +FG     +
Sbjct: 312 KAFVLVNGQKAPVVGRVSMNTVMVDVTDIPEAKAGDEVVLFGRQGNAE 359


>gi|195941892|ref|ZP_03087274.1| alanine racemase (alr) [Borrelia burgdorferi 80a]
          Length = 372

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 81/357 (22%), Positives = 148/357 (41%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++  I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVTFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++ + +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 314 VCMNLAIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|146743652|gb|ABQ43057.1| alanine racemase [Borrelia bissettii]
          Length = 366

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    GN    A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGNKEIVATLKGDAYGHGLINIFKFLKSKKINYFGLSNIEDAKTLKKIDKNIKILI 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELVPFVADFEYLFLIEKECALQKNKLKVHLKIDIGMNRYGIKIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS--HYKGIEASLASS 199
           AL+      N K  +L  + SHL   +D        Q+E+F   +     K I       
Sbjct: 141 ALEIATYIQNSKFLELEGVCSHLPSTEDF--KTTQKQIEQFLFFLEKLKQKNINPKFVHI 198

Query: 200 SGILLGPNY----HFQLTRPGISLYGGTDK---INKSHPMQTVVTAEARIILIRKALAGE 252
           S      +Y     F + RPG+ LYG          +   + V++  +++I I+    GE
Sbjct: 199 SNSGHIIDYKLSSQFNMIRPGLILYGYCPSSKNKKLALNFKPVLSLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 259 KISYSGTFQAKEDIKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L ++ G  ++I    + +D+++  S  +NY+LL  IG    K Y
Sbjct: 308 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSNYELLCNIGKYEKKKY 364


>gi|221217500|ref|ZP_03588971.1| alanine racemase [Borrelia burgdorferi 72a]
 gi|225549860|ref|ZP_03770822.1| alanine racemase [Borrelia burgdorferi 118a]
 gi|221192778|gb|EEE18994.1| alanine racemase [Borrelia burgdorferi 72a]
 gi|225369551|gb|EEG99002.1| alanine racemase [Borrelia burgdorferi 118a]
          Length = 372

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/357 (22%), Positives = 149/357 (41%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  I     + Y
Sbjct: 314 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIAKYEKRKY 370


>gi|216264434|ref|ZP_03436426.1| alanine racemase [Borrelia burgdorferi 156a]
 gi|215980907|gb|EEC21714.1| alanine racemase [Borrelia burgdorferi 156a]
          Length = 372

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/357 (22%), Positives = 149/357 (41%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++ + +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 314 VCMNLAIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|300724984|ref|YP_003714309.1| putative alanine racemase [Xenorhabdus nematophila ATCC 19061]
 gi|297631526|emb|CBJ92233.1| putative alanine racemase [Xenorhabdus nematophila ATCC 19061]
          Length = 410

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 80/363 (22%), Positives = 145/363 (39%), Gaps = 27/363 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++    ++I+ T  +NN H +   L+ N +  AV+K +AYG G   + P++   GV    
Sbjct: 39  AHNNAWVEINTTTFENNIHILQQKLNRNTKMCAVLKGDAYGHGIGLLMPSVIKTGVLCVG 98

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGV 120
           +TS EE   +R    + ++  +      + +     ++  +I  +      + L    G 
Sbjct: 99  ITSNEEARIVRESGFKGQLIRIRTADVSEIESTLGYDMEEIIGDLAHAKTVADLAKKHGK 158

Query: 121 SHPYALQVDTG---FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-----DPSS 172
                L ++TG    N L +  ++              +L  I+SH A  D     D   
Sbjct: 159 EIRVHLALNTGLMSRNGLEMKTEQGKQEALKMTQLPNLKLVGIMSHHALTDLDAIRDSIK 218

Query: 173 HVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
           + N       +        I    +SS   +  P   F + R G +LYG     N     
Sbjct: 219 NFNEQTAWLIKAANLKRDEITLHASSSFASVSIPEAQFDMVRVGSALYGIL--TNTHPEF 276

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + ++  +  +  ++    G  VSY     L RDS +A   +G++DG+  +LS        
Sbjct: 277 KPLIQVKTHVASVKSYPKGNGVSYNNTYILKRDSKLANLPVGFSDGFSSSLSN------- 329

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVAL 348
                    I G+  P++G ++M+  M D+TD   ++ GD + IFG     +I   D+  
Sbjct: 330 ----KAYVLINGHRAPVVGSVSMNTVMADVTDLPEVKSGDEVVIFGKQGNEEITQSDIQK 385

Query: 349 ASG 351
             G
Sbjct: 386 WGG 388


>gi|289674439|ref|ZP_06495329.1| alanine racemase [Pseudomonas syringae pv. syringae FF5]
          Length = 271

 Score =  190 bits (483), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 81/273 (29%), Positives = 119/273 (43%), Gaps = 6/273 (2%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  A    F V  
Sbjct: 2   RPARAFIDLQALRHNYQLARENSGG-KALAVVKADAYGHGAVRVAQAL-QAQADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE ++LR    +A + +L G     E      + +  +          +    G     
Sbjct: 60  IEEALELRAAGIRAPVLLLEGFFEADELAQIVEHDLWTVVHATWQLEAIEQARLGKPITV 119

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L++DTG +R+GL   E                 +++SH + AD+ +S  +  QL  F T
Sbjct: 120 WLKLDTGMHRVGLHPHEYQAGYQRLLATGKVARIVLMSHFSRADELNSGCSDEQLAVFET 179

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEAR 241
                   E SL +S  +L  P      +RPGI LYG T           +Q V+T E++
Sbjct: 180 F-RKGLAAETSLKNSPAVLGWPQIPSDWSRPGIMLYGATPFDQAHPLADRLQPVMTLESK 238

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIG 274
           II +R+   GE V YG      R S I V A+G
Sbjct: 239 IISVRELPVGEPVGYGATFVCDRPSRIGVVAMG 271


>gi|325121779|gb|ADY81302.1| alanine racemase [Acinetobacter calcoaceticus PHEA-2]
          Length = 430

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 75/348 (21%), Positives = 133/348 (38%), Gaps = 24/348 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++ID  A ++N    N L +G  +   V+K NAYG   + + P++    V    +TS 
Sbjct: 47  AWIEIDTQAFEDNIKRTNQLLNGKTQLCIVMKANAYGHSIDLLMPSVMKLNVSCIGITSN 106

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS--HP 123
            E   +R +  + +I  L      +       N+  ++ +  Q    SK      +  H 
Sbjct: 107 AEAAMVRKHGYKGKITRLRTATDSEIINAQALNIEELLGNYDQAARMSKWAEANNTTVHY 166

Query: 124 YALQVDTGFNRLGLSLQEAL--DFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
                  G +R GL +  AL  +           ++  I++H A  D+       +  N 
Sbjct: 167 SLALNSGGMDRNGLEMSTALGKEQAVAITKLPHLKIDGIMTHYAVEDEKFVRERLAQFNE 226

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + K +    A+S   +  P  H  + R G  +YG      +   M   +
Sbjct: 227 QTAWLIKKAKLNRKELTLHTANSFATVNVPESHLDMVRAGAIIYGDFPNHPEFKGM---M 283

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + +I  +   L    V Y     L RDS +A   +GY+DGY  + S            
Sbjct: 284 AFKTQIAAVNNYLKDSTVGYDQTYTLKRDSKLANLPVGYSDGYRRSFSN----------- 332

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                I G   P++G+++M+  M D+TD    + GD + +FG     +
Sbjct: 333 KAFVLINGQKAPVVGRVSMNTVMVDVTDIPEAKAGDEVVLFGRQGNAE 380


>gi|225552449|ref|ZP_03773389.1| alanine racemase [Borrelia sp. SV1]
 gi|225371447|gb|EEH00877.1| alanine racemase [Borrelia sp. SV1]
          Length = 372

 Score =  190 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/357 (22%), Positives = 148/357 (41%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKKINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVADFEYLFSIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N K  +L  + SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGVCSHLPSTENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    +  F + RPG+ LYG         P    + V++  ++II I+    GE
Sbjct: 205 SNSGHIINYKLSPQFNMVRPGLILYGYCQSPKNKKPALNFKPVLSLFSKIIFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 265 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++ + +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 314 VCMNLAIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|146743646|gb|ABQ43054.1| alanine racemase [Borrelia burgdorferi N40]
 gi|312149466|gb|ADQ29537.1| alanine racemase [Borrelia burgdorferi N40]
          Length = 372

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 81/355 (22%), Positives = 145/355 (40%), Gaps = 19/355 (5%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKKINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSG 201
           AL+      N K  +L  I SHL   ++  +    ++   F       K I      +S 
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENFKTTQKQIEQFLFFLETLKQKNIHPKFVHTSN 206

Query: 202 ILLGPNY----HFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGELV 254
                NY     F + RPG+ LYG    +    P    + V++  +++  I+    GE +
Sbjct: 207 SGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVTFIKNVKKGEKI 266

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314
           SY G  +   D  I +  IGY DG P  +S                 I      I GK+ 
Sbjct: 267 SYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGKVC 315

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           M++T+ +I   L ++ G  ++I    + +++++  S  ++Y+LL  IG    + Y
Sbjct: 316 MNLTIVEIPKDLKVKTGSKVEIVSEKLSINEMSKFSKRSHYELLCNIGKYEKRKY 370


>gi|290476786|ref|YP_003469697.1| Alanine racemase 2 [Xenorhabdus bovienii SS-2004]
 gi|289176130|emb|CBJ82935.1| Alanine racemase 2 [Xenorhabdus bovienii SS-2004]
          Length = 410

 Score =  189 bits (481), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 74/359 (20%), Positives = 144/359 (40%), Gaps = 27/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++I+ T  +NN H++   L+ + +   V+K +AYG G + + P++   G+    +TS 
Sbjct: 43  AWVEINTTTFENNIHTLQSKLTKDTKVCVVLKGDAYGHGIDLLMPSVIKTGMPCVGITSN 102

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPY 124
           EE   +R    + ++  +      + +     ++  ++  +       +     G +   
Sbjct: 103 EEARIVRESGFKGQLMRIRAAAVTEIESTLGYDMEEMVGDLEHAKTIDALAKKHGKAIRV 162

Query: 125 ALQVDTGF---NRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-----DPSSHVNS 176
            L ++TG    N L +  ++              +L  ++SH A  D     +  +    
Sbjct: 163 HLVLNTGRMSRNGLEMKTEQGKQEALKIAQLPNLKLVGMMSHYALKDLDAIREGVNDFKE 222

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +T       I    +SS   +  P   F + R G +LYG  +          ++
Sbjct: 223 QTAWLIKTANLKRNEIILHASSSYASIRVPEAQFDMVRVGSALYGILNPEYPEFKP--LI 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + R+  ++    G  VSY     L RDS +A   IG++DG+  +LS            
Sbjct: 281 QVKTRVASVKPYPKGNGVSYDNTYILKRDSKLANLPIGFSDGFSSSLSN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
                I G+  P++G ++M+  M D+TD   ++ GD + IFG     +I   D+    G
Sbjct: 330 KAFVLINGHRAPVVGLVSMNTVMVDVTDLPDVKSGDEVVIFGKQGKEEITQSDIQKWGG 388


>gi|146743624|gb|ABQ43043.1| alanine racemase [Borrelia burgdorferi]
          Length = 358

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 23/351 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 81  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 141 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 199 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 259 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG+
Sbjct: 308 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGS 358


>gi|146743632|gb|ABQ43047.1| alanine racemase [Borrelia burgdorferi]
          Length = 361

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 82/351 (23%), Positives = 148/351 (42%), Gaps = 23/351 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 23  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 82

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 83  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 142

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 143 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 200

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 201 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 260

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 261 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 309

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG 
Sbjct: 310 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGN 360


>gi|293608485|ref|ZP_06690788.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829058|gb|EFF87420.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 430

 Score =  189 bits (480), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 75/348 (21%), Positives = 133/348 (38%), Gaps = 24/348 (6%)

Query: 7   LRLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++ID  A ++N    N L +G  +   V+K NAYG   + + P++    V    +TS 
Sbjct: 47  AWIEIDTQAFEDNIKRTNQLLNGKTQLCIVMKANAYGHSIDLLMPSVMKLNVSCIGITSN 106

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS--HP 123
            E   +R +  + +I  L      +       N+  ++ +  Q    SK      +  H 
Sbjct: 107 AEAAMVRKHGYKGKITRLRTATDSEIINAQALNIEELLGNYDQAARMSKWAEANNTTVHY 166

Query: 124 YALQVDTGFNRLGLSLQEAL--DFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNS 176
                  G +R GL +  AL  +           ++  I++H A  D+       +  N 
Sbjct: 167 SLALNSGGMDRNGLEMATALGKEQAVAITKLPHLKIDGIMTHYAVEDEKFVRERLAQFNE 226

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +    + K +    A+S   +  P  H  + R G  +YG      +   M   +
Sbjct: 227 QTAWLIKKAKLNRKELTLHTANSFATVNVPESHLDMVRAGAIIYGDFPNHPEFKGM---M 283

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             + +I  +   L    V Y     L RDS +A   +GY+DGY  + S            
Sbjct: 284 AFKTQIAAVNNYLKDSTVGYDQTYTLKRDSRLANLPVGYSDGYRRSFSN----------- 332

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD 344
                I G   P++G+++M+  M D+TD    + GD + +FG     +
Sbjct: 333 KAFVLINGQKAPVVGRVSMNTVMVDVTDIPEAKAGDEVVLFGHQGNAE 380


>gi|297618459|ref|YP_003703618.1| alanine racemase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146296|gb|ADI03053.1| alanine racemase [Syntrophothermus lipocalidus DSM 12680]
          Length = 400

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 136/359 (37%), Gaps = 25/359 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           M +N    +++D+ AL +N  ++ +L   N R  AV+K NAYGLG    A  L   GV  
Sbjct: 4   MPNNR--WIEVDIDALVHNLEAVRSLLKENTRLIAVLKANAYGLGAVGTARVLARHGVDY 61

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
           F VT  EE  +LR       I V       + +   +  L   ++S       S+     
Sbjct: 62  FAVTFPEEAFELREGGISTDILVFAPAGEREIEKAVEQGLTLTVASYRDYRLASEAASRF 121

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L++DTG  R G++   AL+        +   L  + +H A A   S      Q
Sbjct: 122 NKKVRIHLKIDTGLGRFGVTADRALELARLIHYDQWLVLEGLYTHFAEAGARSPKFTQSQ 181

Query: 179 LERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD--KINKSHP 231
            E+ +  +     +  +       +S+  L  P  H    R G  L G      +     
Sbjct: 182 FEQLQKTVDALTSNGIRPALIHCCNSAAALRFPEMHLDAVRIGTLLGGQHPAGHVPNKIK 241

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG-----YPLTLSGL 286
           ++     +AR+  +R+  AG  + Y    +    S IAV  +G+ADG          S  
Sbjct: 242 LKNPYRFKARVTAVREMPAGSYLGYYRTYRTRAASKIAVVPVGFADGLGLEALSRPGSWF 301

Query: 287 DSEHSPSVFLGG---------KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           D     +  +G          K  I     P+ GK+ M   + ++     +E G  +++
Sbjct: 302 DLFKIIAKLVGSYLNLSRFTVKVKIGKDEYPVRGKVFMQFCLVELPPDFPVEPGTVVEV 360


>gi|320532158|ref|ZP_08033029.1| alanine racemase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320135625|gb|EFW27702.1| alanine racemase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 386

 Score =  189 bits (479), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 144/370 (38%), Gaps = 57/370 (15%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           R  IDL A+ +N   +  ++G     AVVK +AYG G   IA    +AG     V  + E
Sbjct: 28  RAVIDLEAVAHNGRRLAQVAG-VPWMAVVKADAYGHGLGPIALTALSAGASWLGVAQLAE 86

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI-----------------------S 104
            + LR    +A +    G    Q   +    L  +                        S
Sbjct: 87  ALTLRSLLDEAGVSRPAGEPSAQAPRVLTWLLPVMEPARAAAEDSPLRAALAADLDLSVS 146

Query: 105 SVPQLTFYSKLMSCGVSHPY-ALQVDTGFNRLGLSLQEALDFT---HNSFNKKLGQLSLI 160
           ++PQL   S             L+VDTG +R G + +E          + ++    +  +
Sbjct: 147 TLPQLEALSAAARAQGRAARLHLKVDTGMSRGGAAPEELPALAVALRRAVDEGTVDVVGL 206

Query: 161 ISHLACADDPSSHVNSVQLERFRT-----LISHYKGIEASLASSSGILLGPNYHFQLTRP 215
            SHL+ AD+P+S      LER+R        +        LA++ G+L  P     L R 
Sbjct: 207 WSHLSRADEPASGSTEEHLERYRQAEHVVRAAGLNPPIRHLAATGGLLWHPQARMDLVRA 266

Query: 216 GISLYGGTDKI----NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVA 271
           GI LYG +            ++  +  E+ ++ +++  AG+ VSYGG      D  + + 
Sbjct: 267 GIGLYGLSPDPSVATGAELGLRPAMRLESPLVQVKRIEAGQAVSYGGTWSAPTDRWVGLV 326

Query: 272 AIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS---- 327
            +GY+DG P   S             G   + G M  I+G++ MD  + D+  ++     
Sbjct: 327 PLGYSDGIPRAAS-----------SAGPVGVGGIMTSIVGRVCMDQVVVDLGPAVDETGA 375

Query: 328 -----IEVGD 332
                  VGD
Sbjct: 376 PLPAPARVGD 385


>gi|146743634|gb|ABQ43048.1| alanine racemase [Borrelia burgdorferi]
 gi|146743636|gb|ABQ43049.1| alanine racemase [Borrelia burgdorferi]
 gi|146743638|gb|ABQ43050.1| alanine racemase [Borrelia burgdorferi]
          Length = 359

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 23/350 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 23  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 82

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 83  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 142

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 143 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 200

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 201 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 260

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 261 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 309

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG
Sbjct: 310 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIG 359


>gi|146743626|gb|ABQ43044.1| alanine racemase [Borrelia burgdorferi]
          Length = 355

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 23/350 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 18  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 77

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 78  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 137

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 138 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 195

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 196 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 255

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 256 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 304

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG
Sbjct: 305 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIG 354


>gi|146743628|gb|ABQ43045.1| alanine racemase [Borrelia burgdorferi]
 gi|146743630|gb|ABQ43046.1| alanine racemase [Borrelia burgdorferi]
          Length = 358

 Score =  189 bits (479), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 23/350 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 22  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 81

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 82  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 141

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 142 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 199

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 200 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 259

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 260 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 308

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG
Sbjct: 309 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIG 358


>gi|310817895|ref|YP_003950253.1| alanine racemase [Stigmatella aurantiaca DW4/3-1]
 gi|309390967|gb|ADO68426.1| Alanine racemase [Stigmatella aurantiaca DW4/3-1]
          Length = 414

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 152/395 (38%), Gaps = 46/395 (11%)

Query: 8   RLKIDLTALKNNWHSMNAL----SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            L++   +L++N     AL    +      AV+K NAYG G E++ P L +  V   +  
Sbjct: 29  WLELSAASLRHNVEVFRALEATGAPARALGAVLKGNAYGHGLEQVLP-LVHPLVDILYFI 87

Query: 64  SVEEGVKLR-----LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           + ++ + +R           ++ V+  I P +   +    +  V++         +L + 
Sbjct: 88  TPQDALAVRAFERERKLAPRQVLVIGAISPEEAVALAREGVDAVVADSAWAEAGPRLRAA 147

Query: 119 GVSHP--YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPSSHV 174
            + HP    + +DTG  R G +L++    T      +       +        D      
Sbjct: 148 RLQHPLRVHVHIDTGLGREGFTLEQLPRDTGFLTEYRDVFEVTGVLSHFANTEDVTEQAY 207

Query: 175 NSVQLERFRTLISH-------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
              QLE F    +           ++  +A+S+  L  P   ++  R GISLYG      
Sbjct: 208 ALAQLEAFEAGTARLVEQLSLKGPLQRHIAASAASLSLPRARYEALRVGISLYGFWPSPE 267

Query: 228 KSHPMQ----------TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
                +           V++   R  +++    G  V YG   +    + IAV  +GY D
Sbjct: 268 TRLSTRLVLGGLPTLKPVLSWRCRSQVVKWLPEGSYVGYGCTYRCPEPTRIAVLPVGYFD 327

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP   SG                + G   P+LG++ M+  + D+T + + E      + 
Sbjct: 328 GYPRLASG-----------KAHVLVNGRRCPVLGRVMMNHLIVDVTRATADERPLTATLL 376

Query: 338 GPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
           G D    +  + +A  + T +Y+++ R+G+   + 
Sbjct: 377 GHDGGETLPAETLAGWAQTIHYEVVTRLGSHLRRV 411


>gi|115373926|ref|ZP_01461217.1| alanine racemase [Stigmatella aurantiaca DW4/3-1]
 gi|115369054|gb|EAU67998.1| alanine racemase [Stigmatella aurantiaca DW4/3-1]
          Length = 403

 Score =  188 bits (478), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 80/395 (20%), Positives = 152/395 (38%), Gaps = 46/395 (11%)

Query: 8   RLKIDLTALKNNWHSMNAL----SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
            L++   +L++N     AL    +      AV+K NAYG G E++ P L +  V   +  
Sbjct: 18  WLELSAASLRHNVEVFRALEATGAPARALGAVLKGNAYGHGLEQVLP-LVHPLVDILYFI 76

Query: 64  SVEEGVKLR-----LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           + ++ + +R           ++ V+  I P +   +    +  V++         +L + 
Sbjct: 77  TPQDALAVRAFERERKLAPRQVLVIGAISPEEAVALAREGVDAVVADSAWAEAGPRLRAA 136

Query: 119 GVSHP--YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPSSHV 174
            + HP    + +DTG  R G +L++    T      +       +        D      
Sbjct: 137 RLQHPLRVHVHIDTGLGREGFTLEQLPRDTGFLTEYRDVFEVTGVLSHFANTEDVTEQAY 196

Query: 175 NSVQLERFRTLISH-------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
              QLE F    +           ++  +A+S+  L  P   ++  R GISLYG      
Sbjct: 197 ALAQLEAFEAGTARLVEQLSLKGPLQRHIAASAASLSLPRARYEALRVGISLYGFWPSPE 256

Query: 228 KSHPMQ----------TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
                +           V++   R  +++    G  V YG   +    + IAV  +GY D
Sbjct: 257 TRLSTRLVLGGLPTLKPVLSWRCRSQVVKWLPEGSYVGYGCTYRCPEPTRIAVLPVGYFD 316

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP   SG                + G   P+LG++ M+  + D+T + + E      + 
Sbjct: 317 GYPRLASG-----------KAHVLVNGRRCPVLGRVMMNHLIVDVTRATADERPLTATLL 365

Query: 338 GPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
           G D    +  + +A  + T +Y+++ R+G+   + 
Sbjct: 366 GHDGGETLPAETLAGWAQTIHYEVVTRLGSHLRRV 400


>gi|59711342|ref|YP_204118.1| alanine racemase [Vibrio fischeri ES114]
 gi|59479443|gb|AAW85230.1| alanine racemase [Vibrio fischeri ES114]
          Length = 403

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 145/377 (38%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A +NN  ++  +L  + +  A++K +AYG G E +  ++    V+   +TS 
Sbjct: 40  AWLEIDTQAFQNNIDTLRASLEQDTKVCAIMKADAYGNGIEGLMASVIERNVECIGITSN 99

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PY 124
           EE   +R       +  +    P + +      +  +I S  Q    +KL     +  P 
Sbjct: 100 EEARIVRAKGFVGELMRVRAASPNEIESGLQYKIEELIGSSEQANIIAKLAKQNNTIIPV 159

Query: 125 ALQVD-TGFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSSHVN---S 176
            L ++  G  R GL L +                     +        D+  + +N    
Sbjct: 160 HLALNAGGMGRNGLDLSQPQGKKEALNIAFNGHVNIVGIMTHFPNESVDEIRTKLNLFKQ 219

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                      +   I   +A+S   +  P  H  + RPG  LYG      +    + +V
Sbjct: 220 ESQWLIDEAQLNRDDITLHVANSYTTINLPEAHLDMVRPGGLLYGDMPNNPE---YKRIV 276

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             +  +  +     G  + Y     L RDS++A   +GY+DGY  ++             
Sbjct: 277 QFKTSVASLNYLPKGSTIGYSSTYVLGRDSILANLPLGYSDGYVRSIGN----------- 325

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   I G    ++G  +M+ TM DITD  +++ GD + +FG      I+  ++   S  
Sbjct: 326 NGYVLINGQKANVVGVTSMNTTMVDITDIKNVQPGDEVVLFGKQNEFTIEAKEMEAFSSR 385

Query: 353 TNYDLLVRIGTRYAKFY 369
           +  +L V  G+   K Y
Sbjct: 386 SMPELYVIWGSTNPKIY 402


>gi|160941188|ref|ZP_02088525.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435749|gb|EDP13516.1| hypothetical protein CLOBOL_06081 [Clostridium bolteae ATCC
           BAA-613]
          Length = 392

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/354 (22%), Positives = 136/354 (38%), Gaps = 30/354 (8%)

Query: 8   RLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+I L  +++N+ +   +   + +    VK NAYG G       L   G     + S+ 
Sbjct: 11  WLEISLDNVRDNFFAFKKMVGPDVKVMPAVKANAYGHGIVPCGKELEACGADYLGMGSIS 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           E +KLR    +  + V       +  ++    +LIP I S  +    S   S     P  
Sbjct: 71  EAIKLRENGVKMPLLVFASNTIEEVAELYIQYHLIPTILSEREAKAISDAASS--PVPVF 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLERFR 183
           +++DTG  RLG++ +E  DF           +  + SH+A  +  D S+     Q ERF 
Sbjct: 129 VKIDTGRGRLGVNAEEFPDFYRKITALPNLYVEGVYSHMAAVNWPDVSAEYGLWQYERFS 188

Query: 184 TLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQTV 235
             I        K     LA++ G +  P        PG +++G +    +         +
Sbjct: 189 AAIEVLGEEGKKIPFCQLANTPGGIALPEIRMTGVCPGRAIWGYSPLDRREGHPQLKHPI 248

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
              ++R+I I +   G+        KL     I + A G  DG    L            
Sbjct: 249 TAWKSRLIHINQVCGGKFGENYKAVKLDSPKRIGIMAGGLGDGISPKL------------ 296

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
            GG   + G    +   I+++ T+ D+ D    +VGD I I G     +I ++ 
Sbjct: 297 AGGYVLLHGRKAKVASTISLEHTIIDLADFPDAKVGDEIVILGRQGDEEITMEQ 350


>gi|197334487|ref|YP_002155497.1| alanine racemase [Vibrio fischeri MJ11]
 gi|197315977|gb|ACH65424.1| alanine racemase [Vibrio fischeri MJ11]
          Length = 403

 Score =  188 bits (478), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 80/377 (21%), Positives = 143/377 (37%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A +NN  ++  +L    +  A++K +AYG G E +  ++    V+   +TS 
Sbjct: 40  AWLEIDTQAFQNNIDTLRASLEQGTKVCAIMKADAYGNGIEGLMASVIERNVECIGITSN 99

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH-PY 124
           EE   +R       +  +    P + +      +  +I S  Q    +KL     +  P 
Sbjct: 100 EEARIVRAKGFVGELMRVRAASPNEIESGLQYKIEELIGSSEQANIIAKLAKQNDTIIPV 159

Query: 125 ALQVD-TGFNRLGLSLQEA----LDFTHNSFNKKLGQLSLIISHLACADDPSSHVN---S 176
            L ++  G  R GL L +                     +        D+  + +N    
Sbjct: 160 HLALNAGGMGRNGLDLSQPQGKKEALNIAFNGHVNIVGIMTHFPNESVDEIRTKLNLFKQ 219

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                      +   I   +A+S   +  P  H  + RPG  LYG      +    + +V
Sbjct: 220 ESQWLIDEAQLNRDDITLHVANSYTTINLPEAHLDMVRPGGLLYGDMPNNPE---YKRIV 276

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
             +  +  +     G  + Y     L RDS++A   +GY+DGY  ++             
Sbjct: 277 QFKTSVASLNYLPKGSTIGYSSTYVLGRDSILANLPLGYSDGYVRSIGN----------- 325

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
            G   I G    ++G  +M+ TM D+TD  +++ GD + +FG      I+  ++   S  
Sbjct: 326 NGYVLINGQKANVVGVTSMNTTMVDVTDIKNVQPGDEVVLFGKQNEFTIEAKEMEAFSSR 385

Query: 353 TNYDLLVRIGTRYAKFY 369
           +  +L V  G    K Y
Sbjct: 386 SMPELYVIWGATNPKIY 402


>gi|260364032|ref|ZP_05776760.1| alanine racemase [Vibrio parahaemolyticus K5030]
 gi|260876638|ref|ZP_05888993.1| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|260898078|ref|ZP_05906574.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|260902333|ref|ZP_05910728.1| alanine racemase [Vibrio parahaemolyticus AQ4037]
 gi|308085806|gb|EFO35501.1| alanine racemase [Vibrio parahaemolyticus Peru-466]
 gi|308093954|gb|EFO43649.1| alanine racemase [Vibrio parahaemolyticus AN-5034]
 gi|308110937|gb|EFO48477.1| alanine racemase [Vibrio parahaemolyticus AQ4037]
 gi|308114571|gb|EFO52111.1| alanine racemase [Vibrio parahaemolyticus K5030]
          Length = 404

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 149/377 (39%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A  NN   +   L GN +  A++K +AYG G   + P++    V    +TS 
Sbjct: 41  AWLEIDTQAFSNNIQLLQKDLKGNTQICAIMKADAYGNGIAGLMPSIIANNVACVGITSN 100

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EE   +R +  + +I  +      + +      +  +I +  Q     ++        P 
Sbjct: 101 EEARVVREHGFEGKIMRVRAASRNEIENGVQYEIEELIGTKMQADQIIEIAYNYNTVIPV 160

Query: 125 ALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPS---SHVNS 176
            L ++T   G N L L+  E         +    ++  +++H      D+          
Sbjct: 161 HLALNTSGMGRNGLDLTTYEGQVEGVEIASDPNLKIVGMMTHFPNEGLDEIRRKVDRFKV 220

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     K I   +A+S   L  P  H  + RPG  LYG       + P + +V
Sbjct: 221 ETKWLMDSAGLKRKDITLHVANSYITLNLPEAHLDMVRPGGMLYGDYP---ATLPYERIV 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + RI  +    AG  + YG  K L RDS++A   IGY+DG+  +LS            
Sbjct: 278 SFKTRIASLHFFPAGSTIGYGSTKVLERDSILANLPIGYSDGFARSLSN----------- 326

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++GK +M+ TM D+TD + ++  D + +FG      I  ++    SG 
Sbjct: 327 KADVLINGQRARVMGKASMNTTMVDVTDIIGVQANDEVVVFGRQGFEEITAEETEEKSGR 386

Query: 353 TNYDLLVRIGTRYAKFY 369
              +     G    + Y
Sbjct: 387 ILPEHYTIWGATNPRVY 403


>gi|153837983|ref|ZP_01990650.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
 gi|149748591|gb|EDM59450.1| alanine racemase [Vibrio parahaemolyticus AQ3810]
          Length = 404

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/377 (22%), Positives = 149/377 (39%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A  NN   +   L GN +  A++K +AYG G   + P++    V    +TS 
Sbjct: 41  AWLEIDTQAFSNNIQLLQKDLKGNTQICAIMKADAYGNGIAGLMPSIIANNVACVGITSN 100

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EE   +R +  + +I  +      + +      +  +I +  Q     ++        P 
Sbjct: 101 EEARVVREHGFKGKIMRVRAASRNEIENGVQYEIEELIGTKMQADQIIEIAYNYNTVIPV 160

Query: 125 ALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPS---SHVNS 176
            L ++T   G N L L+  E         +    ++  +++H      D+          
Sbjct: 161 HLALNTSGMGRNGLDLTTYEGQVEGVEIASDPNLKIVGMMTHFPNEGLDEIRRKVDRFKV 220

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     K I   +A+S   L  P  H  + RPG  LYG       + P + +V
Sbjct: 221 ETKWLMDSAGLKRKDITLHVANSYITLNLPEAHLDMVRPGGMLYGDYP---ATLPYERIV 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +    AG  + YG  K L RDS++A   IGY+DG+  +LS            
Sbjct: 278 SFKTRVASLHFFPAGSTIGYGSTKVLERDSILANLPIGYSDGFARSLSN----------- 326

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++GK +M+ TM D+TD + ++  D + +FG      I  ++    SG 
Sbjct: 327 KADVLINGQRARVMGKASMNTTMVDVTDIIGVQANDEVVVFGRQGFEEITAEETEEKSGR 386

Query: 353 TNYDLLVRIGTRYAKFY 369
              +     G    + Y
Sbjct: 387 ILPEHYTIWGATNPRVY 403


>gi|328472253|gb|EGF43123.1| alanine racemase [Vibrio parahaemolyticus 10329]
          Length = 404

 Score =  188 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 86/377 (22%), Positives = 149/377 (39%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A  NN   +   L GN +  A++K +AYG G   + P++    V    +TS 
Sbjct: 41  AWLEIDTQAFSNNIQLLQKDLKGNTQICAIMKADAYGNGIAGLMPSIIANNVACVGITSN 100

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EE   +R +  + +I  +      + +      +  +I +  Q     ++        P 
Sbjct: 101 EEARVVREHGFEGKIMRVRAASRNEIENGVQYEIEELIGTKMQADQIIEIAYNYNTVIPV 160

Query: 125 ALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPS---SHVNS 176
            L ++T   G N L L+  E         +    ++  +++H      D+          
Sbjct: 161 HLALNTSGMGRNGLDLTTYEGQVEGVEIASDPNLKIVGMMTHFPNEGLDEIRRKVDRFKV 220

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     K I   +A+S   L  P  H  + RPG  LYG       + P + +V
Sbjct: 221 ETKWLMDSAGLKRKDITLHVANSYITLNLPEAHLDMVRPGGMLYGDYP---ATLPYERIV 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + R+  +    AG  + YG  K L RDS++A   IGY+DG+  +LS            
Sbjct: 278 SFKTRVASLHFFPAGSTIGYGSTKVLERDSILANLPIGYSDGFARSLSN----------- 326

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++GK +M+ TM D+TD + ++  D + +FG      I  ++    SG 
Sbjct: 327 KADVLINGQRARVMGKASMNTTMVDVTDIIGVQANDEVVVFGRQGFEEITAEETEEKSGR 386

Query: 353 TNYDLLVRIGTRYAKFY 369
              +     G    + Y
Sbjct: 387 ILPEHYTIWGATNPRVY 403


>gi|260461729|ref|ZP_05809975.1| alanine racemase [Mesorhizobium opportunistum WSM2075]
 gi|319785281|ref|YP_004144757.1| alanine racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|259032370|gb|EEW33635.1| alanine racemase [Mesorhizobium opportunistum WSM2075]
 gi|317171169|gb|ADV14707.1| alanine racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 381

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/381 (18%), Positives = 137/381 (35%), Gaps = 30/381 (7%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           ++     +IDL A+++N+  +        +  A +K NAYG G   +A  L   G   F 
Sbjct: 16  ASREAWYEIDLGAIRHNYRQLRRHLPRTVKIFACLKRNAYGCGAGPVARTLATEGADGFA 75

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V ++ + + +R       + +  G  P   K I    L   +SS+ +        +    
Sbjct: 76  VATLPDAMAIREMGIDLPVLLYPGPLPTSAKTIEALGLTVTVSSLDE---LESWRAAMSV 132

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-----ADDPSSHVNS 176
               ++ D GF R G + QE       +      ++  + +HL+        D S   + 
Sbjct: 133 TRIFVKADLGFFRAGATPQEIGRLLAAAHVCSDVEVQGLYAHLSELPTSVTSDASEQFSR 192

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG--GTDKINKSHPMQT 234
           +Q        S  +     ++S++G+L  P        PG    G   TD+  ++  ++ 
Sbjct: 193 LQRILQDAEASGTRPPIIMMSSTAGVLRHPAMDLDAVDPGALFIGLPETDRPMRAVTLRP 252

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            + A +  ++  K +   L              I V  +G+ DG P             V
Sbjct: 253 ALKAISTCLVSVKRIDASLGPIPDIPGFRSGMTIGVLGMGWGDGLPRH-----------V 301

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
               +  ++G    +L    ++    D+TD      GD + + G      I  ++VA   
Sbjct: 302 PAQAEALVRGQRARLLPPAHLEHLRIDLTDVPDARFGDQVLLLGQQAHQTISHEEVAAQW 361

Query: 351 GT--TNYDLLVRIGTRYAKFY 369
           GT      L  ++     + Y
Sbjct: 362 GTDLIG--LYAQLRDHIPRVY 380


>gi|262368964|ref|ZP_06062293.1| alanine racemase [Acinetobacter johnsonii SH046]
 gi|262316642|gb|EEY97680.1| alanine racemase [Acinetobacter johnsonii SH046]
          Length = 408

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 82/344 (23%), Positives = 140/344 (40%), Gaps = 23/344 (6%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++I++   + N  ++   L   ++  AV+K +AYG G E + P++    V    +TS 
Sbjct: 43  AWVEINVQTFEQNIQTLQQQLQDKSQFCAVMKADAYGHGIELLMPSIIKLNVPCVGITSN 102

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPY 124
            E   +R    Q R+  L      + +     N+  ++ +  Q    S+     G+   Y
Sbjct: 103 AEAALVRKSGYQGRLLRLRAATDQEIQNAASLNMEELLGNYEQAQRLSEWAKQQGLILEY 162

Query: 125 ALQVD-TGFNRLGLSLQEAL--DFTHNSFNKKLGQLSLIISHLACADDPSSH-----VNS 176
            L ++  G +R GL L  AL              +L  I++H A  D+          N 
Sbjct: 163 HLGLNAGGMDRNGLELNSALGKQQALRMTKLPNLKLVGIMTHYAVEDEKYVRERLAVFNQ 222

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                 +      + +    A+S   L  P  H  + R G  +YG  D +      + ++
Sbjct: 223 QTDWIIKKAKLKREALTLHTANSFATLTVPESHLDMVRAGGVIYG--DSLPDRVEYKKLM 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T + ++  +   L G  V Y     L RDSL+A   +GY+DGY    S            
Sbjct: 281 TFKTQVATVNAYLKGTTVGYDQTYTLKRDSLLANLPLGYSDGYRRAFSN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
                I+G+ VP++G+ +M+ TM DITD   I   D + +FG  
Sbjct: 330 KAYVLIRGHKVPVVGRTSMNTTMVDITDFPDIRANDEVVLFGEQ 373


>gi|28899622|ref|NP_799227.1| alanine racemase [Vibrio parahaemolyticus RIMD 2210633]
 gi|28807874|dbj|BAC61111.1| putative alanine racemase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 392

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 149/377 (39%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A  NN   +   L GN +  A++K +AYG G   + P++    V    +TS 
Sbjct: 29  AWLEIDTQAFSNNIQLLQKDLKGNTQICAIMKADAYGNGIAGLMPSIIANNVACVGITSN 88

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPY 124
           EE   +R +  + +I  +      + +      +  +I +  Q     ++        P 
Sbjct: 89  EEARVVREHGFEGKIMRVRAASRNEIENGVQYEIEELIGTKMQADQIIEIAYNYNTVIPV 148

Query: 125 ALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA--DDPS---SHVNS 176
            L ++T   G N L L+  E         +    ++  +++H      D+          
Sbjct: 149 HLALNTSGMGRNGLDLTTYEGQVEGVEIASDPNLKIVGMMTHFPNEGLDEIRRKVDRFKV 208

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     K I   +A+S   L  P  H  + RPG  LYG       + P + +V
Sbjct: 209 ETKWLMDSAGLKRKDITLHVANSYITLNLPEAHLDMVRPGGMLYGDYP---ATLPYERIV 265

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + + RI  +    AG  + YG  K L RDS++A   IGY+DG+  +LS            
Sbjct: 266 SFKTRIASLHFFPAGSTIGYGSTKVLERDSILANLPIGYSDGFARSLSN----------- 314

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
                I G    ++GK +M+ TM D+TD + ++  D + +FG      I  ++    SG 
Sbjct: 315 KADVLINGQRARVMGKASMNTTMVDVTDIIGVQANDEVVVFGRQGFEEITAEETEEKSGR 374

Query: 353 TNYDLLVRIGTRYAKFY 369
              +     G    + Y
Sbjct: 375 ILPEHYTIWGATNPRVY 391


>gi|203284081|ref|YP_002221821.1| alanine racemase [Borrelia duttonii Ly]
 gi|201083524|gb|ACH93115.1| alanine racemase [Borrelia duttonii Ly]
          Length = 370

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 89/380 (23%), Positives = 153/380 (40%), Gaps = 26/380 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  ++   + I+   L++N  ++ +        A +K +AYG G  +         +  F
Sbjct: 4   MTKHK--EIIINFKNLEHNLITIKSHVHKKELVATLKADAYGHGLIQTFKFFKEKNINYF 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSC 118
            + S+ + +KLR    ++ I +                 I    +  Q       +    
Sbjct: 62  GLFSIYDALKLRKIDKKSNILLYINNINKNAIKNLVNFEITPFVADSQYLSLIEEECKRQ 121

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L+VD G NR G+  + AL+      + KL +   I +HL   ++  + +   Q
Sbjct: 122 NKKIKVHLKVDVGMNRYGIKTENALNLATKIQDSKLVEFEGICTHLPTTEN--TKITQTQ 179

Query: 179 LERFRTLISH--YKGIEASLASSSGILLGPNY----HFQLTRPGISLYGGT---DKINKS 229
            ++F  LI+    K I       S      NY     F + RPG+ LYG     +  N +
Sbjct: 180 SKKFDYLINELKNKNINPKFIHISNSGHITNYKISEKFNMIRPGLILYGYHPNPNNQNNN 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+   +++I I+    G+ +SY G  K   D  I +  +GY DG P   S     
Sbjct: 240 LKLKPVLNLYSKVIFIKNIKKGDQISYSGLFKAKEDMQIGLIPVGYFDGIPQNTS----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALA 349
                       IK     I GKI M++++ +I   L I +GD ++I    + LD ++  
Sbjct: 295 ------KNFYCIIKNKKCFIRGKICMNISIIEIPQDLKINIGDKVEIVSERLSLDILSKE 348

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           SG + Y+LL  IG    K Y
Sbjct: 349 SGRSTYELLCSIGKNEKKKY 368


>gi|291562623|emb|CBL41439.1| alanine racemase [butyrate-producing bacterium SS3/4]
          Length = 403

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 85/390 (21%), Positives = 145/390 (37%), Gaps = 43/390 (11%)

Query: 8   RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALY-NAGVQDFFVTSVE 66
           RL+I+L+ +  N   + A +G      VVK NAYG G   +A  L    G++   V  + 
Sbjct: 9   RLEINLSRIGRNIDKIRAYTGGLGLIPVVKSNAYGYGTAAVANFLVRRCGIRFLAVARLF 68

Query: 67  EGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG--VSHP 123
           E  +++    P   I +L  +   Q   I    +   +  V      S+        S  
Sbjct: 69  EACQIQDSGCPDCGILILGPVPAFQIPTIVKRKIEIPLFRVEDAKRLSEEAKKQGLASVK 128

Query: 124 YALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPS----SHVNSVQ 178
             ++++TG NR+G    +E  D           ++  + +H A AD  +    +     Q
Sbjct: 129 AHIKIETGMNRIGARPGKELSDLLSCIKGLGNIEIDGVFTHFATADQANEGKGNDFTREQ 188

Query: 179 LERFRTLISHYK-----GIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINKSHP 231
             RF   +S  +            ++         +      R G    G +   N  +P
Sbjct: 189 FSRFLEGLSQIREAGITPRYVHCCNTGATAWLKEAYSVCTHVRTGSLYLGYSSIQNDWNP 248

Query: 232 M--QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
           +  +   + +  I+ IR+ + GE V YG        + +AV  IGY DGY  +       
Sbjct: 249 IGVEESGSWKTMIVNIREIVPGESVGYGRTFMPDHPAKVAVIGIGYGDGYTRSF------ 302

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLD 344
                  G    I G     +G   MDM+  D+TD    ++GD + +FG D     I   
Sbjct: 303 ----AVSGAPALINGVRCRFVGT-CMDMSFLDVTDV-DCKIGDEVTLFGEDGKGNRISGL 356

Query: 345 DVALASGTTNYD----LLVRIGTRYAKFYT 370
           ++    G    +    +   I  R A+ Y+
Sbjct: 357 EIGHLMG----ETRLAMFSHITERAARTYS 382


>gi|203287620|ref|YP_002222635.1| alanine racemase [Borrelia recurrentis A1]
 gi|201084840|gb|ACH94414.1| alanine racemase [Borrelia recurrentis A1]
          Length = 370

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 88/380 (23%), Positives = 154/380 (40%), Gaps = 26/380 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  ++   + I+   L++N  ++ +        A +K +AYG G  +         +  F
Sbjct: 4   MTKHK--EIIINFKNLEHNLITIKSHVHKKELVATLKADAYGHGLIQTFKFFKEKNINYF 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--SKLMSC 118
            + S+ + +KLR    ++ I +                 I    +  Q       +    
Sbjct: 62  GLFSIYDALKLRKIDKKSNILLYINNINKNAIKNLVNFEITPFVADSQYLSLIEEECKRQ 121

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                  L+VD G NR G+  + AL+      + KL +   I +HL   ++  + +   Q
Sbjct: 122 NKKIKVHLKVDVGMNRYGIKTENALNLATKIQDSKLVEFEGICTHLPTTEN--TKITQTQ 179

Query: 179 LERFRTLISH--YKGIEASLASSSGILLGPNY----HFQLTRPGISLYGGT---DKINKS 229
            ++F  LI+    K I       S      NY    +F + RPG+ LYG     +  N +
Sbjct: 180 SKKFDYLINELKNKNINPKFIHISNSGHITNYKISENFNMIRPGLILYGYHPNPNNQNNN 239

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V+   +++I ++    G+ +SY G  K   D  I +  +GY DG P   S     
Sbjct: 240 LKLKPVLNLYSKVIFVKNIKKGDQISYSGLFKAKEDMQIGLIPVGYFDGIPQNTS----- 294

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALA 349
                       IK     I GKI M++++ +I   L I +GD ++I    + LD ++  
Sbjct: 295 ------KNFYCIIKDKKCFIRGKICMNISIIEIPQDLKINIGDKVEIVSERLSLDILSKE 348

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           SG + Y+LL  IG    K Y
Sbjct: 349 SGRSTYELLCSIGKNEKKKY 368


>gi|183599355|ref|ZP_02960848.1| hypothetical protein PROSTU_02822 [Providencia stuartii ATCC 25827]
 gi|188021591|gb|EDU59631.1| hypothetical protein PROSTU_02822 [Providencia stuartii ATCC 25827]
          Length = 407

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 78/358 (21%), Positives = 144/358 (40%), Gaps = 28/358 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   + AL G+ +   AV+K +AYG     + P +    VQ   +T+ +
Sbjct: 44  WIEISRSALDFNIKKVQALLGDKSSLCAVLKGDAYGHDLTLVTPLMIENNVQCIGLTNNQ 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-MSCGVSHPYA 125
           E  ++R    + R+  +      +       ++  +I ++      + +        P  
Sbjct: 104 EFKQVRELGFKGRLMRVRNATEQEMAQATAYDVEELIGNLDMAQRLNDIGKKQNKVIPIH 163

Query: 126 LQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           L +++     N L +S  + L+           ++  I+SH    D+     +  + ++ 
Sbjct: 164 LALNSAGMSRNGLEVSHAQGLNDAKMIAQLPQLKVVGIMSHYPEEDEAQIRKDLAKFKKQ 223

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +    G++       +A++   +  P     + R G   YG T         + V+T
Sbjct: 224 SQQVLDVTGLKREDVILHVANTYATITVPESWLDMVRVGGIFYGDTVATKD---YKRVMT 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ I  +     G  V Y     L RDS++A   +GYADGY    S             
Sbjct: 281 LKSNIASVNHYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN-----------A 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
           G   I G  VP+LGK +M+  M D+TD   ++ GD +  FG     +I  ++V   SG
Sbjct: 330 GHALINGQTVPVLGKTSMNTVMVDVTDLKQVQPGDEVVFFGKQGNGEITAEEVEDISG 387


>gi|197285632|ref|YP_002151504.1| alanine racemase [Proteus mirabilis HI4320]
 gi|194683119|emb|CAR43692.1| putative alanine racemase [Proteus mirabilis HI4320]
          Length = 407

 Score =  186 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 140/359 (38%), Gaps = 30/359 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   + +L G  +   AV+K +AYG     +AP +    VQ   VT+ +
Sbjct: 44  WIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQ 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E  ++R    + R+  +      +     + N+  +I  +       +         P  
Sbjct: 104 ELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIH 163

Query: 126 LQVDTG-FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L +++G  +R GL +             +L  L ++       ++  + V    L RF+ 
Sbjct: 164 LALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDVNKV-REDLARFKQ 222

Query: 185 LIS--------HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                          +   +A++   +  P     + R G   YG       S   + V+
Sbjct: 223 QSQKVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYG---DTIASTDYKRVM 279

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  I     G  V Y     L RDS++A   +GYADGY    S            
Sbjct: 280 TFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN----------- 328

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I G  VP+LGK +M+  M DIT   +I+ GD +  FG     +I  +++   SG
Sbjct: 329 AGHALIAGQRVPVLGKTSMNTVMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISG 387


>gi|224531812|ref|ZP_03672444.1| alanine racemase [Borrelia valaisiana VS116]
 gi|224511277|gb|EEF81683.1| alanine racemase [Borrelia valaisiana VS116]
          Length = 366

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 80/351 (22%), Positives = 146/351 (41%), Gaps = 23/351 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+  KL+      +I +
Sbjct: 21  IKNKIGEKEIVATLKADAYGHGLINIFKFLKSKKINYFGLSNIEDAKKLKKIDKSIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECALQKKKIKVHLKIDIGMNRYGIKIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  + SHL   ++        Q+E+F   +      +       +
Sbjct: 141 ALEIATYIQNSKFLELEGVCSHLPTTENF--KTTQKQIEQFLFFLETLKQKNINPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  IL    N  F + RPG+ LYG +            + V+   +++I I+    GE
Sbjct: 199 SNSGHILNYKLNPQFNMVRPGLILYGYSPFPKNKKTILNFKPVLNLFSKVIFIQNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +  +D  + +  IGY DG P  ++                 I      I GK
Sbjct: 259 KISYSGIFQAKKDMKVGIIPIGYFDGIPQNINN-----------NFYFLINNKKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           + M++T+ +I   L ++ G  ++I    + +D ++  S  +NY+LL  IG 
Sbjct: 308 VCMNITIVEIPKDLKVKTGSKVEIVSEKLSIDKMSKFSKRSNYELLCNIGK 358


>gi|167465430|ref|ZP_02330519.1| alanine racemase [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 314

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 24/263 (9%)

Query: 120 VSHPYALQVDTGFNRLG-LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
                 ++VD+G +R+G    +EA+ +           L  + +H ACAD+       +Q
Sbjct: 45  KRLRVHVKVDSGMHRIGLYKEEEAVSYLKQIARMPHICLEGLFTHYACADEADKAYTRLQ 104

Query: 179 LERFRTLISHYKGIEASLA-----SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH--- 230
            E+F  ++   K +   +      +S+  +  P   + + R GI++YG        H   
Sbjct: 105 YEKFSRVVHEVKRLGIDIPYIHAGNSAAAIDTPELVYNMARLGIAMYGLYPSEKVDHTII 164

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
            ++ V++ + R+I  +    G  +SYG       +  I    IGYADG+   LS      
Sbjct: 165 KLEPVMSLKTRMIHDKWLSEGSGISYGTIYHTKGEERIGTLPIGYADGFSRMLS------ 218

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDV 346
                      I+G  VPI+G+I MD  M +IT     E GD + + G      I  +++
Sbjct: 219 -----TKANALIRGKRVPIVGRICMDQCMLNITGVPEAEAGDEVVLIGRQGDEVIPAEEI 273

Query: 347 ALASGTTNYDLLVRIGTRYAKFY 369
           A   GT NY++   +  R  + Y
Sbjct: 274 AGHLGTINYEVTCMMAHRIPRVY 296


>gi|237731612|ref|ZP_04562093.1| alanine racemase [Citrobacter sp. 30_2]
 gi|226907151|gb|EEH93069.1| alanine racemase [Citrobacter sp. 30_2]
          Length = 408

 Score =  185 bits (470), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 143/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I  +AL+ N H +  L G+  R  A++K +AYG     + P +   GVQ   + S 
Sbjct: 44  TTLEISRSALEYNIHKVQQLLGDKTRMCAILKGDAYGHDLSLVTPVMMQNGVQCIGIASN 103

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           EE   +R     +++  +      + +   D +   +I ++      S +    G +   
Sbjct: 104 EEISTVRQSGYTSQLMRVRNATEKEMRQAADFDTEELIGNLDMAKRLSAIAQEKGKTIRI 163

Query: 125 ALQVDTG-FNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADD-----PSSHVNS 176
            L +++G  +R GL +  A               ++  I+SH    D        +  N+
Sbjct: 164 HLALNSGGMSRNGLEVSTAAGLEEARAISALPGLKIVGIMSHFPEEDAAVVKRDLARFNT 223

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
              +  +      + +   +A++   L  P     + R G   YG       S   + V+
Sbjct: 224 QSAQVLKITGLKREDVTLHVANTFATLTVPESWLDMVRVGGIFYG---DTIGSTEYKRVM 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDS++A    GYADGY    S            
Sbjct: 281 TFKSAIASVNHYPKGNTVGYDRTYTLKRDSVLANIPTGYADGYRRVFSN----------- 329

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  VP+LGK +M+  + D+TD   +  GD + +FG      +  ++V   SG
Sbjct: 330 AGHVLIRGQRVPVLGKTSMNTVIVDVTDLPQVASGDEVVLFGKQGNAQVSAEEVEEISG 388


>gi|218662157|ref|ZP_03518087.1| putative alanine racemase [Rhizobium etli IE4771]
          Length = 325

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 160/316 (50%), Positives = 204/316 (64%), Gaps = 11/316 (3%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR AAVVK +AYGLG E    ALY AG +DFFV +V+
Sbjct: 21  LRLTVDLTALTENWRDMARRSGAARAAAVVKADAYGLGIEDAGEALYTAGARDFFVATVD 80

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P ARIFVL GI PG E+  FD +L+PVISS  QL F+  +++    +  AL
Sbjct: 81  EGVTLRLYAPDARIFVLSGIWPGTERRFFDNDLVPVISSDEQLAFWMAVLADYGDYSCAL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            VDTGF   G                      L++SHLAC DDP++ +N  QLE FR + 
Sbjct: 141 HVDTGFTGWG-----------CISTMPSFAPVLVMSHLACGDDPTNAMNRQQLESFRRVT 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG      ++PM+ V TAEARII +R
Sbjct: 190 AAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVCGMANPMRPVATAEARIIQVR 249

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE VSYG   +L RDS +A+ + GYADGY  + S        +V  GG+GFI G+ 
Sbjct: 250 TVGAGETVSYGRALQLPRDSRLAIVSAGYADGYMRSQSSGGVPLRQAVPQGGQGFIAGHK 309

Query: 307 VPILGKITMDMTMFDI 322
           VP+ G+ITMD+T+FD+
Sbjct: 310 VPVAGRITMDLTIFDV 325


>gi|146743640|gb|ABQ43051.1| alanine racemase [Borrelia burgdorferi ZS7]
          Length = 356

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 23/348 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 22  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 81

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 82  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 141

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 142 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 199

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +    P    + V++  +++I I+    GE
Sbjct: 200 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKPALNFKPVLSLFSKVIFIKNVKKGE 259

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 260 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 308

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVR 360
           + M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  
Sbjct: 309 VCMNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCN 356


>gi|227356137|ref|ZP_03840526.1| alanine racemase [Proteus mirabilis ATCC 29906]
 gi|227163601|gb|EEI48517.1| alanine racemase [Proteus mirabilis ATCC 29906]
          Length = 407

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/359 (22%), Positives = 141/359 (39%), Gaps = 30/359 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   + +L G  +   AV+K +AYG     +AP +    V+   VT+ +
Sbjct: 44  WIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVKCIGVTNNQ 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E  ++R    + R+  +      +     + N+  +I  +       +         P  
Sbjct: 104 ELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIH 163

Query: 126 LQVDTG-FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L +++G  +R GL +             +L  L ++       ++ ++ V    L RF+ 
Sbjct: 164 LALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKV-REDLARFKQ 222

Query: 185 LISH--------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                          +   +A++   +  P     + R G   YG       S   + V+
Sbjct: 223 QSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYG---DTIASTDYKRVM 279

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  I     G  V Y     L RDS++A   +GYADGY    S            
Sbjct: 280 TFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN----------- 328

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I G  VP+LGK +M+  + DIT   +I+ GD +  FG     +I  +++   SG
Sbjct: 329 AGHALIAGQRVPVLGKTSMNTVIVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISG 387


>gi|291165697|gb|EFE27745.1| alanine racemase [Filifactor alocis ATCC 35896]
          Length = 383

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/378 (23%), Positives = 143/378 (37%), Gaps = 29/378 (7%)

Query: 9   LKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
             ID    + N   +   +  +     V+KDNAYGLG  ++A      GV  + V ++ E
Sbjct: 17  AVIDREIYRKNIRLIQHQIGKDTGLILVLKDNAYGLGATELARVGMQEGVSCYAVANLYE 76

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYAL 126
            ++LR      RI VL  I+     I    ++  V+ +      Y +   S G      +
Sbjct: 77  ALELRKLDSDIRIIVLGYINEDARTIALQYDIDVVVWTKELALSYQQLGFSSGKQARIHI 136

Query: 127 QVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +VDTG +RLG    +E+L         +   +    SH AC +      +  QL  F T 
Sbjct: 137 KVDTGLSRLGFLPNEESLAVLEEISKMEHLTIVSTFSHFACTETDDDDFSRGQLSTFLTF 196

Query: 186 ISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN-----KSHPMQTV 235
           +   K          +A S+GI+  P  H    R G    G     +     + +P + +
Sbjct: 197 VDSMKKRGIQPGFIHMADSAGIVKFPESHLDFVRCGALAMGSMTGTDVVKSSEQYPTEEI 256

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  +++  ++    G  + Y G      D  +    +GY DG    LS           
Sbjct: 257 ISLYSQVARVQDFPKGTSIGYDGTYFADHDIRVVTVPMGYGDGLSGELSNSM-------- 308

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
              +  I G     +G   MDM MFD T     + GD + I G D    + L D      
Sbjct: 309 ---QVIINGKKAKSVGAFCMDMAMFDATGI-DCKEGDTVTILGQDGNEKVSLHDWTKLCT 364

Query: 352 TTNYDLLVRIGTRYAKFY 369
           +++  L   +  +  K Y
Sbjct: 365 SSSTFLQSMLRNKIPKEY 382


>gi|212710795|ref|ZP_03318923.1| hypothetical protein PROVALCAL_01863 [Providencia alcalifaciens DSM
           30120]
 gi|212686492|gb|EEB46020.1| hypothetical protein PROVALCAL_01863 [Providencia alcalifaciens DSM
           30120]
          Length = 413

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/358 (22%), Positives = 141/358 (39%), Gaps = 28/358 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   +  L G+ A   AV+K ++YG     + P +    VQ   +TS  
Sbjct: 50  WIEISHSALDYNIKKVQTLLGDKAGLCAVLKGDSYGHDLTLVTPVMIENNVQCIGLTSNT 109

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E  ++R    + R+  +      +     + ++  +I ++       +         P  
Sbjct: 110 EFKQVRDLGFKGRLMRVRNATEKEMAQATEFHVEELIGNLDMAQRLNAIGAKQNTIIPIH 169

Query: 126 LQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           L +++     N L +S  E L            ++  I+SH    D+     +  + ++ 
Sbjct: 170 LALNSAGMSRNGLEVSNAEGLQQAKLISQLPNLKIVGIMSHYPEEDEAQIRQDLAKFKKQ 229

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +    G++       +A++   L  P     + R G   YG       +   + V+T
Sbjct: 230 SQQVLKMTGLKREDVTLHVANTYATLTVPESWLDMVRVGGIFYG---DTIATKDYKRVMT 286

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ I  +     G  V Y     L RDS++A   +GYADGY    S             
Sbjct: 287 FKSNIAAVNHYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN-----------A 335

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
           G   I G  VP+ GK +M+  M DITD  +++ GD +  FG     +I  ++V   SG
Sbjct: 336 GHVLINGQRVPVFGKTSMNTVMVDITDLKNVQPGDEVVFFGKQGNGEITAEEVEEISG 393


>gi|54310452|ref|YP_131472.1| alanine racemase [Photobacterium profundum SS9]
 gi|46914893|emb|CAG21670.1| putative alanine racemase [Photobacterium profundum SS9]
          Length = 404

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+ID  A   N   +   L  + +  A++K +AYG G   + P++    V    +TS 
Sbjct: 41  AWLEIDTQAFSGNIQLLQNQLKADTKICAIMKADAYGNGIAGLMPSIIANQVPCVGITSN 100

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPY 124
           EE   +R +    +I  +      + +      +  +I +  Q         + G + P 
Sbjct: 101 EEARVVRKHGFIGKIMRVRAASKNEIEGGLQYQMEELIGTKAQADQIIEIARANGTTIPV 160

Query: 125 ALQVDT-GFNRLGL-------SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            L ++T G  R GL        ++        +              L            
Sbjct: 161 HLALNTSGMGRNGLDLTTYEGQVEGVEIAGDPNLEIVGMMTHFPNEGLDEIKRKVKRFKV 220

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                  +     K +   +A+S   L  P  H  + RPG  LYG         P Q +V
Sbjct: 221 ETKWLMDSTDLKRKDVTLHVANSYITLNLPEAHLDMVRPGGMLYGDYPATA---PYQRIV 277

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           + +  +  +    AG  + YG    L RDS++A   IGY+DG+  +L             
Sbjct: 278 SFKTHVASLHHFPAGSTIGYGSTAVLERDSVLANLPIGYSDGFARSLGN----------- 326

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGT 352
             +  I G    ++G ++M+ TM D+TD + ++  + + IFG      I  ++    S  
Sbjct: 327 KAEVLINGQRARVMGMVSMNTTMVDVTDIVDVQTNEEVVIFGRQGFEEITGEETEEKSNR 386

Query: 353 TNYDLLVRIGTRYAKFY 369
              +     G    + Y
Sbjct: 387 ILPEHYTVWGATNPRIY 403


>gi|261345933|ref|ZP_05973577.1| alanine racemase [Providencia rustigianii DSM 4541]
 gi|282566018|gb|EFB71553.1| alanine racemase [Providencia rustigianii DSM 4541]
          Length = 407

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 28/358 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   + AL G+     AV+K +AYG     + P +    VQ   +TS  
Sbjct: 44  WIEISHSALDYNIKKVQALLGDKTGMCAVLKGDAYGHDLTLVTPVMIENNVQCIGLTSNS 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYA 125
           E  ++R      R+  +      +     + N+  +I ++      + +    G   P  
Sbjct: 104 ELKQVRDLGFNGRLMRVRNATEKEMAQATEFNVEELIGNLEMAQRLNAIAVKQGKIIPIH 163

Query: 126 LQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
           L +++     N L +     L            ++  I+SH    D      + V+ ++ 
Sbjct: 164 LALNSAGMSRNGLEVGTSTGLQQAKLISELPNLKIVGIMSHYPEEDAAQIRKDLVKFKKQ 223

Query: 183 RTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
              +    G++       +A++   L  P     + R G   YG T         + V+T
Sbjct: 224 SQQVLDITGLKREDVTLHVANTYATLTVPESWLDMVRVGGIFYGDTVATKD---YKRVMT 280

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++ I  +     G  V Y     L RDS++A   +GYADGY    S             
Sbjct: 281 FKSNIAAVNHYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN-----------A 329

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
           G   I G  VP+LGK +M+  + D+TD  +++ GD +  FG     +I  ++V   SG
Sbjct: 330 GHVLINGQRVPVLGKTSMNTVVIDVTDIKNVQPGDEVVFFGKQGVGEITAEEVEDISG 387


>gi|108763995|ref|YP_635273.1| alanine racemase [Myxococcus xanthus DK 1622]
 gi|108467875|gb|ABF93060.1| alanine racemase [Myxococcus xanthus DK 1622]
          Length = 409

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 87/394 (22%), Positives = 167/394 (42%), Gaps = 47/394 (11%)

Query: 8   RLKIDLTALKNNWHSMNALSGN--ARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L++  +AL++N     AL G    R   VV K NAYG G  ++ P   +  V   +V +
Sbjct: 25  WLELSASALRHNVAVFRALEGQGAPRALGVVLKGNAYGHGLAQVLPV-VHGEVDLLYVIA 83

Query: 65  VEEGVKLRLY------TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            ++ +K+R Y       P+  + VL  + P +  ++    +  V++        + L + 
Sbjct: 84  PQDALKVREYERAQGLGPRQ-VLVLGAVAPDEAVVLAREGVDAVVADRGWADAAAVLRAA 142

Query: 119 G--VSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSH-V 174
                    + +DTG  R G +L+     +   S ++ + ++  ++SH A  +D +    
Sbjct: 143 KLERPLRVHVHLDTGLGREGFTLEGLPTESRFLSESRDVLEVVGVLSHFANTEDVTEQGY 202

Query: 175 NSVQLERFR-------TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
              Q++ F          ++  + ++  +A+S+  L+ P   ++  R GISLYG      
Sbjct: 203 ALAQVDAFEKGLAFLSEQLAPARPLQRHIAASAATLVLPRARYEALRVGISLYGLWPSPE 262

Query: 228 KSHPMQ----------TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
                +           V++   R  +++   AG  V YG   +    + IAV  +GY D
Sbjct: 263 TRLSARLVLGEVPVLKPVLSWRCRSQVVKWLSAGSYVGYGCTYRCPEPTRIAVLPVGYYD 322

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP  +SG                + G   P+LG++ M+  + D+T + S E      + 
Sbjct: 323 GYPRLVSG-----------KAHVLVNGRRCPVLGRVMMNHLIVDVTRATSDERPVTATLM 371

Query: 338 GPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
           G D    +  + +A  + T +Y+L+ R+G    +
Sbjct: 372 GRDGEESVPAESLAGWAQTIHYELVTRLGAHLKR 405


>gi|146743648|gb|ABQ43055.1| alanine racemase [Borrelia burgdorferi]
          Length = 357

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 78/350 (22%), Positives = 147/350 (42%), Gaps = 23/350 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKKINYFGLSNIEDAKTLKKIDKNIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K  +         L++D G NR G+ + +
Sbjct: 81  YIKVDKKEIKNLIKFELVPFVADFEYLFSIEKECTLQKNKIKVHLKIDIGMNRYGIKIDD 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  + SHL   ++        Q+E+F   +      +       +
Sbjct: 141 ALEIATYIQNSKFLELEGVCSHLPSTENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    +  F + RPG+ LYG         P    + V++  +++I I+    GE
Sbjct: 199 SNSGHIINYKLSPQFNMVRPGLILYGYCQSQKNKKPALNFKPVLSLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 259 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
           + M++ + +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG
Sbjct: 308 VCMNLAIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIG 357


>gi|171315773|ref|ZP_02905005.1| alanine racemase [Burkholderia ambifaria MEX-5]
 gi|171099072|gb|EDT43852.1| alanine racemase [Burkholderia ambifaria MEX-5]
          Length = 378

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 77/377 (20%), Positives = 141/377 (37%), Gaps = 35/377 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +I+  A+  N     +L     +   V K + +G G   +A    +AGV  F V 
Sbjct: 15  RPAWAEINRGAIAENLAVARSLVRDGVKVYFVCKGDGFGFGAATVARLAADAGVDGFCVG 74

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S EEG  +R       + +     P     +     + +  ++  +      +  G++  
Sbjct: 75  SPEEGAAIRAAGINHEVLLFASTLPEDAARVA---SLGLTVTIQSMESLHAFVRAGIAVD 131

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             +++D GF R G    +  +       + + +L  I +HL+   D    V   Q   F 
Sbjct: 132 AFVEIDPGFGRFGFLPSQWQEAFRALAAQSVVRLKGIYTHLSSPGD--DTVTGRQAGVFD 189

Query: 184 TLISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV-- 236
             ++      +  +   LASS  ++  P   ++   PG  LYG  D+          +  
Sbjct: 190 AALADARASGFDDVTTMLASSRVMISHPELSYRAVDPGRLLYGALDREWMERVPLRPMLR 249

Query: 237 TAEARIILIRKALAGE--LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
              ARII +++  AG    + Y    +L R   + V  IG+ DG               V
Sbjct: 250 AVRARIIHVQQHPAGSMLGIGYAAPIRLERAMRVGVVPIGFGDGL------------NHV 297

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   ++G    +LG+ ++  T+ D+TD     +G  + + G D    I +D++A   
Sbjct: 298 PPLGHVLVRGVQARVLGRRSLQHTVIDLTDLPDAGIGSVVTLVGEDGAERITIDELADTL 357

Query: 351 GTTNYDLLVRIGTRYAK 367
                +LL     R  +
Sbjct: 358 KLPVMELL----PRLVR 370


>gi|226327902|ref|ZP_03803420.1| hypothetical protein PROPEN_01783 [Proteus penneri ATCC 35198]
 gi|225203606|gb|EEG85960.1| hypothetical protein PROPEN_01783 [Proteus penneri ATCC 35198]
          Length = 407

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 84/359 (23%), Positives = 143/359 (39%), Gaps = 30/359 (8%)

Query: 8   RLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ++I  +AL  N   + +L G+ +   AV+K +AYG     +AP +    VQ   VT+ +
Sbjct: 44  WIEISRSALDFNVKKVQSLLGDKSSLCAVLKGDAYGHDLSLVAPVMIENNVQCIGVTNNQ 103

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHPYA 125
           E  ++R    Q R+  +      +       N+  +I ++       +         P  
Sbjct: 104 ELKEVRDLGFQGRLMRVRNATEQEMAQATSYNVEELIGNLDMAKKLDAIAKQQNKVIPIH 163

Query: 126 LQVDTG-FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L +++G  +R GL +             +L  L ++       ++ +  V    L RF+ 
Sbjct: 164 LALNSGGMSRNGLEVNNKAGLEEAKQIAQLANLKVVGIMSHYPEEDADKV-REDLARFKQ 222

Query: 185 LISH--------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                        K +   +A++   +  P     + R G   YG       S   + V+
Sbjct: 223 QSQKVLDVTGLNPKEVTLHMANTFATITVPGSWLDMVRVGGIFYG---DTIASTDYKRVM 279

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  I     G  V Y     L RDS++A   +GYADGY    S            
Sbjct: 280 TFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN----------- 328

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I G  VP+LGK +M+  + DITD  +I+ GD +  FG     +I  +++   SG
Sbjct: 329 AGHALIGGQRVPVLGKTSMNTVIVDITDLKNIKSGDEVVFFGKQGNAEITAEEIEDISG 387


>gi|219684698|ref|ZP_03539641.1| alanine racemase [Borrelia garinii PBr]
 gi|219672060|gb|EED29114.1| alanine racemase [Borrelia garinii PBr]
          Length = 366

 Score =  182 bits (463), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 144/357 (40%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I        +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVATLKGDAYGHGLINIFKFFKEKKINYFGLSNIEDAKTLKKIDKNIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECALQKKKIKVHLKIDIGMNRYGIRIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N +  +L  + SHL   ++        Q+E+F  ++      +       +
Sbjct: 141 ALEIATYIQNSQFLELEGVCSHLPATENF--ETTQKQIEKFLLVLETLKQKNINPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +         + V+   +++I I+    GE
Sbjct: 199 SNSGHIINYKINPQFNMVRPGLILYGYCQSLKNKKTTLNFKPVLNLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  ++                 I      I GK
Sbjct: 259 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNINN-----------NFYFLINNQKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L +  G  ++I    + +D ++  S  ++Y+LL  IG    + Y
Sbjct: 308 VCMNLTIVEIPKDLKVRTGSKVEIVSEKLSIDKMSKFSKRSHYELLCNIGKYEKRKY 364


>gi|111114981|ref|YP_709599.1| alanine racemase [Borrelia afzelii PKo]
 gi|216263804|ref|ZP_03435798.1| alanine racemase [Borrelia afzelii ACA-1]
 gi|110890255|gb|ABH01423.1| alanine racemase [Borrelia afzelii PKo]
 gi|146743656|gb|ABQ43059.1| alanine racemase [Borrelia afzelii PKo]
 gi|215979848|gb|EEC20670.1| alanine racemase [Borrelia afzelii ACA-1]
          Length = 366

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 77/357 (21%), Positives = 146/357 (40%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I        +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVATLKGDAYGHGLINIFKFFKAKKINYFGLSNIEDAKTLKKIDKSTKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECALQKKKIKVHLKIDVGMNRYGIKIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N K  +L  + SHL   ++    +   Q+E+F   +      +       +
Sbjct: 141 ALEIATYIQNSKFLELEGVCSHLPTTENF--KITQKQIEQFLFFLETLKQKNINPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +         + V+   ++++ I+    GE
Sbjct: 199 SNSGHIINYKLNPQFNMVRPGLILYGYCPTLKNKKTTLNFKPVLNLFSKVVFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  ++                 I      I GK
Sbjct: 259 KISYSGTFQAKEDMKIGIIPIGYFDGIPQNINN-----------NFYFLINNKKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I   L +E G  ++I    + +++++  S  ++Y+LL  IG    + Y
Sbjct: 308 VCMNLTIVEIPKDLKVETGSKVEIVSEKLSINEMSKFSKRSHYELLCNIGKYENRKY 364


>gi|178847612|pdb|3CO8|A Chain A, Crystal Structure Of Alanine Racemase From Oenococcus Oeni
 gi|178847613|pdb|3CO8|B Chain B, Crystal Structure Of Alanine Racemase From Oenococcus Oeni
          Length = 380

 Score =  182 bits (461), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 136/377 (36%), Gaps = 28/377 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +   R++   ++L  N      +SG       VK NAYG G  +++      GV    V+
Sbjct: 7   HRSTRIEFSKSSLAYNVQYTKQVSGAKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVS 66

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++EG+ +R       I +L  I      I    + +  +SS+  L    K++       
Sbjct: 67  VLDEGIAIRQAGIDDFILILGPIDVKYAPIASKYHFLTTVSSLDWLKSADKILGKEK-LS 125

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLER 181
             L VDTG NR+G+  ++ L        +     S   I +H A +D+P  H    Q  R
Sbjct: 126 VNLAVDTGXNRIGVRSKKDLKDEIEFLQEHSDHFSYDGIFTHFASSDNPDDHYFQRQKNR 185

Query: 182 FRTLISHYKGIEASL--ASSSGILLGPNYHFQ--LTRPGISLYGGTDKINKSHPMQ---T 234
           +  LI             S +             + R G  +YG         P+     
Sbjct: 186 WYELIDGLIXPRYVHVXNSGAAXYHSKELPGCNSIARVGTVVYGVEPSEGVLGPIDKLKP 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V   ++ +  ++K  AGE +SYG +   +RD+ I    IGY DG+               
Sbjct: 246 VFELKSALTFVKKIPAGEGISYGSKFVTSRDTWIGTLPIGYGDGWLAEYQDFQL------ 299

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
                  I G     +G+I  D     +       +G  + + G     +  L D+   S
Sbjct: 300 ------LIDGQKCRQVGQIAXDQXXVALPHEYP--IGTEVTLIGKSGKYENTLYDLHKHS 351

Query: 351 GTTNYDLLVRIGTRYAK 367
           G   + + V    R  +
Sbjct: 352 GVPPWKITVAFSDRLKR 368


>gi|323190084|gb|EFZ75362.1| alanine racemase [Escherichia coli RN587/1]
          Length = 261

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 84/272 (30%), Positives = 130/272 (47%), Gaps = 18/272 (6%)

Query: 103 ISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLII 161
           + +  QL    +  S        +++DTG +RLG+  ++A  F H  +  K + Q   I+
Sbjct: 1   MHNEEQLAALEE-ASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIV 59

Query: 162 SHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG 221
           SH A AD+P       QL  F T      G + S+A+S GILL P  HF   RPGI LYG
Sbjct: 60  SHFARADEPKCGATEKQLAIFNTFCEGKPG-QRSIAASGGILLWPQSHFDWVRPGIILYG 118

Query: 222 GTD----KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
            +             Q V++  + +I +R+  AGE V YGG     RD+ + V A+GY D
Sbjct: 119 VSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD 178

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           GYP                G    + G  VPI+G++ MDM   D+      + GD + ++
Sbjct: 179 GYPRAA-----------PSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILW 227

Query: 338 GPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G  + ++ +A  +  + Y+L+ R+ +R A  Y
Sbjct: 228 GEGLPVERIAEMTKVSAYELITRLTSRVAMKY 259


>gi|51598420|ref|YP_072608.1| alanine racemase [Borrelia garinii PBi]
 gi|51572991|gb|AAU07016.1| alanine racemase [Borrelia garinii PBi]
 gi|146743654|gb|ABQ43058.1| alanine racemase [Borrelia garinii PBi]
          Length = 366

 Score =  181 bits (460), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 78/357 (21%), Positives = 146/357 (40%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I        +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVATLKGDAYGHGLINIFKFFKEKKINYFGLSNIEDAKTLKKIDKNIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECAFQKKKIKVHLKIDIGMNRYGIRIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N +  +L  I SHL   ++        Q+E+F  ++      +       +
Sbjct: 141 ALEIATYIQNSQFLELEGICSHLPATENF--KTTQKQIEKFLLVLETLKQKNINPKFIHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +         + V+   +++I I+    GE
Sbjct: 199 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKTTLNFKPVLNLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  ++                 I      I GK
Sbjct: 259 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNINN-----------NFYFLINNQKCKIKGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++T+ +I  +L + +G  ++I    + +D ++  S  ++Y+LL  IG    + Y
Sbjct: 308 VCMNLTIVEIPKNLKVRIGSKVEIVSEKLSIDKMSKFSKRSHYELLCNIGKYEKRKY 364


>gi|146743650|gb|ABQ43056.1| alanine racemase [Borrelia burgdorferi]
          Length = 352

 Score =  181 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 77/347 (22%), Positives = 144/347 (41%), Gaps = 23/347 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 19  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKKINYFGLSNIEDAKTLKKIDKNIKILM 78

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ + +
Sbjct: 79  YIKVDKKEIKNLIKFELVPFVADFEYLFSIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 138

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  + SHL   ++        Q+E+F   +      +       +
Sbjct: 139 ALEIATYIQNSKFLELEGVCSHLPSTENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 196

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP---MQTVVTAEARIILIRKALAGE 252
           ++S  I+    +  F + RPG+ LYG         P    + V++  ++II I+    GE
Sbjct: 197 SNSGHIINYKLSPQFNMVRPGLILYGYCQSPKNKKPALNFKPVLSLFSKIIFIKNVKKGE 256

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  +S                 I      I GK
Sbjct: 257 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNISNDF-----------YFLINNKKCKIRGK 305

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
           + M++ + +I   L ++ G  ++I    + +D+++  S  ++Y+LL 
Sbjct: 306 VCMNLAIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLC 352


>gi|313677342|ref|YP_004055338.1| alanine racemase [Marivirga tractuosa DSM 4126]
 gi|312944040|gb|ADR23230.1| alanine racemase [Marivirga tractuosa DSM 4126]
          Length = 395

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 147/393 (37%), Gaps = 44/393 (11%)

Query: 9   LKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + +  +A++ N   +   L+ N   +AV+K NAYG G + + P   +A V+   V S  E
Sbjct: 11  ITLSKSAVRQNVRFVRKRLAENVLLSAVLKGNAYGHGIKGMVPLFESANVKHLSVFSTHE 70

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIF--DTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
             ++     +    ++ G    +E      +     V              +        
Sbjct: 71  AEQVCQVKKKTTEVMIMGWMEDEETEWAIENEVEFYVFEMGRLKAALHYAKTLNKIAKIH 130

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV--QLERFR 183
           ++V+TG NR G   +   +              + +       +  ++   V  Q+++++
Sbjct: 131 VEVETGMNRTGFEEEHLEELMQMMKENHEYISFVGLCTHYAGAESITNYLRVVDQIKKYK 190

Query: 184 TLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK---------- 228
            +      +         A S+  +  P     + R GI LYG                 
Sbjct: 191 KIYDLFVENDLVPKRRHTACSAAAMSYPETQMDMVRIGILLYGFWPSQETFIAYQRSNGH 250

Query: 229 ---------SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
                     HP++ V++  ++I+ +++   GE + YG   + T+   IA   +GYA G+
Sbjct: 251 GQDGLDRKVRHPLKRVISWRSKIMSVKEVPVGEFIGYGTSYQATKKMKIATVPVGYAYGF 310

Query: 280 PLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP 339
             +LS             G+  + G  V ++  + M++ + ++T+  ++  GD + + G 
Sbjct: 311 ARSLSNQ-----------GRVIVNGKRVAVISTVNMNLMIINVTECKNVGKGDEVIMIGS 359

Query: 340 ----DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
               ++ +      S   NY+LL R+     + 
Sbjct: 360 NGKVNVTVASFGELSNQLNYELLSRLPMDIPRR 392


>gi|50954713|ref|YP_062001.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951195|gb|AAT88896.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 370

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 139/379 (36%), Gaps = 42/379 (11%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    R  +DL AL+ N  ++  L   A T   VK +AYG G   IA A   AG     V
Sbjct: 8   AEPLPRAVVDLAALRRNVATLTRLIAPAETMLAVKADAYGHGLLPIAEAGVQAGATSLAV 67

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             +  G+ LR       +           +   + ++   IS+  QL   +   +   + 
Sbjct: 68  LEISAGLVLRRAGVTVPLLAWLHGTGTDWRAGIENDIQLGISARWQLEAIAAAAADRAAI 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+VDTG +R G + +E       +   +   +  + +  +   D S   +   L  F
Sbjct: 128 V-HLKVDTGLSRNGATREEWPALVDAALALQETGVVRLRAAWSHLADASIADDEAALAEF 186

Query: 183 RTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQT 234
           R  ++  +          LA+SS  +  P   F L R GI+ YG +   +       ++ 
Sbjct: 187 REAVAEAEARGARFEMLHLAASSAGIRMPEARFALVRFGIAAYGLSPFDDTTGAELGLRP 246

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           V+  EA +I +            G   +          IG+ADG P              
Sbjct: 247 VMRLEAPVIAVH---------VDGTTHVR-------LGIGFADGVP-----------TLG 279

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALAS 350
                  + G   P++  +  D  + D   +  +E GD   +FGP    +   ++ A  +
Sbjct: 280 LARTSVLLGGRRCPVI-AVEADAMLVDAG-AQRVERGDTAVLFGPGDSGEATAEEYAEWA 337

Query: 351 GTTNYDLLVRIGTRYAKFY 369
           GT   +++  +  R  + Y
Sbjct: 338 GTIADEMVTGVAARVPRVY 356


>gi|268589404|ref|ZP_06123625.1| alanine racemase [Providencia rettgeri DSM 1131]
 gi|291315242|gb|EFE55695.1| alanine racemase [Providencia rettgeri DSM 1131]
          Length = 409

 Score =  180 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 80/359 (22%), Positives = 139/359 (38%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             ++I   AL  N   +  L G+ +   AV+K +AYG     + P +    VQ   VT+ 
Sbjct: 45  AWIEISRGALDFNIKKVQNLLGDKSSLCAVLKGDAYGHDLSLVTPIMIENNVQCIGVTNN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R    + R+  +      +           +I ++      + +        P 
Sbjct: 105 QELKTVRDLGFKGRLMRVRSATEQEMAQATQYETEELIGNLAMAQRLNAIAKKQNKVIPI 164

Query: 125 ALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++     N L +S    LD           ++  I+SH    D+     +  + ++
Sbjct: 165 HLALNSAGMSRNGLDVSSASGLDEAKQIAELSQLKIVGIMSHYPEEDEAQIRKDLAKFKK 224

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               + +  G++       +A++   +  P     + R G   YG T   N     + V+
Sbjct: 225 ESQQVLNVTGLKREDITLHVANTYATITVPESWLDMVRVGGIFYGDTVATND---YKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDS++A   +GYADGY    S            
Sbjct: 282 TLKSNIASVNHYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I G  VP+LGK +M+  M D+TD   +  GD +  FG     +I  ++V   SG
Sbjct: 331 AGHALINGQTVPVLGKTSMNTVMVDVTDLKYVSPGDEVVFFGKQGHAEITAEEVEDISG 389


>gi|238022778|ref|ZP_04603204.1| hypothetical protein GCWU000324_02689 [Kingella oralis ATCC 51147]
 gi|237865981|gb|EEP67117.1| hypothetical protein GCWU000324_02689 [Kingella oralis ATCC 51147]
          Length = 410

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 79/375 (21%), Positives = 139/375 (37%), Gaps = 28/375 (7%)

Query: 8   RLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+ID  A   N  ++  + G   +  AV+K +AYG   E + P +    +    +TS +
Sbjct: 47  WLEIDAAAFGRNLEAVKKMLGGKQKICAVIKGDAYGNSIELLMPQIIKHKIPCVGITSND 106

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYA 125
           E   +R    +  +  L     G+ +  F  N+  +  ++          +  G      
Sbjct: 107 EARVVRASGYKGTVARLRTTTLGEIEDGFQYNIEELFGNLKAAQLADAAAAKRGKKLNIH 166

Query: 126 LQVDTG---FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS-----SHVNSV 177
           L ++ G    N L L  +                +  I++H    D           +  
Sbjct: 167 LALNAGGMDRNGLALDTESGKADALAIAKLPHLNIVGIMTHFPVEDVADVKKGVQRFDEQ 226

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
                +        +    A+S   +  P   F + RPG  LYG   +      ++ V+ 
Sbjct: 227 SKWLIQAAKLDRSKLTLHTANSFTTVSVPEGRFDMVRPGALLYG---EPIGGKQLEYVMA 283

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
            ++R+  + +   G  V Y     L RDS +A    GY+DGY    +             
Sbjct: 284 FKSRVGSVNRYPKGSTVGYDRTFTLKRDSRLANLPFGYSDGYRRAFTN-----------K 332

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD----DVALASGTT 353
           G   I+G+ VP++GKI+M+ TM D+TD   I+  D + IFG   K +    ++   +   
Sbjct: 333 GHVLIRGHKVPVVGKISMNTTMVDVTDFPDIQANDEVVIFGKQGKAEIKQSEIEEIADVL 392

Query: 354 NYDLLVRIGTRYAKF 368
             D+    G    K 
Sbjct: 393 FADIYTVWGNSNPKI 407


>gi|224534199|ref|ZP_03674777.1| alanine racemase [Borrelia spielmanii A14S]
 gi|224514301|gb|EEF84617.1| alanine racemase [Borrelia spielmanii A14S]
          Length = 372

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 77/351 (21%), Positives = 143/351 (40%), Gaps = 23/351 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I        +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFFKAKKINYFGLSNIEDAKTLKKIDKSTKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 87  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECALQKKKIKVHLKIDVGMNRYGIKIGS 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  + SHL   ++    +   Q+E+F   +      +       +
Sbjct: 147 ALEIAKYIQNSKFLELEGVCSHLPTTENF--KITQKQIEQFLFFLETLKQKNINPKFIHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +         + V+   ++++ I+    GE
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYYPSLKNKKTTLNFKPVLNLFSKVVFIKNVKKGE 264

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  ++                 I      I GK
Sbjct: 265 KISYSGTFQAKEDMQIGIIPIGYFDGIPQNINN-----------NFYFLINNKKCKIRGK 313

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           + M++T+ +I   L +E G  ++I    + +D+++  S  + Y+LL  IG 
Sbjct: 314 VCMNLTIVEIPKDLKVETGLKVEIVSEKLSIDEMSKFSKRSPYELLCNIGK 364


>gi|219685888|ref|ZP_03540693.1| alanine racemase [Borrelia garinii Far04]
 gi|219672556|gb|EED29590.1| alanine racemase [Borrelia garinii Far04]
          Length = 366

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/357 (21%), Positives = 142/357 (39%), Gaps = 23/357 (6%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G       +K +AYG G   I        +  F ++++E+   L+      +I +
Sbjct: 21  IKNKIGEKEIVVTLKGDAYGHGLINIFKFFKEKKINYFGLSNIEDAKTLKKIDKNIKILM 80

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P ++    L    K            L++D G NR G+ +  
Sbjct: 81  YIKVDKKEIKNLIKLELLPFVADFEYLFLIEKECALQKKKIKVHLKIDIGMNRYGIRIDS 140

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS-----HYKGIEASL 196
           AL+      N +  +L  I SHL   ++        Q+E+F  ++      +       +
Sbjct: 141 ALEIATYIQNSQFLELEGICSHLPATENF--KTTQKQIEKFLLVLETLKQKNINPKFVHI 198

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAEARIILIRKALAGE 252
           ++S  I+    N  F + RPG+ LYG    +         + V+   +++I I+    GE
Sbjct: 199 SNSGHIINYKINPQFNMVRPGLILYGYCQSLKNKKTTLNFKPVLNLFSKVIFIKNVKKGE 258

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            +SY G  +   D  I +  IGY DG P  ++                 I      I GK
Sbjct: 259 KISYSGIFQAKEDMKIGIIPIGYFDGIPQNINN-----------NFYFLINNQKCKIRGK 307

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + M++ + +I   L +  G  ++I    + +D ++  S  ++Y+LL  IG    + Y
Sbjct: 308 VCMNLAIVEIPKDLKVRTGSKVEIVSEKLSIDKMSKFSKRSHYELLCNIGKYEKRKY 364


>gi|291541767|emb|CBL14877.1| alanine racemase [Ruminococcus bromii L2-63]
          Length = 394

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 86/396 (21%), Positives = 149/396 (37%), Gaps = 52/396 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           ++IDL  +  N  ++     + +   AV+K + YG G  ++A  +Y  G+  F V+S+EE
Sbjct: 6   VEIDLDKIGANARAITQKYSDYKYFIAVLKGDGYGHGM-EVANEMYKNGINYFAVSSLEE 64

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
               R     A +  L+ +H  + +       + +  +          ++   +    LQ
Sbjct: 65  AQSFRKVNKDAPLLCLHPVHLSRIE-EAKRLNLTIAVNELDYLKRLLDLNIDCNFKVHLQ 123

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTGFNRLG   +  +    +  N     L  I  H A A          Q+  F+ L S
Sbjct: 124 IDTGFNRLGFKDKNEVKTAVDMINGSNFVLEGIYQHFATA-GIFDPHWDEQVRNFKELTS 182

Query: 188 --HYKGIEASLASSSGILL-GPNYHFQL-TRPGISLYGGTDKINK--------------- 228
               K I      SS  +L  P   F    R GI++YG     +                
Sbjct: 183 LIDLKKIPIVHMGSSVSMLTHPKQPFTTGVRMGIAIYGYNVAPDSLSNSPKDKLRKMRNN 242

Query: 229 ---------------SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAI 273
                             +Q  +  + RI+ ++K   GE   Y        D ++A+  +
Sbjct: 243 YFIKKYNISETYFDVKIDLQPAMKMKTRILQLKKVNKGEWFGYNASYTADEDIILAILPV 302

Query: 274 GYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
           GY +G                    +  I G   P++G++ M+MT   +    S+++ D 
Sbjct: 303 GYNNGIGHANHNR------------QVVINGKKYPVVGEMCMNMTAVKV--DSSVKIDDE 348

Query: 334 IQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + + G  I +     +SG  N + LV IG    +FY
Sbjct: 349 VTLLGDGITVGMFGRSSGMGNAEALVNIGKNNPRFY 384


>gi|296161155|ref|ZP_06843965.1| alanine racemase [Burkholderia sp. Ch1-1]
 gi|295888678|gb|EFG68486.1| alanine racemase [Burkholderia sp. Ch1-1]
          Length = 390

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 82/358 (22%), Positives = 131/358 (36%), Gaps = 31/358 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                ++D  A+  N        G+  +   V K + +G G  K+A     AGV  F V 
Sbjct: 19  RPSWAELDYGAIAANLAVAREQVGHATKIYFVCKGDGFGFGAAKVARLAAQAGVDGFCVG 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S EEGV +R       I +     P     +    L     ++         +  GV+  
Sbjct: 79  SPEEGVAIRRAGIDRDILLFASTLPEDAAQVAALGLTV---TIQSQESLHAFIDAGVAVD 135

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF- 182
             L++D GF R G    +         ++   +L  + +HL+  ++    V   Q   F 
Sbjct: 136 AFLEIDPGFGRFGFLPSQWQAAFAALRDQSTVRLKGVYTHLSSPEN--DDVTRQQAGVFD 193

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV-- 236
                   + +  I   LASS  +L  P+  +Q   PG  LYG  D           +  
Sbjct: 194 AALADARAAGFDNITTMLASSRVMLAHPHLAYQAVDPGRLLYGALDAEWMVRAPLRPMLR 253

Query: 237 TAEARIILIRKALAGEL--VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
               RII +++  AG    + Y    +L R   I V  IG+ DG               V
Sbjct: 254 AVRGRIIHVQEHPAGSTLGIGYAEPIRLERGVRIGVVPIGFWDGL------------NHV 301

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
              G+  + G    ILG+ +   T+ DIT+      G  + + G D    I +D++A 
Sbjct: 302 PPLGRVLVHGQAARILGRRSFQHTVIDITEIAQARTGSVVTLLGQDGDQSITIDEMAE 359


>gi|326442666|ref|ZP_08217400.1| alanine racemase [Streptomyces clavuligerus ATCC 27064]
          Length = 330

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/348 (22%), Positives = 129/348 (37%), Gaps = 35/348 (10%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           +   A   AVVK NAYG G   +A A   AG +   V ++ EG+ LR   P+ARI VL  
Sbjct: 1   MVDGAELWAVVKGNAYGHGAVPVAGAALEAGARALCVATLGEGLALRERFPRARIVVLGP 60

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
           + PG         L  V      L   S       +  Y ++V+ G NR G         
Sbjct: 61  VGPGSVPAASRAGLECVAHDDASLEALSG------AVEYHIKVNLGLNRYGFD------- 107

Query: 146 THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLG 205
                 ++           A  D     V ++QL RF             + +SS  L  
Sbjct: 108 RIPDRLREQPVGVFGQFSHAHVD---LEVTALQLARFLEQCEAVPRATRHVCNSSAALSL 164

Query: 206 PNYHFQLTRPGISLYGGTDKINKS--HPMQTVVTAEARIILIRKALAGELVSYGGQKKLT 263
           P       R G +L G +   N S   P++  ++  + +  +R   AG  V Y G  ++T
Sbjct: 165 PAARLDAVRSGSALLGVSLMTNPSSRLPLRPALSWISCLAQVRNLPAGAAVGYEGAHRVT 224

Query: 264 RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT 323
           R ++  V  +GY DG+   L            +G    +      ++G ++MD     + 
Sbjct: 225 RPTVTGVVPVGYGDGFVSRL------------VGTTVLVGDEPATVIGSVSMDALTVALP 272

Query: 324 DSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT---RYAKF 368
                 +G  + + G  + ++     +   N++L   +     R  + 
Sbjct: 273 RRFP--IGTPVTLIGDGLPMESHLRFASMANWELCTGLSNDPLRVHRR 318


>gi|332982771|ref|YP_004464212.1| alanine racemase [Mahella australiensis 50-1 BON]
 gi|332700449|gb|AEE97390.1| alanine racemase [Mahella australiensis 50-1 BON]
          Length = 366

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 78/379 (20%), Positives = 143/379 (37%), Gaps = 38/379 (10%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L++D  A+ +N  ++    G     AVVK NAYG G  +++  L +AGV+ F V  ++EG
Sbjct: 6   LEVDKRAIIDNLETVRKEVG-VSVMAVVKGNAYGHGAVEVSATLADAGVEWFGVEFLDEG 64

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKI-IFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V+LR    + RI    G     +     + ++ P + ++      + +     +     L
Sbjct: 65  VRLRESGIEGRILCFTGPVDKDDCRAFIEYDITPAMYNLDAAAMLNDVAEEEDIMFKVHL 124

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           + DTG  R G +  E           +  +     +H A A         +QLERF   +
Sbjct: 125 KFDTGMGRFGFTYDELDGVIDRLKAFEHLEYEGAFTHFAAAFAKKPDYTLLQLERFNKCM 184

Query: 187 S--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                 GI+  +  ++     +  P     + R G +L+G     N+S  ++     +A 
Sbjct: 185 DKLETGGIKVQIRHAANSVAAMDFPQARLDMVRVGGALFGTAMFKNRSVKLKKTALLKAI 244

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK-- 299
           ++ +R    G  + YG   + ++   I V   GY +G  +            + +     
Sbjct: 245 LMDVRDMPKGAYIGYGCTYRTSKPMRIGVIPFGYFEGLKVQRRNYAFHFLDLLRILYHDI 304

Query: 300 ---------GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALAS 350
                     F  G  + ILG+I + + + D++       GD + +    I LDD     
Sbjct: 305 MDYLRPVPIVFKDGRPLRILGRIGLQLAVVDLSGV-DAHPGDEVSVAIDPIYLDD----- 358

Query: 351 GTTNYDLLVRIGTRYAKFY 369
            T              + Y
Sbjct: 359 -T------------VPRVY 364


>gi|322805978|emb|CBZ03545.1| alanine racemase [Clostridium botulinum H04402 065]
          Length = 256

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 26/253 (10%)

Query: 132 FNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
             RLG     E+L+      +    ++  + SH + +D+     +  Q + F+       
Sbjct: 1   MGRLGFDPTVESLEEIKRIQDLSNIKIEGLSSHFSSSDENDKSYSEYQFKIFQNFRKKLI 60

Query: 191 GIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARI 242
           GI        +++S+ I+  P+ +    R GI LYG    +    ++  ++ V+T +A I
Sbjct: 61  GINMKIPIYHMSNSAAIIDLPSTYLDAVRAGIILYGYYPSMEVNKENLHIKQVMTLKANI 120

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           + I+   +G+ V Y  + K  R S IA+  +GY DGY   LS             GK  I
Sbjct: 121 VHIKTIDSGKYVGYNRKFKTKRKSKIAILPLGYGDGYTRFLSNR-----------GKVII 169

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD------IKLDDVALASGTTNYD 356
            G   PI+G I MD  M D+TD   ++VGD + I G D         +D+A   G T+ +
Sbjct: 170 NGQYAPIVGNICMDQCMIDVTDIKEVKVGDEVIIIGKDNINNLRYDAEDIASKVGMTSGE 229

Query: 357 LLVRIGTRYAKFY 369
           ++  I  R  + Y
Sbjct: 230 IMSIISKRVPRVY 242


>gi|308234831|ref|ZP_07665568.1| alanine racemase [Gardnerella vaginalis ATCC 14018]
          Length = 356

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 85/335 (25%), Positives = 137/335 (40%), Gaps = 36/335 (10%)

Query: 71  LRLYTPQA-RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS----HPYA 125
           LR     + R  +L  +      +  D     +  SV  L     +     S        
Sbjct: 1   LRACGIDSSRCRILTWLTSAPTSLFADLINADIDISVGSLDSIDAVALAAKSVGAAARIH 60

Query: 126 LQVDTGFNRLGLSLQ---EALDFTHNSFNKKLGQLSLIISHLACADDPSSH----VNSVQ 178
           ++VDTGF R G +     +AL+      ++ L ++    SHLA AD P           Q
Sbjct: 61  VKVDTGFGRNGFTPAGFSDALEKLSEYSSQGLIEVIGQWSHLAVADCPDVPEFVSSTDRQ 120

Query: 179 LERFRTLISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQ 233
           +E+F                  LA+++  L  P   F+L RPGI LYG         P  
Sbjct: 121 IEQFHDFTRRMCEAGLEPKIRHLANTAATLNRPEIRFELVRPGIGLYGYEPDPVMGVPQT 180

Query: 234 TV----VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                 +T +A++  ++   AG  +SYG       ++  A+  +GYADG     SG D +
Sbjct: 181 YDLRPAMTLQAQLGTVKSVEAGHGISYGRTYLTPDNTSTAIVPLGYADGILRAASGYDMQ 240

Query: 290 HSPSV-FLGGKGFI---KGYM-VPILGKITMDMTMFDI---TDSLSIEVGDYIQIFGP-- 339
            S  V   GG   +    G   + + G++ MD  + D+      L ++ GD +++FGP  
Sbjct: 241 GSRHVNKPGGPVRVETNNGARILHVSGRVCMDQFIVDLKGSAKELGVKEGDTVRLFGPGR 300

Query: 340 -----DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                +   DD A A+GT +Y+++  IG R  + Y
Sbjct: 301 GIEYAEPTADDWAAAAGTISYEIMTGIGPRVPRLY 335


>gi|254552529|ref|ZP_05142976.1| alanine racemase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
          Length = 277

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 10/275 (3%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+++N   +   +G+A+  AVVK + YG G  ++A     AG  +  V +V+E + 
Sbjct: 2   VDLGAIEHNVRVLREHAGHAQLMAVVKADGYGHGATRVAQTALGAGAAELGVATVDEALA 61

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQVD 129
           LR     A +                 ++   +SS+ Q       +   G +    ++VD
Sbjct: 62  LRADGITAPVLAWLHPPGIDFGPALLADVQVAVSSLRQLDELLHAVRRTGRTATVTVKVD 121

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSL---IISHLACADDPSSHVNSVQLERFRTLI 186
           TG NR G+   +                     ++SH+  AD P   +N VQ +RF   +
Sbjct: 122 TGLNRNGVGPAQFPAMLTALRQAMAEDAVRLRGLMSHMVYADKPDDSINDVQAQRFTAFL 181

Query: 187 SHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK-SHPMQTVVTAEA 240
           +  +        A L++SS  +  P+  F L RPGI++YG +         +   +T + 
Sbjct: 182 AQAREQGVRFEVAHLSNSSATMARPDLTFDLVRPGIAVYGLSPVPALGDMGLVPAMTVKC 241

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY 275
            + L++   AGE VSYG      RD+ +A+  IGY
Sbjct: 242 AVALVKSIRAGEGVSYGHTWIAPRDTNLALLPIGY 276


>gi|116617542|ref|YP_817913.1| alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116096389|gb|ABJ61540.1| alanine racemase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 373

 Score =  176 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 77/383 (20%), Positives = 156/383 (40%), Gaps = 28/383 (7%)

Query: 1   MHSNEFLR---LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M+ N   R   +++  +A+ +N   +   +      AV+K NA+  G  ++A     AG 
Sbjct: 1   MNYNAPHRHAVIELSQSAVVHNLKVIKENTHAKEIMAVLKANAFSHGLPEMASLSITAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL-M 116
             F +  ++E + LR       I VL    P   ++  + N+    S+   +   ++   
Sbjct: 61  TRFGMAMLDEALILRDLGYIQPIDVLGLTDPRYARLAAERNITLAFSTKESIKAAAEQLA 120

Query: 117 SCGVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
             G++   +L VDTG NR+G    ++ +        +       + +H A AD P+    
Sbjct: 121 GTGLTLKVSLPVDTGLNRIGFKSREDLVAAIQEVSAQDTLIFQSMWTHFATADTPNVDYV 180

Query: 176 SVQLERFRTLISH--YKGIEASLASSSGILLGPN-YHFQLTRPGISLYGGT---DKINKS 229
             Q+  ++ L      +  E   A++      P   +  + R GI L+G       ++  
Sbjct: 181 DFQISEWQRLTHDLPVEPNEKHFANTGIATWYPEKINTDIVRLGIGLFGINGSVPIMSMP 240

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +   ++ +A+++  +    G+ V YG +     D  +    IG++DGYP   SG+ + 
Sbjct: 241 FELIPALSLKAKVVNSKPLKKGDAVGYGAEYHAPNDGYLITIPIGHSDGYPFNGSGMRAL 300

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDD 345
            +            G +  I+G + MD +M  +T+   + VG  + + G      I + D
Sbjct: 301 VA-----------DGQIGHIVGGVAMDQSMILVTN--PVAVGTTVTLIGRVGDQSITMQD 347

Query: 346 VALASGTTNYDLLVRIGTRYAKF 368
           +A  + ++   L+     R  + 
Sbjct: 348 LAEHTQSSIVALMNDFAPRLQRI 370


>gi|103486714|ref|YP_616275.1| alanine racemase [Sphingopyxis alaskensis RB2256]
 gi|98976791|gb|ABF52942.1| alanine racemase [Sphingopyxis alaskensis RB2256]
          Length = 348

 Score =  175 bits (444), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 119/363 (32%), Positives = 181/363 (49%), Gaps = 23/363 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             LRL++D  AL  NW  +    G A   A +K + YGLG   +   L  AG +DFFV +
Sbjct: 6   PPLRLRLDSDALIANWRWLAGQGGAAACGAAIKADGYGLGARWVMERLAAAGCRDFFVAT 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E   L        + VL+G+              PV++SV Q+  +      G   P 
Sbjct: 66  WAEAAALMPLPQGISVSVLHGVGAADMVAARLLPARPVLNSVEQVQRW---RDSGEGRPC 122

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VDTG NRLGL ++E               + +++SHLA AD+     N+ QL  FR+
Sbjct: 123 DVMVDTGMNRLGLRVEEV-----MGGALDGLAIDILLSHLASADEDCGQ-NAAQLASFRS 176

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           L    +    SLA+S+GI LG +Y F LTRPGI+LYGGT +      ++ VV  E R++ 
Sbjct: 177 LRETIRARRYSLANSAGICLGADYAFDLTRPGIALYGGTPRREAQGHIRQVVYPETRVLQ 236

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           +R+  AGE V YG     + D+ +AV  +GYADGY    +G                 +G
Sbjct: 237 LREVRAGESVGYGATWTASTDTRVAVTNMGYADGYLRCHAGSGGATW-----------RG 285

Query: 305 YMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
             +P++G+++MD+T FD + +  +   D++ I   +  L   A ASG + Y+LL  +G+R
Sbjct: 286 QSLPLIGRVSMDLTAFDASSTEGLREDDWLAI---EYDLPTRAAASGLSQYELLTGLGSR 342

Query: 365 YAK 367
           + +
Sbjct: 343 FGR 345


>gi|115361255|ref|YP_778392.1| alanine racemase [Burkholderia ambifaria AMMD]
 gi|115286583|gb|ABI92058.1| alanine racemase [Burkholderia ambifaria AMMD]
          Length = 401

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 76/377 (20%), Positives = 139/377 (36%), Gaps = 35/377 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           E    +I+  A+  N     +L     +   V K + +G G   +A    +A V  F V 
Sbjct: 38  ESAWAEINRGAIAENLAVARSLVRDGVKIYFVCKGDGFGFGAATVARLAADARVDGFCVG 97

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S EEG  +R       + +     P     +     + +  ++  +      +  G++  
Sbjct: 98  SPEEGAAIRAAGINHEVLLFASTLPEDAARVA---SLGLTVTIQSMESLHAFVYAGIAVD 154

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF- 182
             +++D GF R G    +  +       + + +L  I +HL+        V   Q   F 
Sbjct: 155 AFVEIDPGFGRFGFLPSQWQEAFRALAAQSVVRLKGIYTHLSSP--GVDTVTGRQAGVFD 212

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV-- 236
                   + +  +   LASS  ++  P   ++   PG  LYG  D+          +  
Sbjct: 213 AALADARAAGFDDLTTMLASSRVMIAHPELSYRAVDPGRLLYGALDREWMERVPLQPMLR 272

Query: 237 TAEARIILIRKALAGE--LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
              ARII +++  AG    + Y    +L R   + V  IG+ DG               V
Sbjct: 273 AVRARIIHVQQHPAGSMLGIGYAAPIRLERAMRVGVVPIGFGDGL------------NHV 320

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALAS 350
              G   ++G    +LG+ ++  T+ D+TD     +G  + + G D    I +D++A   
Sbjct: 321 PPLGHVLVRGVQARVLGRRSLQHTVIDLTDLPDAGIGSVVTLVGEDGGKRITIDELADTL 380

Query: 351 GTTNYDLLVRIGTRYAK 367
                +LL     R  +
Sbjct: 381 KLPVMELL----PRLVR 393


>gi|46202740|ref|ZP_00052682.2| COG0787: Alanine racemase [Magnetospirillum magnetotacticum MS-1]
          Length = 228

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 12/237 (5%)

Query: 132 FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKG 191
            NRLGL ++EAL  + +    + G    ++SHL  A+ P   + + Q E F  + + +  
Sbjct: 1   MNRLGLRVEEALALSGDPVIARAGIDL-VMSHLVSAEQPDDPLTAHQAEAFARVRAAFPH 59

Query: 192 IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAG 251
           + ASLA+SSG  L  +    L RPG  L+GG  +  +++PM+ VV  EA I+ +R+  AG
Sbjct: 60  LRASLANSSGTCLADDARHDLLRPGYCLFGGNPEPGRANPMRPVVRLEATILQVRQVEAG 119

Query: 252 ELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILG 311
           E   Y  + +      +A  ++GYADGYP + S             G   + G + P+LG
Sbjct: 120 ETCGYNARWRAPAPRRLATLSLGYADGYPRSASNS-----------GHALVGGVLCPMLG 168

Query: 312 KITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
            I+MD+ + D+T +     G    + G  + +D V  A+GT  Y++L  +G+RY + 
Sbjct: 169 LISMDLIILDVTHAPEARRGGTATLIGDSLDIDTVGQAAGTIGYEILTGLGSRYVRI 225


>gi|69250348|ref|ZP_00605138.1| Alanine racemase [Enterococcus faecium DO]
 gi|68193971|gb|EAN08535.1| Alanine racemase [Enterococcus faecium DO]
          Length = 300

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 119/312 (38%), Gaps = 27/312 (8%)

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV---SHPYALQ 127
           +R       I +L  +      +    +L     +   L   + ++            L+
Sbjct: 1   MREAGFTQPILILNMVPYDALTVAVAHDLSVTAGTREWLQAAAAVLEKSKLETPLSIHLK 60

Query: 128 VDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            DTG  R+G    +E  +        ++ +   + +H + AD       ++Q ERF  ++
Sbjct: 61  ADTGMGRIGFCTPEEVKEAAAFIKESRVLEWEGLFTHFSTADQADDTYWNLQKERFIEVL 120

Query: 187 SHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEAR 241
                +   +   +S+  L        + R G+++YG       + + +P+Q  +   + 
Sbjct: 121 KKLPELPRYVHVSNSATALWHDETIGNMIRYGVAMYGLNPSGHALPEVYPLQPALELVSE 180

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +I ++K  AGE + YG          I    IGYADG+P  + G                
Sbjct: 181 LIQVKKLPAGEGIGYGETYITPEAEWIGTIPIGYADGWPRKMQGFSL------------L 228

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDL 357
           ++G     +G++ MD  M  +     +  G  + + G     +I + D+A   GT +Y++
Sbjct: 229 VEGNYCETIGRVCMDQLMIRLPQEFPV--GTKVTLIGKNADKEITMQDIADQLGTIHYEV 286

Query: 358 LVRIGTRYAKFY 369
              +G R  + Y
Sbjct: 287 ACGLGQRIPREY 298


>gi|325273199|ref|ZP_08139485.1| alanine racemase [Pseudomonas sp. TJI-51]
 gi|324101664|gb|EGB99224.1| alanine racemase [Pseudomonas sp. TJI-51]
          Length = 225

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 16/235 (6%)

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLA 197
             ++  +              +++SH A AD+  +   + Q+  F          E SL 
Sbjct: 1   HPKDYHEAYQRLLASGKVARIVLMSHFARADELDADATAQQIAVFEA-ARQGLAAECSLR 59

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKI---NKSHPMQTVVTAEARIILIRKALAGELV 254
           +S G+L  P       RPG+ LYG T       ++  +Q V+T ++R+I +R+  AG+ V
Sbjct: 60  NSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAARLQPVMTLQSRVISVRELPAGQPV 119

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314
            YG +    R + + V A+GYADGYP                G    + G   P++G+++
Sbjct: 120 GYGAKFVSPRPTRVGVVAMGYADGYPRQAPN-----------GTPVLVAGKRAPLIGRVS 168

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           MDM   D+TD     VG  ++++G  +   +VA  +GT  Y +   +  R    Y
Sbjct: 169 MDMLSIDLTDVPDATVGSPVELWGKQVLASEVAAQAGTIPYQIFCNL-KRVPLDY 222


>gi|261322850|ref|ZP_05962047.1| alanine racemase [Brucella neotomae 5K33]
 gi|261298830|gb|EEY02327.1| alanine racemase [Brucella neotomae 5K33]
          Length = 314

 Score =  173 bits (439), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 103/281 (36%), Positives = 146/281 (51%), Gaps = 15/281 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS-------------HPMQ 233
           +    + A+LA+S G  LG  Y+F L RPGI+LYG   +                 H + 
Sbjct: 201 ARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHENKKPKHSIL 260

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIG 274
            V+T  AR+I +R    G  V YGG         IA  A+G
Sbjct: 261 PVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVG 301


>gi|91779715|ref|YP_554923.1| alanine racemase [Burkholderia xenovorans LB400]
 gi|91692375|gb|ABE35573.1| Alanine racemase [Burkholderia xenovorans LB400]
          Length = 390

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 81/358 (22%), Positives = 132/358 (36%), Gaps = 31/358 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                ++D  A+  N        G   +   V K + +G G  K+A     AGV  F V 
Sbjct: 19  RPSWAELDYGAVAANLAVAREQVGRATKIYFVCKGDGFGFGAAKVARLAAQAGVDGFCVG 78

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           S EEGV +R       I +     P     +    L     ++         ++ GV+  
Sbjct: 79  SPEEGVTIRRAGIDRDILLFASTLPEDAAQVAALGLTV---TIQSRESLHAFINAGVAVD 135

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF- 182
             L++D GF R G    +         ++   +L  + +HL+  +     V   Q   F 
Sbjct: 136 AFLEIDPGFGRFGFLPSQWQAAFAALRDQSTVRLKGVYTHLSSPES--EDVTRQQAGVFD 193

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV-- 236
                   + +  +   LASS  +L  P+  +Q   PG  LYG  D    +      +  
Sbjct: 194 AALADARAAGFDNLTTMLASSRVMLAHPHLAYQAVDPGRLLYGALDADWMARAPLRPMLR 253

Query: 237 TAEARIILIRKALAGEL--VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
               RII +++  AG    + Y    +L R   I V  IG+ DG               V
Sbjct: 254 AVRGRIIHVQEHPAGATLGIGYAEPIRLERGVRIGVVPIGFWDGL------------NHV 301

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVAL 348
              G+  + G    ILG+ +   T+ DIT+  +   G  + + G D    I +D++A 
Sbjct: 302 PPLGRVLVHGQPARILGRRSFQHTVIDITEIAAARTGSVVTLLGQDGDQSITIDEMAE 359


>gi|261210961|ref|ZP_05925251.1| alanine racemase [Vibrio sp. RC341]
 gi|260839936|gb|EEX66536.1| alanine racemase [Vibrio sp. RC341]
          Length = 335

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 126/348 (36%), Gaps = 31/348 (8%)

Query: 37  KDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
           K +AYG G   + P +   G+    V S  E   +R    +  +  +      +   + D
Sbjct: 2   KADAYGNGIRGLMPTIIAQGIPCVGVASNAEARAVRESGFKGELMRVRSASLSEMSAVLD 61

Query: 97  TNLIPVISSVPQLTFYSKLMS-CGVSHPYALQ-VDTGFNRLGLSL------QEALDFTHN 148
            N+  +I +  Q    + L    G +    +   D G  R G+ +      +EAL     
Sbjct: 62  LNIEELIGTHQQAMELADLAKKTGKTIKVHMALNDGGMGRNGIDMTTEAGKKEALSIATQ 121

Query: 149 SFNKKLGQLSLIISHLACADDPSSH---VNSVQLERFRTLISHYKGIEASLASSSGILLG 205
                +G ++   +    AD+  +                    + I   +A+S   L  
Sbjct: 122 PSLNIVGMMTHFPN--YNADEVRTKLAKFKESSAWLIEQSNLKREDITLHVANSYTALNV 179

Query: 206 PNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD 265
           P     + RPG  LYG      +     ++V+ + R+  +     G  V Y      +RD
Sbjct: 180 PEAQLDMVRPGGVLYGDLPTNPE---YPSIVSFKTRVASLHHVPKGSTVGYDSTFTTSRD 236

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           S++A   +GY+DGYP  +                  + G    ++G  +M+ T+ D+TD 
Sbjct: 237 SVLANLPVGYSDGYPRKMGN-----------KADVLVNGQRAKVVGVTSMNTTVVDVTDI 285

Query: 326 LSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
             +  G  + ++G      I + ++   +     +L    G    +FY
Sbjct: 286 KGVLPGQEVALYGQQQKQSIAVSEMENNAELIFPELYTLWGNSNPRFY 333


>gi|332654258|ref|ZP_08420002.1| alanine racemase [Ruminococcaceae bacterium D16]
 gi|332517344|gb|EGJ46949.1| alanine racemase [Ruminococcaceae bacterium D16]
          Length = 400

 Score =  172 bits (435), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 85/380 (22%), Positives = 139/380 (36%), Gaps = 36/380 (9%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
           L +D+  ++ N  ++      A+   V+KDNAYGLG E +   +     +    V  V E
Sbjct: 38  LSVDMKRVRRNVATVLEELQGAQLIPVLKDNAYGLGLEAMGHVMEEFPQITTLAVAQVGE 97

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTN-LIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           G  LR       I +L G+     +   + +  + V              S G      +
Sbjct: 98  GAALRQAGITREILILGGVPAHLLRAAVELDLTLSVGRLELLPVLALLGQSAGRRVKIQI 157

Query: 127 QVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++TG NR G+    E         + +     +       AD   +     Q E F   
Sbjct: 158 KIETGLNRTGVMPGAELAHLLEEWRSARNHFQIMGAFSH-FADLEDTERTRQQYELFLEG 216

Query: 186 ISH-----YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           +        +     +++S+     P Y     R G  LY        +  +    T   
Sbjct: 217 VEQLQAGGMEIPLRHISASAAHEQFPQYRLDGVRIGRRLYMDHP-TQPTGRVSETATWRT 275

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            I  +R   AG  + YGG+  L RDS +A  A+GY DG    L          V + G  
Sbjct: 276 WITGLRTLQAGSPLGYGGKVFLERDSTVATIAVGYGDGLSEEL----------VRVHGPV 325

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD-----IKLDDVALASGTTNY 355
            + G    ++    MD T+ D+T      VGD + +FG D     +   +VAL  G    
Sbjct: 326 LVGGERARLM-ACCMDQTLVDVTGIP-CRVGDPVTLFGWDEQGNLLASQEVALLVG---- 379

Query: 356 D-----LLVRIGTRYAKFYT 370
           +     L  ++  R A+ Y+
Sbjct: 380 EDEGCGLTAQLSPRVARIYS 399


>gi|318081809|ref|ZP_07989118.1| alanine racemase [Streptomyces sp. SA3_actF]
          Length = 285

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 28/260 (10%)

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQLER 181
            L+ DTG  R G    +      N+   +   L ++  + SH ACAD+P     + QL  
Sbjct: 34  HLKADTGLGRNGCQPADWPALVGNALALQAEGLVRVVGLWSHFACADEPGHPSIAAQLTL 93

Query: 182 FRTL--ISHYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPM 232
           F  +  ++   G+      +A+S   L  P  H+ L RPGI++YG +       +    +
Sbjct: 94  FEEMTGLAARLGVRAEVRHIANSPATLSLPESHYDLVRPGIAMYGLSPSPTMGTHTDFGL 153

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V+   A + L+++   G  VSYG       D+ + +  +GY DG P   SG       
Sbjct: 154 RPVMRLVAPLALVKRVPGGHGVSYGHLYVTPGDTTLGLVPLGYGDGIPRHASGS------ 207

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVAL 348
                G   + G    + G+I MD  + D+        G    +FGP    +   +D A 
Sbjct: 208 -----GPVLVNGKWHTVAGRIAMDQFVVDLGGDTPA-PGSEAVLFGPGDRGEPSAEDWAR 261

Query: 349 ASGTTNYDLLVRIGTRYAKF 368
           A+ +  Y+++ RIG R  + 
Sbjct: 262 AADSIVYEIVTRIGARVPRV 281


>gi|213648187|ref|ZP_03378240.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
          Length = 295

 Score =  171 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 15/302 (4%)

Query: 69  VKLRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYAL 126
           + LR      A + +L G+ P          + P+++SV Q +T+ +   +     P  +
Sbjct: 1   MALRNILSADAMVVLLNGVMPQAMPFCCAQQITPLLNSVDQVMTWLALQEARSQRRPVLI 60

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q+D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +   
Sbjct: 61  QLDSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAK 120

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
             +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++
Sbjct: 121 KAFPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLTILRVQ 179

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
               G  + YG     TR   IA  + GYADG P  L                   +G  
Sbjct: 180 DVPVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL-----------RPPAGVCWRGVR 228

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           +P+LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ 
Sbjct: 229 LPVLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAACDTIPYEIMARLGARFR 287

Query: 367 KF 368
           + 
Sbjct: 288 RI 289


>gi|213419244|ref|ZP_03352310.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 234

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 4/233 (1%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                G + S+A+S GILL P  HF   RPGI LYG +   +K          
Sbjct: 182 CQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQP 233


>gi|270159739|ref|ZP_06188395.1| alanine racemase [Legionella longbeachae D-4968]
 gi|269988078|gb|EEZ94333.1| alanine racemase [Legionella longbeachae D-4968]
          Length = 861

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 142/406 (34%), Gaps = 54/406 (13%)

Query: 11  IDLTALKNNWHSM---NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           I+  A+K N  ++        +++   V+K N YGLG + ++     AG+    V  ++E
Sbjct: 458 INTKAIKENIKNIISFGKQCSHSKIIGVIKSNGYGLGSKLVSDLAIEAGIDFLAVAKLQE 517

Query: 68  GVKLRLYTP---------QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + LR             +A +      +   +  +   +     S      +       
Sbjct: 518 AIALRNSGIPSTVRLMTFEAPMIYDLSTYAANQIEVIIPSSKNAASINMIAKWLQNKHRV 577

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL-------------GQLSLIISHLA 165
                  + VDTG  R G       D    + +K                 L+       
Sbjct: 578 LGKLKVHIMVDTGLRRDGGYESNIPDSVMETISKLQLLDPNQVEFAGLSTHLACYRCTDY 637

Query: 166 CADDPSSHVNSVQLERFRTLIS----HYKGIEASLASSSGILLGPNYHFQ---------- 211
             D+  +   ++Q  RF  +I         I          LL   +  Q          
Sbjct: 638 NGDEIIN-FRALQFHRFEKVIKFLFSQGVQIPLIHIGGGLALLAEKWPLQFEKFLKEFNV 696

Query: 212 --LTRPGISLYGGTDKINKSH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD- 265
              TR G  LYG   + +       ++ VV  + ++  +     GE VSYGG  +  +D 
Sbjct: 697 GFYTRVGHGLYGMELEKDLHLDSPRLRQVVKMDLQVRNVFYVEEGEPVSYGGYWRAPKDG 756

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           + IA  A G+A+G P T              G    I  +  PI+GKI M+  M ++   
Sbjct: 757 AWIATLAGGWAEGVPRTAQ-----TLGEWQHGMMVCINNHQYPIVGKINMNAMMVNLGSL 811

Query: 326 LSIEVGDYIQIFGP---DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
             ++ GD   IFG    + KL+D+A  SG     ++V + T   + 
Sbjct: 812 TKVKPGDRAIIFGWSDHEPKLNDLAQLSGQIAPSIMVNVPTSMPRV 857


>gi|301167975|emb|CBW27561.1| alanine racemase [Bacteriovorax marinus SJ]
          Length = 375

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 77/382 (20%), Positives = 148/382 (38%), Gaps = 37/382 (9%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPA-LYNAGVQDFFVTSVEEGV 69
           I    L+NN+  +  +  + +   +VK NAYG G   I    +   G+ +F   S+ E +
Sbjct: 9   ISFEKLENNYKKLKEICVDNKIIFMVKANAYGHGVIPIVRHSVEKLGITEFGCASLGEAL 68

Query: 70  KLRLYTPQARIFVLYGIHPG----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
            LR         +           +   I+    I  + S      +        + P  
Sbjct: 69  LLREELYDLEFEIYVFSDVQVELRECAEIYLNRRIIPVISNRDDLDFILNSREFENFPLF 128

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQLERFR 183
           ++ +TG NRLGL + +  +   +        +  +++HL+ +      +  N +Q E F 
Sbjct: 129 IKFNTGMNRLGLEMDKVDEVIRSIRVSGRKSIYHLMTHLSSSSLPIKKNKRNIIQFENFE 188

Query: 184 TLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI----NKSHPMQT 234
            +   +          S+A+S  I  G        RPG+ +YG +  +    + S     
Sbjct: 189 KIKKAFSDAGIEVERTSIANSGAIEQGAGLGETHVRPGLMMYGPSSMLPQYSDLSLWSGE 248

Query: 235 VVTA-EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
           +++  E  +I I     G+ V YG     ++   +A+ A+GY DG+             +
Sbjct: 249 IISKLETYVISIFDVEKGQPVGYGATPCPSKGK-VAIVALGYGDGF------------TT 295

Query: 294 VFLGGKGFIKGYMVPILGKITMDM--TMFDITDSLSIEVGDYIQIFGPDIKLDDVAL--- 348
            ++G   + K     ++G++ MDM    FD      ++VGD   ++  D   +  A    
Sbjct: 296 RYIGTHLYHKDIKGKVVGRVNMDMAQVFFDENSLPDLKVGDSFTLW--DHSAERFAEFCK 353

Query: 349 ASGTTNYDLLVRIGTRYAKFYT 370
            +    Y++ + I  R  K Y+
Sbjct: 354 EAKIIPYEVFIGITQRVPKIYS 375


>gi|320094525|ref|ZP_08026295.1| alanine racemase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978541|gb|EFW10114.1| alanine racemase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 360

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/342 (21%), Positives = 121/342 (35%), Gaps = 30/342 (8%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID  A+  N   + A +  A+  AVVK NAYG G   +A     +G     V  + E V+
Sbjct: 18  IDHGAIARNLRVLRAAAPAAKQMAVVKANAYGHGLLPVALTALASGSDWLGVAQLPEAVE 77

Query: 71  LRL----YTPQ---ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
           LR            A +                  +   +S    L   S      G   
Sbjct: 78  LREGLDRAGVDRASAPVLAWITTPGSDFAGAVRAGIDLSVSWTWVLDAISAAARAVGRPA 137

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG---QLSLIISHLACADDPSS---HVNS 176
              +++DTG +R G +L +           +     ++    SHL+  DDPS       +
Sbjct: 138 RVHVKIDTGMSRAGSTLADLPALASALAAAQADGLVEVVGAWSHLSRGDDPSEGGLASTA 197

Query: 177 VQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---- 227
             +  F   +     +  +     LA+++GIL  P  H+ + R GI LYG +        
Sbjct: 198 SHVGIFERGLRVLGEAGVRPAIRHLAATAGILWHPETHYDMVRAGIGLYGLSPDPAVADS 257

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   ++  +T  A +  ++    G  VSYGG  +        +  +GY DG   + S   
Sbjct: 258 RELGLRPAMTLRAPLTSVKVIERGAPVSYGGTWRAPTRRWAGLVPLGYGDGILRSASNAA 317

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIE 329
                    GG            G++ MD  + D+  +    
Sbjct: 318 PV--VVRGPGGDV-----PARCAGRVCMDQFVIDLGPAGGAA 352


>gi|289165490|ref|YP_003455628.1| alanine racemase [Legionella longbeachae NSW150]
 gi|288858663|emb|CBJ12558.1| putative alanine racemase [Legionella longbeachae NSW150]
          Length = 861

 Score =  169 bits (429), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 83/406 (20%), Positives = 142/406 (34%), Gaps = 54/406 (13%)

Query: 11  IDLTALKNNWHSM---NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           I+  A+K N  ++        +++   V+K N YGLG + ++     AG+    V  ++E
Sbjct: 458 INTKAIKENIKNIISFGKQCSHSKIIGVIKSNGYGLGSKLVSDLAIEAGIDFLAVAKLQE 517

Query: 68  GVKLRLYTP---------QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            + LR             +A +      +   +  +   +     S      +       
Sbjct: 518 AIALRNSGIPSTVRLMTFEAPMIYDLSTYAANQIEVIIPSSKNAASINMIAKWLQNKHRV 577

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL-------------GQLSLIISHLA 165
                  + VDTG  R G       D    + +K                 L+       
Sbjct: 578 LGKLKVHIMVDTGLRRDGGYESNIPDSVMETISKLQLLDPNQVEFAGLSTHLACYRCTDY 637

Query: 166 CADDPSSHVNSVQLERFRTLIS----HYKGIEASLASSSGILLGPNYHFQ---------- 211
             D+  +   ++Q  RF  +I         I          LL   +  Q          
Sbjct: 638 NGDEIIN-FRALQFHRFEKVIKFLFSQGVQIPLIHIGGGLALLAEKWPLQFEKFLKEFNV 696

Query: 212 --LTRPGISLYGGTDKINKSH---PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD- 265
              TR G  LYG   + +       ++ VV  + ++  +     GE VSYGG  +  +D 
Sbjct: 697 GFYTRVGHGLYGMELEKDLHLDSPRLRQVVKMDLQVRNVFYVEEGEPVSYGGYCRAPKDG 756

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           + IA  A G+A+G P T              G    I  +  PI+GKI M+  M ++   
Sbjct: 757 AWIATLAGGWAEGVPRTAQ-----TLGEWQHGMMVCINNHQYPIVGKINMNAMMVNLGSL 811

Query: 326 LSIEVGDYIQIFGP---DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
             ++ GD   IFG    + KL+D+A  SG     ++V + T   + 
Sbjct: 812 TKVKPGDRAIIFGWSDHEPKLNDLAQLSGQIAPSIMVNVPTSMPRV 857


>gi|172056530|ref|YP_001812990.1| alanine racemase [Exiguobacterium sibiricum 255-15]
 gi|171989051|gb|ACB59973.1| alanine racemase [Exiguobacterium sibiricum 255-15]
          Length = 352

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 90/368 (24%), Positives = 160/368 (43%), Gaps = 30/368 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + ID  A+++N  S+ A S N +  AVVK+NAY LG  ++   L  AGV+ F V  V E 
Sbjct: 7   VTIDREAVRHNVASVFARS-NKQIFAVVKNNAYNLGMIEMVATLMEAGVRHFAVAEVYEA 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++++   P + +     ++P  +      + + +   +P L + ++  +        L++
Sbjct: 66  IEIKTNFPDSYVLA---MNPASDFKEVRLHGVALG--IPSLDWLTRHQADLSGIELHLKI 120

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL--- 185
           + G NR G+S  E       +  ++   L+ + +H   AD+P +     Q+ERF  +   
Sbjct: 121 NVGMNRFGVSSLEEALAVLETVREQELTLTGLYTHFPLADEPGADH-DGQVERFLEIGNP 179

Query: 186 -ISHYKGIEASLASSSGILLGPN--YHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             + +        +S+ I+            RPGI L+G +  I K   +   +     +
Sbjct: 180 LQAKHSFTYIHAENSATIVKHDPRLACCNYVRPGIFLFGYSP-IEKMDWLVPSLRMTTEV 238

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           + IR+  AGE V YG          +AV  +GY DG     S L               I
Sbjct: 239 VEIRQVEAGEHVGYGTSYTAPTAIRVAVLPVGYGDGVVRGRSSL------------PVII 286

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY-DLLVRI 361
            G   PI+ K+ M  T   +    ++E+GD + ++G  I++DD+   +GT N  + +   
Sbjct: 287 NGKRYPIISKLFMSHTFIAV--DSTVEIGDKVVLYGDGIEIDDI-TRTGTANNSEQMCAR 343

Query: 362 GTRYAKFY 369
             R    Y
Sbjct: 344 SWRLTHRY 351


>gi|186895776|ref|YP_001872888.1| alanine racemase [Yersinia pseudotuberculosis PB1/+]
 gi|186698802|gb|ACC89431.1| alanine racemase [Yersinia pseudotuberculosis PB1/+]
          Length = 409

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/359 (22%), Positives = 141/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 45  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 105 QELKTVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 164

Query: 125 ALQVDT-GFNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++ G +R GL + +A            K   +  I+SH    D      +  + ++
Sbjct: 165 HLALNSAGMSRNGLEVSKARGLNDAKTIAGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 224

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               +    G++       +A++   L  P+    + R G   YG       S   + V+
Sbjct: 225 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 282 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  M D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 331 AGHVIIQGQRLPVLGKTSMNTVMVDVTDLKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 389


>gi|170024003|ref|YP_001720508.1| alanine racemase [Yersinia pseudotuberculosis YPIII]
 gi|169750537|gb|ACA68055.1| alanine racemase [Yersinia pseudotuberculosis YPIII]
          Length = 409

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 137/359 (38%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 45  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 105 QELKTVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 164

Query: 125 ALQVDT-GFNRLGLSL------QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV 177
            L +++ G +R GL +       +A           +G +S      A            
Sbjct: 165 HLALNSAGMSRNGLEVSKARGLNDAKTIVGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 224

Query: 178 QLERFRTLIS-HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           Q +    +     + I+  +A++   L  P+    + R G   YG       S   + V+
Sbjct: 225 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 282 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  M D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 331 AGHVIIQGQRLPVLGKTSMNTVMVDVTDLKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 389


>gi|289828987|ref|ZP_06546687.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
          Length = 279

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 18/286 (6%)

Query: 85  GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALD 144
           G    Q+   +DT  +             +           ++V++G NRLG   + A  
Sbjct: 4   GFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLDIYVKVNSGMNRLGFQPERAQT 63

Query: 145 FTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILL 204
                   +      ++SH A AD P     +++     T          SL++S+  L 
Sbjct: 64  VWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALATEGLQCA---YSLSNSAATLW 120

Query: 205 GPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQK 260
            P  H+   RPGI LYG +            ++ V+T  + II ++   AGE V YGG  
Sbjct: 121 HPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLSSEIIGVQTLSAGERVGYGGGY 180

Query: 261 KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMF 320
            +T++  I + A GYADGYP                G    + G     +G ++MDM   
Sbjct: 181 SVTQEQRIGIVAAGYADGYPRHA-----------PTGTPVLVDGIRTRTVGTVSMDMLAV 229

Query: 321 DITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           D+T      +G  ++++G +IK+DDVA A+GT  Y LL  +  R  
Sbjct: 230 DLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYGLLCAVAPRVP 275


>gi|239943637|ref|ZP_04695574.1| putative alanine racemase [Streptomyces roseosporus NRRL 15998]
          Length = 284

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 30/258 (11%)

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G    +  +    + + +      I    SH ACAD+P     + QL  +R L
Sbjct: 26  DTGLGRGGCQPADWPELVGAARDAERAGHLRITGLWSHFACADEPGHPSIAAQLAVYRDL 85

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVV 236
           ++             LA+S   L  P  HF L R GI++YG +            ++ V+
Sbjct: 86  VAYAEKEGVDPEVRHLANSPATLTIPEAHFDLVRTGIAMYGISPAPELGTSAELGLRPVM 145

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A + L++ A AG  VSYG       ++ + +  +GYADG P   SG           
Sbjct: 146 TLAAAVALVKDAPAGHGVSYGHHYTTPAETTLGLIPVGYADGVPRHASGS---------- 195

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDI-TDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   + G +  + G++ MD  + D+  D      G    +FGP    +    D A A+ 
Sbjct: 196 -GPVLVGGKVRTVAGRVAMDQFVVDLEGDRPEA--GAEAVLFGPGDRGEPTAQDWAEAAD 252

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 253 TIAYEIVTRIGARVPRVY 270


>gi|291447101|ref|ZP_06586491.1| alanine racemase [Streptomyces roseosporus NRRL 15998]
 gi|291350048|gb|EFE76952.1| alanine racemase [Streptomyces roseosporus NRRL 15998]
          Length = 283

 Score =  166 bits (420), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 30/258 (11%)

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSVQLERFRTL 185
           DTG  R G    +  +    + + +      I    SH ACAD+P     + QL  +R L
Sbjct: 25  DTGLGRGGCQPADWPELVGAARDAERAGHLRITGLWSHFACADEPGHPSIAAQLAVYRDL 84

Query: 186 IS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVV 236
           ++             LA+S   L  P  HF L R GI++YG +            ++ V+
Sbjct: 85  VAYAEKEGVDPEVRHLANSPATLTIPEAHFDLVRTGIAMYGISPAPELGTSAELGLRPVM 144

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A + L++ A AG  VSYG       ++ + +  +GYADG P   SG           
Sbjct: 145 TLAAAVALVKDAPAGHGVSYGHHYTTPAETTLGLIPVGYADGVPRHASGS---------- 194

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDI-TDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   + G +  + G++ MD  + D+  D      G    +FGP    +    D A A+ 
Sbjct: 195 -GPVLVGGKVRTVAGRVAMDQFVVDLEGDRPEA--GAEAVLFGPGDRGEPTAQDWAEAAD 251

Query: 352 TTNYDLLVRIGTRYAKFY 369
           T  Y+++ RIG R  + Y
Sbjct: 252 TIAYEIVTRIGARVPRVY 269


>gi|20137378|sp|Q8ZFL4|ALR2_YERPE RecName: Full=Alanine racemase 2
          Length = 394

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 30  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 89

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 90  QELKTVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 149

Query: 125 ALQVDT-GFNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++ G +R GL + +A            K   +  I+SH    D      +  + ++
Sbjct: 150 HLALNSAGMSRNGLEVSKARGLNDAKTIAGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 209

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               +    G++       +A++   L  P+    + R G   YG       S   + V+
Sbjct: 210 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 266

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 267 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 315

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  + D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 316 AGHVIIQGQRLPVLGKTSMNTVIVDVTDLKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 374


>gi|22125742|ref|NP_669165.1| alanine racemase [Yersinia pestis KIM 10]
 gi|108812106|ref|YP_647873.1| alanine racemase [Yersinia pestis Nepal516]
 gi|145599043|ref|YP_001163119.1| alanine racemase [Yersinia pestis Pestoides F]
 gi|149366357|ref|ZP_01888391.1| putative alanine racemase [Yersinia pestis CA88-4125]
 gi|153950742|ref|YP_001400629.1| alanine racemase [Yersinia pseudotuberculosis IP 31758]
 gi|165925439|ref|ZP_02221271.1| alanine racemase [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165938444|ref|ZP_02227001.1| alanine racemase [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008560|ref|ZP_02229458.1| alanine racemase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166210808|ref|ZP_02236843.1| alanine racemase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167422631|ref|ZP_02314384.1| alanine racemase [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426368|ref|ZP_02318121.1| alanine racemase [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468736|ref|ZP_02333440.1| alanine racemase [Yersinia pestis FV-1]
 gi|218928815|ref|YP_002346690.1| alanine racemase [Yersinia pestis CO92]
 gi|229841680|ref|ZP_04461838.1| putative alanine racemase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843797|ref|ZP_04463940.1| putative alanine racemase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894540|ref|ZP_04509722.1| putative alanine racemase [Yersinia pestis Pestoides A]
 gi|229902427|ref|ZP_04517546.1| putative alanine racemase [Yersinia pestis Nepal516]
 gi|270490394|ref|ZP_06207468.1| alanine racemase [Yersinia pestis KIM D27]
 gi|294504124|ref|YP_003568186.1| alanine racemase [Yersinia pestis Z176003]
 gi|21958663|gb|AAM85416.1|AE013788_2 putative alanine racemase [Yersinia pestis KIM 10]
 gi|108775754|gb|ABG18273.1| alanine racemase [Yersinia pestis Nepal516]
 gi|115347426|emb|CAL20330.1| putative alanine racemase [Yersinia pestis CO92]
 gi|145210739|gb|ABP40146.1| alanine racemase [Yersinia pestis Pestoides F]
 gi|149290731|gb|EDM40806.1| putative alanine racemase [Yersinia pestis CA88-4125]
 gi|152962237|gb|ABS49698.1| alanine racemase [Yersinia pseudotuberculosis IP 31758]
 gi|165913559|gb|EDR32179.1| alanine racemase [Yersinia pestis biovar Orientalis str. IP275]
 gi|165922548|gb|EDR39699.1| alanine racemase [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992942|gb|EDR45243.1| alanine racemase [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166207988|gb|EDR52468.1| alanine racemase [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166958478|gb|EDR55499.1| alanine racemase [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167054723|gb|EDR64527.1| alanine racemase [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229680473|gb|EEO76570.1| putative alanine racemase [Yersinia pestis Nepal516]
 gi|229689405|gb|EEO81468.1| putative alanine racemase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229694143|gb|EEO84191.1| putative alanine racemase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229703559|gb|EEO90576.1| putative alanine racemase [Yersinia pestis Pestoides A]
 gi|262362240|gb|ACY58961.1| alanine racemase [Yersinia pestis D106004]
 gi|262366174|gb|ACY62731.1| alanine racemase [Yersinia pestis D182038]
 gi|270338898|gb|EFA49675.1| alanine racemase [Yersinia pestis KIM D27]
 gi|294354583|gb|ADE64924.1| alanine racemase [Yersinia pestis Z176003]
 gi|320014832|gb|ADV98403.1| putative alanine racemase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 409

 Score =  165 bits (419), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 45  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 105 QELKTVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 164

Query: 125 ALQVDT-GFNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++ G +R GL + +A            K   +  I+SH    D      +  + ++
Sbjct: 165 HLALNSAGMSRNGLEVSKARGLNDAKTIAGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 224

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               +    G++       +A++   L  P+    + R G   YG       S   + V+
Sbjct: 225 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 282 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  + D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 331 AGHVIIQGQRLPVLGKTSMNTVIVDVTDLKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 389


>gi|51596715|ref|YP_070906.1| alanine racemase [Yersinia pseudotuberculosis IP 32953]
 gi|51589997|emb|CAH21630.1| putative alanine racemase [Yersinia pseudotuberculosis IP 32953]
          Length = 409

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 45  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 105 QELKMVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 164

Query: 125 ALQVDT-GFNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++ G +R GL + +A            K   +  I+SH    D      +  + ++
Sbjct: 165 HLALNSAGMSRNGLEVSKARGLNDAKTIAGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 224

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               +    G++       +A++   L  P+    + R G   YG       S   + V+
Sbjct: 225 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 282 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  + D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 331 AGHVIIQGQRLPVLGKTSMNTVIVDVTDLKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 389


>gi|213423375|ref|ZP_03356363.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 299

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 3/275 (1%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P          + P+++SV Q +T+ +   +     P  +Q+
Sbjct: 76  LRNILSADAMVVLLNGVMPQAMPFCCAQQITPLLNSVDQVMTWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG++ ++          +       IISHLA AD P   +N  Q    +     
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANADRPDHALNVYQHTLLQQAKKA 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           +     SLA+S G+ L P +   L RPG++L+G   +   S P++   T    I+ ++  
Sbjct: 196 FPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFSTPLKPAFTLTLTILRVQDV 254

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
             G  + YG     TR   IA  + GYADG P  L
Sbjct: 255 PVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL 289


>gi|108807830|ref|YP_651746.1| alanine racemase [Yersinia pestis Antiqua]
 gi|167401740|ref|ZP_02307231.1| alanine racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|108779743|gb|ABG13801.1| putative alanine racemase [Yersinia pestis Antiqua]
 gi|167048845|gb|EDR60253.1| alanine racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
          Length = 409

 Score =  165 bits (417), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 79/359 (22%), Positives = 141/359 (39%), Gaps = 28/359 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             L+I   AL  N   M  L  N +   A++K +AYG     + P +    VQ   V S 
Sbjct: 45  AWLEISQGALDFNTKKMLTLLDNKSTLCAILKGDAYGHDLTLVTPVMLKNNVQCIGVASN 104

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHPY 124
           +E   +R      ++  +      + +     ++  +I         + +    G     
Sbjct: 105 QELKTVRDLGFTGQLIRVRSATLKEMQQAMAYDVEELIGDKTVAEQLNNIAKLNGKVLRI 164

Query: 125 ALQVDT-GFNRLGLSLQEALDF--THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
            L +++ G +R GL + +A            K   +  I+SH    D      +  + ++
Sbjct: 165 HLALNSAGMSRNGLEVSKARGLNDAKTIAGLKNLTIVGIMSHYPVEDASEIKADLARFQQ 224

Query: 182 FRTLISHYKGIEA-----SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
               +    G++       +A++   L  P+    + R G   YG       S   + V+
Sbjct: 225 QAKDVIAVTGLKREKIKLHVANTFATLAVPDSWLDMVRVGGVFYG---DTIASTEYKRVM 281

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T ++ I  +     G  V Y     L RDSL+A   +GYADGY    S            
Sbjct: 282 TFKSNIASLNNYPKGGTVGYDRTYTLKRDSLLANIPVGYADGYRRVFSN----------- 330

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
            G   I+G  +P+LGK +M+  + D+TD   + +GD + +FG     +I+ +++   SG
Sbjct: 331 AGHVIIQGQRLPVLGKTSMNTVIVDVTDMKKVSLGDEVVLFGKQGNAEIQAEEIEDLSG 389


>gi|223999109|ref|XP_002289227.1| alanine racemase [Thalassiosira pseudonana CCMP1335]
 gi|220974435|gb|EED92764.1| alanine racemase [Thalassiosira pseudonana CCMP1335]
          Length = 388

 Score =  163 bits (412), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 79/400 (19%), Positives = 146/400 (36%), Gaps = 54/400 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEKIAPALYN-AGVQDFFVTSVEE 67
           I L+++++N++ + + +   +   +V  K + YG G    A  L    G + F V ++EE
Sbjct: 1   IHLSSIRHNYNVVQSSAAQQQCQVIVVVKADGYGHGAVMTACHLVERCGAEAFAVATLEE 60

Query: 68  GVKLRLYTPQ--ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY----SKLMSCGVS 121
           GV LR    +      +       + + + +     ++    ++                
Sbjct: 61  GVALRRALEERFPPSSLAPRRKRAEVERVAERRKEELMGDQRKIHILLRSYHHSAESTWK 120

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKK---LGQLSLIISHLACADDPSSHVNSVQ 178
             +   VD+G  RLG    +     +   +     L      +       + +S     Q
Sbjct: 121 CWWHSLVDSGMGRLGFKTDQISADGNTPLSSPTPSLEMPFYGMCTHMADANSTSTYTHSQ 180

Query: 179 LERFRTLISHYKGI-----------EASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           ++RFR+L+   +              A+L ++S     PN      R G ++YG      
Sbjct: 181 MDRFRSLLHRVRSAGVAVPTISTDNSAALLTTSLTHFDPNAILGFVRCGGAIYGQRPAFK 240

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
           +   ++ V T  A +  +     GE V Y        D  IA   +G+ADGYP  L    
Sbjct: 241 E---LRAVSTLTATVKHVAVISEGESVGYDRAYVAPMDVRIATLTVGFADGYPRELGNGV 297

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS------IEVGDYIQIFGPD- 340
                     G+  I+G   P+ G + MDM M ++  +        + VGD   ++GP+ 
Sbjct: 298 ----------GRVSIRGSTFPVAGNVCMDMLMVELGPAEDEGAGAHVTVGDIAVLWGPEG 347

Query: 341 ----------IKLDDVALASGTTNYDLLVRIGT-RYAKFY 369
                     + L D+A    TT   L   +   R  + +
Sbjct: 348 MDVENCGNGLVTLADLAATLKTTQSALTCGLDKLRVQRQF 387


>gi|293395857|ref|ZP_06640139.1| alanine racemase [Serratia odorifera DSM 4582]
 gi|291421794|gb|EFE95041.1| alanine racemase [Serratia odorifera DSM 4582]
          Length = 257

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 110/268 (41%), Gaps = 19/268 (7%)

Query: 103 ISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIIS 162
           + S  QL   ++           L++++G NRLG +          +   +      ++S
Sbjct: 1   MHSDWQLAAIAE-AQLSAPLAVYLKINSGMNRLGFAPARLPQVWQQAQQIRNIAAITLMS 59

Query: 163 HLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
           H A AD P       Q        +    +   LA+S+  L  P  H    RPGI LYG 
Sbjct: 60  HFATADGPQGVT---QQMATIDAAAAALPLPRCLANSAATLWHPATHGSWVRPGIVLYGA 116

Query: 223 TDKINK----SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
           +            +Q  ++  + II ++    G+ V YG +   +    I + A GYADG
Sbjct: 117 SPSGQWRDIAETGLQPTMSLRSEIIALQTLQPGDRVGYGWRYAASAVQRIGIVACGYADG 176

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG 338
           YP                G   ++ G +   +G ++MDM   D+T      +G  ++++G
Sbjct: 177 YPRHA-----------PSGTPVWVDGVLTRTVGTVSMDMLAVDLTSCPQASIGTPVELWG 225

Query: 339 PDIKLDDVALASGTTNYDLLVRIGTRYA 366
             + +D+VA A+GT  Y+LL  +  R  
Sbjct: 226 RHLPVDEVAAAAGTLGYELLTALAQRVP 253


>gi|160894017|ref|ZP_02074796.1| hypothetical protein CLOL250_01572 [Clostridium sp. L2-50]
 gi|156864395|gb|EDO57826.1| hypothetical protein CLOL250_01572 [Clostridium sp. L2-50]
          Length = 381

 Score =  162 bits (410), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 82/352 (23%), Positives = 145/352 (41%), Gaps = 22/352 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +   L I   AL NN   +  L+  A+  AV+K NAYGLG  K A  L + G+ ++ VT 
Sbjct: 16  DMTTLTIKTNALDNNIRIIKRLANGAKVIAVLKGNAYGLGLTKFASFLQSKGIDNYGVTE 75

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           + + V LR       I ++  ++  ++      + I +  +           +  ++HP 
Sbjct: 76  LSDAVTLRRNGITGNILLMTPLYNSEDITTAIDHDITLSITSTDCAHVIDETAAYMNHPT 135

Query: 125 ---ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L +DTGF R G    +     +   + +  +++ I SH   A   + +    Q + 
Sbjct: 136 VHAHLCIDTGFGRYGFLCSDEKQIANTIQSLRHIKITGIFSHFHAAACRNEYYVKKQFQD 195

Query: 182 FRTLIS--HYKGIE---ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
           F  L       G+      ++SS+ ++  P+ +    R G +  G     N  +  + V 
Sbjct: 196 FTHLCDALRKDGVPVGIRHISSSTSMIKYPSMNLDAIRIGSAFLGRLAVPN-DYGFREVC 254

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL-----TLSGLDSEHS 291
              A +  I +  AG  + YG   KL+ ++  AV + GY  G  +     + +   S   
Sbjct: 255 NLSAYVDDIYELPAGHNIGYGHSFKLSHNAKTAVISAGYYHGLGMERHTDSRTNFFSPIR 314

Query: 292 PSVFLGG-------KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
               L G           K Y +P+LG+I+M+  + D T   +I VGD +  
Sbjct: 315 IYYKLKGTFHKKTPAASFKDYRLPVLGQISMNSVIVDTTGC-NISVGDTVTF 365


>gi|288960918|ref|YP_003451257.1| alanine racemase [Azospirillum sp. B510]
 gi|288913226|dbj|BAI74713.1| alanine racemase [Azospirillum sp. B510]
          Length = 389

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 79/360 (21%), Positives = 125/360 (34%), Gaps = 29/360 (8%)

Query: 26  LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           L+   R   VVK NAYG G   ++ AL  AG+  F V S +EG  LR     A I V+  
Sbjct: 33  LAPTTRILGVVKANAYGHGAVAVSRALERAGIDGFAVDSPDEGTALRDAGIAAPILVMNP 92

Query: 86  IHPGQEKIIFDTNLIPVISSVPQLTFYSKLM---------SCGVSHPYALQVDTGFNRLG 136
           + PG    +    L   +S                        V          G    G
Sbjct: 93  LCPGDAPALVAAGLTAAVSDGEAAQALDDAARRAGGVAGLHVRVRADADGMGGDGLGTGG 152

Query: 137 LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASL 196
             +   L   H   N ++  L   +      D                 +         +
Sbjct: 153 DGVAPLLRALHRFANLRVEGLFTHMIGPYRDDPVQIGREIAGFRGLLGRLPADVPRPPLI 212

Query: 197 ASSSGILLG--PNYHFQLTRPGISLYG--GTDKINKSHPMQTVVTAEARIILIRKALAGE 252
            +++   L   P   F + R G  LYG    +      P + V+   +RI  + +   G+
Sbjct: 213 HAATSPGLFNAPGARFDMVRLGAVLYGIRMVEAGGAPFPFRPVMELVSRIAHLGRLEPGD 272

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            + YG   +       A+  +GYAD  P  L+  D              I+G   P++G+
Sbjct: 273 DIGYGPAARRRTGGRAAMIPMGYAD-LPFLLNFRD----------TAVLIRGRRAPLIGE 321

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKF 368
             M   + D+TD    E+GD +   G      I ++D+  A+G     +L  +G R A+ 
Sbjct: 322 AFMGKVLADVTDIPEAELGDEVVFVGAQGMESITVEDIGKANGIRPSAIL-MLGPRVARR 380


>gi|330813901|ref|YP_004358140.1| alanine racemase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486996|gb|AEA81401.1| alanine racemase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 198

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 14/210 (6%)

Query: 161 ISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLY 220
           +SHLACAD+ +++ N++Q  RF  +   +   + SLA+S GI LG  YH+ + RPGISLY
Sbjct: 1   MSHLACADEKNNNYNNIQKARFEKIKKEFSNCKYSLAASGGIFLGKQYHYDMVRPGISLY 60

Query: 221 GGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP 280
           GG    +K   ++  V+ +  +  I +   GE + Y       +++  A   IGYADG  
Sbjct: 61  GGKRTFHK--GIKHAVSLKVPVTQINQIKKGESIGYSRTFYTKKNTTTATIPIGYADGLN 118

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIFGP 339
           + LS             G    KG  +PI+G+++MD+ + D+T   + ++VGD I I+  
Sbjct: 119 IRLSN-----------KGFFLFKGKKIPIIGRVSMDLIILDVTKFKNKVKVGDMIDIYNS 167

Query: 340 DIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D  +DD A  +GT  Y ++  +  RY K Y
Sbjct: 168 DYTIDDFAKQTGTIPYRIITCMSQRYDKKY 197


>gi|222080194|ref|YP_002540057.1| alanine racemase [Agrobacterium vitis S4]
 gi|221738839|gb|ACM39618.1| alanine racemase [Agrobacterium vitis S4]
          Length = 294

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 102/272 (37%), Positives = 142/272 (52%), Gaps = 3/272 (1%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL  N+  +  ++    TAAVVK +AYGLG E++A  LY  G + FFV    E 
Sbjct: 24  LTIDLGALSRNYELLAGMAAPGNTAAVVKADAYGLGAERVARTLYAKGCRHFFVAQFIEA 83

Query: 69  VKLR-LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
            +LR   +  ARIFVL G+ PG E +    N++PVI+S+ Q    ++     G   P  +
Sbjct: 84  TRLRPALSYDARIFVLNGLQPGNEDVCAYENIVPVINSMDQWRNRNRTARRLGRRLPIVV 143

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGL  +E               +  ++SHLA ADD  S  N  QLE  R + 
Sbjct: 144 QFDTGMSRLGLPPEERPLLAEAVAQGSDVDILFLMSHLASADDEKSAQNGEQLEELRKIA 203

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           + + G + S A+S GI LG +Y   L RPGI+LYGG     ++ PM+ VV  +  ++  R
Sbjct: 204 AEFPGYDLSFANSGGIFLGDDYRGLLARPGIALYGGAPSAARN-PMEAVVRLDVAVVQTR 262

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
                  V YGG    TR++ +A  A G  D 
Sbjct: 263 TVPGSTKVGYGGAHVTTRETRLATIAAGECDV 294


>gi|255017730|ref|ZP_05289856.1| hypothetical protein LmonF_08290 [Listeria monocytogenes FSL
           F2-515]
          Length = 255

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 108/260 (41%), Gaps = 25/260 (9%)

Query: 121 SHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +    L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL
Sbjct: 8   TLRIHLKVDSGMGRLGIRTAEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQL 67

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
            +F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++
Sbjct: 68  AKFQTILTSLKKRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELK 127

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +     ++ +++   G+ VSYG     T    +A   IGYADG     SG        
Sbjct: 128 PALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF------- 180

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALA 349
                   + G   PI+G++ MD T+  +      + G  + I G D    +  DD A  
Sbjct: 181 -----HVLVDGEPAPIIGRVCMDQTIIKLPREF--QTGSKVTIIGKDHGNTVTADDAAQY 233

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
             T NY++   +  R  + Y
Sbjct: 234 LDTINYEVTCLLNERIPRKY 253


>gi|218671884|ref|ZP_03521553.1| alanine racemase protein [Rhizobium etli GR56]
          Length = 160

 Score =  155 bits (393), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 73/156 (46%), Positives = 103/156 (66%), Gaps = 2/156 (1%)

Query: 216 GISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY 275
           GI+LYGG      ++PM+ V TAEARII +R   AGE VSYG   +L RDS +A+ + GY
Sbjct: 1   GIALYGGEAVCGMANPMRPVATAEARIIQVRTVGAGETVSYGRALQLPRDSRLAIVSAGY 60

Query: 276 ADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDY 333
           ADGY  + S        +V  GG+GFI G+ VP+ G+ITMD+T+FD+TD     +  GDY
Sbjct: 61  ADGYMRSQSSGGVPLRQAVPQGGQGFIAGHKVPVAGRITMDLTIFDVTDLPENAVRAGDY 120

Query: 334 IQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++FG ++ LDDVA A+GT  Y++L  +G R+ + Y
Sbjct: 121 VELFGKNMPLDDVARAAGTIGYEILTSMGLRHERRY 156


>gi|322819666|gb|EFZ26693.1| alanine racemase 2, putative [Trypanosoma cruzi]
          Length = 388

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 85/395 (21%), Positives = 151/395 (38%), Gaps = 48/395 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
           +++ L  +  N   +  ++G A    +VK NAYG G  K++  L+NA GV  F V S+ E
Sbjct: 7   VEVCLRNIAYNVECIRRIAGKAELIPMVKGNAYGHGMGKVSEYLHNACGVHTFGVASLGE 66

Query: 68  GVKLRLYTP----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++L    P    +A+  +              +   P      +LT     +    +  
Sbjct: 67  ALELIESQPSIAEKAQNEIFVFSDTEVLNEGCQSYYQPCGRWAVRLTPILGTLPQLKAFC 126

Query: 124 YA---------LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
            +         L+++TG NRLGL   E  +       +    L L    +A + +  +  
Sbjct: 127 ASNAFNNSKLCLKLETGMNRLGLRFDELEEAVPILKQRGGVDLLLQHFGIAGSVERLAE- 185

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGP-----NYHFQLTRPGISLYGGTDKINKS 229
                E F+            + ++S    G             RPGI LYG     +K+
Sbjct: 186 TLNHYEAFKNAKKFLHDSGVEVRATSVSNSGAVEQRIGLEETYIRPGIMLYGPRSVTSKN 245

Query: 230 HPMQTVVTAE-ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +    +++       GE V Y     +  DS+I +  IGYADG+  T  G+  
Sbjct: 246 LWNGKFASCFYTKVLHHFPLRKGEGVGYDLT-PVKADSVIVMLPIGYADGFLCTYKGMPI 304

Query: 289 EHSPSVFLGGKGFIKGYMVPIL----GKITMDMTMF---------DITDSL-SIEVGDYI 334
           + +P               PI+    G+I MDM            +I + + +++    I
Sbjct: 305 KVTPEDAAE----------PIIGTVHGRINMDMAAVVVYPEEVGKNIGNIMTAVKKESRI 354

Query: 335 QIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++G DI  ++ A++ GT  + L   +  R  + Y
Sbjct: 355 RVWGDDI--EEKAVSVGTIPHQLTCGLSIRVPRIY 387


>gi|229917987|ref|YP_002886633.1| alanine racemase [Exiguobacterium sp. AT1b]
 gi|229469416|gb|ACQ71188.1| alanine racemase [Exiguobacterium sp. AT1b]
          Length = 362

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 86/369 (23%), Positives = 142/369 (38%), Gaps = 37/369 (10%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           + IDL A++ N   + AL       AVVK+NAY LG E +   LY+ GV+ F VT++EE 
Sbjct: 3   VTIDLNAIRENKRRIEAL--GRPVFAVVKNNAYNLGMEPVVTTLYDEGVRHFMVTTLEEA 60

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           +++R +   AR+ ++  ++  +       +      ++    +              L++
Sbjct: 61  LEVRTHAESARVLIMNPVYTWE-----HVHAHDFDVAIGSYEWLVSQREHLDGVRLHLKL 115

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRTL-- 185
           D G NR G    E           +   L  + +H   AD D +   +SVQ+ERF     
Sbjct: 116 DVGMNRFGAKTFEEALRIVAFCQNEGLNLVGLCTHFPLADADNAEVEHSVQVERFADWST 175

Query: 186 -ISHYKGIEASLASSSGILLGPNY---HFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
            +      E   A++S   L  +    H    R GI LYG +  +     +      E  
Sbjct: 176 RLMERHTFELIHAANSAATLQDDSRLHHCTHVRVGIFLYGYS-SVEPVEWLVPAFYWETE 234

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           ++ +    AG  V YG          IAV  +GY DG                       
Sbjct: 235 VVAVHDIEAGAHVGYGTGYTAESKERIAVLPVGYGDGLMRA------------RRHLPVH 282

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY----DL 357
           I+G   P +  I M  +   +     +++GD + ++G + K+DDV        Y    + 
Sbjct: 283 IEGRAYPFVSNIFMSHSFIKV--DEDVQIGDRVALYGIETKIDDVTR----VGYANNSEQ 336

Query: 358 LVRIGTRYA 366
           L     R  
Sbjct: 337 LCARSWRVP 345


>gi|58039646|ref|YP_191610.1| alanine racemase [Gluconobacter oxydans 621H]
 gi|58002060|gb|AAW60954.1| Alanine racemase [Gluconobacter oxydans 621H]
          Length = 257

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 88/227 (38%), Positives = 126/227 (55%), Gaps = 2/227 (0%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL +DL A+ +N+  +  L+  A  AAVVK +AYGLG E++AP L NAG  DFFV  V+
Sbjct: 17  ARLTVDLDAIASNYRYLQTLASGASCAAVVKADAYGLGIERVAPVLENAGATDFFVAHVD 76

Query: 67  EGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY- 124
           EG++LR   + +ARI VL+G  PG         L PV++S+ Q+  +    S   + P  
Sbjct: 77  EGIRLRSVVSEKARITVLHGPRPGASADCVRYGLRPVLNSLEQIALWRDEGSRTDALPEA 136

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           ALQVD+G +R GLS  +      +       ++ L++SHLACAD P    N  Q +R   
Sbjct: 137 ALQVDSGMSRFGLSDADLETLQADKGLVDGLKVGLVMSHLACADTPDHPANQAQKDRLLQ 196

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
           + +       SL++SSGI LG +YH  + RPG +LYG        +P
Sbjct: 197 MSARLPPAPLSLSASSGIFLGTDYHLDVVRPGAALYGIAPNRTGPNP 243


>gi|302558949|ref|ZP_07311291.1| alanine racemase [Streptomyces griseoflavus Tu4000]
 gi|302476567|gb|EFL39660.1| alanine racemase [Streptomyces griseoflavus Tu4000]
          Length = 193

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 20/183 (10%)

Query: 194 ASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKAL 249
             +A+S   L  P  HF L RPGI++YG +            ++  +T  A + L++   
Sbjct: 15  RHIANSPATLTLPESHFDLVRPGIAMYGISPSPEIGTSADFGLRPAMTLSASLALVKHVP 74

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
            G  VSYG        + + +  +GYADG P   S             G   ++G    +
Sbjct: 75  GGHGVSYGHHYVTPGATTLGLVPLGYADGIPRHAS-----------SAGPVLVEGKWRTV 123

Query: 310 LGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDLLVRIGTRY 365
            G++ MD  + D+      E G    +FGP    +   +D A A+GT  Y+++ RIG R 
Sbjct: 124 AGRVAMDQFVVDLGGDEP-EPGAEAVLFGPGDRGEPTAEDWAQAAGTIAYEIVTRIGARV 182

Query: 366 AKF 368
            + 
Sbjct: 183 PRV 185


>gi|308454191|ref|XP_003089746.1| hypothetical protein CRE_10733 [Caenorhabditis remanei]
 gi|308269018|gb|EFP12971.1| hypothetical protein CRE_10733 [Caenorhabditis remanei]
          Length = 769

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 80/382 (20%), Positives = 139/382 (36%), Gaps = 39/382 (10%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R++ID +AL++N   + A  G+A     AV+K +AYG G E + P +  AGV    + S
Sbjct: 402 ARVEIDRSALESNLRYLLAEMGSASPEVCAVLKSDAYGHGIEHVLPVVLAAGVTAVGIVS 461

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
             E   +R      RI  +      + +      +   +  +      + +     VS P
Sbjct: 462 NPEARLVRELGFGGRILRVRAATSAEARGALPMAVEEWLGGLAHARALAAIAEAVDVSIP 521

Query: 124 YALQVDT---GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
             L +++       L L    A          +   +  I +H    D          L 
Sbjct: 522 VHLALNSTGLSKESLDLGASGADAELAGIVASRRLDVRGIAAHFPREDAHD---VREGLS 578

Query: 181 RFRTLISHY---------KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            FR                G++   A+S   L  P     L R G +LYG  D    +  
Sbjct: 579 AFRADADRVLEALGPDRAAGVQRHCATSFAALEVPESRLDLVRIGAALYG--DSSAAAPW 636

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
            +  +   + +  + +  AG  V Y    +L  ++ IA   +GY DG P +L G      
Sbjct: 637 QRRAMRIVSEVSTVCRYPAGRTVGYERHHRLDAETRIATVPLGYGDGVPRSLGGR----- 691

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLD------D 345
                 G   + G  VPI+  + M+    D+T+   +  GD + ++G   + +      +
Sbjct: 692 ------GWALVGGRSVPIVDHLAMNTLAIDVTEIPEVGPGDEVVLYGRQGEAELDGGALE 745

Query: 346 VALASGTTNYDLLVRIGTRYAK 367
           +A  SG         +G    +
Sbjct: 746 LA--SGQIAAAAYTGMGRILPR 765


>gi|213617521|ref|ZP_03372347.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 186

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 16/192 (8%)

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVT 237
           F        G + S+A+S GILL P  HF   RPGI LYG +             Q V++
Sbjct: 5   FNAFCQGKPG-QRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMS 63

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             + +I +R   AGE V YGG     RD+ + V A+GY DGYP                G
Sbjct: 64  LTSSLIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSG 112

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               + G  VPI+G++ MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L
Sbjct: 113 TPVLVNGREVPIVGRVAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYEL 172

Query: 358 LVRIGTRYAKFY 369
           + R+ +R A  Y
Sbjct: 173 ITRLTSRVAMKY 184


>gi|289805711|ref|ZP_06536340.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. AG3]
          Length = 245

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 114/258 (44%), Gaps = 18/258 (6%)

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-S 149
              I    L   + +  QL     +          +++DTG +RLG+  +EA  F    +
Sbjct: 1   MPTISAQCLHTAVHNQEQLAALEAVELAE-PVTVWMKLDTGMHRLGVRPEEAEAFYQRLT 59

Query: 150 FNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYH 209
             K + Q   I+SH A AD+P       QL+ F        G + S+A+S GILL P  H
Sbjct: 60  HCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAFCQGKPG-QRSIAASGGILLWPQSH 118

Query: 210 FQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRD 265
           F   RPGI LYG +             Q V++  + +I +R   AGE V YGG     RD
Sbjct: 119 FDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSSLIAVRDHKAGEPVGYGGTWVSERD 178

Query: 266 SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS 325
           + + V A+GY DGYP                G    + G  VPI+G++ MDM   D+  +
Sbjct: 179 TRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGREVPIVGRVAMDMICVDLGPN 227

Query: 326 LSIEVGDYIQIFGPDIKL 343
                GD + ++G  + +
Sbjct: 228 AQDNAGDPVVLWGEGLPV 245


>gi|257464238|ref|ZP_05628617.1| alanine racemase [Fusobacterium sp. D12]
 gi|317061757|ref|ZP_07926242.1| alanine racemase [Fusobacterium sp. D12]
 gi|313687433|gb|EFS24268.1| alanine racemase [Fusobacterium sp. D12]
          Length = 360

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 126/375 (33%), Gaps = 30/375 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N F  L+++  A+ +N   +           V+K NAYG G  ++A     AG+   
Sbjct: 1   MIKNSFY-LEVNRDAILHNIEVLRKW-KKKDIIPVIKANAYGHGAVEMAKTCLQAGITQV 58

Query: 61  FVTSVEEGVKL------RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK 114
            V   EE   +      +  +      +L     G + +I     I +  +  +      
Sbjct: 59  AVARYEEARHILEDSYFQRLSETVPFQILVFETMGDDSVIKAFPRIDMAINSLEDLK-EA 117

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           L          +++D  F R G+  ++          K +    +     A + +     
Sbjct: 118 LEHGISPKRMHVKIDLSFGRNGIEEKDFKYLIREIQEKNIFLKGIFSHLFASSYEDGLLC 177

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
             +      + I         L +S+             R G+  YG  +       +Q 
Sbjct: 178 IEL-FSTLLSQIGREHFERIHLQNSASAYNYDCDIVTDIRVGMLNYGLQEPGYFHEDLQQ 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKL--TRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
             + + R+  IR     + ++Y  +++L       IA   IGYADG+       +     
Sbjct: 237 AFSLKGRVDSIRAGKDMKYLAYERKEELGVEEAKWIAKIKIGYADGFGKQNENTN----- 291

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    I      I+ +ITMD +  ++     ++VGD + +F        V   +G 
Sbjct: 292 -------CLIHRKEYRIV-EITMDNSFLEV--DERVKVGDEVILF---YNAAKVKQETGK 338

Query: 353 TNYDLLVRIGTRYAK 367
             Y+ L  +  R  +
Sbjct: 339 QVYEHLTGLTERLPR 353


>gi|297521078|ref|ZP_06939464.1| alanine racemase [Escherichia coli OP50]
          Length = 163

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)

Query: 202 ILLGPNYHFQLTRPGISLYGGTD----KINKSHPMQTVVTAEARIILIRKALAGELVSYG 257
           +LL P  HF   RPGI LYG +             Q V++  + +I +R+  AGE V YG
Sbjct: 1   MLLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYG 60

Query: 258 GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDM 317
           G     RD+ + V A+GY DGYP                G    + G  VPI+G++ MDM
Sbjct: 61  GTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGREVPIVGRVAMDM 109

Query: 318 TMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
              D+      + GD + ++G  + ++ +A  +  + Y+L+ R+ +R A  Y
Sbjct: 110 ICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKY 161


>gi|297519923|ref|ZP_06938309.1| alanine racemase [Escherichia coli OP50]
          Length = 202

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       + +L G    ++                +     +  S        +
Sbjct: 62  EALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  ++A  F H  +  K + Q   I+SH A AD+P       QL  F T 
Sbjct: 122 KLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTF 181

Query: 186 ISHYKGIEASLASSSGILLGPN 207
                G + S+A+S GILL P 
Sbjct: 182 CEGKPG-QRSIAASGGILLWPQ 202


>gi|88800370|ref|ZP_01115936.1| alanine racemase [Reinekea sp. MED297]
 gi|88776947|gb|EAR08156.1| alanine racemase [Reinekea sp. MED297]
          Length = 369

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 75/352 (21%), Positives = 128/352 (36%), Gaps = 26/352 (7%)

Query: 29  NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHP 88
           +A   AV+K +AYG G  ++A  +    ++   +TS  E   +R    +  I  L    P
Sbjct: 32  HAEFCAVLKADAYGHGIAEVAAIVCEHRIKTVGITSNAEARLVREAGFEGTILRLRTATP 91

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN 148
            +        +   +SS+        L               G +R GL L E       
Sbjct: 92  SEIAGAVADRVQEQVSSLYTAEVIDSLTEHSEGVHL-AINAGGMSRDGLELNERDGHDTC 150

Query: 149 SF--NKKLGQLSLIISHLACADDPSSHVNSVQL-----ERFRTLISHYKGIEASLASSSG 201
               +    ++  I +H     +    ++           F       + +     SS  
Sbjct: 151 QRIVDLLGDRIVGICTHHPSGSEQDLQLSDQHFRSDLNWIFSNTALKREQVNVHAGSSLS 210

Query: 202 ILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKK 261
           ++          R G  LYG    +      +  +  +A+I  I     G  + Y     
Sbjct: 211 LISSTPIETDFYRCGAILYGI---LKPELGFEHTMQLKAQITNITTYPQGSTIGYDRTTT 267

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
           LTRDS +A  A+GYA+G+     G                I+G +VP+LGK++M+  + D
Sbjct: 268 LTRDSRVANIALGYANGFRRNYFGRS-----------HVLIRGQLVPVLGKVSMNTIVAD 316

Query: 322 ITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +TD   +EV D + IFG      I +  + + + T   D+    G R  + Y
Sbjct: 317 VTDIPVVEVEDEVVIFGHQGTGKIDIKRIEMQADTIMADIYAEWGQRNPRVY 368


>gi|213621090|ref|ZP_03373873.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 200

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 13/207 (6%)

Query: 162 SHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG 221
           SHLA AD P   +N  Q    +     +     SLA+S G+ L P +   L RPG++L+G
Sbjct: 1   SHLANADRPDHALNVYQHTLLQQAKKAFPTSRYSLANSCGMFLHPAWREDLCRPGVALFG 60

Query: 222 GTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
              +   S P++   T    I+ ++    G  + YG     TR   IA  + GYADG P 
Sbjct: 61  VA-QPWFSTPLKPAFTLTLTILRVQDVPVGTPIGYGSTVTTTRPLRIATVSAGYADGIPR 119

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI 341
            L                   +G  +P+LG++ MD  M D +  +    GD ++  G   
Sbjct: 120 NL-----------RPPAGVCWRGVRLPVLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQ 167

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKF 368
            L++VA A  T  Y+++ R+G R+ + 
Sbjct: 168 TLEEVAAACDTIPYEIMARLGARFRRI 194


>gi|154174920|ref|YP_001408670.1| alanine racemase [Campylobacter curvus 525.92]
 gi|226711031|sp|A7GZM8|ALR_CAMC5 RecName: Full=Alanine racemase
 gi|112802113|gb|EAT99457.1| alanine racemase [Campylobacter curvus 525.92]
          Length = 337

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 139/374 (37%), Gaps = 48/374 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              ++++  A  +N   ++  +G   R   V+KDNAYG G + IA A    G++   V S
Sbjct: 1   MSEIRLNKKAYIHNLMQISNKAGGKERVMLVLKDNAYGHGAKLIAAAASEFGIKFCAVKS 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E ++++    +    +L  I  G E   F          +  +     L         
Sbjct: 61  QSEALEIQRNFEKI--LILSHIANGDEDQNF----------IYAINDMKGLNRIKRGTRI 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DT  +R GL   E          ++   L    +H   +D+ ++    VQ + F+ 
Sbjct: 109 HLVIDTNMHRNGLKFSELE-AAFGPIKERGLALEGAYTHFRASDEMNADYF-VQRQNFKE 166

Query: 185 LISH---------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
             +                   +S+ +     +   + R GI+ +G   + + S  ++ V
Sbjct: 167 AKAEILRLCEKFAMPHPIFHSHNSAALERFGEFDDDMVRVGIAQHG-YAQFDDSLNLKPV 225

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A+ +  R   AG+ V YG +    +D  IA   +GY DG        +        
Sbjct: 226 LSLWAQKVSERVLKAGQCVGYGAKFCADKDINIATYDLGYGDGLLRYAGDGELP------ 279

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
                   G    +LGK++MD              G+++ +F      +  A    T NY
Sbjct: 280 -----LANGKA--MLGKMSMDSF-----SCEDA--GEWVCVFDD---ANVWARYFDTINY 322

Query: 356 DLLVRIGTRYAKFY 369
           D+LV++     + +
Sbjct: 323 DILVKLSPNIKRKF 336


>gi|289811326|ref|ZP_06541955.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. AG3]
          Length = 174

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 15/177 (8%)

Query: 194 ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAEARIILIRKAL 249
            SL++S+  L  P  H+   RPGI LYG +            ++ V+T  + II ++   
Sbjct: 5   YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLSSEIIGVQTLS 64

Query: 250 AGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPI 309
           AGE V YGG   +T++  I + A GYADGYP                G    + G     
Sbjct: 65  AGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTPVLVDGIRTRT 113

Query: 310 LGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y LL  +  R  
Sbjct: 114 VGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYGLLCAVAPRVP 170


>gi|71425229|ref|XP_813053.1| alanine racemase [Trypanosoma cruzi strain CL Brener]
 gi|70877902|gb|EAN91202.1| alanine racemase, putative [Trypanosoma cruzi]
          Length = 388

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 83/395 (21%), Positives = 149/395 (37%), Gaps = 48/395 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEE 67
           +++ L  +  N   +  ++G A    +VK NAYG G  +++  L+NA GV  F V S+ E
Sbjct: 7   VEVFLRNIAYNVECIRRIAGKAELIPMVKGNAYGHGMGRVSEYLHNACGVHKFGVASLGE 66

Query: 68  GVKLRLYTP----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++L    P    +A+  +              +   P      +LT     +    +  
Sbjct: 67  ALELIESQPSIAEKAQNEIFVFSDTEVLNEGCQSYYQPCGRWAVRLTPILGTLPQLKAFC 126

Query: 124 YA---------LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
            +         L+++TG NRLGL   E  +       +    L L    +A + +  +  
Sbjct: 127 ASNAFNNSKLCLKLETGMNRLGLRFDELEEAVPILKQRGGVDLLLQHFGIAGSVERLAE- 185

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGP-----NYHFQLTRPGISLYGGTDKINKS 229
                E F+            + ++S    G             RPGI LYG     +K+
Sbjct: 186 TLNHYEAFKKAKKFLHDSGVEVRATSVSNSGAVEQRIGLEETYIRPGIMLYGPRSVTSKN 245

Query: 230 HPMQTVVTAE-ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +    +++       GE V Y     +  DS+I +  IGYADG+  T  G+  
Sbjct: 246 LWNGKFASCFYTKVLHHFPLRKGEGVGYDLT-PVKADSVIVMLPIGYADGFLCTYKGMPI 304

Query: 289 EHSPSVFLGGKGFIKGYMVPIL----GKITMDMTMF---------DITDSL-SIEVGDYI 334
             +P               PI+    G+I MDM            +I + + +++    I
Sbjct: 305 NVTPEDAAE----------PIIGTVHGRINMDMAAVVVYPEEVGKNIGNIMAAVKKESRI 354

Query: 335 QIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           +++G DI  ++ A++ G   + L   +  R  + Y
Sbjct: 355 RVWGDDI--EEKAVSVGAIPHQLTCGLSIRVPRIY 387


>gi|309789197|ref|ZP_07683790.1| alanine racemase [Shigella dysenteriae 1617]
 gi|308922951|gb|EFP68465.1| alanine racemase [Shigella dysenteriae 1617]
          Length = 200

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 15/187 (8%)

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   R GI LYG +         +  ++ V+T  
Sbjct: 21  EQAAEGLECRRSLSNSAATLWHPEAHFDWVRLGIILYGASPSGQWRDIANTGLRPVMTLS 80

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           + II ++   AGE V YGG+     +  I + A GYADGY                 G  
Sbjct: 81  SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYSRHA-----------PTGTP 129

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+ 
Sbjct: 130 VLVDGVRTMTVGTVSMDMMAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMC 189

Query: 360 RIGTRYA 366
            +  R  
Sbjct: 190 ALALRVP 196


>gi|255024672|ref|ZP_05296658.1| alanine racemase [Listeria monocytogenes FSL J1-208]
          Length = 204

 Score =  149 bits (375), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 24/216 (11%)

Query: 164 LACADDPSSHVNSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYG 221
            A AD   +     QL +F+T+++  K     +   +S+  LL P   F   R GIS+YG
Sbjct: 1   FATADQLETSYFEQQLAKFQTILTSLKNRPTYVHVANSAASLLQPQIGFDAIRFGISMYG 60

Query: 222 GTDKIN----KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD 277
            T            ++  +     ++ +++   G+ VSYG     T    +A   IGYAD
Sbjct: 61  LTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYAD 120

Query: 278 GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
           G     SG                + G   PI+G++ MD T+  +      + G  + I 
Sbjct: 121 GLIRHYSGF------------HVLVDGEFAPIIGRVCMDQTIIKLPREF--QTGSKVTII 166

Query: 338 GPD----IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G D    I  DD A    T NY++   +  R  + Y
Sbjct: 167 GEDHGNVITADDAAHYLDTINYEVTCLLNERIPRKY 202


>gi|297517360|ref|ZP_06935746.1| alanine racemase [Escherichia coli OP50]
          Length = 255

 Score =  149 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 11/258 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L+V++G NRLG      L                ++SH A A+ P     ++      
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISGAMARI--- 176

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
              +       SL++S+  L  P  HF   RPGI LYG +         +  ++ V+T  
Sbjct: 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236

Query: 240 ARIILIRKALAGELVSYG 257
           + II ++   AGE V YG
Sbjct: 237 SEIIGVQTLKAGERVGYG 254


>gi|213615581|ref|ZP_03371407.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 187

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 3/186 (1%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +     F V  +E
Sbjct: 4   ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPD--ADAFGVARLE 61

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E ++LR       I +L G     +        +       +     + +         +
Sbjct: 62  EALRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWM 121

Query: 127 QVDTGFNRLGLSLQEALDFTHN-SFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++DTG +RLG+  +EA  F    +  K + Q   I+SH A AD+P       QL+ F   
Sbjct: 122 KLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGATEHQLDIFNAF 181

Query: 186 ISHYKG 191
                G
Sbjct: 182 CQGKPG 187


>gi|296272673|ref|YP_003655304.1| alanine racemase [Arcobacter nitrofigilis DSM 7299]
 gi|296096847|gb|ADG92797.1| alanine racemase [Arcobacter nitrofigilis DSM 7299]
          Length = 340

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 76/374 (20%), Positives = 141/374 (37%), Gaps = 49/374 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ I+     +N   ++  +G+    AVV KDNAYG G  +I+      G++   V +
Sbjct: 1   MSKIIINKRNYIHNLDIISKQAGSKEKIAVVLKDNAYGHGIIEISKIAKEFGIKKAVVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E +K+  +     I      H          N I  I  +P             +   
Sbjct: 61  LKEALKIEDFFEDIIILSEINFHTYSHTFHIVINSIEQIHKIP------------KNTNV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG +R G+S  +  +       + L  L+ I++H   AD  +S     Q   FR 
Sbjct: 109 HLKVDTGMHRNGISKNQLKEAIDGICRQNL-NLTGIMTHHRGADGLNSEFF-WQKRNFRL 166

Query: 185 LISHYKGIEASL---------ASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQ 233
           +    K I   L          +S+ +    N+     R GI+ YG  +         ++
Sbjct: 167 VKEEVKRICEQLFLPLPKFHSCNSAALFRTANFDDDFARVGIASYGYFENHPSFDKIDLK 226

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++  A+ +  R     + V YGG  K  ++ +++   IGY DG+         +    
Sbjct: 227 PVLSLWAQKVTTRVLKKNQSVGYGGTYKTDKNIIVSTYDIGYGDGFLRINENQSYKTPKG 286

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
                          +LG+I+MD    D  D       + + +F        +A    T 
Sbjct: 287 -------------YKVLGRISMDNLSLDSQD-------EEVCMFDD---ARALAKIHNTI 323

Query: 354 NYDLLVRIGTRYAK 367
           +Y+++  + +   +
Sbjct: 324 SYEIVTTLSSELKR 337


>gi|324999413|ref|ZP_08120525.1| alanine racemase [Pseudonocardia sp. P1]
          Length = 253

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 23/253 (9%)

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKL---GQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           DTG +R G    E      +          ++  + SHLA AD+P       Q  R R  
Sbjct: 2   DTGLSRNGCPPDEWPGLVDDVAAAAAEGTCEVDAVWSHLARADEPGDPSIDAQAARLRAA 61

Query: 186 ISHY----KGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEA 240
            SH           LA+S+ ++  P+ H  L RPGI+ YG          P++  +T   
Sbjct: 62  ASHVRDRGFAPLVHLANSAALMTRPDLHLDLVRPGIAAYGLDPIAQPADSPLRPAMTVRG 121

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           R+ L++   AGE VSYG +        +A+  +GYADG P  ++                
Sbjct: 122 RVALVKTVAAGEGVSYGHEWTAPGPRTLALVPLGYADGVPRRMNDGRRMR---------V 172

Query: 301 FIKGYMVPILGKITMDMTMFDIT--DSLSIEVGDYIQIFGPD----IKLDDVALASGTTN 354
            I   + P+ G++ MD  + D      L + VGD +++FG          + A   GT +
Sbjct: 173 RIGDTVRPVAGRVCMDQFVVDCGAPGELGVVVGDRVELFGTGDGGGPTAREWADELGTIH 232

Query: 355 YDLLVRIGTRYAK 367
           Y+++  I  R  +
Sbjct: 233 YEIVTGIKGRVRR 245


>gi|71423858|ref|XP_812596.1| alanine racemase 2 [Trypanosoma cruzi strain CL Brener]
 gi|70877396|gb|EAN90745.1| alanine racemase 2, putative [Trypanosoma cruzi]
          Length = 388

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 81/395 (20%), Positives = 143/395 (36%), Gaps = 48/395 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSVEE 67
           +++ L  +  N   +  ++G A    +VK NAYG G  K++  L+N  GV  F V S+ E
Sbjct: 7   VEVCLRNIAYNVECIRRIAGKAELIPMVKGNAYGHGMGKVSEYLHNVCGVHTFGVASLGE 66

Query: 68  GVKLRLYTPQA-------------RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK 114
            ++L    P                  +  G     +        +  I           
Sbjct: 67  ALELIESQPSIAEKAQNEIFVFSDTEVLNEGCQSYYQPCGRWAVRLTPILGTLPQLKAFC 126

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
             +   +    L+++TG NRLGL   E  +       +    L L    +A + +  +  
Sbjct: 127 ASNAFNNTKLCLKLETGMNRLGLRFDELEEAVPILKQRGGVDLLLQHFGIAGSVERLAE- 185

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGP-----NYHFQLTRPGISLYGGTDKINKS 229
                E F+            + ++S    G             RPGI LYG     +K+
Sbjct: 186 TLNHYEAFKNAKKFLHDSGVEVRATSVSNSGAVEQRIGLEETYIRPGIMLYGPRSVTSKN 245

Query: 230 HPMQTVVTAE-ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
                  +    +++       GE V Y     +  DS+I +  IGYADG+  T  G+  
Sbjct: 246 LWNGKFASCFYTKVLHHFPLRKGEGVGYDLT-PVKADSVIVMLPIGYADGFLCTYKGMPI 304

Query: 289 EHSPSVFLGGKGFIKGYMVPIL----GKITMDMTMF---------DITDSL-SIEVGDYI 334
           + +P               PI+    G+I MDM            +I + + +++    I
Sbjct: 305 KVTPEDAAE----------PIIGTVHGRINMDMAAVVVYPEEVGKNIGNIMAAVKKESRI 354

Query: 335 QIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            ++G DI  ++ A++ G   + L   +  R  + Y
Sbjct: 355 HVWGDDI--EEKAVSVGAIPHQLTCGLSIRVPRIY 387


>gi|303242258|ref|ZP_07328745.1| Alanine racemase [Acetivibrio cellulolyticus CD2]
 gi|302590168|gb|EFL59929.1| Alanine racemase [Acetivibrio cellulolyticus CD2]
          Length = 132

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 16/129 (12%)

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           +       +SYG   K  R+S IA   IGYADGY   L+             G+  + G 
Sbjct: 1   KDVETDTCISYGRIFKTQRESRIATLPIGYADGYTRLLTN-----------KGRVLVNGQ 49

Query: 306 MVPILGKITMDMTMFDITDS-LSIEVGDYIQIF----GPDIKLDDVALASGTTNYDLLVR 360
            VPI+GKI MD  M D+TD    + VGD + +F    G +I ++D+A   GT NY++   
Sbjct: 50  SVPIVGKICMDQCMIDVTDVQGEVNVGDEVVLFGSQNGSEISIEDLASKIGTINYEIACI 109

Query: 361 IGTRYAKFY 369
           IG R  + Y
Sbjct: 110 IGKRIPRVY 118


>gi|50254060|gb|AAT72154.1| alanine racemase [Borrelia hermsii]
          Length = 326

 Score =  147 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 81/341 (23%), Positives = 137/341 (40%), Gaps = 25/341 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  ++   + I L  L +N  S      +    A +K +AYG G  +    L   GV  F
Sbjct: 1   MTKHK--EIIITLQNLNHNLTSNKNPYSSRELVATLKSDAYGHGLIQTFKFLKEKGVNYF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCG 119
            +  +++ +KL+       I +         K +   N+ P ++    L+   +      
Sbjct: 59  GLFWIDDALKLKKIDKNVNILLYINTDKNAIKNLVKFNITPFVADSQYLSLIEQECRKQN 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L+VD G NR G+ +++AL+      N K  +   I +HL   ++  + +   Q+
Sbjct: 119 KKIKAHLKVDVGMNRYGIKIEDALNLAIQIQNSKSIEFEGICTHLPTTEN--TKITQTQI 176

Query: 180 ERFRTLIS--HYKGIEASLASSSGILLGPNY----HFQLTRPGISLYGGTDKINKSHPM- 232
           E+F   I+    K I      +S      NY     F + RPG+ LYG     N S+   
Sbjct: 177 EKFVYFINKLKSKNINPKFIHASNSEHIANYKISEKFNMVRPGLILYGYHPNPNISNNNL 236

Query: 233 --QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
             + V+   ++II ++    GE +SY G      D  I +  +GY DG P   S      
Sbjct: 237 QLKPVLNLYSKIIFLKNIKKGEQISYSGLFTAKEDMQIGLIPVGYFDGIPQNTSN----- 291

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG 331
                      I+     I GKI M++++ +I   L I +G
Sbjct: 292 ------NFYCIIRDRKCFIKGKICMNISIIEIPKDLKINIG 326


>gi|253583923|ref|ZP_04861121.1| alanine racemase [Fusobacterium varium ATCC 27725]
 gi|251834495|gb|EES63058.1| alanine racemase [Fusobacterium varium ATCC 27725]
          Length = 351

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 75/371 (20%), Positives = 139/371 (37%), Gaps = 24/371 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  +++ I+   L +N   +  L G      VVK NAYG G E I  ALY+ G ++ 
Sbjct: 1   MVINS-IKMIINQKNLLSNIDYLKKLKGK-NILPVVKANAYGHGVELIIKALYDGGQREV 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V    E   +      + + +L     G  ++I +   + +  +         + +   
Sbjct: 59  AVARYVEAENILKMNLGSDLKILVFESIGDIELIKNNPNLEIAINDF-NELKDLIKAGIP 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
           S+   L++D GF R G+SL E  +    +    L    +     A   +    +  +   
Sbjct: 118 SNRMQLKIDLGFGRNGISLSEIPELEKFTNENNLKFKGVFSHLFAVNYEDGLELIDL-FS 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                I   K     L +S+ ++          R G+  YG  +       ++ V + E 
Sbjct: 177 DVVNSIGKDKFEMIHLQNSAAVMNYNCDIATHIRVGMLTYGLQEVGYFDPNLKQVFSLEG 236

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSL--IAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           ++  +R     + V+Y  +  L  ++   +A   IGY DG+                   
Sbjct: 237 QVAGVRDIEDHKYVAYELKDDLDIENCKYLAKIKIGYGDGFL------------KRNEKS 284

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
           K  I      I  ++TMD T  ++    S++ GD + ++     +  V   +G   Y+LL
Sbjct: 285 KCIINNKEFKIA-QVTMDNTFIEV--DASVKEGDRVLLYND---ITKVVNFTGMNIYELL 338

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 339 TILSPRIPRVY 349


>gi|313619768|gb|EFR91373.1| alanine racemase [Listeria innocua FSL S4-378]
          Length = 199

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 83/207 (40%), Gaps = 24/207 (11%)

Query: 173 HVNSVQLERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
                QL +F+ ++S        +   +S+  LL P   F   R GIS+YG T      +
Sbjct: 5   SYFEQQLAKFQAILSSLTTRPTFVHTANSAASLLQPQIDFDAIRFGISMYGLTPSTEIKN 64

Query: 231 PMQTVVTA----EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
            +   +         ++ +++   G+ VSYG     T    +A   IGYADG     SG 
Sbjct: 65  SLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEKEWVATLPIGYADGLIRHYSGF 124

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IK 342
                          ++G   PI+G+I MD T+  +      + G  + I G D    + 
Sbjct: 125 ------------HVLVEGERAPIIGRICMDQTIIKLPREF--QTGTKVTIIGSDHGNKVT 170

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFY 369
            DD A   GT NY++   +  R  + Y
Sbjct: 171 ADDAAEYLGTINYEVTCLLTERIPRKY 197


>gi|309806961|ref|ZP_07700943.1| alanine racemase [Lactobacillus iners LactinV 03V1-b]
 gi|308166581|gb|EFO68778.1| alanine racemase [Lactobacillus iners LactinV 03V1-b]
          Length = 265

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 28/266 (10%)

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF-NKKLGQLSLIISHLACADDPSSHVNS 176
            G      L +D+G  R+G +  +A    ++   +     +  + +H + AD        
Sbjct: 10  SGTKLKIHLAIDSGMGRIGFNEDDAFLKANDYLLSHPEYDVEGMFTHFSTADCHDLEYFD 69

Query: 177 VQLERFRTLIS--HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK-------IN 227
            Q+++F         K       +S+  +        L R GI++YG           I 
Sbjct: 70  SQVKKFDHFKKMLRIKPKYIHCDNSAASIFNRQVDSDLVRYGIAMYGLNPSSAPHGIEIQ 129

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
               +Q  +   + ++ +++  A   V YG   K   D  I    +GYADG+  ++ G  
Sbjct: 130 PKFTLQPALCFVSELVFVKQIHANNAVGYGATFKADTDEWIGTVPVGYADGWQRSMQGF- 188

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKL 343
                      K  +     PI+G++ MD  M  + + + +  G  +++   D      +
Sbjct: 189 -----------KVKVGDVYCPIVGRVCMDQFMVLLPEKMPV--GTPVELISADAKAPNNI 235

Query: 344 DDVALASGTTNYDLLVRIGTRYAKFY 369
             VA  + T +Y++   +  R  + Y
Sbjct: 236 KAVADYANTIHYEIACLLSDRVPREY 261


>gi|283954466|ref|ZP_06371986.1| alanine racemase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794083|gb|EFC32832.1| alanine racemase [Campylobacter jejuni subsp. jejuni 414]
          Length = 328

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 80/367 (21%), Positives = 141/367 (38%), Gaps = 51/367 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A ++N   +    GN  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEHNLRYIARKIGNFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++          L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSKFIYALNDISQIKDYKQGAKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+  ++         +  L +L+ + +H A AD+ +     VQ E F+    
Sbjct: 112 IDTGMHRNGVCTEDLEYAIGLIQSSNL-KLTGMFTHFASADEMNGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +L G     +  R G+  +G          ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALLRGNIPEDEYCRIGLVQFGYG-----DLNLKKVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI- 302
             R    G+ + YGG    T+D  +A   +GYADG                + G K  I 
Sbjct: 225 SQRVLRKGQSIGYGGIFTATKDLEVATYDLGYADGLFR-------------YSGKKELIL 271

Query: 303 -KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
             G +  +LGK++MD    +         G+ I +F      D  A    T +Y++LV++
Sbjct: 272 GNGKI--MLGKMSMDSFSCE-------NSGEEICVFND---ADVWADFFHTISYEILVKL 319

Query: 362 GTRYAKF 368
                + 
Sbjct: 320 NPNIQRV 326


>gi|152993699|ref|YP_001359420.1| alanine racemase [Sulfurovum sp. NBC37-1]
 gi|226711065|sp|A6QC54|ALR_SULNB RecName: Full=Alanine racemase
 gi|151425560|dbj|BAF73063.1| alanine racemase [Sulfurovum sp. NBC37-1]
          Length = 336

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 78/369 (21%), Positives = 146/369 (39%), Gaps = 45/369 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              + I+     +N + +   +G+  + A V+KDNAYG G + +A      G++   V S
Sbjct: 1   MATIIINKENFYHNLNQIALKTGSVEKIAIVLKDNAYGHGLQLMASLSAEFGIRHAVVRS 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +EE   ++      R  ++ G H  ++ I               L   + + +  +    
Sbjct: 61  MEEAKNIKELF---RTVLVLGDHAVKDDICS-----------FALNCLNDIENAELGARV 106

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE---- 180
            L+VDTG +R G++ +E          K L +L  +++H   AD+  S +   Q +    
Sbjct: 107 ELKVDTGMHRNGIAPEELERALQMIQKKDL-ELVGVMTHFRSADEMGSELFWQQKQFASV 165

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQTVVTA 238
           + R   + +  +     +S+  L    +   L R GI  YG      +    P++ V++ 
Sbjct: 166 KERVKEAGFMNVRFHSHNSAATLRSKTFDEDLVRVGIGAYGYNELPDVFDDIPLKPVLSL 225

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A+ I  R+   GE V YGG      +  ++   +GY DG+    S              
Sbjct: 226 SAKKIATRRLKKGERVGYGGDFTAPEEMTVSTYDLGYGDGWCRGDS-------------A 272

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
             +I    +PILG+++MD  +       S +    + I     K    A   GT +Y++ 
Sbjct: 273 HPYITAEGLPILGRVSMDFIIL-----ESAKE--ELVIMNDAQKA---ARQFGTISYEMT 322

Query: 359 VRIGTRYAK 367
             +     +
Sbjct: 323 TALSINIER 331


>gi|118496926|ref|YP_897976.1| alanine racemase [Francisella tularensis subsp. novicida U112]
 gi|194324153|ref|ZP_03057927.1| alanine racemase, C- domain family [Francisella tularensis subsp.
           novicida FTE]
 gi|118422832|gb|ABK89222.1| alanine racemase [Francisella novicida U112]
 gi|194321600|gb|EDX19084.1| alanine racemase, C- domain family [Francisella tularensis subsp.
           novicida FTE]
          Length = 351

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 77/363 (21%), Positives = 143/363 (39%), Gaps = 23/363 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+   +K+N   +   + +++   +VK NAYG+G E I     N  V  + +  +EE 
Sbjct: 7   VEINSKLVKSNIEYLRNKNPHSKIMFIVKANAYGVGIENIYKV-TNNLVDAYGIARIEEY 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             L+       I  L GI+          N+IP++ +   +  Y K      S    L  
Sbjct: 66  YVLKSLGCTKDIIFLSGIYAECFDFKIPKNVIPILGNELLIKDYIKYED-DKSKQVMLDF 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D G  R G    + +   +   N     ++L        +        +        ++ 
Sbjct: 125 DCGMGRFGFYKDDFIKHLYKLKNAGFSNITLFSHIPTGYNGFDKSKKYIDKIL---SLAT 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
              ++ + ++S   L   ++  +  RP  ++ G   +  +   ++  +  +A II IR  
Sbjct: 182 QTKLKYTFSNSPVSLFSYDFQQEYIRPCSAILGYDQEPQE---IKFSLALKACIISIRDI 238

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G+ +SY  +    RD+ +A+  IGYADG               +       IK    P
Sbjct: 239 PKGQYISYANEYFCDRDTTVAILNIGYADGL-----------GCKIHKDSYLIIKDTKCP 287

Query: 309 ILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RY 365
           IL  I MD    DI+     +++ D I++FGP+ + L+  A     T  + L ++   R 
Sbjct: 288 IL-AINMDYLYIDISAIKHQLKILDMIELFGPNSLSLEQHASMYNITKDEALTKLNALRV 346

Query: 366 AKF 368
            K 
Sbjct: 347 KKI 349


>gi|118474927|ref|YP_892713.1| alanine racemase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414153|gb|ABK82573.1| alanine racemase [Campylobacter fetus subsp. fetus 82-40]
          Length = 337

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 76/373 (20%), Positives = 137/373 (36%), Gaps = 48/373 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ +  TA  +N   +++  G+  R  AV+KD+AYG G   +A      G++   V S
Sbjct: 1   MSKIVLSKTAYIHNLTQISSKIGSKDRIIAVLKDDAYGHGAVLMAGIASGFGIKWACVKS 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           ++E +++  +     I          ++             +  +   S L         
Sbjct: 61  IDEAIEISPFFKNIIILSHIPNGKENDEF------------IYAINDLSGLDVIKSGISV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DT  +R G+ + E      N    +  ++    +H   +D+ S     VQ   F  
Sbjct: 109 HLAIDTMMHRNGIGIDEIET-AFNIAKNRSIRICGAYTHFRSSDEISGDY-YVQKANFLK 166

Query: 185 ---------LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
                      +          +S+ I     +  +  R GI  +G + + ++S  ++ V
Sbjct: 167 AKIKLKSLFKKNGVDKPMFHSHNSAAIERTNGFDDEFVRAGIVQFGYS-QFDESLNLKKV 225

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A  I  R   AG+ V YGG     +D  IA   +GY DG        D        
Sbjct: 226 LSLWADRISKRVLKAGQSVGYGGAFTAKKDINIATYDLGYGDGLLRYNGKGDLH------ 279

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
                   G    ILGK++MD            + GD I +F         A    T +Y
Sbjct: 280 -----LANGEK--ILGKMSMDSF-------SCADSGDQICVFDD---ARVWAKFFDTISY 322

Query: 356 DLLVRIGTRYAKF 368
           D+LV++ ++  + 
Sbjct: 323 DILVKLSSKIKRV 335


>gi|57504964|ref|ZP_00370916.1| alanine racemase, putative [Campylobacter coli RM2228]
 gi|305432037|ref|ZP_07401204.1| alanine racemase [Campylobacter coli JV20]
 gi|57019236|gb|EAL55942.1| alanine racemase, putative [Campylobacter coli RM2228]
 gi|304445121|gb|EFM37767.1| alanine racemase [Campylobacter coli JV20]
          Length = 329

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 141/367 (38%), Gaps = 50/367 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KI+  A ++N   +    G+ +R   V KDNAYG G + +AP     GV    V + +E
Sbjct: 4   IKINQKAYESNLKIIAEKIGSFSRLICVFKDNAYGHGAKILAPIASTLGVNFVAVKNEKE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
             +L  +     I   +       K I+  N I  I++    T               L+
Sbjct: 64  AYELEDFFDNILILSHHPHGKENSKFIYALNDIDKINAYQNDTRI------------HLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DTG +R G+ +++  +         L +L  I +H A AD+  +    +Q E+F     
Sbjct: 112 IDTGMHRNGVCVEDLNEALLKIKCSAL-KLEGIFTHFAGADEMDASFF-IQREKFSKAKD 169

Query: 188 HYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             K I       S  S +          +L R G++ +G  D+  K      V++  A  
Sbjct: 170 IAKQIYKNLIFHSHNSPALFRAVKIPEDELCRTGLAQFGYGDESLKK-----VLSLYAHR 224

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  R+   G+ V YGG    T    IA   +GYADG                   G   +
Sbjct: 225 LSHRELQIGQSVGYGGAFSATEKIKIATYDLGYADGLFR------------YDGKGDLLL 272

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIE-VGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
                 ILGKI+MD          S +  G  I +F      D  A    T NY++LV++
Sbjct: 273 ANKQ-KILGKISMDSF--------SCQDFGKEICVFDN---ADVWADFFNTINYEILVKL 320

Query: 362 GTRYAKF 368
                + 
Sbjct: 321 HPDIPRV 327


>gi|222824133|ref|YP_002575707.1| alanine racemase [Campylobacter lari RM2100]
 gi|222539355|gb|ACM64456.1| alanine racemase [Campylobacter lari RM2100]
          Length = 335

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 78/374 (20%), Positives = 129/374 (34%), Gaps = 52/374 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              +KID  A + N   + + +G   +   V KDNAYG G + +AP     GV    V +
Sbjct: 1   MAYIKIDRLAYEYNLDLIASKAGGYEKVICVFKDNAYGHGAKLLAPIARAKGVNFVAVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E  +L        I   +      EK             +  L   + +     +   
Sbjct: 61  EVEAKELENIFDNILILSHHPHGNESEKF------------IYALNDKNDIKKLKKNTKI 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L +DT  +R G+ L+E  +      +  L     ++ H A +D+  +    VQ + F+ 
Sbjct: 109 HLVIDTNMHRNGILLEEIQEVLQGLKSNNLILH-GVMMHFAGSDEVDASYF-VQKQNFQH 166

Query: 185 LISHYKGI-------EASLASSSGILLGPNYHFQ--LTRPGISLYGGTDKINKSHPMQTV 235
                  +           + +S  L   N        R G+  +G       S  ++ V
Sbjct: 167 AKKIIYNLLQKEAKSLVFHSHNSEALFRANTLEDDEYCRVGLVQFGYAYF---SKDLRKV 223

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++  A  +  R    G+ V YGG      D  IA   +GYADG        D        
Sbjct: 224 LSLWAEKLSQRVLKKGQSVGYGGMYSAKEDIEIATYDLGYADGLLRYDGKKDFF------ 277

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQ-IFGPDIKLDDVALASGTTN 354
                   G    ILGK++MD          S E    +  +       + +A    T N
Sbjct: 278 -----LPNGKK--ILGKMSMDSF--------SCENDSEVICVLND---ANVMASFFNTIN 319

Query: 355 YDLLVRIGTRYAKF 368
           Y++LV++     + 
Sbjct: 320 YEILVKLSPNLKRI 333


>gi|208780376|ref|ZP_03247717.1| alanine racemase, C- domain family [Francisella novicida FTG]
 gi|208743744|gb|EDZ90047.1| alanine racemase, C- domain family [Francisella novicida FTG]
          Length = 351

 Score =  144 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 77/362 (21%), Positives = 142/362 (39%), Gaps = 23/362 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+   +K+N   +   + +++   +VK NAYG+G E I     N  V  + +  +EE 
Sbjct: 7   VEINSKLVKSNIEYLRNKNPHSKIMFIVKANAYGVGIENIYKV-TNNLVDAYGIARIEEY 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             L+       I  L GI+          N+IP++ +   +  Y K      S    L  
Sbjct: 66  YVLKSLGCTKDIIFLSGIYAECFDFKIPKNVIPILGNELLIKDYIKYED-DKSKQVMLDF 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D G  R G    + +   +   N     + L        +        +        ++ 
Sbjct: 125 DCGMGRFGFYKDDFIKHLYKLKNAGFSNIILFSHIPTGYNGFDKSKKYIDKIL---SLAT 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
              ++ + ++S   L   ++  +  RP  ++ G   +  +   ++  +  +A II IR  
Sbjct: 182 QTKLKYTFSNSPVSLFSYDFQQEYIRPCSAILGYDQEPQE---IKFSLALKACIISIRDI 238

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             G+ +SY  +    RD+ +A+  IGYADG               +       IK    P
Sbjct: 239 PKGQYISYANEYFCDRDTTVAILNIGYADGL-----------GCKIHKDSYLIIKDTKCP 287

Query: 309 ILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RY 365
           IL  I MD    DI+     +++ D I++FGP+ + L+  A     T  + L ++   R 
Sbjct: 288 IL-AINMDYLYIDISAIKHQLKILDMIELFGPNSLSLEQHASMYNITKDEALTKLNALRV 346

Query: 366 AK 367
            K
Sbjct: 347 KK 348


>gi|241667310|ref|ZP_04754888.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 351

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 76/363 (20%), Positives = 143/363 (39%), Gaps = 23/363 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+   +K+N   +   + +++   +VK NAYG+G E I     +  V  + +  ++E 
Sbjct: 7   VEINSKLVKSNIEYLRNKNPHSKIMFIVKANAYGIGIENIYKVTNDL-VDAYGIARIDEY 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             L+       I  L GI+          N+IP++S+V  +  Y K      S    L  
Sbjct: 66  YVLKNLGCTKDIVFLSGIYAECFDFKIPKNVIPILSNVLLIKDYIKYED-DKSKQVMLDF 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D G  R G    + +             + L        +        +       L++ 
Sbjct: 125 DCGMGRFGFYRDDFIKHLDMLKISGFSNIILFSHIPTGYNGYDRSKKYIDKIL---LLAE 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
              ++ + ++S   L   ++  +  R   ++ G   +  +   ++  ++ +A II IR  
Sbjct: 182 ETKLKYTFSNSPVSLFDTDFLQEYIRSSSAVLGYDQEPKE---IKFSLSLKACIISIRDI 238

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             GE +SYG +    +D+ +A+  IGYADG               +       I     P
Sbjct: 239 PKGEYISYGNEYFCNKDTTVAILNIGYADGL-----------GCEIHHDSYLLINATKCP 287

Query: 309 ILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RY 365
           IL  I MD    DI+     +++ D I++FGP+ + L+  A     T  + L ++   R 
Sbjct: 288 IL-SINMDYLYVDISAIKHQLKMLDMIELFGPNSLSLEQHANMYNITKDEALTKLNALRV 346

Query: 366 AKF 368
            K 
Sbjct: 347 RKI 349


>gi|154267917|gb|ABS72053.1| VanTG-like protein [Ruminococcus gauvreauii]
          Length = 570

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 11/227 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             +   +++DL  LK+N  ++  A+    R  AVVK NAYG G  + A  L   GV  F 
Sbjct: 342 RADRAWIEVDLNNLKHNARTLSKAMPPGCRLMAVVKANAYGHGAFETAVCLEQIGVTSFA 401

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V +++EG+ LR +  +  I +L    P + K +    LI  +   P     +     G  
Sbjct: 402 VATIDEGIALRRWGIRGDILILGFTDPSRAKELHRYRLIQTLIDAPYAKRLA---RQGYI 458

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD--DPSSHVNSVQL 179
               +++DTG +RLG  + E  +      ++ L    +     A     +        Q 
Sbjct: 459 IRSHIKIDTGMHRLGFGVNERSEILRTVRSRNLNVCGIYTHLCAADSLLEDDVKFTRRQT 518

Query: 180 ERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLYG 221
           E F  L+   K  E       + SS G+L  P       R GISLYG
Sbjct: 519 EVFFELLEWLKEQEVTIPDIHIQSSYGLLNYPELGCSYVRAGISLYG 565


>gi|241667406|ref|ZP_04754984.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254875955|ref|ZP_05248665.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254841976|gb|EET20390.1| predicted protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 427

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 70/376 (18%), Positives = 138/376 (36%), Gaps = 45/376 (11%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPA-LYNAGVQDFFVTSVE 66
           ++ID++A K+N   + ++ G+  +  AV+K +AYG G + +  A + ++ V        +
Sbjct: 42  VEIDVSAYKHNLKVVKSIIGDDVKLCAVMKSDAYGHGLDNLIDATVSSSAVDCIAAVDNK 101

Query: 67  E-GV-------------KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
           E  +              LR+        +    +    + I  +     I S       
Sbjct: 102 EFAIISPKIQQSGRDITALRIAPVTKSELIQAINNGWDIEEIIGSYEQAKIISDTAQQM- 160

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
           S+++   V    ++ ++T   R+     E +       N K+  +    +    ++  + 
Sbjct: 161 SEILGKKVIIKVSINIETAMGRMAFRKVEDIKKAMKLPNIKVVGVMTHFAKDYESESVAE 220

Query: 173 HVNSVQLERFRTLISH---YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGT-----D 224
                QL +F  ++S     +G    +A+S      P     + R G  +YG       D
Sbjct: 221 PATKQQLAKFDEIVSQLDLPEGTIQHVANSGAAAKYPWARRDMVRAGSLIYGEDLDDLQD 280

Query: 225 KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLT--RDSLIAVAAIGYADGYPLT 282
             ++  P+     +E  I + R       ++Y  ++     R S  A    GY  G+P  
Sbjct: 281 PKHELRPVMKSFRSEVAI-IERDIPPHSPINYDAEQYTRSDRKSTTATLRTGYNYGFP-- 337

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS---IEVGDYIQIFGP 339
                     +     +  I G   P++GK +M+M + DITD      ++VGD   + G 
Sbjct: 338 --------QRAYKSKMQVIIDGVKYPVIGKTSMNMLVVDITDEPKDKRVKVGDQALLVGK 389

Query: 340 ----DIKLDDVALASG 351
                I     A  + 
Sbjct: 390 YGDNYISWQQFAQQNN 405


>gi|283956250|ref|ZP_06373730.1| alanine racemase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791970|gb|EFC30759.1| alanine racemase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 328

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 137/365 (37%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++          L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++      +   +  L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAINLIRSSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  +       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGES-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKV--- 276

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                ILGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 277 -----ILGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|315636229|ref|ZP_07891483.1| alanine racemase [Arcobacter butzleri JV22]
 gi|315479590|gb|EFU70269.1| alanine racemase [Arcobacter butzleri JV22]
          Length = 340

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/374 (20%), Positives = 140/374 (37%), Gaps = 49/374 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ +    L  N   ++  +G+    AVV KDNAYG G  +IA      G++   V +
Sbjct: 1   MAKILLSKENLFYNLDVISKKAGSKEKVAVVLKDNAYGHGLVEIATLAKEFGIKKAVVRT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +++ +K+        +      H          N                +     +   
Sbjct: 61  IDDALKIEKLFDFILVLAEKSFHTYSHTFHIALNS------------LEDIDKLPNNSNV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VDTG +R G+  ++         ++K  +++ + +H   AD+ S+     Q E F  
Sbjct: 109 HIKVDTGMHRNGIYPEDLEK-AFLGLSEKNIKVTGVFTHHRGADELSTDFF-WQKENFSL 166

Query: 185 LISHYKGIEASL---------ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--Q 233
           +    K I   L          +S+ +    N+    TR GI+ YG  D  +  +    +
Sbjct: 167 VKKSVKNICEKLFLPIPLFHSCNSAALFRTENFDEDFTRVGIATYGYLDDSDVFNFPKLK 226

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++  A  +  R    G+ V YGG    T D L++   +GY DG+        +E    
Sbjct: 227 PVMSLWASRLSTRILKKGQSVGYGGTFTTTEDMLVSTYDVGYGDGFLR-----LNERKSY 281

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
               G          +LG+++MD    + TD       + + IF     + ++A    T 
Sbjct: 282 TTPKG--------YKVLGRVSMDNLSLN-TDD------EKVCIFDD---VRELAKIHDTI 323

Query: 354 NYDLLVRIGTRYAK 367
            Y++   +     K
Sbjct: 324 TYEITTTLNPNIEK 337


>gi|317133108|ref|YP_004092422.1| alanine racemase [Ethanoligenens harbinense YUAN-3]
 gi|315471087|gb|ADU27691.1| alanine racemase [Ethanoligenens harbinense YUAN-3]
          Length = 364

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 76/349 (21%), Positives = 122/349 (34%), Gaps = 23/349 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPAL-YNAGVQDFFVTS 64
              L +    +  N  +M   + N     V+K NAYGLG  ++A  L   A V  F V+ 
Sbjct: 1   MSTLVVQTGHILANLEAMRKHT-NVPVIPVLKGNAYGLGDVEVARLLREKADVHLFAVSR 59

Query: 65  VEEGVKLRLYTPQAR-IFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSH 122
           +EE  +L+   P      +       + + I    L   + S       +      G   
Sbjct: 60  LEEAKRLKEALPDEEIFLLSPYGTEKEAEEIVRLGLTATVGSYGSAVLLNGLSEKAGTRC 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L+ DTG  R G   +EA      +   K  +++   SH + +          QL+R 
Sbjct: 120 RVHLKFDTGLGRSGFLPEEAEKAVQAAKYLKNLEIAGCFSHFSNSFGKDEKGVRTQLDRL 179

Query: 183 RTLIS--HYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           +  ++     G+E  +   +     +L P+      R G +L G     NK   +  V  
Sbjct: 180 QHCVAALKNAGVEPGMLHIAASNAAILYPSARLDAVRCGSALLGRVGVRNK-LGLHKVGR 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL------------SG 285
            E  I  +R   AG  V YG      + + IA    GYADG  L               G
Sbjct: 239 LECPISDVRWLPAGHNVGYGNTYTTKKPARIATIQAGYADGLFLQKMRDAFRTRDILRDG 298

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                +          I G    +LG++ M   + D+++      GD  
Sbjct: 299 WHDFRALFRRPSLHCTINGQPARLLGRVGMCTVVADVSNI-QCGAGDMA 346


>gi|57242224|ref|ZP_00370163.1| alanine racemase, putative [Campylobacter upsaliensis RM3195]
 gi|57016904|gb|EAL53686.1| alanine racemase, putative [Campylobacter upsaliensis RM3195]
          Length = 327

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 50/366 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + +D  A K+N   +   +G   +   V KDNAYG G   +AP     GV    V    E
Sbjct: 4   ITLDSNAYKHNLSYIATRAGGYDKLICVFKDNAYGHGICLLAPVAKACGVNFVAVKDENE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
              L  Y       +L     G E + F          +  L   S       +    L+
Sbjct: 64  AYLLEKYFDNI--LILSHRPTGNENLNF----------IYALNEPSSFAKFKKNTRIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DT  +R G+   +               L    +H   AD+  +   + Q   F+    
Sbjct: 112 IDTNMHRNGI---DVNGLEKFLKELCHLNLEGAFTHFMSADELDASYFT-QKYNFQKAKK 167

Query: 188 HYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             K      +     +SS +  G     ++ R G+  +G          ++ V+   A  
Sbjct: 168 IIKNFTQNTLTFHSFNSSALFRGKMPQDEMCRVGLVQFGYG-----DKGLKKVLRLYAHK 222

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  R    G+ V YGG         IA   +GYADG          +             
Sbjct: 223 LSSRVLEKGQSVGYGGAYVANEPLQIATYDLGYADGLFRYDGKGQLK-----------LA 271

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G    +LGK++MD    +       + G+ I +       +  A    T NY++LV++ 
Sbjct: 272 NGK--EMLGKMSMDSFSCE-------DSGEEICVLDD---ANLWADFFHTINYEILVKLN 319

Query: 363 TRYAKF 368
               + 
Sbjct: 320 ANIKRV 325


>gi|257466861|ref|ZP_05631172.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 360

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 66/385 (17%), Positives = 125/385 (32%), Gaps = 50/385 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  + F  L+++  A+ +N + +           V+K NAYG G  ++A     AGV   
Sbjct: 1   MVEHSFY-LEVNREAILHNINVLRKW-KRKDIIPVIKANAYGHGMLEMAKTCVQAGVTQV 58

Query: 61  FVTSVEEGVKLRL------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK 114
            V   EE  K+         + +    +L     G    + D      IS          
Sbjct: 59  AVARYEEAKKILEDSYFQSLSKECSFQILIFESIGDFS-LLDHFPRMDISINSLEELEKA 117

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           L          +++D  F R G+  ++   F      + L    +     +C+ +     
Sbjct: 118 LEYHISPKKMQVKIDFSFGRNGIQEKDLPFFIKKVKEENLTFKGIFSHLFSCSYEDGLLC 177

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                   + +            S++      +    + R G+  YG  +       +Q 
Sbjct: 178 IKKFSSLVQEMGKERFDRIHLQNSAASYNYDCDIVTDI-RVGMLTYGLQEPGYFHEELQR 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKK--LTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +I  IR     + ++Y G++   +      A   IGYADG+             
Sbjct: 237 AFCLKGKIDSIRCLENMKYLAYEGKEDVGMKSAKWAAKIKIGYADGF------------G 284

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----------GPDIK 342
                G   I+     I  ++TMD T  ++     ++VGD + +F          G +I 
Sbjct: 285 KENENGSCIIQRKEYRIA-EVTMDNTFLEV--DERVKVGDEVLLFYNPTKTKQETGKEI- 340

Query: 343 LDDVALASGTTNYDLLVRIGTRYAK 367
                       ++ L  +  R  +
Sbjct: 341 ------------HEHLTGLTNRLPR 353


>gi|294853874|ref|ZP_06794546.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294819529|gb|EFG36529.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 152

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT 282
            +     H +  V+T  AR+I +R    G  V YGG         IA  A+GYADG   +
Sbjct: 3   HENKKPKHSILPVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLFRS 62

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPD 340
           LS             G  F     +PI+G+++MD    D+T      +++G  +++ GP 
Sbjct: 63  LSN-----------KGAAFFGDTRLPIIGRVSMDSITLDVTSLPEGTLKLGSLVELIGPH 111

Query: 341 IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +L+DVA    T  Y++L  +G RYA+ Y
Sbjct: 112 QRLEDVARDCDTIPYEILTALGNRYARVY 140


>gi|157737037|ref|YP_001489720.1| alanine racemase [Arcobacter butzleri RM4018]
 gi|226711026|sp|A8ESX7|ALR_ARCB4 RecName: Full=Alanine racemase
 gi|157698891|gb|ABV67051.1| alanine racemase [Arcobacter butzleri RM4018]
          Length = 340

 Score =  140 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 74/374 (19%), Positives = 139/374 (37%), Gaps = 49/374 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ +    L  N   ++  +G+    AVV KDNAYG G  +IA      G++   V +
Sbjct: 1   MAKILLSKENLFYNLDVISKKAGSKEKVAVVLKDNAYGHGLVEIATLAKEFGIKKAVVRT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           +++ +K+        +      H          N                +     +   
Sbjct: 61  IDDALKIEKLFDFILVLAEKSFHTYSHTFHIALNS------------LEDIDKLPNNSNV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            ++VDTG +R G+  ++          ++  +++ + +H   AD+ S+     Q E F  
Sbjct: 109 HIKVDTGMHRNGIYPEDLEK-AFLGLLERNIKVTGVFTHHRGADELSTDFF-WQKENFSL 166

Query: 185 LISHYKGIEASL---------ASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPM--Q 233
           +    K I   L          +S+ +    N+    TR GI+ YG  D  +  +    +
Sbjct: 167 VKKSVKNICEKLFLPIPLFHSCNSAALFRTENFDEDFTRVGIATYGYLDDSDVFNFPKLK 226

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++  A  +  R    G+ V YGG    T D L++   +GY DG+        +E    
Sbjct: 227 PVMSLWASRLSTRILKKGQSVGYGGTFTTTEDMLVSTYDVGYGDGFLR-----LNERKSY 281

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
               G          +LG+++MD    + TD       + + IF     + ++A    T 
Sbjct: 282 TTPKG--------YKVLGRVSMDNLSLN-TDD------EKVCIFDD---VRELAKIHDTI 323

Query: 354 NYDLLVRIGTRYAK 367
            Y++   +     K
Sbjct: 324 TYEITTTLNPNIEK 337


>gi|34557112|ref|NP_906927.1| alanine racemase [Wolinella succinogenes DSM 1740]
 gi|34482827|emb|CAE09827.1| ALANINE RACEMASE [Wolinella succinogenes]
          Length = 342

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 81/377 (21%), Positives = 139/377 (36%), Gaps = 51/377 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              L+I+  A  +N   +    G+    AVV KDNAYG G  ++A     AG+   FV +
Sbjct: 1   MAELRINSQAFFHNLKLLANHVGSKEKVAVVLKDNAYGHGLLEMALLCKEAGIASAFVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E +++      A  F       G  +     N+   + S+ Q+               
Sbjct: 61  EAEAIRI------APYFESVTALYGDVESKSPANVWVALHSLEQIRRI------PKGRSV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR- 183
            L+VDTG NR G+  +E          + L    ++  +    D+  S   S Q  RF  
Sbjct: 109 ELKVDTGMNRNGIMEEELFVALEAIRAQGLILCGVMAHN-GYGDELGSEFFSQQR-RFEG 166

Query: 184 -----TLISHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPM 232
                   +   G+        SSSG L   N    L R GI++YG       +     +
Sbjct: 167 VRARVEEYAREHGLPRPRFHALSSSGALRSRNIQDDLVRFGIAIYGYLCAHPLVVSEIGL 226

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRD-SLIAVAAIGYADGYPLTLSGLDSEHS 291
           + V++  AR I  +    G  + YGG+ +L  +   ++   +GY DG+        +EH 
Sbjct: 227 RPVLSLWARRITTKSLPKGARIGYGGKSELEEEAKKVSTYDVGYGDGFYR-----LNEHH 281

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
             +   G+         IL +++MD           +   + + +        ++A    
Sbjct: 282 KLLTAQGE--------RILPRVSMDCLSV-------VGEREEVCLM---EDASELARLFD 323

Query: 352 TTNYDLLVRIGTRYAKF 368
           T  Y++L R      + 
Sbjct: 324 TIPYEVLTRFSPFLKRV 340


>gi|317121371|ref|YP_004101374.1| alanine racemase [Thermaerobacter marianensis DSM 12885]
 gi|315591351|gb|ADU50647.1| alanine racemase [Thermaerobacter marianensis DSM 12885]
          Length = 514

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 64/364 (17%), Positives = 113/364 (31%), Gaps = 37/364 (10%)

Query: 9   LKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +++DL  L  N  ++        R  AVVK + YGLG E  A  L  AG       ++E 
Sbjct: 16  IEVDLDVLAANLAAVRRFVRPGTRILAVVKGDGYGLGAEMAARTLVAAGADGLGTDTLEA 75

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV------- 120
            ++LR     A I V   + P          L   +     L   ++             
Sbjct: 76  ALRLRRAGITAPILVFQPVDPALAHHWVREGLTATVHDETTLRRLAQAAESARAGQAART 135

Query: 121 -----SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
                     L+VD GF R G            + +    ++  + +H   A  P   + 
Sbjct: 136 GSPPGPCAVHLEVDMGFGRGGFHPDRVAAALAEAQSLPGIRVEGLYAHFPTAARPGLALR 195

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINKSHPM 232
            +            +G+   L   +   L     +    + R G  LYG   +  +   +
Sbjct: 196 LLDRFLRLVQRLEQQGLRPPLVHCAESHLLVLASHAQLDMVRVGNLLYGYAPRAARRAGL 255

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP-----LTLSGL- 286
                +   + +     A  L            + +AV  +G ADG          S   
Sbjct: 256 AVRPPSRLVVRVGAVRRAASLDPGYRGGWARPGAPVAVLPVGLADGLRPVREARFWSDRL 315

Query: 287 --------------DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD 332
                             +  +  G +  + G  VP+ G+  M+  + D T    +E G 
Sbjct: 316 VILARRLLGALGASRVLGAAGLPPGPRLRVGGREVPLRGEFMMNHCLLDATGL-DLEPGQ 374

Query: 333 YIQI 336
            +++
Sbjct: 375 EVEL 378


>gi|86152054|ref|ZP_01070266.1| alanine racemase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315124401|ref|YP_004066405.1| alanine racemase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|85840839|gb|EAQ58089.1| alanine racemase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315018123|gb|ADT66216.1| alanine racemase [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 328

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++          L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++          +  L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAIDLIQSSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKKVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKVM-- 277

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 278 ------LGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|57237734|ref|YP_178982.1| alanine racemase [Campylobacter jejuni RM1221]
 gi|81819521|sp|Q5HUQ3|ALR_CAMJR RecName: Full=Alanine racemase
 gi|57166538|gb|AAW35317.1| alanine racemase [Campylobacter jejuni RM1221]
 gi|315058345|gb|ADT72674.1| Alanine racemase [Campylobacter jejuni subsp. jejuni S3]
          Length = 328

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 134/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S+           L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQAKKYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++          +  L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAIDLIQSSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKVM-- 277

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 278 ------LGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|157415162|ref|YP_001482418.1| alanine racemase [Campylobacter jejuni subsp. jejuni 81116]
 gi|226711032|sp|A8FLV4|ALR_CAMJ8 RecName: Full=Alanine racemase
 gi|157386126|gb|ABV52441.1| alanine racemase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747805|gb|ADN91075.1| Alanine racemase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932613|gb|EFV11544.1| alanine racemase [Campylobacter jejuni subsp. jejuni 327]
          Length = 328

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++          L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++          +  L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAIDLIRSSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKVM-- 277

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 278 ------LGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|86153256|ref|ZP_01071460.1| alanine racemase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613298|ref|YP_001000580.1| alanine racemase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005511|ref|ZP_02271269.1| alanine racemase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|226711034|sp|A1VZN9|ALR_CAMJJ RecName: Full=Alanine racemase
 gi|85842982|gb|EAQ60193.1| alanine racemase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249470|gb|EAQ72430.1| alanine racemase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 328

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++          L+
Sbjct: 61  ---------EEEAQEIEEFFENILILSHRPHGNENSRFIYALNDISQVKKYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++          +  L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAIDLIRSSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSHNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKKVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKVM-- 277

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 278 ------LGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|20137235|sp|Q9F9L1|ALR_PISSA RecName: Full=Alanine racemase
 gi|10441347|gb|AAG17001.1|AF184152_4 alanine racemase [Piscirickettsia salmonis]
          Length = 166

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 14/172 (8%)

Query: 198 SSSGILLGPNYHFQLTRPGISLYGGTDKINK---SHPMQTVVTAEARIILIRKALAGELV 254
           +S+ I       +   RPGI LYG +   +K      +Q V+   +R+I +++   GE V
Sbjct: 1   NSAAIFNFSYERYDWVRPGIMLYGISPFADKNGVDLELQPVMHVVSRLISVKQLRQGESV 60

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT 314
            YG   +   D  + + ++GY DGYP                G    ++G    ++G+++
Sbjct: 61  GYGATWQCPEDMQVGILSLGYGDGYPRLA-----------ASGTPFLVRGQRCALIGRVS 109

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           MDM   D+       VG+ + ++G D+ ++++A   GT  Y+L+  +  R  
Sbjct: 110 MDMIAIDLRRCPDAGVGEAVTVWGQDLPVEEIARHVGTIAYELVCNMPLRAP 161


>gi|325846728|ref|ZP_08169643.1| putative alanine racemase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481486|gb|EGC84527.1| putative alanine racemase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 177

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 19/179 (10%)

Query: 195 SLASSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQTVVTAEARIILIRKALA 250
              S++   +  N+   L R GI +YG              +      +A+I  I+    
Sbjct: 1   MHISNTAASMEYNFKSDLLRLGIGIYGIYPSDYIREISKIKLCQAFEFKAQISFIKDVRK 60

Query: 251 GELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL 310
           G  +SYG      +D  +A  ++GYADG+  + S             G+  + G +  ++
Sbjct: 61  GTSISYGRTYIAPKDIKVATVSVGYADGFKRSFSNT-----------GEVLVNGKIAKVV 109

Query: 311 GKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           G++ MD  M D++     ++GDYI ++ PDI  +  A    T  Y+L+  I  R  + Y
Sbjct: 110 GRVCMDQIMVDVSGI-DCKIGDYITLY-PDIYKE--ANKIHTIAYELMTSISNRVPRIY 164


>gi|294853873|ref|ZP_06794545.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294819528|gb|EFG36528.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 309

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/186 (37%), Positives = 103/186 (55%), Gaps = 2/186 (1%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L IDL AL++N+ ++       RTAAVVK +AYGLG  ++APA Y AG +DFFV  + E 
Sbjct: 21  LTIDLAALRHNYSAIATRIAPTRTAAVVKADAYGLGASRVAPAFYEAGCRDFFVAHLGEA 80

Query: 69  VKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYAL 126
           V L+ +  P A ++VL G+ PG E       ++PV++S+ Q+  ++ L    G   P  L
Sbjct: 81  VALKPFLKPDATLYVLNGLQPGTEAACAREGILPVLNSLEQVENWAALATRLGKKLPALL 140

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
           Q DTG +RLGLS +E      N        +   ISHLA  D+P +  N+ QL +   L+
Sbjct: 141 QFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAANARQLAKMTALL 200

Query: 187 SHYKGI 192
           +    +
Sbjct: 201 ARLPKL 206


>gi|315929851|gb|EFV09014.1| alanine racemase [Campylobacter jejuni subsp. jejuni 305]
          Length = 328

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 78/365 (21%), Positives = 136/365 (37%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++ +        L+
Sbjct: 61  ---------EEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++      +      L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAINLIQGSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSYNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG         +     V   GK    
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----YNGKGELVLGNGKVM-- 277

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 278 ------LGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|289422485|ref|ZP_06424328.1| alanine racemase 2 [Peptostreptococcus anaerobius 653-L]
 gi|289157057|gb|EFD05679.1| alanine racemase 2 [Peptostreptococcus anaerobius 653-L]
          Length = 372

 Score =  139 bits (351), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 80/347 (23%), Positives = 130/347 (37%), Gaps = 26/347 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            RL IDL AL  N   +  ++G     AVVK++AY  G E+     Y AGV+ F  TS+ 
Sbjct: 12  PRLTIDLDALHKNARHLIGMTGGG-LIAVVKNDAYHFGLERAVETFYQAGVRFFATTSLR 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           + +++R       IF+L          + D ++   ++S+    F  +         Y L
Sbjct: 71  DSIRIRDLYDDVDIFMLNPC--RDFDSLRDYSITATLASL---DFLRENKDSMHDISYHL 125

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ----LERF 182
           +      R G   ++ +  T     +   +L  I +H + AD+     +  +        
Sbjct: 126 EWAGQMRRSGCRSKKEVLETIRLAKESNIKLDGIWTHFSWADEFDQENSYEKEKSDWLDI 185

Query: 183 RTLISHYKGIEASLASSSGILLGPNY--HFQLTRPGISLYGGTDKINKSH-PMQTVVTAE 239
                     +   A +S  L       +    R GISLYG               +T  
Sbjct: 186 LESAQKIHKFKVVQAQNSASLQRDGLLDNHSHARVGISLYGCPPYKGADLTNNHHALTLS 245

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
             II I+    GE + Y    K  + S + V  IGY DG                 +G  
Sbjct: 246 GSIISIKDLEIGESIGYCSSFKADKKSRVGVINIGYGDGLLRK-----------RVMGHD 294

Query: 300 GFIKGYMVPILGKITMDMTMFDI-TDSLSIEVGDYIQIFGPDIKLDD 345
             I G   P++  + M  T+  +  D  S++VGD    +G DI + +
Sbjct: 295 VLINGRRYPLV-SMMMSHTIVLLNEDDNSVKVGDQAIFYGQDIPVYE 340


>gi|148926587|ref|ZP_01810269.1| alanine racemase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205356390|ref|ZP_03223155.1| alanine racemase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|145845281|gb|EDK22375.1| alanine racemase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|205345775|gb|EDZ32413.1| alanine racemase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 328

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++ +        L+
Sbjct: 61  ---------EEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++      +      L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAINLIQGSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSYNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG                  G      
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----------YNGKGELVLGN 273

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    +LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 274 GKT--MLGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|153951186|ref|YP_001398023.1| alanine racemase [Campylobacter jejuni subsp. doylei 269.97]
 gi|226711033|sp|A7H3E3|ALR_CAMJD RecName: Full=Alanine racemase
 gi|152938632|gb|ABS43373.1| alanine racemase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 328

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 76/365 (20%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++ +        L+
Sbjct: 61  ---------EEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----R 183
           +DTG +R G+ ++          +  L +L+ + +H A AD+       VQ E F    +
Sbjct: 112 IDTGMHRNGICVENLEHAIDLIRSSNL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ +++  A  +
Sbjct: 170 MVKKYFSNLLFHSHNSAALFRGKIPEDEYCRIGLVQFGYGDS-----NLKRILSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG                  G      
Sbjct: 225 SQRILQKGQSIGYGGIFTAVKDMEVATYDLGYADGLFR-----------YNGKGELVLGN 273

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    +LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 274 GKA--MLGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|315638691|ref|ZP_07893865.1| alanine racemase [Campylobacter upsaliensis JV21]
 gi|315481315|gb|EFU71945.1| alanine racemase [Campylobacter upsaliensis JV21]
          Length = 327

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 74/366 (20%), Positives = 121/366 (33%), Gaps = 50/366 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + +D  A K+N   +   +G   +   V KDNAYG G   +AP     GV    V    E
Sbjct: 4   ITLDSNAYKHNLSYIATRAGGYDKLICVFKDNAYGHGICLLAPVAKACGVNFVAVKDENE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
              L  Y       +L     G E + F          +  L   S       +    L+
Sbjct: 64  AYLLEKYFDNI--LILSHRPTGNENLNF----------IYALNEPSSFAKFKKNTRIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +DT  +R G+   +               L    +H   AD+  +   + Q   F+    
Sbjct: 112 IDTNMHRNGI---DVNGLEKFLKELCHLNLEGAFTHFMSADELDASYFT-QKYNFQKAKK 167

Query: 188 HYKG-----IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             K      +     +SS +  G     ++ R G+  +G          ++ V+   A  
Sbjct: 168 IIKNFTQNTLTFHSFNSSALFRGKMPQDEMCRVGLVQFGYG-----DKGLKKVLRLYAHK 222

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           +  R    G+ V YGG         IA   +GYADG          +             
Sbjct: 223 LSSRVLEKGQSVGYGGAYVANEPLQIATYDLGYADGLFRYDGKGQLK-----------LA 271

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIG 362
            G    +LGK++MD    +       + G  I +       +  A    T NY++LV++ 
Sbjct: 272 NGK--EMLGKMSMDSFSCE-------DSGGEICVLDD---ANLWADFFHTINYEILVKLN 319

Query: 363 TRYAKF 368
               + 
Sbjct: 320 ANIKRV 325


>gi|255322065|ref|ZP_05363213.1| alanine racemase [Campylobacter showae RM3277]
 gi|255300878|gb|EET80147.1| alanine racemase [Campylobacter showae RM3277]
          Length = 333

 Score =  139 bits (349), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 74/370 (20%), Positives = 134/370 (36%), Gaps = 44/370 (11%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              L ++ +A  +N   + A +G   R   V+KDNAYG G   +     + G++   V +
Sbjct: 1   MSELVLNRSAYIHNLTKICAKAGGKDRVILVLKDNAYGHGAALVGREAASYGIKFCAVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E  +L     +  + + +  + G+ +                +   S +         
Sbjct: 61  EVEAREL-EPFFEHILILSHIPNGGESERFI-----------YSVNDISLIAKFKKGARV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VDT  +R G+S+ E       S      Q+    +H   A++ SS    VQ   F  
Sbjct: 109 HIAVDTLMHRNGVSVGEV-RAACESALAHGLQICGAFTHFRSAEELSSDYF-VQRRNFAA 166

Query: 185 LIS-----HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
             +        G+     +S+          +  R GI+ YG   + + S  ++ V +  
Sbjct: 167 AKAVVREICGDGLVFHSHNSAATERFGELADEYVRVGIAAYG-YAQFDDSLGLKRVASLW 225

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A  +  R    G+   YG +   + D  IAV  +GY DG        + + +        
Sbjct: 226 AHKVSGRVLKKGQCAGYGAKFCASEDMQIAVYDLGYGDGLLRYTGEGELKTA-------- 277

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
               G    +LGK++MD              GD I +F         A   GT +YD+L 
Sbjct: 278 ---GGQR--LLGKMSMDSFC-----CEDA--GDRICVFDD---ARVWADFFGTISYDVLT 322

Query: 360 RIGTRYAKFY 369
           ++    ++ +
Sbjct: 323 KLSPSISRRF 332


>gi|86150261|ref|ZP_01068488.1| alanine racemase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597602|ref|ZP_01100836.1| alanine racemase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562525|ref|YP_002344304.1| alanine racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|20137244|sp|Q9PP26|ALR_CAMJE RecName: Full=Alanine racemase
 gi|85839377|gb|EAQ56639.1| alanine racemase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190194|gb|EAQ94169.1| alanine racemase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360231|emb|CAL35026.1| alanine racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
 gi|284926139|gb|ADC28491.1| alanine racemase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315927545|gb|EFV06878.1| alanine racemase [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 328

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 77/365 (21%), Positives = 135/365 (36%), Gaps = 47/365 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           +KID  A + N   +    G+  R   V KDNAYG G + +AP   N GV    V S   
Sbjct: 4   IKIDQKAYEYNLRHIAKKIGSFQRLICVFKDNAYGHGAKLLAPLAKNLGVSFVAVKS--- 60

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
                    +     +         +    +       +  L   S++ +        L+
Sbjct: 61  ---------EEEAREIEEFFENILILSHRPHGNENSRFIYALNDISQVKNYKQDIKIHLK 111

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+ ++      +      L +L+ + +H A AD+       VQ E F+    
Sbjct: 112 IDTGMHRNGICVENLEHAINLIQGSDL-KLTGMFTHFASADEMDGSFF-VQKENFQKAKK 169

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +  ++  +     +S+ +  G     +  R G+  +G  D       ++ V++  A  +
Sbjct: 170 IVKKYFSNLLFHSYNSAALFRGKIPEDEYCRVGLVQFGYGDS-----NLKRVLSLYAHRL 224

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G+ + YGG     +D  +A   +GYADG                  G      
Sbjct: 225 SQRILQKGQSIGYGGIFTAAKDMEVATYDLGYADGLFR-----------YNGRGELVLGN 273

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G    +LGK++MD    +         G+ I +F      D  A    T NY++LV++  
Sbjct: 274 GKA--MLGKMSMDSFSCE-------NSGEEICVFKD---ADIWADFFHTINYEILVKLNP 321

Query: 364 RYAKF 368
              + 
Sbjct: 322 NIQRV 326


>gi|315918009|ref|ZP_07914249.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691884|gb|EFS28719.1| alanine racemase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 359

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 122/377 (32%), Gaps = 49/377 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+++  A+ +N + +           V+K NAYG G  ++A     AGV    V   EE 
Sbjct: 7   LEVNREAILHNINVLRKW-KRKDIIPVIKANAYGHGMLEMAKTCVQAGVTQVAVARYEEA 65

Query: 69  VKLRL------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            K+         + +    +L     G    + D      IS          L       
Sbjct: 66  KKILEDSYFQSLSKECSFQILIFESIGDFS-LLDHFPRMDISINSLEELEKALEYHISPK 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++D  F R G+  ++   F      + L    +     +C+ +             
Sbjct: 125 KMQVKIDFSFGRNGIQEKDLPFFIKKVKEENLTFKGIFSHLFSCSYEDGLLCIKKFSSLV 184

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + +            S++      +    + R G+  YG  +       +Q     + +I
Sbjct: 185 QEMGKERFDRIHLQNSAASYNYDCDIVTDI-RVGMLTYGLQEPGYFHEELQRAFCLKGKI 243

Query: 243 ILIRKALAGELVSYGGQKK--LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
             IR     + ++Y G++   +      A   IGYADG+                  G  
Sbjct: 244 DSIRCLENMKYLAYEGKEDVGMKSAKWAAKIKIGYADGF------------GKENENGSC 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----------GPDIKLDDVALAS 350
            I+     I  ++TMD T  ++     ++VGD + +F          G +I         
Sbjct: 292 IIQRKEYRIA-EVTMDNTFLEV--DERVKVGDEVLLFYNPTKTKQETGKEI--------- 339

Query: 351 GTTNYDLLVRIGTRYAK 367
               ++ L  +  R  +
Sbjct: 340 ----HEHLTGLTNRLPR 352


>gi|224373382|ref|YP_002607754.1| alanine racemase [Nautilia profundicola AmH]
 gi|223589034|gb|ACM92770.1| alanine racemase [Nautilia profundicola AmH]
          Length = 324

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 74/364 (20%), Positives = 133/364 (36%), Gaps = 57/364 (15%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
               L +N + ++ ++ N    AV+KDNAYG G    +  L   G+    V + +E   +
Sbjct: 7   HKQNLFDNLNKISKINPN--ILAVIKDNAYGHGIISFSKMLKEWGINKVCVKNNDEAEVI 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           +                 +E IIF  +      +        K +         L++DTG
Sbjct: 65  KSLF--------------EEIIIFFPHTGRSAKNFSYCINSLKQLKKNRHPYIHLKIDTG 110

Query: 132 FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT------- 184
            +R G+ + E  +      +K   ++  + +H  C+D+ ++ +  +Q ERF+        
Sbjct: 111 MHRNGILMDELEEALKIIKDK-EFEVRGVFTHFCCSDETANDMF-IQYERFKKIKNRVEV 168

Query: 185 -LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
               +   I     ++S  L      F   RPGI+LYGG +        + V+   A ++
Sbjct: 169 FCKENEIKIPYFHIANSYALDKLPDTFDYVRPGIALYGGIE------GYKPVMELRADVL 222

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
             R    G    Y        D  +    +GY DG P   +G   + + +          
Sbjct: 223 SSRILKKGWGCGYNKIYMSDEDIEVTTIDVGYGDGLPYFKNGCKLKDAEA---------- 272

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
                 LGKI+MD  +              + +F     + +      T  YD+LV+I  
Sbjct: 273 ------LGKISMDSMII-----KGCFE-KEVVVFDD---VKEFVKNFDTITYDILVKISP 317

Query: 364 RYAK 367
           R  +
Sbjct: 318 RIKR 321


>gi|257452771|ref|ZP_05618070.1| alanine racemase [Fusobacterium sp. 3_1_5R]
          Length = 360

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 63/385 (16%), Positives = 128/385 (33%), Gaps = 50/385 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  + F  L+++  A+ +N + +           V+K NAYG G  ++A     AGV   
Sbjct: 1   MVEHSFY-LEVNREAILHNINVLRKW-KRKDIIPVIKANAYGHGMLEMAKTCVQAGVTQV 58

Query: 61  FVTSVEEGVKLRL------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK 114
            V   EE  K+         + +    +L     G   ++ D   + +  +  +    + 
Sbjct: 59  AVARYEEAKKILEDSYFQSLSKECSFQILIFESIGDFSLLDDFPRMDISINSLEELEKA- 117

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           L          +++D  F R G+  ++   F      + L    +     + + +     
Sbjct: 118 LEYHISPKKMQVKIDFSFGRNGIQEKDLPFFIKKVKEENLTFKGIFSHLFSSSYEDGLLC 177

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                   + +            S++      +    + R G+  YG  +       +Q 
Sbjct: 178 IKKFSSLVQEMGKERFDRIHLQNSAASYNYDCDIVTDI-RVGMLTYGLQEPGYFHEELQR 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRD--SLIAVAAIGYADGYPLTLSGLDSEHSP 292
               + +I  IR     + ++Y G++ +        A   IGYADG+             
Sbjct: 237 AFCLKGKIDSIRCVENMKYLAYEGKEDVGMKFAKWAAKIKIGYADGF------------G 284

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----------GPDIK 342
                G   I+     I  ++TMD T  ++     ++VGD + +F          G +I 
Sbjct: 285 KENENGSCIIQRKEYRIA-EVTMDNTFLEV--DERVKVGDEVLLFYNPTKTKQETGKEI- 340

Query: 343 LDDVALASGTTNYDLLVRIGTRYAK 367
                       ++ L  +  R  +
Sbjct: 341 ------------HEHLTGLTNRLPR 353


>gi|149194319|ref|ZP_01871416.1| alanine racemase [Caminibacter mediatlanticus TB-2]
 gi|149135494|gb|EDM23973.1| alanine racemase [Caminibacter mediatlanticus TB-2]
          Length = 331

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 81/371 (21%), Positives = 136/371 (36%), Gaps = 64/371 (17%)

Query: 9   LKIDLT--ALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             I L    L  N   +++++ N    AV+KDNAYG G   I+  L   G++   V +++
Sbjct: 2   ATIYLNKTNLFYNLQKISSINPN--IIAVIKDNAYGHGIISISKLLKEYGIKKVCVRNID 59

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E   +R       I +             +   I    ++  LT               L
Sbjct: 60  EANLVR--GFFEEILIFNSPT--------NRGAINFSYTINSLTQLK----KNRHPYIHL 105

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
           ++DTGF R G+   E  +       K   +L  + SH  CAD+       +Q ++F    
Sbjct: 106 KIDTGFRRNGILENELDEALDLIKKK-EFELRGVFSHFCCADEFGCD-TFIQYDKFLKIK 163

Query: 183 ----RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
               +        I     ++S  L    +     RPGI++YGG D        + V++ 
Sbjct: 164 EKIVKFCKESKLKIPYFHIANSAALNKLPHTLDYVRPGIAIYGGID------GYKPVMSL 217

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
           EA ++ +R     E   Y           I+   +GYADG P   +G   + + +     
Sbjct: 218 EADVVSVRVLDEKEGCGYNKTFMSDDKIKISTVDVGYADGIPYFRNGCKLKDTIA----- 272

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD--YIQIFGPDIKLDDVALASGTTNYD 356
                      LGKI+MD  +           G+   + IF     + +      T  YD
Sbjct: 273 -----------LGKISMDYMIVK---------GEFKKVIIFDD---VKEFVKNFDTITYD 309

Query: 357 LLVRIGTRYAK 367
           +LV++  R  +
Sbjct: 310 ILVKMSPRIKR 320


>gi|241767429|ref|ZP_04765128.1| alanine racemase [Acidovorax delafieldii 2AN]
 gi|241361801|gb|EER58070.1| alanine racemase [Acidovorax delafieldii 2AN]
          Length = 270

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 14/266 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I  +AL +N   +     +A+T AVVK NAYG G E++   L       F +  
Sbjct: 11  RPIHATIHASALHHNLERVRQAVPDAKTWAVVKANAYGHGIERVFEGLRA--ADGFALLD 68

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++E  ++R    +  I +L G+  P   ++     L   +    Q+   +   +  V H 
Sbjct: 69  LDEAERVRHLGWRGPILLLEGVFEPRDLELCSRLGLWHAVHCDEQIDMLAAHKTQ-VPHR 127

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             L++++G NRLG + Q                    ++H + AD P     + Q++ F 
Sbjct: 128 VFLKLNSGMNRLGFTPQRYRSAWARLNALPQVDEISFMTHFSDADGPRGI--AHQVQTFN 185

Query: 184 TLISHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINKSHPMQTV----V 236
                  G E S+ +S+  L             R GI LYG      +    Q      +
Sbjct: 186 AATQDLPG-ERSICNSAATLRHAGDAQVRGDWVRAGIVLYGSAPDHPEHTAAQWDLQPSM 244

Query: 237 TAEARIILIRKALAGELVSYGGQKKL 262
           T   RII  ++  AG+ V YG +   
Sbjct: 245 TLATRIIGTQQLQAGDTVGYGSRFTA 270


>gi|254507449|ref|ZP_05119584.1| alanine racemase 1 [Vibrio parahaemolyticus 16]
 gi|219549705|gb|EED26695.1| alanine racemase 1 [Vibrio parahaemolyticus 16]
          Length = 113

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 11/123 (8%)

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
             AGE V YGG+    RD+ + V AIGY DGYP T              G    + G  V
Sbjct: 1   MKAGESVGYGGKWTSERDTKVGVIAIGYGDGYPRTAPN-----------GTPVRVNGREV 49

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           PI G+++MDM   D+    +  VGD   ++G D+  + VA   GT  Y+L+ ++ +R   
Sbjct: 50  PIAGRVSMDMLTVDLGPEATDHVGDEAILWGKDLPAEQVAAHIGTIAYELVTKLTSRVEM 109

Query: 368 FYT 370
            Y+
Sbjct: 110 EYS 112


>gi|157164787|ref|YP_001466519.1| alanine racemase [Campylobacter concisus 13826]
 gi|226711030|sp|A7ZCL1|ALR_CAMC1 RecName: Full=Alanine racemase
 gi|112800684|gb|EAT98028.1| alanine racemase [Campylobacter concisus 13826]
          Length = 337

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 82/373 (21%), Positives = 141/373 (37%), Gaps = 52/373 (13%)

Query: 10  KIDLT--ALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +I L   A  +N   +   +G       V+KDNAYG G   IA      G+++  V S  
Sbjct: 3   EIHLNKAAYIHNLTKICDKAGGKENVIVVLKDNAYGHGARLIASEAKKFGIKNCAVKSEC 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  ++        I +L  +  G E   F             +     L+    +    L
Sbjct: 63  EANEI--ADIFENILILSHVPTGDESAKFTY----------AINDIDALLKIKENTKINL 110

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
            +DTG +R GL + E          ++  +L    +H   +D+ ++    VQ E F    
Sbjct: 111 AIDTGMHRNGLDISELDY-AFEILARRNLELLGAYTHFRASDELNADYF-VQRENFSAAK 168

Query: 187 SHYKGIE---------ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT 237
           +    +              +S+ +        ++ R GI+ YG   + N S  ++ V++
Sbjct: 169 AKILALCDEFGIKKPIFHSHNSAALERASEIKDEMVRVGIAQYG-YAQFNGSLNLKPVLS 227

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             A+ +  R   +G+ V YG +     D  +A   +GY DG                 LG
Sbjct: 228 LWAKRVSRRVLKSGQSVGYGAKFIAKDDINVATYDLGYGDGLLR-----------YNGLG 276

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIE-VGDYIQIFGPDIKLDDVALASGTTNYD 356
                 G +  ILGKI+MD          S +  G+++ +F      +  A   GT NYD
Sbjct: 277 ELRLANGEL--ILGKISMDSF--------SCKDSGEWVCVF---EDANVWAEFFGTINYD 323

Query: 357 LLVRIGTRYAKFY 369
           +LV++     + +
Sbjct: 324 ILVKLSPNITRKF 336


>gi|213581079|ref|ZP_03362905.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
          Length = 240

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 98/243 (40%), Gaps = 11/243 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             ++V++G NRLG   + A          +      ++SH A AD P     +++     
Sbjct: 120 IYVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQADHPEGIGEAMRRIALA 179

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINK----SHPMQTVVTAE 239
           T          SL++S+  L  P  H+   RPGI LYG +            ++ V+T  
Sbjct: 180 TEGLQCA---YSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236

Query: 240 ARI 242
           + I
Sbjct: 237 SEI 239


>gi|256027408|ref|ZP_05441242.1| alanine racemase, biosynthetic [Fusobacterium sp. D11]
 gi|289765372|ref|ZP_06524750.1| alanine racemase [Fusobacterium sp. D11]
 gi|289716927|gb|EFD80939.1| alanine racemase [Fusobacterium sp. D11]
          Length = 226

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 8/222 (3%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++ID   LK N   +  ++ N     VVK NAYGLG  +I   L   G+  F V ++
Sbjct: 2   RTWVEIDKENLKYNVLKLKEIANNREVLGVVKANAYGLGSVEITKILQEIGINFFGVANL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           EE ++L+    + +I +L      +        +   ISS+ Q      L++  ++    
Sbjct: 62  EEAIELQEAGIKDKILILGASFEDELIEATKRGVHVAISSMGQ---LQFLVNNKLNPNIH 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP---SSHVNSVQLERF 182
           L+ DTG  RLG  + EA        N  L  L  I SHL+ +D     + +    Q+E+F
Sbjct: 119 LKFDTGMTRLGFEVDEAKKIIEFCKNNNL-NLVGIFSHLSDSDGNTVETKNFTLEQIEKF 177

Query: 183 RTLISHYKGIEASLASSS-GILLGPNYHFQLTRPGISLYGGT 223
           + +++        +++S+       +    L R GI +Y  T
Sbjct: 178 KKIVNSLNLKYIHISNSAGITNFHNDIVGNLVRMGIGMYSFT 219


>gi|167626729|ref|YP_001677229.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|167596730|gb|ABZ86728.1| Alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 351

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 74/363 (20%), Positives = 142/363 (39%), Gaps = 23/363 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ++I+   +K+N   +   + +++   +VK NAYG+G E I     N  V  + +  +EE 
Sbjct: 7   VEINSKLVKSNIEYLRNKNPHSKIMFIVKANAYGVGIENIYKV-TNNLVDAYGIARIEEY 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
             L+       I  L GI+          N+IP++ +   +  Y K      S    L  
Sbjct: 66  YVLKNLGCTKDIVFLSGIYAECFNFKIPKNVIPILGNELLIKDYIKYED-DKSKQVMLDF 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D G  R G    + +       +     + L        +       + +       ++ 
Sbjct: 125 DCGMGRFGFYRDDFIKHLDTLKSSGFSNIILFSHIPTGYNGYDK---AKKYINKILSLAE 181

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
              ++ + ++S   L   ++  +  R   ++ G   +  +   ++  ++ +A II IR  
Sbjct: 182 ETKLKYTFSNSPVSLFDTDFQQEYIRSSSAILGYDQEPKE---IKFSLSLKACIISIRDI 238

Query: 249 LAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP 308
             GE +SYG +    +++ +A+  IGYADG               +       IK    P
Sbjct: 239 PKGEYISYGNEYFCNKNTTVAILNIGYADGL-----------GCEIHHDSYLLIKATKCP 287

Query: 309 ILGKITMDMTMFDITDSL-SIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RY 365
           IL  I MD    DI+     +++ D I++F P+ + L+  A     T  + L ++   R 
Sbjct: 288 IL-SINMDYLYVDISAIKQQLKMLDMIELFSPNSLSLEQHASMYNITKDEALTKLNALRV 346

Query: 366 AKF 368
            K 
Sbjct: 347 RKI 349


>gi|317059312|ref|ZP_07923797.1| alanine racemase [Fusobacterium sp. 3_1_5R]
 gi|313684988|gb|EFS21823.1| alanine racemase [Fusobacterium sp. 3_1_5R]
          Length = 359

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 125/377 (33%), Gaps = 49/377 (12%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L+++  A+ +N + +           V+K NAYG G  ++A     AGV    V   EE 
Sbjct: 7   LEVNREAILHNINVLRKW-KRKDIIPVIKANAYGHGMLEMAKTCVQAGVTQVAVARYEEA 65

Query: 69  VKLRL------YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            K+         + +    +L     G   ++ D   + +  +  +    + L       
Sbjct: 66  KKILEDSYFQSLSKECSFQILIFESIGDFSLLDDFPRMDISINSLEELEKA-LEYHISPK 124

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              +++D  F R G+  ++   F      + L    +     + + +             
Sbjct: 125 KMQVKIDFSFGRNGIQEKDLPFFIKKVKEENLTFKGIFSHLFSSSYEDGLLCIKKFSSLV 184

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
           + +            S++      +    + R G+  YG  +       +Q     + +I
Sbjct: 185 QEMGKERFDRIHLQNSAASYNYDCDIVTDI-RVGMLTYGLQEPGYFHEELQRAFCLKGKI 243

Query: 243 ILIRKALAGELVSYGGQKKLTRD--SLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
             IR     + ++Y G++ +        A   IGYADG+                  G  
Sbjct: 244 DSIRCVENMKYLAYEGKEDVGMKFAKWAAKIKIGYADGF------------GKENENGSC 291

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF----------GPDIKLDDVALAS 350
            I+     I  ++TMD T  ++     ++VGD + +F          G +I         
Sbjct: 292 IIQRKEYRIA-EVTMDNTFLEV--DERVKVGDEVLLFYNPTKTKQETGKEI--------- 339

Query: 351 GTTNYDLLVRIGTRYAK 367
               ++ L  +  R  +
Sbjct: 340 ----HEHLTGLTNRLPR 352


>gi|307720266|ref|YP_003891406.1| Alanine racemase [Sulfurimonas autotrophica DSM 16294]
 gi|306978359|gb|ADN08394.1| Alanine racemase [Sulfurimonas autotrophica DSM 16294]
          Length = 339

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 69/374 (18%), Positives = 135/374 (36%), Gaps = 51/374 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              + ++     NN   +  L+    + A V+KDNAYG G  +IA      G+    V S
Sbjct: 1   MAYITLNKNHFFNNLTIIAKLTKAKDKIALVLKDNAYGHGLFEIATLAKEYGITKAVVRS 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            EE  ++          ++    P +                  +    ++     +   
Sbjct: 61  NEEAKEIENLF---EYILVLADTPKEASQKIRYT----------INDIRQIQKFAKNTKV 107

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+VDTG  R G+ + E  +       + L QL  + +H + AD+  +    +Q E F+ 
Sbjct: 108 ELKVDTGMCRNGIMMDELEEAFILCAQQGL-QLEAVFTHHSSADE-DNRYFDLQNENFKR 165

Query: 185 LISH---------YKGIEASLASSSGILLGPNYHFQLTRPGISLYGG--TDKINKSHPMQ 233
           +            +  +     +S+ +    ++   + R GI+ YG            +Q
Sbjct: 166 VKQDSQVLAKKYSFIPLRFHSFNSAALFRSNDFDEDMARVGIAAYGCLELPSSLHVKNLQ 225

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            V++  A+ +  R+   GE V YG   +      ++    GY DG+  + S         
Sbjct: 226 PVLSVYAQRLSSRRLQKGECVGYGAAFETAVTCNVSNYDFGYGDGFLRSCSHHYITPEGI 285

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
                          I G+I+MD + F +T+   + + D             +A  + T 
Sbjct: 286 --------------KIAGRISMDNSSF-LTNKEKLLIFD---------DARVIAKFADTI 321

Query: 354 NYDLLVRIGTRYAK 367
           +Y++L  +  +  +
Sbjct: 322 SYEILTALKEKIKR 335


>gi|152990104|ref|YP_001355826.1| alanine racemase [Nitratiruptor sp. SB155-2]
 gi|226711055|sp|A6Q1W0|ALR_NITSB RecName: Full=Alanine racemase
 gi|151421965|dbj|BAF69469.1| alanine racemase [Nitratiruptor sp. SB155-2]
          Length = 332

 Score =  133 bits (334), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 148/367 (40%), Gaps = 60/367 (16%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
            ALK+N  +++  +G + + AAV+KDNAYG G E  A  +   G++   V + EE +K+ 
Sbjct: 9   KALKHNLETVSKKAGGSDKIAAVLKDNAYGHGIEGFAKKISRLGIKKAVVRTYEEALKIA 68

Query: 73  LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGF 132
            + P   I      H                S    +     L          L++DTG 
Sbjct: 69  DFFPYILILSDTPRHD---------------SFHYAINDLDTLQVLEPGTKVHLKIDTGM 113

Query: 133 NRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGI 192
           +R G++L+E          K    L+ + +H   AD+ SS +   Q E+++T+  H   +
Sbjct: 114 HRNGIALEEIEK-AFELLQKNRAHLTGVFTHFRSADELSSELF-WQNEQWQTVKQHVIEL 171

Query: 193 --------EASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQTVVTAEARI 242
                       A++S  L          R GI+LYG T  D + +   ++ V +  A+ 
Sbjct: 172 IKKYNLQKPLFHAANSAALFRLGCEDDFARIGIALYGYTELDDLYEPPALEPVASLWAQK 231

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I  R+   G  V YGG  +   D +I+    GYADG       ++               
Sbjct: 232 IASRELKKGSRVGYGGVFEAREDMIISTYDAGYADGIFRFQKEIEDG------------- 278

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGD--YIQIFGPDIKLDDVALASGTTNYDLLVR 360
                 ILG+++MD  +           G+   I IF        +A   GT +Y+LLV+
Sbjct: 279 -----KILGRVSMDSILL---------EGEKKEICIFSD---AKKMARKLGTISYELLVK 321

Query: 361 IGTRYAK 367
           +    ++
Sbjct: 322 MPAHLSR 328


>gi|218661516|ref|ZP_03517446.1| alanine racemase protein [Rhizobium etli IE4771]
          Length = 130

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 13/140 (9%)

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
           M+ VV  +  ++  R   +G  + YGG     R + +A  A GYADG P +L        
Sbjct: 1   MEPVVRLDVAVVQTRTVPSGAKIGYGGAHVTRRQTRLATIAAGYADGLPRSLGDR----- 55

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALA 349
                 G  + KG  +PI+G+++MD T  DIT      + +G  +++ GP+  LDDVA  
Sbjct: 56  ------GAVYHKGIRLPIVGRVSMDSTTVDITALPEGALSLGSLVEVLGPNQTLDDVAGD 109

Query: 350 SGTTNYDLLVRIGTRYAKFY 369
           +GT +Y++L  +G RY + Y
Sbjct: 110 AGTISYEILTGLGDRYDRQY 129


>gi|223038883|ref|ZP_03609175.1| alanine racemase [Campylobacter rectus RM3267]
 gi|222879856|gb|EEF14945.1| alanine racemase [Campylobacter rectus RM3267]
          Length = 334

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 73/370 (19%), Positives = 133/370 (35%), Gaps = 45/370 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              L ++  A  NN   + A +G   R   V+KDNAYG G   +     N G++   V +
Sbjct: 1   MSELVLNRAAYINNLTKICAKAGGKDRVILVLKDNAYGHGATIVGREAANYGIKFCAVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E  +L     +  + + +    G+ +                +   S +         
Sbjct: 61  ETEAREL-EPFFEHILVLSHIPDGGESERFI-----------YAVNSLSLIAKFKKGARV 108

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VDT  +R G+++ EA      +      Q+    +H   A++ SS    VQ   F T
Sbjct: 109 HIAVDTLMHRNGVAVGEA-KAACEAALVHGLQICGAFTHFRSAEELSSDYF-VQRRNFDT 166

Query: 185 ------LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                  I   + +     +S+          +  R GI+ YG   + ++S  ++ V + 
Sbjct: 167 AKAVVREICGERDLVFHSHNSAATERFGELADECVRVGIAAYG-YAQFDESLELKRVASL 225

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            A  +  R    G+   YG +   + D  +A+  +GY DG    +   +   +       
Sbjct: 226 WAHKVSDRVLKKGQCAGYGAKFCASEDMRVAIYDLGYGDGLLRYVGEGELRTAS------ 279

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
                G    +LGK++MD              G+ I +F         A   GT +YD+L
Sbjct: 280 -----GQR--LLGKMSMDSFC-----CEDA--GEKICVFDD---ARVWAKFFGTISYDVL 322

Query: 359 VRIGTRYAKF 368
            ++     + 
Sbjct: 323 TKLSPSINRR 332


>gi|319938192|ref|ZP_08012590.1| alanine racemase [Coprobacillus sp. 29_1]
 gi|319806713|gb|EFW03362.1| alanine racemase [Coprobacillus sp. 29_1]
          Length = 260

 Score =  132 bits (332), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 111/240 (46%), Gaps = 3/240 (1%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA-GVQDFFVTSVEEGV 69
           I L  L++N +++          A++K NAYG G +++A  L +   +  F V +++E +
Sbjct: 17  IRLDYLQDNVNTLYQRV-QKPMMAIIKANAYGHGYQEVANVLKDHEHISMFGVATLKEAI 75

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            LR    +  I VL  I       + D ++   + S   +    +L          +++D
Sbjct: 76  DLRKLGIEQDILVLGAIPLKDLDFVIDYDITLTLFSKEYMEEIVELYHHEKPVKVHIKID 135

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERFRTLISH 188
           TG NR+GL  +   +    ++ K + Q+  + +H A ADDP  +     QL  F  ++  
Sbjct: 136 TGMNRIGLKTKTEFEDVLRNYPKDIFQIDGVFTHFATADDPLQNDAYENQLNMFYDIVGD 195

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
           ++       +S+ ++        L R GI++YG      +S  ++ V++  +R+++I+K 
Sbjct: 196 HQFRYIHCQNSASMMYHHEEKSNLARIGIAMYGVDPAGEESVHLKQVMSLYSRVVMIKKI 255


>gi|313902556|ref|ZP_07835956.1| alanine racemase [Thermaerobacter subterraneus DSM 13965]
 gi|313467122|gb|EFR62636.1| alanine racemase [Thermaerobacter subterraneus DSM 13965]
          Length = 511

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 117/359 (32%), Gaps = 28/359 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             R+++DL  L  N  ++   L    R  AVVK + YG+G E  A     AG       +
Sbjct: 50  RARIEVDLDVLAANLAAVRRFLRPGTRLLAVVKGDGYGVGAEMAARTFAAAGADALGTAT 109

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC---GVS 121
           +E  ++LR     A I V     P          L   +     L   S+       G  
Sbjct: 110 LESALRLRRSGITAPILVFQPPEPPLLDFWLREGLQATVHDAATLHALSQRAVALGVGRP 169

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               L+VD G  R GL+  +       + +    ++  + +HL  A  P   +  +    
Sbjct: 170 LAVHLEVDMGLGRGGLAPGQVAPLVAGAASLPGVRIEGLYTHLPTAARPRLALRLLDRFL 229

Query: 182 FRTLISHYKGIEASLASSSGILLG---PNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +G+   L   +   L    P     + R G  LYG   +  +   +     +
Sbjct: 230 RLVRDLEERGLRPPLVHCAESHLLVLAPYAQLDMVRVGNLLYGYAPRAARRAGLAVRPPS 289

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP------------------ 280
              + +     AG++            + +AV  +G ADG                    
Sbjct: 290 RLVVRVWAVHRAGDMTPGYRGGWARPGTPVAVLPVGLADGLRPAREARHWGDRMVILGRR 349

Query: 281 --LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
               L       + +   G +       VP+ G+  M+  +FD T    +  G  +++ 
Sbjct: 350 LLGALGARQVLGASTAPPGPRVRAGHREVPLRGEFMMNHCLFDATGLP-LAPGQEVELL 407


>gi|224438031|ref|ZP_03658970.1| alanine racemase [Helicobacter cinaedi CCUG 18818]
 gi|313144476|ref|ZP_07806669.1| alanine racemase [Helicobacter cinaedi CCUG 18818]
 gi|313129507|gb|EFR47124.1| alanine racemase [Helicobacter cinaedi CCUG 18818]
          Length = 348

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 85/385 (22%), Positives = 136/385 (35%), Gaps = 63/385 (16%)

Query: 6   FLRLKIDLTALKNNWHSMNAL-----SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
              + +D  A K+N + +++        N   AAV+KDNAYG G +++A      G++  
Sbjct: 1   MAEIILDSKAYKHNLNLIHSHINSHNKSNVEIAAVLKDNAYGHGLKEMATIAAEYGIKSV 60

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           FV +  E +++  + PQ   F  YG+  G         +               + +   
Sbjct: 61  FVKNYNEAIQIYKFFPQVTAF--YGMPQGDFAKNIAFVIHDEKH----------ISALPQ 108

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLE 180
                L+V+ G NR G+   E   F      KKL +L  + SH    DD  S     Q  
Sbjct: 109 GTKVELKVNVGMNRNGIEPSELESFIQAILQKKL-ELIGVFSHNGYGDDLDSVFFHTQ-S 166

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNY------------HFQLTRPGISLYGGTD---K 225
            F  L      +      +       +                L R GI  YG  D   +
Sbjct: 167 NFAKLKQEVLHLSQKYGFAPPRFHSLSTSGAIRVASEGGITDDLVRIGIGAYGYLDVSFE 226

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
              S  +Q V +  A  +  R    GE + Y G   L    +++   IGY DG+      
Sbjct: 227 NPISDKLQKVASLYADRVSTRFLDKGERIGYSGCTTLNSPQVVSTYDIGYGDGFFR---- 282

Query: 286 LDSEHSPSVFLGGKGFI-KGYMVPILGKITMD--MTMFDITDSLSIEVGDYIQIFGPDIK 342
                   V    K +I  G  + IL + +MD      D            I +F     
Sbjct: 283 --------VNENHKVYIANG--LQILPRSSMDCFSCFCDEP---------RICVFND--- 320

Query: 343 LDDVALASGTTNYDLLVRIGTRYAK 367
           +  +A A GT +Y++L  +     +
Sbjct: 321 VTHLAKAFGTISYEILTHLSPSIKR 345


>gi|109290351|gb|ABG29384.1| alanine racemase [Mitsuokella multacida]
          Length = 150

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 2/129 (1%)

Query: 5   EFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
                +IDL AL++N+  +   + G A+  AVVK +AYG G   +A     AG     V 
Sbjct: 22  RAAWAEIDLRALRHNYEEIKKNIRGGAKLCAVVKADAYGHGALAVARVAVEAGASYLAVA 81

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
           ++ E ++LR       I +L  + P + + I D ++  V+  +P     S+         
Sbjct: 82  TLGEAIELREAGFTTPILLLGLVLPDEARDIVDYDVTQVVCELPLAEAISREAVRQHKVA 141

Query: 123 PYALQVDTG 131
              L+V+TG
Sbjct: 142 KVHLKVETG 150


>gi|58039648|ref|YP_191612.1| alanine racemase, C-terminus [Gluconobacter oxydans 621H]
 gi|58002062|gb|AAW60956.1| Alanine racemase, C-terminus [Gluconobacter oxydans 621H]
          Length = 166

 Score =  129 bits (325), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)

Query: 224 DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                +     VV  +A ++ IR+ L GE V YG   +  R   IA  A+GYADG+    
Sbjct: 19  PITKSAEEPSPVVRLQAHVLQIREILPGEGVGYGLTYRPERVRRIATVAVGYADGFSRHG 78

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG-DY-IQIFGPDI 341
           +G            G  + +   +PILG+++MD  + DI+D    ++G D  + + GP  
Sbjct: 79  AGQ-----------GCAWFEDIRLPILGRVSMDSLIVDISDVPEGKLGPDMMVDLIGPRR 127

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            +DDVA A+GT  Y++L  +G R+ + Y
Sbjct: 128 SVDDVAEAAGTIGYEVLTSLGHRFHREY 155


>gi|260890257|ref|ZP_05901520.1| alanine racemase [Leptotrichia hofstadii F0254]
 gi|260859877|gb|EEX74377.1| alanine racemase [Leptotrichia hofstadii F0254]
          Length = 300

 Score =  129 bits (324), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 68/305 (22%), Positives = 124/305 (40%), Gaps = 33/305 (10%)

Query: 81  FVLYGIHPGQEKIIFDTNLIPVISSVPQ---LTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
             L  I P   K + + N+   I +  Q                    ++V++G NRLG 
Sbjct: 1   MALNYIEPKNLKYVIENNVEFTIFNFSQLSDYLKILDKSFENRVLKIHIKVNSGMNRLGF 60

Query: 138 SLQEALDFTHNSFNKKLGQLSLIISHLAC----ADDPSSHVNSVQLERFRTLIS----HY 189
           +  E L+        ++   +  +  ++     +D  +      Q+E++  ++     + 
Sbjct: 61  NENEILELIEKIKKHEINSKNNKLEIISIFSHISDAENQIETEKQVEKYENILKIFDKNN 120

Query: 190 KGIEASLASSSGIL--LGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
              +     +S +L   G  Y++   R G++LYG    ++    +  V+T +++II IR 
Sbjct: 121 VKYQYKHLQASPLLFKYGQKYNYDFARVGMALYGMEP-LSYDVGLLDVITVKSQIINIRN 179

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMV 307
               + +SYG +  + RDS I + +IGYA G+   +   +              I     
Sbjct: 180 VKKNDKISYGSKGIVNRDSKIGIVSIGYAHGFQKQIENSEE---------AYVLINEKKA 230

Query: 308 PILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----------IKLDDVALASGTTNYDL 357
            I+G+I MDM   D+TD  ++EV D + I G            I L  VA  +GT   D+
Sbjct: 231 KIVGEICMDMIFIDLTDIENVEVNDEVVIIGSQKNVENEITEKITLRQVAKWAGTIQDDV 290

Query: 358 LVRIG 362
           L +  
Sbjct: 291 LTKFS 295


>gi|268679013|ref|YP_003303444.1| alanine racemase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617044|gb|ACZ11409.1| alanine racemase [Sulfurospirillum deleyianum DSM 6946]
          Length = 342

 Score =  129 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 74/373 (19%), Positives = 135/373 (36%), Gaps = 49/373 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           + ++   L +N   ++  +G   R  AV+KDNAYG G  ++A      G++   V +VEE
Sbjct: 4   ITLNKANLFHNLALLSTKAGGKERVMAVLKDNAYGHGLREMAQLCCEFGIKKAAVKNVEE 63

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
              +     +  I V        +++  +     +  +         L          L 
Sbjct: 64  AGVIADLFEEVLILV--------DQVPLEPLAPNLSFAAHSCEMLEALREGS---SIHLS 112

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT--- 184
           +DTG +R G+   E          K+L     + +H   AD+ S+     Q   F     
Sbjct: 113 IDTGMHRNGIKEHEIDRAMALILKKRL-VFKGVFTHFRSADELSTAFF-WQRSLFERAKQ 170

Query: 185 -----LISHYKGIEASLASSSGILLGPNYHFQ--LTRPGISLYGGT--DKINKSHPMQTV 235
                +++H+    A  + +S  LL  N        R GI++YG        K++ ++ V
Sbjct: 171 RIKAFVLAHHLPEVAFHSCNSAGLLRTNSLGDDAYARVGIAMYGYNTLHPSFKAYELKPV 230

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   A  +  R    GE V YGG  +   D LI+   IGY DG+           +    
Sbjct: 231 LALWAEKLSTRILKRGERVGYGGVYEAPCDELISTYDIGYGDGFFRFDGIASLAMADGRL 290

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
                          G+++MD    +  D+        + +F  +     +A    T  Y
Sbjct: 291 SK-------------GRMSMDSFCLE-GDAP------KVCMF-ENATA--LAERFQTICY 327

Query: 356 DLLVRIGTRYAKF 368
           ++  ++     + 
Sbjct: 328 EIPTKLSPSLKRI 340


>gi|257458910|ref|ZP_05624031.1| alanine racemase [Campylobacter gracilis RM3268]
 gi|257443707|gb|EEV18829.1| alanine racemase [Campylobacter gracilis RM3268]
          Length = 337

 Score =  129 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 72/374 (19%), Positives = 125/374 (33%), Gaps = 48/374 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVT 63
              + +D  A  +N   + A  G A R   V KDN+YG GC          G V+   VT
Sbjct: 1   MSEIILDRAAYAHNLAQIAAKVGGAERVFLVAKDNSYGHGCRLCCEEAAKLGFVR--AVT 58

Query: 64  SVE-EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
               E  ++     +    VL  I  G E   F             +   S         
Sbjct: 59  RSATEAAQIADLFDEI--LVLSHIPGGDEDERFCY----------AVNDLSYFARLKRGL 106

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ---- 178
              +  DT  +R G++  E  +                    A  +         Q    
Sbjct: 107 KIYIAADTAMHRNGIAASELDEALRLCKQGGFKLCGFFTHFRASDELSGDFFAQRQNFIE 166

Query: 179 ---LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
              L R +   + +  ++   ++S+ I     +  +  R G++ +G   + ++S  ++ V
Sbjct: 167 FKRLARQKAAAAGFGNLKFHSSNSAAIERSAGFEDEYVRVGMAQFG-YPQFDESLNLRPV 225

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           +   A +I  R    GE V YG + +   D  I    +GYADG                 
Sbjct: 226 LKLYADLISSRVLKKGERVGYGAKFEAPHDMRIGTYDLGYADGLFR-----------YDG 274

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNY 355
            G      G    +LGK++MD    +         G+ + +          A   GT  Y
Sbjct: 275 EGELALASGQK--MLGKMSMDSFCAEFG-------GEQVCVLDD---ARAWAKHFGTIEY 322

Query: 356 DLLVRIGTRYAKFY 369
           ++LV++ +   + +
Sbjct: 323 EILVKLNSNIPRRF 336


>gi|213026955|ref|ZP_03341402.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
          Length = 174

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/187 (27%), Positives = 80/187 (42%), Gaps = 13/187 (6%)

Query: 170 PSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
           P   +N  Q    +     +     SLA+S G+ L P +   L RPG++L+G   +   S
Sbjct: 1   PDHALNVYQHTLLQQAKKAFPTSRYSLANSCGMFLHPAWREDLCRPGVALFGVA-QPWFS 59

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
            P++   T    I+ ++    G  + YG     TR   IA  + GYADG P  L      
Sbjct: 60  TPLKPAFTLTLTILRVQDVPVGTPIGYGSTVTTTRPLRIATVSAGYADGIPRNL------ 113

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALA 349
                        +G  +P+LG++ MD  M D +  +    GD ++  G    L++VA A
Sbjct: 114 -----RPPAGVCWRGVRLPVLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAA 167

Query: 350 SGTTNYD 356
             T  Y+
Sbjct: 168 CDTIPYE 174


>gi|302543291|ref|ZP_07295633.1| alanine racemase [Streptomyces hygroscopicus ATCC 53653]
 gi|302460909|gb|EFL24002.1| alanine racemase [Streptomyces himastatinicus ATCC 53653]
          Length = 252

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 4/191 (2%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            +    R  +DLTAL++N  ++ A +  A   AVVK + YG G    A A   AG     
Sbjct: 6   ETPMRARAVVDLTALRDNVRALRAAAPTAELMAVVKSDGYGHGAIPCARAARAAGAGWLG 65

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGV 120
             + EE + LR    Q R+        G  +   + ++    S V       +   +CG 
Sbjct: 66  TATPEEALALRAAGDQGRLMCWLWTPGGPWRQAIEADIDVSASGVWALREAVAAARACGR 125

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI---ISHLACADDPSSHVNSV 177
           +    L+ DTG  R G    +  +    +   +      +    SH ACAD+P     + 
Sbjct: 126 TARVQLKADTGLGRNGCPPADWPELVAEALAAEAEGTVKVTGLWSHFACADEPGHPSIAA 185

Query: 178 QLERFRTLISH 188
           QL  FR L+  
Sbjct: 186 QLTVFRELLDQ 196


>gi|313683296|ref|YP_004061034.1| alanine racemase [Sulfuricurvum kujiense DSM 16994]
 gi|313156156|gb|ADR34834.1| alanine racemase [Sulfuricurvum kujiense DSM 16994]
          Length = 338

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 76/371 (20%), Positives = 128/371 (34%), Gaps = 52/371 (14%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTSVE- 66
           +K+   AL +N   +    G     AVV KDNAYG G   IA      GV+   V  +E 
Sbjct: 4   IKLSRKALIHNLDIIAHQVGGKDKIAVVLKDNAYGHGAVLIAQTASEYGVKQ-AVVRLER 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  ++  Y     I                            +    ++          L
Sbjct: 63  EAEEIVRYFDNVLILGQKPTQ-------------VHPHFSYAINSLEEIAQYPSGARVEL 109

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL- 185
           ++DTG +R G+  ++  +       ++      ++SH   AD  SS     Q + F    
Sbjct: 110 KIDTGMHRNGVFPEQLEE-AFEKIAQRGLICVGLMSHFRAADTLSSEWF-WQRKIFDATK 167

Query: 186 -------ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTVV 236
                    +   +   +++S+G          + R GI+LYG  +     +   +Q+V+
Sbjct: 168 IRASALAKKYGWSLRFHISNSAGAFRSAECSDDMVRVGIALYGCLEMDKTLEQPELQSVL 227

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           +     I  R   AGE V Y G  +   D +I+   +GYA+G     S            
Sbjct: 228 SLWGDKIATRVLKAGERVGYNGIYEAQSDEVISTYDLGYANGLDRLASNRYVTPEGIELR 287

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
                         G+I+MD   F   D+  + + D           +D A   GT  Y+
Sbjct: 288 --------------GRISMDSASF-AGDAEQLMIFD---------NANDYARIVGTIGYE 323

Query: 357 LLVRIGTRYAK 367
           +L  +     +
Sbjct: 324 ILACLDKDLKR 334


>gi|325526091|gb|EGD03753.1| alanine racemase [Burkholderia sp. TJI49]
          Length = 117

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 11/105 (10%)

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
             R   I V A GYADGYP                G    + G M  ++G+++MDM   D
Sbjct: 2   ADRPMRIGVVACGYADGYPRHA-----------PTGTPIAVDGVMTRVVGRVSMDMLTVD 50

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           +T   +  +G  ++++G  +K+DDVA ASGT  Y+L+  +  R  
Sbjct: 51  LTPCPNAGIGSSVELWGDQVKVDDVAEASGTIGYELMCALARRVP 95


>gi|325273197|ref|ZP_08139484.1| alanine racemase [Pseudomonas sp. TJI-51]
 gi|324101674|gb|EGB99233.1| alanine racemase [Pseudomonas sp. TJI-51]
          Length = 113

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              R  IDL AL++N+     L+G A+  AV+K +AYG G  + A AL       F V  
Sbjct: 2   RPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAE-ADGFAVAC 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPG-QEKIIFDTNLIPVISSVPQLTFYS 113
           +EE ++LR    +A + +L G     +  +I + +L  V+ S+ QL    
Sbjct: 60  IEEALELRGAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIE 109


>gi|168210753|ref|ZP_02636378.1| alanine racemase family protein [Clostridium perfringens B str.
           ATCC 3626]
 gi|170711187|gb|EDT23369.1| alanine racemase family protein [Clostridium perfringens B str.
           ATCC 3626]
          Length = 350

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 120/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG ++IA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKEIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKPNKLDSFIERIKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  YK     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYKDKVRIIHCMASSAIVNDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|18310043|ref|NP_561977.1| alanine racemase [Clostridium perfringens str. 13]
 gi|18144722|dbj|BAB80767.1| probable alanine racemase [Clostridium perfringens str. 13]
          Length = 350

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 120/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG ++IA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKEIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKPNKLDSFIERVKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  YK     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYKDKVRIIHCMASSAVVNDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|110799046|ref|YP_695763.1| alanine racemase family protein [Clostridium perfringens ATCC
           13124]
 gi|182626219|ref|ZP_02953977.1| alanine racemase family protein [Clostridium perfringens D str.
           JGS1721]
 gi|110673693|gb|ABG82680.1| alanine racemase family protein [Clostridium perfringens ATCC
           13124]
 gi|177908483|gb|EDT71016.1| alanine racemase family protein [Clostridium perfringens D str.
           JGS1721]
          Length = 350

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 120/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG +KIA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKKIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKPNKLDSFIERIKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  YK     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYKDKVRIIHCMASSAIVNDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|168217469|ref|ZP_02643094.1| alanine racemase family protein [Clostridium perfringens NCTC 8239]
 gi|182380489|gb|EDT77968.1| alanine racemase family protein [Clostridium perfringens NCTC 8239]
          Length = 350

 Score =  124 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 120/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG +KIA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKKIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKPNKLDSFIERVKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  YK     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYKDKVRIIHCMASSAIVNDQLKKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|10802761|gb|AAG23602.1|AF244653_1 alanine racemase [Carboxydothermus hydrogenoformans]
          Length = 232

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 20/234 (8%)

Query: 110 TFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD 169
            +  +L     +  Y L++DTG  R+G   +E           K  +   + +H A AD+
Sbjct: 11  AYQERLERLKKTLFYHLKIDTGMGRIGFWYEELEK-IEEVLKLKNLEAEGVYTHFARADE 69

Query: 170 PSSHVNSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
                + +Q+ERF  ++ H K           A+S+ I+  P  H+ L RPGI LYG   
Sbjct: 70  QDLSFSKLQIERFNIVLKHLKAKGIEVKYRHAANSAAIMRLPEAHYDLVRPGIMLYGEYP 129

Query: 225 KINKS---HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
             +       ++  +T +AR+  ++K  AG  VSYG     ++ +LI    +GYADGY  
Sbjct: 130 SRDVPRELAHLKPALTLKARVSQVKKVPAGFTVSYGSTYVTSKATLIVSLPLGYADGYFR 189

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQ 335
            LS             G   I G    I G++ MD  M    ++  +  GD   
Sbjct: 190 RLSNR-----------GVVLINGKRWSITGRVCMDQLMVRWDETERVLPGDEAV 232


>gi|237753177|ref|ZP_04583657.1| alanine racemase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375444|gb|EEO25535.1| alanine racemase [Helicobacter winghamensis ATCC BAA-430]
          Length = 360

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 64/386 (16%), Positives = 120/386 (31%), Gaps = 53/386 (13%)

Query: 6   FLRLKIDLTALKNNWHSM-NALSGNAR------TAAVVKDNAYGLGCEKIAPALYNAGVQ 58
              L+I      +N   +  A++   +       A V+KDNAYG G  +IA      G++
Sbjct: 1   MPYLEISKKNFFHNHQMIAQAITPKEKKGIKGEIAIVLKDNAYGHGIMEIASLAKEVGIK 60

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
             FV +++E + ++ +     I     +                  +    +        
Sbjct: 61  TAFVKNLQEALSIKTFFDNIAILYPNSLPNKNALESALKIPSISFCTPSLESLQEYPSKT 120

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +       VD+G +R G+   +  D       + L    +   +    D   +    VQ
Sbjct: 121 NIELK----VDSGMHRNGIDKTKLRDAFELITTRNLNLKGVFTHNGYGDD--LNSAFYVQ 174

Query: 179 LERFRTLISHYKGIEASLASSSGILLG-----------------PNYHFQLTRPGISLYG 221
              F  +      +                                    L R GI+ YG
Sbjct: 175 DMEFLEIKKEALKLCEHFKIPRPKFHSLSSSGALRASNFNASLPKELQDDLFRIGIAFYG 234

Query: 222 GTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL 281
                  +  ++ + +  A  I   K   G  + Y G   L  D +++   IGY DG   
Sbjct: 235 YNCSSPNTLKLKPIASLFANKISTLKLKKGTSIGYSGVSMLETDGIVSTYDIGYGDGLFR 294

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI 341
              G++   +                 IL + +MD    + +D+ S      + IF    
Sbjct: 295 VREGMELYTTEG-------------YRILPRASMDCISIE-SDTSS------VCIFND-- 332

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAK 367
            +   A +  T  Y++LV +     +
Sbjct: 333 -VSAFAKSFNTIPYEILVHLHAYIPR 357


>gi|148557035|ref|YP_001264617.1| alanine racemase domain-containing protein [Sphingomonas wittichii
           RW1]
 gi|148502225|gb|ABQ70479.1| alanine racemase domain protein [Sphingomonas wittichii RW1]
          Length = 384

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 126/350 (36%), Gaps = 26/350 (7%)

Query: 12  DLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           D  A   N   +  L     +     K + YG+G E+I      AGV  F + + EE ++
Sbjct: 26  DERAFHANVEQVRRLLPPGTKIYQCAKGDGYGVGVERIVCLGVRAGVDGFCLGTPEEALR 85

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
            +       + +  G  P     + +  +I  ISSV        L+  G +     ++D 
Sbjct: 86  AKCVAAGRPVLLFAGCDPAALGEMVEAGIIVSISSV---EGCEALLRSGATGDVFFKLDC 142

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH-- 188
           GF R GL+  +          +   +     SH     D          +R   LI    
Sbjct: 143 GFRRYGLNEPDLRTVLARVRRQSSVRCIGAYSHFGSRADEIVDGGLPLFDRLTRLIEDAV 202

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKA 248
            + IE  +ASS+ IL  P        PG  LYG      +  P Q +V   +  +L    
Sbjct: 203 QRPIETMVASSTLILQRPGLGHSAVDPGRLLYGMMAAGPEMPPFQPIVPRISSRLLQVTP 262

Query: 249 LAGE---LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
                   V Y  +  +       V  +G+ DG              +    G+  I+G 
Sbjct: 263 FDEARLLTVGYADKTAIPAGGATGVFPLGWIDGLS------------AHRGFGEVLIRGT 310

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASG 351
            + ++ + T+  ++ +++    + VGD + + G      I L+ +A A G
Sbjct: 311 RLSVVAR-TLQHSIVNLSGLSDVRVGDEVVLVGAQGDEQIGLEAMASAQG 359


>gi|319955971|ref|YP_004167234.1| alanine racemase [Nitratifractor salsuginis DSM 16511]
 gi|319418375|gb|ADV45485.1| alanine racemase [Nitratifractor salsuginis DSM 16511]
          Length = 335

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 73/371 (19%), Positives = 134/371 (36%), Gaps = 47/371 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVV-KDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              + ID     +N + +   +G+    AVV KDNAYG G   +     + G+++  V +
Sbjct: 1   MAYILIDRGNFYHNLNQLALKAGSKDRLAVVLKDNAYGHGLRLMGELSRDYGIREAVVVT 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            +E  ++        +         +             S +  L +    +   +    
Sbjct: 61  NDEADQISDLFDHILVLGDSPRPSSRCSYAV--------SEIGLLRWIEPGVLIELKV-- 110

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
               DTG +R G+   E L+       K+  +L  +I+H   AD+ +S     Q +RF  
Sbjct: 111 ----DTGMHRNGIEP-ERLEEALEIIRKRKLRLFGVITHYRSADELTSEYF-WQKKRFDE 164

Query: 185 LISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQTVVT 237
           +                 +S+ +L   N+   + R GI++YG     K  +   ++ V++
Sbjct: 165 VKKRVIDAGFSETRFHSHNSAALLRCRNFDEDIARVGIAIYGYNTLPKGFEGVELKPVLS 224

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             AR    R+   G  + YGG+    R+  ++   +GY DG+P           P     
Sbjct: 225 LWARRASTRRLQEGARIGYGGEFTADREMPVSTYDLGYGDGWPRG-----RASEPYRTAE 279

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
           GK         ILG+++MD    +          D I +          A   GT  Y++
Sbjct: 280 GKA--------ILGRVSMDFISVE-------GEADRICVM---EDARRAARHFGTICYEM 321

Query: 358 LVRIGTRYAKF 368
              +     + 
Sbjct: 322 TTALMPTIPRR 332


>gi|213582016|ref|ZP_03363842.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
          Length = 113

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 58/120 (48%), Gaps = 11/120 (9%)

Query: 247 KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
              AGE V YGG   +T++  I + A GYADGYP                G    + G  
Sbjct: 1   TLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHA-----------PTGTPVLVDGIR 49

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
              +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y LL  +  R  
Sbjct: 50  TRTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYGLLCAVAPRVP 109


>gi|168207987|ref|ZP_02633992.1| alanine racemase family protein [Clostridium perfringens E str.
           JGS1987]
 gi|170660702|gb|EDT13385.1| alanine racemase family protein [Clostridium perfringens E str.
           JGS1987]
          Length = 350

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 120/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG ++IA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKEIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKSNKLDSFIERVKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  Y+     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYRDKVRIIHCMASSAIVNDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|218677912|ref|ZP_03525809.1| putative alanine racemase [Rhizobium etli CIAT 894]
          Length = 165

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 81/160 (50%), Positives = 110/160 (68%)

Query: 168 DDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           D+PS  +N  QLE FR + + Y+GI++SLA+S+GI LG +YHF LTRPGI+LYGG     
Sbjct: 1   DEPSHAMNRRQLESFRRVSAAYEGIDSSLAASAGIFLGEDYHFDLTRPGIALYGGEAVCG 60

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
            ++PM+ V TA+ARII +R   AGE VSYG   +L RDS +A+ ++GYADGY  + S   
Sbjct: 61  MANPMRPVATAQARIIQVRNVEAGETVSYGRALQLRRDSRLAIVSVGYADGYMRSQSSGG 120

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS 327
                 V  GG+GFI G+ VP+ G+ITMD+T+FD+TD   
Sbjct: 121 VPLRQVVPQGGEGFIAGHKVPVAGRITMDLTIFDVTDLPE 160


>gi|317064205|ref|ZP_07928690.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|313689881|gb|EFS26716.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 353

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 133/368 (36%), Gaps = 19/368 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  +++ I    L  N   +       +   V+K NAYG   E ++  LY+ G ++F
Sbjct: 1   MAVNS-IKMLISEENLIQNIKYLEKKYAK-KILPVLKANAYGHSIEMVSEILYDNGYREF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  + E  K+          +L     G+E      +   +  S   L    + +  G+
Sbjct: 59  AVARLNEAEKILQNKKVTDSRILVFESIGREFFDVVKSNNTIEISANTLAELKEFIENGI 118

Query: 121 -SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D GF R G+  ++  +       K L    +     A   D  + +     
Sbjct: 119 SPDRIQLKIDFGFGRNGIIQEDIENLKKYIEKKNLSFKGIYSHLYAVEYDEGAELIEKFT 178

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E  + L      +     S   +L G        RPGI +YG  ++      ++ V   E
Sbjct: 179 ETVKYLGKERFQMIHIQNSVGILLYGNCDMMTHLRPGIYIYGLQEEGFFQEGLKQVFKLE 238

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +I  +R     + ++Y  +  L+ +     A I    G   + +               
Sbjct: 239 GKIAGVRDVSKSKYLAYNLKTTLSENDFNYAAKIKIGYGEGFSKAN----------EKSC 288

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G    IL  +TMD T  ++    SI+ GD++ ++     +  V   +G    ++L 
Sbjct: 289 CLINGKSYKIL-LVTMDNTFIEV--DESIKEGDHVALYSD---VSKVREDTGLHICEVLP 342

Query: 360 RIGTRYAK 367
            I +R  +
Sbjct: 343 VISSRIVR 350


>gi|257469979|ref|ZP_05634071.1| alanine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 357

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 133/368 (36%), Gaps = 19/368 (5%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  +++ I    L  N   +       +   V+K NAYG   E ++  LY+ G ++F
Sbjct: 5   MAVNS-IKMLISEENLIQNIKYLEKKYAK-KILPVLKANAYGHSIEMVSEILYDNGYREF 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V  + E  K+          +L     G+E      +   +  S   L    + +  G+
Sbjct: 63  AVARLNEAEKILQNKKVTDSRILVFESIGREFFDVVKSNNTIEISANTLAELKEFIENGI 122

Query: 121 -SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
                 L++D GF R G+  ++  +       K L    +     A   D  + +     
Sbjct: 123 SPDRIQLKIDFGFGRNGIIQEDIENLKKYIEKKNLSFKGIYSHLYAVEYDEGAELIEKFT 182

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           E  + L      +     S   +L G        RPGI +YG  ++      ++ V   E
Sbjct: 183 ETVKYLGKERFQMIHIQNSVGILLYGNCDMMTHLRPGIYIYGLQEEGFFQEGLKQVFKLE 242

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +I  +R     + ++Y  +  L+ +     A I    G   + +               
Sbjct: 243 GKIAGVRDVSKSKYLAYNLKTTLSENDFNYAAKIKIGYGEGFSKAN----------EKSC 292

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
             I G    IL  +TMD T  ++    SI+ GD++ ++     +  V   +G    ++L 
Sbjct: 293 CLINGKSYKIL-LVTMDNTFIEV--DESIKEGDHVALYSD---VSKVREDTGLHICEVLP 346

Query: 360 RIGTRYAK 367
            I +R  +
Sbjct: 347 VISSRIVR 354


>gi|154148940|ref|YP_001406018.1| alanine racemase [Campylobacter hominis ATCC BAA-381]
 gi|153804949|gb|ABS51956.1| alanine racemase [Campylobacter hominis ATCC BAA-381]
          Length = 336

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 72/368 (19%), Positives = 124/368 (33%), Gaps = 47/368 (12%)

Query: 10  KI--DLTALKNNWHSM-NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +I  D +A  +N   +   L G  +   + KDN+YG G  +IA      G++   V S  
Sbjct: 3   EILLDKSAFLSNLTKISQKLGGKEKIMLIAKDNSYGHGSAQIAGIAREFGIKKAVVKSEM 62

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  ++  +  +    +L  I  G EK  F   +  +                       +
Sbjct: 63  EAEQIAEFYDEI--LILSHIPTGCEKPDFSYAINDMSH----------FSKIKNGSKVHI 110

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN--SVQLERFRT 184
            VDT  +R G+  ++  D         L       +H   +D+  S           F+ 
Sbjct: 111 SVDTLMHRNGILPEQLDDALRLVRENHLNLG-GFYTHFRASDEIGSDFFVQRENWRNFKI 169

Query: 185 LISHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
                       +     +S+ I     +     R G++ +G          ++ V++  
Sbjct: 170 SAQKKCKNLGFNVVFHSCNSAAIERSEEFSDDFARVGMAQFGYFQFSEI-LGLKPVLSLY 228

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           A  I  R    GE V YGG  +   D LI+   +GY DG        D     +      
Sbjct: 229 ADRISSRLLKKGERVGYGGVFEAPCDILISTYDLGYGDGLLRYNGKGDLRLGNNE----- 283

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
                    ILGK++MD          S + G+ + +F         A    T  Y++LV
Sbjct: 284 --------KILGKMSMDSFA-------SKDAGERVCVFDD---ARVWARFFNTIEYEILV 325

Query: 360 RIGTRYAK 367
           ++     +
Sbjct: 326 KLSANIKR 333


>gi|254458882|ref|ZP_05072306.1| alanine racemase [Campylobacterales bacterium GD 1]
 gi|207084648|gb|EDZ61936.1| alanine racemase [Campylobacterales bacterium GD 1]
          Length = 333

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 128/346 (36%), Gaps = 51/346 (14%)

Query: 31  RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
           + A V+KDNAYG G  ++A      GV+   V S +E   +                   
Sbjct: 27  KIAIVLKDNAYGHGISEMASLAKEYGVKKAVVRSNDEAKSIEE-------------FFEY 73

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
             ++ D    P       +     +          L+VDTG +R G+S+ E L       
Sbjct: 74  ILVLGDIPKEPSSKMRYTINDIKSISKFPKETLVELKVDTGMHRNGISMSE-LHDAFMQI 132

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH---------YKGIEASLASSSG 201
            +    L  + +H   +D+ +S     Q + F+ +            +  +    A+S+ 
Sbjct: 133 KEAGLILEAVFTHHRSSDELTSEWF-WQNDNFKKVKQEAAYLAEEFGFGSLRFHSANSAS 191

Query: 202 ILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKK 261
           +    ++   + R GI+ YG  +          V++  A  I  R+   G+ V YGG   
Sbjct: 192 LFRTDSFDEDMARVGIASYGCLEGYE---GFAPVLSLYADKISSREVKRGQRVGYGGTFV 248

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
              + +++    GY DG+    S                   G  V  +G+I+MD + F 
Sbjct: 249 AKDNCVVSNYDFGYGDGFLRNSSNE------------FVTSNG--VEQVGRISMDNSSF- 293

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           IT+  ++       IF   I     A ++GT +Y++L  +     +
Sbjct: 294 ITNEENL------LIFNNAIDA---AKSAGTISYEILTSLKASLKR 330


>gi|307243449|ref|ZP_07525605.1| putative alanine racemase [Peptostreptococcus stomatis DSM 17678]
 gi|306493173|gb|EFM65170.1| putative alanine racemase [Peptostreptococcus stomatis DSM 17678]
          Length = 358

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 64/350 (18%), Positives = 122/350 (34%), Gaps = 36/350 (10%)

Query: 7   LRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            +L+IDL A+  N    +    G     AVVK+NAY  G E+     Y AGV+ F  TS+
Sbjct: 4   AKLRIDLGAIYKNATRVLKETDGG--LIAVVKNNAYNFGLERAVETFYKAGVRVFATTSL 61

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E +K+R         ++      +  ++    +   I+++    F    +       + 
Sbjct: 62  KECIKMRDLYEDIT--IISLNPAKEFDLLRKYRISTAIANL---DFVKNNLEDMKGISWQ 116

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR-- 183
           L+      R G   +E +    +        +  + +H + AD+        +       
Sbjct: 117 LEWAGSMRRSGCRSKEEMSEILSLARDNNIDIEGVWTHFSWADEFDQDKTYEREREIWLD 176

Query: 184 --TLISHYKGIEASLASSSGILLGPNYHFQLT--RPGISLYGGTDKINKSHPMQTVVTAE 239
                      +   A +S            +  R GI LYG          +   ++  
Sbjct: 177 ALAAAKRVHKFKFIHAQNSASFARDGLLEDHSHVRLGIYLYGCLPYRECPKKIDHAISLS 236

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           AR++ I     G+ + Y         + +AV  +GY DG   +              G  
Sbjct: 237 ARVLSIIHLDPGQSIGYCSSFVAKEPTDLAVINMGYGDGLLRS-----------RIRGHD 285

Query: 300 GFIKGYMVPILGKIT--MDMTM--FDITDSLSIEVGDYIQIFGPDIKLDD 345
             I     P+   ++  M  ++   D     ++ +GD +  +G DI + +
Sbjct: 286 LEINKRRYPL---VSLMMSHSVAIID----EAVTLGDEVYFYGHDIPVHE 328


>gi|213028189|ref|ZP_03342636.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
          Length = 185

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 4/187 (2%)

Query: 39  NAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN 98
           NAYG G  + A  L +     F V  +EE ++LR       I +L G     +       
Sbjct: 1   NAYGHGLLETARTLPD--ADAFGVARLEEALRLRAGGITQPILLLEGFFDAADLPTISAQ 58

Query: 99  LIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN-SFNKKLGQL 157
            +       +     + +         +++DTG +RLG+  +EA  F    +  K + Q 
Sbjct: 59  CLHTAVHNQEQLAALEAVELAEPVTVWMKLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQP 118

Query: 158 SLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGI 217
             I+SH A AD+P       QL+ F        G + S+A+S GILL P  HF   RPGI
Sbjct: 119 VNIVSHFARADEPECGATEHQLDIFNAFCQGKPG-QRSIAASGGILLWPQSHFDWARPGI 177

Query: 218 SLYGGTD 224
            LYG + 
Sbjct: 178 ILYGVSP 184


>gi|222151301|ref|YP_002560457.1| alanine racemase 2 [Macrococcus caseolyticus JCSC5402]
 gi|222120426|dbj|BAH17761.1| alanine racemase 2 [Macrococcus caseolyticus JCSC5402]
          Length = 360

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 79/350 (22%), Positives = 132/350 (37%), Gaps = 33/350 (9%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            R  +D T    N     ++  N    AVVK+NAY  G E    A   AG+  F  T++ 
Sbjct: 3   ARWTVDRTKFIENV---KSVIDNTPVMAVVKNNAYHYGLEFAIDAFLQAGITTFSTTNLN 59

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E + +R   P+A IF++  +         D     +  ++P L FY +  S        L
Sbjct: 60  EAILIRKIAPEATIFLMNPVT-----RFNDLRQYNIQMTLPSLAFYHRYQSELDGISVHL 114

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI----ISHLACADDPSSHVNSVQLERF 182
           + +   +R G    E +    +  N+    L +      +H   AD+       ++ E +
Sbjct: 115 EYENLLHRSGFKTFEEMKTVIDDNNQLPVHLQMNINGIWTHFGYADEFDVIEYEIEKESW 174

Query: 183 ---RTLISHYKGIEASLASSSGILLGPNYH--FQLTRPGISLYGGTDKINKSHP-MQTVV 236
                 IS Y   E   + +S   +           R GI LYG     +         +
Sbjct: 175 LKGLKWISRYHTFEMIHSQNSASFIRDKIFDEHTHVRIGIILYGSRPYASLDESVTHQSL 234

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T  A +I +R    GE   Y       +++ +AV  IGY DG   T S  D         
Sbjct: 235 TVSANVIQVRNISKGESAGYSFAFTAEKETKLAVVDIGYGDGILRTRSKHD--------- 285

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                IKG   PI   + M     ++ +++  E  D + ++  +I++D+ 
Sbjct: 286 ---CIIKGRRYPIR-ALMMSHMFVEVDNTVEAE--DEVILYSDEIRIDEF 329


>gi|32267015|ref|NP_861047.1| alanine racemase [Helicobacter hepaticus ATCC 51449]
 gi|32263067|gb|AAP78113.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 344

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 74/380 (19%), Positives = 133/380 (35%), Gaps = 57/380 (15%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
              + ID  + K+N + +++  G +   A V+KDNAYG G E+I+      G++  FV +
Sbjct: 1   MSEIIIDSQSYKHNLNLISSHIGTSTELAIVLKDNAYGHGLEQISTLAREYGIKSVFVKN 60

Query: 65  VEEGVKLRLYT--PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             E ++++       A   +  G  P     + +                  +       
Sbjct: 61  YAEAMQIKDDFPCITALYGMPQGTFPPHIAFVINHK--------------EHISILPKGT 106

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLER 181
              L+V+ G NR G+   E  +F     ++ L  + +   +    D D        +   
Sbjct: 107 NVELKVNAGMNRNGIQASEISEFVELILHRGLNLIGVFSHNGYGDDIDEEFERTQERFAL 166

Query: 182 FRTLISH-----YKGIEASLASSSG----ILLGPNYHFQLTRPGISLYGGTD---KINKS 229
            +  I          +    + SS       +  N +  L R GI+ YG  D   +   S
Sbjct: 167 IKQEIKELAQKYGFPLPRFHSLSSSGAIREAMNNNINDDLVRIGIAAYGYLDVAFENPIS 226

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             ++ V    A  I  R       + Y G  K+   ++++   IGY DG+      +   
Sbjct: 227 AKLRKVAALYADRISTRVLPQNARIGYSGCTKMDSKNIVSTYDIGYGDGFFR----VSER 282

Query: 290 HSPSVFLGGKGFIKGYMVPILGKITMD--MTMFDITDSLSIEVGDYIQIFGPDIKLDDVA 347
           H      G           IL +++MD    M D            I +F      + +A
Sbjct: 283 HKVYTAKG---------YQILPRLSMDCFSCMCD---------ESRICVFDD---ANTIA 321

Query: 348 LASGTTNYDLLVRIGTRYAK 367
            A GT  Y++L  +     +
Sbjct: 322 QAFGTITYEILTHLSPFIKR 341


>gi|213417243|ref|ZP_03350387.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 108

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 11/117 (9%)

Query: 253 LVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGK 312
            V YGG     RD+ + V A+GY DGYP                G    + G  VPI+G+
Sbjct: 1   PVGYGGTWVSERDTRLGVVAMGYGDGYPRAA-----------PSGTPVLVNGREVPIVGR 49

Query: 313 ITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           + MDM   D+  +     GD + ++G  + ++ +A  +  + Y+L+ R+ +R A  Y
Sbjct: 50  VAMDMICVDLGPNAQDNAGDPVVLWGEGLPVERIAEMTKVSAYELITRLTSRVAMKY 106


>gi|309789198|ref|ZP_07683791.1| alanine racemase, catabolic domain protein [Shigella dysenteriae
           1617]
 gi|308922952|gb|EFP68466.1| alanine racemase, catabolic domain protein [Shigella dysenteriae
           1617]
          Length = 165

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 4/154 (2%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL ALK N   +   + +AR  +VVK NAYG G E+I  AL   G    F + 
Sbjct: 3   RPIQASLDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSAL---GATDGFALL 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+  I+D + +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLD 119

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQL 157
             L+V++G NRLG      L         +  + 
Sbjct: 120 IYLKVNSGMNRLGFQPDRVLTVWQQLRASECWRN 153


>gi|291277443|ref|YP_003517215.1| alanine racemase [Helicobacter mustelae 12198]
 gi|290964637|emb|CBG40491.1| alanine racemase [Helicobacter mustelae 12198]
          Length = 342

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 85/374 (22%), Positives = 132/374 (35%), Gaps = 45/374 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             ++ ID    KNN   + + L    + A V+KDNAYG G E++A   +N G++  FV +
Sbjct: 1   MAQILIDSQKYKNNLDLITSHLHDKTKLAIVLKDNAYGHGLEEMAHLSHNYGIKSVFVKN 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
             E  K+        IF      P         NL PVI S   L   +   S  +    
Sbjct: 61  ESEARKIEHLFEHITIFYGIPSSP------LPPNLHPVIHSNQNLDLLASPCSVELKI-- 112

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER--- 181
               + G NR G++ +E          K LG   +   +    D      N  Q+ +   
Sbjct: 113 ----NIGMNRNGIAPRELESMITKILQKDLGLFGVFAHNGYGDDLMEDFQNGQQIFQEIK 168

Query: 182 ----FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD---KINKSHPMQT 234
               + +    +        +SSG L    +   L R G++ YG       +  +  +Q 
Sbjct: 169 EQTLYLSQKLGFPRPRFHSLNSSGTLRSREFPDDLVRIGMAAYGYCGANFPLEIADRLQP 228

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           + +  A  I       G  + Y G   L  DS ++   IGY DG            S   
Sbjct: 229 IASLWADKICTHYLPKGAKIGYSGMSVLQEDSFVSTYDIGYGDGLFRFDGTQPPYFSADG 288

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
           FL            IL K +MD          ++   + I +F        +A    T  
Sbjct: 289 FL------------ILPKTSMDCF-------SALSTKERICVFDD---ARTLAQIFHTIP 326

Query: 355 YDLLVRIGTRYAKF 368
           Y++LVRI     + 
Sbjct: 327 YEILVRISPFIQRI 340


>gi|110803655|ref|YP_698455.1| alanine racemase [Clostridium perfringens SM101]
 gi|110684156|gb|ABG87526.1| putative alanine racemase [Clostridium perfringens SM101]
          Length = 350

 Score =  119 bits (299), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 118/328 (35%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K +AYGLG +KIA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGDAYGLGSKKIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++ E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIYESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A     +    Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKPNKLDSFIERVKNEFPNLEIDGIYTHLHNA--KYVNYTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  Y+     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYRDKVRIIHCMASSAIINDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|313619775|gb|EFR91379.1| alanine racemase [Listeria innocua FSL S4-378]
          Length = 161

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 4/154 (2%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N     N L       AVVK NAYG G  + A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQNKLPDKVALWAVVKANAYGHGIIETAKIAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
             ++E + LR    +    ++ G    ++  +   N I   S       +   ++     
Sbjct: 66  AILDEALALREAGFRNESILVLGATRKEDANLAAKNNI---SVTVFREDWLDDLTLEAPL 122

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ 156
              L+VD+G  RLG+  +E       +       
Sbjct: 123 RIHLKVDSGMGRLGIRSREEAQRIETTIAIDHQM 156


>gi|169342418|ref|ZP_02863482.1| alanine racemase family protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299538|gb|EDS81602.1| alanine racemase family protein [Clostridium perfringens C str.
           JGS1495]
          Length = 350

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 65/328 (19%), Positives = 119/328 (36%), Gaps = 20/328 (6%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + +    ++L  ++NN + +  L  N +  AV+K  AYGLG ++IA  + +  V    V 
Sbjct: 2   SNYFWCDVNLKNIENNINVIRDLIQNKKLIAVIKGEAYGLGSKEIAEFIEDK-VDIIAVG 60

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +++E + L        I +L  +    +      NLI  + +          +       
Sbjct: 61  NIDESLCL--DNINKDILILSPLCTKDDFKDERDNLILTLDN----EEILNELDKETKKR 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL-IISHLACADDPSSHVNSVQLERF 182
             + VDTG NR+G+   +   F     N+        I +HL  A D +      Q+E F
Sbjct: 115 VHIYVDTGMNRMGIKSNKLDSFIERVKNEFPNLEIDGIYTHLHNAKDVN--YTLKQIELF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG---TDKINKSHPMQTVVTAE 239
           ++ +  YK     +   +   +  +   +          G      I  +  ++      
Sbjct: 173 KSTVEKYKDKVRIIHCMASSAIVNDQLRKACDFTTGARAGNVLYGYIGFNKGIKKTYEYY 232

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD--GYPLTLSG---LDSEHSPSV 294
           A+ +   K   G+ V YG   K  +D  I +   G     G    +      D       
Sbjct: 233 AKPVNTYKVSKGQTVGYGCLFKADKDMEIGIIECGNVHGLGISREIKNNVFYDIFRMIYR 292

Query: 295 FLGGKGFI--KGYMVPILGKITMDMTMF 320
               +  I      V ILGK+ M++T+ 
Sbjct: 293 RFKERSVIFNNNVPVKILGKVNMNITII 320


>gi|255024620|ref|ZP_05296606.1| hypothetical protein LmonocyFSL_16286 [Listeria monocytogenes FSL
           J1-208]
          Length = 118

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 4   NEFLRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +    ++ID  A++ N       L  N    AVVK NAYG G  ++A     AG + F V
Sbjct: 6   HRPTWIEIDRAAIRENIKNEQRKLPENVDLWAVVKANAYGHGIIEVARTAKEAGAKGFCV 65

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI 100
             ++E + LR    Q    ++ G    ++  +   N I
Sbjct: 66  AILDEALALREAGFQDDFILVLGATRKEDANLAAKNHI 103


>gi|323359913|ref|YP_004226309.1| alanine racemase [Microbacterium testaceum StLB037]
 gi|323276284|dbj|BAJ76429.1| alanine racemase [Microbacterium testaceum StLB037]
          Length = 347

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 73/369 (19%), Positives = 119/369 (32%), Gaps = 39/369 (10%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           ++DL A   N H +      A    VVKD+AY  G E +     + GV+ F    V  G 
Sbjct: 6   RVDLDAFARNLHRVRDAVAPAEPMFVVKDDAYAHGLEVLVRRARSEGVRWFGAFDVVTGA 65

Query: 70  KLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            +R    P ARIFV               +L   +     L   + L + G S    L++
Sbjct: 66  AVRAIAGPDARIFVWLIGGADDLAAGIAADLDLGVGDQSLLDDLAALTADG-SARVHLKI 124

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF--RTLI 186
           DTG +R G+  ++       +               +   + S   +      F      
Sbjct: 125 DTGLHRNGIRPEDWDAALARTATLVEQGRVRFEGIWSHISEASDADDDDARALFLAARDA 184

Query: 187 SHYKGIEA---SLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
           +   G+E     LA+S+       +   L R G   YG             +        
Sbjct: 185 ARAVGLEPRFSHLAASAAGFARGEFREDLVRVGAFSYGIRPAGGPGEAELGI-------- 236

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
                   E ++       + DS      +G A G P  L+G     + +          
Sbjct: 237 --------EPIASLTATVASVDSQGVHVDVGSAHGLPSALAGRFDVATSAGP-------- 280

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDI--KLDDVALASGTTNYDLLVRI 361
              V  +G      T   +    + EVG+ + IFG        D+A    T   ++ +R+
Sbjct: 281 -RRVEAIG-----FTSLTVAPWETAEVGEPLTIFGRGALCSATDLAELIDTIGEEIALRV 334

Query: 362 GTRYAKFYT 370
                + YT
Sbjct: 335 SPVLPRVYT 343


>gi|254875861|ref|ZP_05248571.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254841882|gb|EET20296.1| alanine racemase [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 321

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 23/339 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
             +VK NAYG+G E I     +  V  + +  ++E   L+       I  L GI+     
Sbjct: 1   MFIVKANAYGIGIENIYKVTNDL-VDAYGIARIDEYYVLKNLGCTKDIVFLSGIYAECFD 59

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
                N+IP++S+V  +  Y K      S    L  D G  R G    + +         
Sbjct: 60  FKIPKNVIPILSNVLLIKDYIKYED-DKSKQVMLDFDCGMGRFGFYRDDFIKHLDMLKIS 118

Query: 153 KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL 212
               + L        +        +       L++    ++ + ++S   L   ++  + 
Sbjct: 119 GFSNIILFSHIPTGYNGYDRSKKYIDKIL---LLAEETKLKYTFSNSPVSLFDTDFLQEY 175

Query: 213 TRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAA 272
            R   ++ G   +  +   ++  ++ +A II IR    GE +SYG +    +D+ +A+  
Sbjct: 176 IRSSSAVLGYDQEPKE---IKFSLSLKACIISIRDIPKGEYISYGNEYFCNKDTTVAILN 232

Query: 273 IGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVG 331
           IGYADG               +       I     PIL  I MD    DI+     +++ 
Sbjct: 233 IGYADGL-----------GCEIHHDSYLLINATKCPIL-SINMDYLYVDISAIKHQLKML 280

Query: 332 DYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RYAKF 368
           D I++FGP+ + L+  A     T  + L ++   R  K 
Sbjct: 281 DMIELFGPNSLSLEQHANMYNITKDEALTKLNALRVRKI 319


>gi|322805977|emb|CBZ03544.1| alanine racemase [Clostridium botulinum H04402 065]
          Length = 121

 Score =  117 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 45/119 (37%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
            ++  +  +++L  L  N  ++          AVVK N YG G   IA  L   G     
Sbjct: 3   RNHRPVWEEVNLDNLSYNMRNIKKKVNCKEIFAVVKANGYGHGALDIASTLLENGATRLS 62

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           V  + E  +LR       I +L    P   + I D N+ PV+ S       SK  S   
Sbjct: 63  VACLSEATELREGGITCPINILGITPPTLFEDIIDYNIEPVVFSYDYANQLSKAASLKK 121


>gi|309806954|ref|ZP_07700936.1| alanine racemase, N-terminal domain protein [Lactobacillus iners
           LactinV 03V1-b]
 gi|308166574|gb|EFO68771.1| alanine racemase, N-terminal domain protein [Lactobacillus iners
           LactinV 03V1-b]
          Length = 123

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 1   MHS--NEFLRLKIDLTALKNNW-HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S  +   ++ +DL A+K+N  + +  L    +  AVVK N YG G   I+     AG 
Sbjct: 1   MISGIHRPTKILVDLAAIKSNVENEIKNLKSGQKLWAVVKANGYGHGSVVISKTAIAAGA 60

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS 113
           Q   V  ++E ++LR    +  I VL    P    +  + ++   +  +  L   +
Sbjct: 61  QGLCVAILDEAIELRKAGIKVPILVLGITLPKFASLAAENDISLTVGDLDWLKKLA 116


>gi|309802669|ref|ZP_07696773.1| putative alanine racemase [Bifidobacterium dentium JCVIHMP022]
 gi|308220733|gb|EFO77041.1| putative alanine racemase [Bifidobacterium dentium JCVIHMP022]
          Length = 353

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 65/294 (22%), Positives = 103/294 (35%), Gaps = 25/294 (8%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGN----ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
                 +  +DL AL++N   + ++ G          VVK +AYG G    A A    G 
Sbjct: 24  RRRYPAQAIVDLAALRDNMRHLVSVVGGPNSGTAVMGVVKADAYGHGLIPAALAALAGGA 83

Query: 58  QDFFVTSVEEGVKLRLYTP-----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
                    E + LR             +V  G     ++++ +   + V S        
Sbjct: 84  TWLGTAQSHEALLLRKAGIGLDRCHILTWVYNGTAVPFDELVANDIDVSVGSLGGIDGVA 143

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADD 169
                 G +    ++VD+GF R G +      AL        + +  +    SHLA AD 
Sbjct: 144 EAARRLGKTARVHVKVDSGFGRNGFTPAGFDAALAKLVPLVKEGVLHVVGQWSHLAVADA 203

Query: 170 PSSH----VNSVQLERFRTLISHYKGIE-----ASLASSSGILLGPNYHFQLTRPGISLY 220
           P           Q+E F+      +          LA+++  L  P  HF+LTRPGI LY
Sbjct: 204 PDVPEFVASTDRQIENFKDFTRRMEAAGIAPEIRHLANTAATLSRPEIHFELTRPGIGLY 263

Query: 221 GGTDKINKSHPMQT----VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAV 270
           G         P        +T +A++  ++   AG  +SYG             
Sbjct: 264 GYEADPAMGTPGTYGLKPAMTLQAQLGTVKDVEAGHGISYGRTYLTPDRHFHGN 317


>gi|224419174|ref|ZP_03657180.1| alanine racemase [Helicobacter canadensis MIT 98-5491]
 gi|253828107|ref|ZP_04870992.1| alanine racemase [Helicobacter canadensis MIT 98-5491]
 gi|313142680|ref|ZP_07804873.1| alanine racemase [Helicobacter canadensis MIT 98-5491]
 gi|253511513|gb|EES90172.1| alanine racemase [Helicobacter canadensis MIT 98-5491]
 gi|313131711|gb|EFR49328.1| alanine racemase [Helicobacter canadensis MIT 98-5491]
          Length = 358

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 67/386 (17%), Positives = 125/386 (32%), Gaps = 55/386 (14%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA---RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
              L+I+     +N+H +    G     + A V+KDNAYG G +++A     A +   FV
Sbjct: 1   MAYLQINSQHFFSNYHQIAQFIGQENIHKIAIVLKDNAYGHGLKEMAQLAKEAKITTCFV 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            + +E +++        I          E        +   +    +     L       
Sbjct: 61  KNTKEALEIAAMFRHITIL----YPQSLEDKEALQQCLKQDNIYFCVASLEALKLYPKQT 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              L++++G NR G+  Q+  +       ++L  + +   +    D  S      Q   F
Sbjct: 117 KIELEINSGMNRNGIQAQQLQEAFEIINKRELELIGVFSHNGFGDDFGSEFYT--QNNEF 174

Query: 183 RTLISHYKGIEASLASSSGILLGP-----------------NYHFQLTRPGISLYGGTDK 225
             +      +    +                               L R GI+ YG   +
Sbjct: 175 LMVKKKVLELCNQYSFKKPRFHFFSSSGALRAVRYNESLPLELQDDLFRIGIAFYGYLCQ 234

Query: 226 INK--SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
             +     ++ + +  AR I       G  + YGG  +   D+L++   +GY DG     
Sbjct: 235 DIRFCGLNVKPIASLWARKISTYFLKKGSRIGYGGVSETKEDTLVSSYDVGYGDGLFRLR 294

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD--YIQIFGPDI 341
            G++ +                + P   + +MD              GD   + I     
Sbjct: 295 EGMELKTKEGF----------KIYP---RSSMDCLSI---------QGDREELCII---E 329

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAK 367
             +  A A GT  Y++LV +     K
Sbjct: 330 DANPWAEAFGTIPYEILVHLQPTIPK 355


>gi|153841826|ref|ZP_01993440.1| alanine racemase 1 [Vibrio parahaemolyticus AQ3810]
 gi|149745444|gb|EDM56695.1| alanine racemase 1 [Vibrio parahaemolyticus AQ3810]
          Length = 129

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +  +  IDL+AL++N   + A +  ++  AVVK N YG G   +A          F
Sbjct: 1   MSYMKAAKACIDLSALQHNLQRVKAQAPESKVMAVVKANGYGHGLRHVAKHA--NHADAF 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFYSK 114
            V  +EE ++LR       I +L G + PG   ++   N+  V+    QL    +
Sbjct: 59  GVARIEEALQLRACGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLIALEQ 113


>gi|242309198|ref|ZP_04808353.1| alanine racemase [Helicobacter pullorum MIT 98-5489]
 gi|239524239|gb|EEQ64105.1| alanine racemase [Helicobacter pullorum MIT 98-5489]
          Length = 359

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 76/384 (19%), Positives = 137/384 (35%), Gaps = 51/384 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG---NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
              L+I+     +N   + ++ G     + A V+KDNAYG G  ++A     AG+   FV
Sbjct: 1   MPYLQINPHYFIDNLQVIKSIIGEDEGHKIAIVLKDNAYGHGLVELAKISSEAGITSCFV 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            + +E +++  +     I          E      + I   +    +     L       
Sbjct: 61  KNTQEAIEVAKWFEHISIL----YPQSLESETLLKSCIQRENIYFCVANIESLDLYPPKS 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL--------ACADDPSSHV 174
              L++++G NR G+ + +  +    S   KL  + +   +           A + S+  
Sbjct: 117 KIELKINSGMNRNGIQINKLQEALKKSLENKLEIVGVFSHNGFGDNIGSEFYAQNDSNLH 176

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGP-------NYHFQLTRPGISLYG--GTDK 225
              ++ +F    S  K     L+SS  +                L R GI+LYG    D 
Sbjct: 177 IKREVLQFCKANSLKKPRFHFLSSSGALRAAKYNVSLPIELQDDLYRIGIALYGYLCQDS 236

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           +     ++ + +  A+ I  +    G  + YGG  K+  D L++   IGY DG      G
Sbjct: 237 MLYEVQLKPIASLWAKKISTQLLKKGSRIGYGGISKVDEDMLVSTYDIGYGDGLFRVREG 296

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD--YIQIFGPDIKL 343
           ++                   + I  + +MD              GD   + IF     +
Sbjct: 297 MELFTKEG-------------LKIFPRASMDCISI---------QGDCEEVCIFDD---V 331

Query: 344 DDVALASGTTNYDLLVRIGTRYAK 367
              A A GT  Y++L  + +   K
Sbjct: 332 RPWAEAFGTIPYEILSHLHSYIPK 355


>gi|294783099|ref|ZP_06748423.1| alanine racemase [Fusobacterium sp. 1_1_41FAA]
 gi|294479977|gb|EFG27754.1| alanine racemase [Fusobacterium sp. 1_1_41FAA]
          Length = 358

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 136/377 (36%), Gaps = 32/377 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ F+ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFFVSL--DKKALYHNIEYLREY-KQKELLPVIKANAYGHDILLIAKALYDYDIKVW 57

Query: 61  FVTSVEEGVKLRLYT----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
            V    E V +  Y           +++        ++     I    ++  +      +
Sbjct: 58  AVARYSEAVSICEYFKTLSIDDFKILIFESLIDDYSLLEKYPQICP--TLNSIKDLKNAL 115

Query: 117 SCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           +  +S    +L++D GF R G+  +E  +  +      L  LS+     + +      V 
Sbjct: 116 ANNISIDRLSLKIDFGFGRNGIKYEEVDELKNLIKYNSLKFLSIFSHLFSASYTDGLEVI 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
                     +         L +++GI           R G+  YG  +       M+ V
Sbjct: 176 KK-FTDLVNKLGRNNFEMIHLQNAAGIYNYDVDIVTHIRTGMLTYGLQEAGFYDLDMKPV 234

Query: 236 VTAE-ARIILIRKALAGELVSYGGQKKLT-RDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            T     +  +R     + V+Y     +      IA   IGY DG+              
Sbjct: 235 FTGLIGYVDSVRYVNELDYVAYQELSSIDLGTKKIAKIKIGYGDGFS------------K 282

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
                   IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G +
Sbjct: 283 ANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDEVHLY---HRPNEIKTKTGFS 336

Query: 354 NYDLLVRIGT-RYAKFY 369
             +LL+ I   R  + +
Sbjct: 337 MLELLIAISPLRVKRIF 353


>gi|237736823|ref|ZP_04567304.1| LOW QUALITY PROTEIN: alanine racemase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420685|gb|EEO35732.1| LOW QUALITY PROTEIN: alanine racemase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 256

 Score =  116 bits (290), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 59/259 (22%), Positives = 105/259 (40%), Gaps = 22/259 (8%)

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHV 174
             +     +++DTG  RLG   +E            +  +  I SHL+ AD  +      
Sbjct: 2   NNLKVGIHIKIDTGMGRLGFLPEEGERVVDYCLENGINIM-GIYSHLSDADGFNRESDDY 60

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILL--GPNYHFQLTRPGISLYGGTDKINKSHPM 232
              Q+++F+    +   ++     +SG +L         + R GI +YG          +
Sbjct: 61  TETQIKKFQIFEKYKDKVKYLHILNSGGILRFNEEISGNIVRAGICMYGMIANYRVED-L 119

Query: 233 QTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           + V   + +I+ IR       +SYG +  L +    A   +GYADG     S        
Sbjct: 120 KRVFCVKTKILSIRTVEDDSFISYGRKYVLHKGETFATIGMGYADGIKKEFSNKS----- 174

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV--GDYIQIFGPDIKLDDVALAS 350
                    I+G   PI+G+I MDM M  I +S+  ++  G  + +   DI ++++    
Sbjct: 175 ------YVIIEGEKCPIIGEICMDMCMVKIPESIKDKISLGTEVIVVRDDI-IEEI-NIE 226

Query: 351 GTTNYDLLVRIGTRYAKFY 369
              ++D+L  IG R  + Y
Sbjct: 227 HKCSWDILTGIGRRVYRVY 245


>gi|289674440|ref|ZP_06495330.1| alanine racemase [Pseudomonas syringae pv. syringae FF5]
          Length = 74

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
               I G    +LG+++MDM   D+TD     +G  ++++G  +   +VA  + T  Y++
Sbjct: 1   TPVQIDGQPSRLLGRVSMDMLCVDLTDVPQAGLGSRVELWGKQVLASEVAQRAETIPYEI 60

Query: 358 LVRIGTRYAKFYT 370
              +  R  + Y+
Sbjct: 61  FCNL-RRVPRIYS 72


>gi|254372286|ref|ZP_04987777.1| hypothetical protein FTCG_01352 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|254373765|ref|ZP_04989248.1| hypothetical protein FTDG_01549 [Francisella novicida GA99-3548]
 gi|151570015|gb|EDN35669.1| hypothetical protein FTCG_01352 [Francisella novicida GA99-3549]
 gi|151571486|gb|EDN37140.1| hypothetical protein FTDG_01549 [Francisella novicida GA99-3548]
          Length = 321

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 72/338 (21%), Positives = 129/338 (38%), Gaps = 23/338 (6%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
             +VK NAYG+G E I     +  V  + +  +EE   L+       I  L GI+     
Sbjct: 1   MFIVKANAYGIGIENIYKVTNDL-VDAYGIARIEEYYVLKSLGCTKDIVFLSGIYAECFD 59

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
                N+IP++ +   +  Y K      S    L  D G  R G    + +       + 
Sbjct: 60  FKIPKNVIPILGNELLIKDYIKYED-DKSKQVMLDFDCGMGRFGFYRDDFIKHLDTIKSS 118

Query: 153 KLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL 212
               + L        +        +       L++    ++ + ++S   L   ++  + 
Sbjct: 119 GFSNIILFSHIPTGYNGYDRSKRYIDKIL---LLAEETKLKYTFSNSPVSLFDTDFQQEY 175

Query: 213 TRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAA 272
            R   ++ G   +  +   ++  ++ +A II IR    GE +SYG +    +D+ +A+  
Sbjct: 176 IRSSSAVLGYDQEPKE---IKFSLSLKACIISIRDIPKGEYISYGNEYFCNKDTTVAILN 232

Query: 273 IGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVG 331
           IGYADG               +       I     PIL  I MD    DI+     +++ 
Sbjct: 233 IGYADGL-----------GCEIHHDSYLLINATKCPIL-SINMDYLYVDISAIKHQLKML 280

Query: 332 DYIQIFGPD-IKLDDVALASGTTNYDLLVRIGT-RYAK 367
           D I++FGP+ + L+  A     T  + L ++   R  K
Sbjct: 281 DMIELFGPNSLSLEQHASMYNITKDEALTKLNALRVRK 318


>gi|239637087|ref|ZP_04678081.1| alanine racemase 2 [Staphylococcus warneri L37603]
 gi|239597437|gb|EEQ79940.1| alanine racemase 2 [Staphylococcus warneri L37603]
          Length = 358

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 71/349 (20%), Positives = 135/349 (38%), Gaps = 37/349 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D  A  NN   +          AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VDTEAFYNNAKKVKNQQP---IMAVVKNNAYHYGLEFAVRQFLRAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A +F++  ++      + D ++   + S+     + + +         L+ + 
Sbjct: 64  VRELAPDATVFLMNAVY--DFDTVRDYHIHMTLPSLKYYYEHKEDL---RDIHVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      +QE L    ++ N K   +S + +H   AD+       V+   +    
Sbjct: 119 LLHRSGFKTLEEIQEVLQDHQHNKNPKRMIISGLWTHFGYADEFGVTEYDVERSAWLNVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVT 237
            TL++     +   + +S            H    R GI+LYG       +   +Q  +T
Sbjct: 179 HTLLNEGYQFDYIHSQNSASYYREGQVVLPHHTHARVGIALYGSRPYSGLNESAIQQALT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +A +I IR+   G+   Y    +   D+  +AV  +GY DG                  
Sbjct: 239 VKANVIQIREVQNGDYCGYSWAFETQHDNTKLAVVDVGYGDGILRA------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
             +  I G   PI   + M     ++ + +  +  D + ++   +++D+
Sbjct: 287 QHEALINGKRYPIR-ALMMSHMFVEVDEHVHAQ--DQVVLYNESMRIDE 332


>gi|330684704|gb|EGG96402.1| putative alanine racemase [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 67/349 (19%), Positives = 131/349 (37%), Gaps = 37/349 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D  A  +N   +          AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VDTEAFYSNAKKVKNQQP---IMAVVKNNAYHYGLEFAVKQFLRAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A +F++  ++      + D ++   + S+     +   +         L+ + 
Sbjct: 64  VRELAPDATVFLMNAVY--DFDTVRDYHIHMTLPSLNYYYEHKADL---RDIHVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      +Q+ L     + N +   +S + +H   AD+        +   +    
Sbjct: 119 LLHRSGFKTLEEIQQVLQDHQQNKNSERMIISGLWTHFGYADEFGVPEYDEERSAWLNVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQTV-VT 237
            TL++     +   + +S            H    R GI+LYG     +         +T
Sbjct: 179 HTLLNEGYQFDYIHSQNSASYYREGQVVLPHHTHARVGIALYGSRPYSDLDESTIQQALT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +A +I IR+   G+   Y    +   D+  +AV  +GY DG   T              
Sbjct: 239 VKANVIQIREVQNGDYCGYSWAFETQHDNTKLAVVDVGYGDGILRT------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
             +  I G   PI   + M     ++ + +  +  D + ++   +++D+
Sbjct: 287 QHEALINGKRYPIR-ALMMSHMFVEVDEHVHAQ--DQVVLYNESMRIDE 332


>gi|154497027|ref|ZP_02035723.1| hypothetical protein BACCAP_01320 [Bacteroides capillosus ATCC
           29799]
 gi|150273426|gb|EDN00554.1| hypothetical protein BACCAP_01320 [Bacteroides capillosus ATCC
           29799]
          Length = 355

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 70/338 (20%), Positives = 117/338 (34%), Gaps = 15/338 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L I+  A+K N   +   +G A   A +  +A G G   +A  L + G+  F V+   + 
Sbjct: 4   LIIERQAVKQNIAVVRERAGRAAIYAALTGDAGGAGLVDMARLLRDEGIGRFAVSEAADA 63

Query: 69  VKLRLYTP--QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-HPYA 125
             LR      +  + +       + + + D N +  I S+      + L     +     
Sbjct: 64  AALRKAGFVDEEILMLRSTADREELEQLVDVNAVCTIGSIDAGLALNGLAESRSTVAEAH 123

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD-DPSSHVNSVQLERFRT 184
           +QVDTG    G    E         N     +S I + L     D       +Q  +   
Sbjct: 124 IQVDTGLGFGGFLCTEPEKVLSAYRNLPNVAISGIYTQLHSVKADGKDAAAQIQSFQTLL 183

Query: 185 LISHYKGIEASLASSSGI---LLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
                 G E     ++G    L   +      R G  L G   +      +Q V   EA 
Sbjct: 184 EAIRSAGFETGTVHAAGSFALLHYDDALLDAVRAGSVLLGRCRRTKGD-GLQRVGYGEAS 242

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYP----LTLSGLDSEHSPSVFLG 297
           +  +R   AG  V       L R + + V  +GY +G+            +         
Sbjct: 243 LEEVRWLPAGHTVGSEQPVTLKRPTRVGVLPVGYQNGFGVARVRDPGFWAAIRRWLRGRR 302

Query: 298 GKGFIKGYMVPILGKI-TMDMTMFDITDSLSIEVGDYI 334
               I G  V ++G+I  M+ T+ D+TD +    GD +
Sbjct: 303 ISVRIDGQKVKVIGRIGAME-TLLDVTD-MKCSSGDLV 338


>gi|295115115|emb|CBL35962.1| Alanine racemase [butyrate-producing bacterium SM4/1]
          Length = 155

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 8   RLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            L+IDL  +++N+ ++ +++    +    VK NAYG G  +   AL  A      V +++
Sbjct: 11  WLEIDLDTIRSNFAALRSMAGPGIKIMPAVKANAYGHGIVESCRALEEAEADYLGVGNID 70

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLTFYSKLMSCGVS---- 121
           E + LR    Q  I +  G    +   +    +LIP I SV      S+L          
Sbjct: 71  EAILLREIGIQTPILIFAGNLVEEVADLYIRYSLIPTIFSVKAAQAISRLSKAEHPVFLG 130

Query: 122 HPYALQVDTGFNRLG 136
                  +T   R  
Sbjct: 131 ICLVYNKNTQNCRGD 145


>gi|262066393|ref|ZP_06026005.1| alanine racemase [Fusobacterium periodonticum ATCC 33693]
 gi|291379960|gb|EFE87478.1| alanine racemase [Fusobacterium periodonticum ATCC 33693]
          Length = 358

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 70/377 (18%), Positives = 137/377 (36%), Gaps = 32/377 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ F+ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFFVSL--DKKALYHNIEYLREY-KQKELLPVLKANAYGHNILLIAKALYDYDIKVW 57

Query: 61  FVTSVEEGVKLRLYT----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
            V    E V +  Y           +++        ++   + I    ++  +      +
Sbjct: 58  AVARYSEAVSICEYFKTLSIDDFKILIFESLIDDYSVLEKYSQICP--TLNSIKDLKNAL 115

Query: 117 SCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVN 175
           +  VS    +L++D GF R G+  +E  +  +      L  LS+     + +      V 
Sbjct: 116 ANNVSIDRLSLKIDFGFGRNGIKYEEIDELKNLIKYNSLKFLSIFSHLFSASYTDGLEVI 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTV 235
                     +         L +++GI           R G+  YG  +       ++ V
Sbjct: 176 KK-FTDLVNKLGKNNFEMIHLQNAAGIYNYDVEIVTHIRTGMLTYGLQEAGFYDLDLKPV 234

Query: 236 VTAE-ARIILIRKALAGELVSYGGQKKLT-RDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
            T     +  +R     + V+Y     +      IA   IGY DG+              
Sbjct: 235 FTGLIGYVDSVRYVNELDYVAYQELSSIDPGTKKIAKIKIGYGDGFS------------K 282

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
                   IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G +
Sbjct: 283 ANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDEVHLY---HRPNEIKTKTGFS 336

Query: 354 NYDLLVRIGT-RYAKFY 369
             +LL+ I   R  + +
Sbjct: 337 MLELLIAISPLRVKRIF 353


>gi|1150619|emb|CAA90279.1| AlaR [Streptococcus pneumoniae]
          Length = 111

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 251 GELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL 310
           G  + YG   +   + +IA   IGYADG+   +                  + G   PI+
Sbjct: 2   GACMGYGATYQADSEQVIATVPIGYADGWTRDMQNFS------------VLVDGQACPIV 49

Query: 311 GKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYA 366
           G+++MD     +     +  G  + + G     +I    VA    T NY+ +  +  R  
Sbjct: 50  GRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTINYEEVCLLSDRIP 107

Query: 367 KFY 369
           + Y
Sbjct: 108 REY 110


>gi|57866855|ref|YP_188547.1| alanine racemase [Staphylococcus epidermidis RP62A]
 gi|242242676|ref|ZP_04797121.1| alanine racemase [Staphylococcus epidermidis W23144]
 gi|57637513|gb|AAW54301.1| alanine racemase family protein [Staphylococcus epidermidis RP62A]
 gi|242233812|gb|EES36124.1| alanine racemase [Staphylococcus epidermidis W23144]
          Length = 357

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 36/348 (10%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           D  A   N   +     N    AVVK+NAY  G E        A +  F  TS+ E +++
Sbjct: 8   DTEAFYQNAVKVKN---NEPIMAVVKNNAYHYGLEFAVKTFLKADINTFSTTSLNEAIRV 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           R   P+A IF++  ++       +D ++     ++P L +Y K           L+ +  
Sbjct: 65  RKIAPEATIFLMNPVYDFDLVKRYDIHM-----TLPSLNYYYKYKQDLKGIHVHLEYENL 119

Query: 132 FNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----RT 184
            +R G    E +      H+  N+    +S I +H   AD+       ++ + +     T
Sbjct: 120 LHRSGFRNIEEIREVLKDHDQNNQDKMIISGIWTHFGYADEFDVDEYKMERDAWLNLINT 179

Query: 185 LISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAE 239
           L++     +   + +S      N     H    R GI+LYG     +     +   +T +
Sbjct: 180 LLNENYHFDMIHSQNSASYFRENQMLLPHHTHARVGIALYGSRPYSLINEERITQSLTVK 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             +I +R    G+   Y    ++  D   +AV  IGY DG   +                
Sbjct: 240 GNVIQVRDVNKGDYCGYSFAFEVKNDHTQLAVVDIGYGDGILKS------------RAKH 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 288 EAIINGKRYPIR-ALMMSHMFIEVDDEVHAQ--DEVILYNKDIRIDEF 332


>gi|224476530|ref|YP_002634136.1| putative alanine racemase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222421137|emb|CAL27951.1| putative alanine racemase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 358

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/351 (22%), Positives = 138/351 (39%), Gaps = 41/351 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D     +N   + A   N    AVVK+NAY  G E    A   AG+  F  TS++E V+
Sbjct: 7   VDRKKFIDNAKQVKA---NQNLMAVVKNNAYNYGLEFSVKAFQEAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P+A IF++  ++  +     + ++     ++P L +Y +           L+ + 
Sbjct: 64  IRKIAPEATIFLMNAVYDFETVRENEIHM-----TLPSLAYYYEHKEDLEGVHVHLEFEN 118

Query: 131 GFNRLG----LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +R G       +E L     + + K   +S I +H   AD+       ++ E +  ++
Sbjct: 119 LLHRSGLRSLDEFKEVLKDHEQNKSDKKMIISGIWTHFGYADEFDVPEYEIEKEAWLNIV 178

Query: 187 ----SHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVT 237
                     E   A +S      N          R GI+LYG       S   +Q  +T
Sbjct: 179 HSLLEEGYKFELIHAQNSAAFYRENQQLLPEHTHGRVGIALYGSRPYSKLSEKQIQQSLT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +  +I +R    GE   Y    ++ ++   +AV  +GY DG   T              
Sbjct: 239 VKGNVIQVRDVQKGEYCGYSFAYEVEQNHTKLAVVDVGYGDGVLRT------------RA 286

Query: 297 GGKGFIKGYMVPI--LGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
             +  I G   PI  L    M      + DS++ E  D + ++  D+++D+
Sbjct: 287 KHEATINGKRYPIKAL---MMSHMFVAVDDSVTAE--DEVILYNEDMRIDE 332


>gi|319401318|gb|EFV89529.1| putative alanine racemase [Staphylococcus epidermidis FRI909]
          Length = 357

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 36/348 (10%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           D  A   N   +     N    AVVK+NAY  G E        A +  F  TS+ E +++
Sbjct: 8   DTEAFYQNAVKVKN---NEPIMAVVKNNAYHYGLEFAVKTFLKAEINTFSTTSLNEAIQV 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           R   P+A IF++  ++       +D ++     ++P L +Y K           L+ +  
Sbjct: 65  RKIAPEATIFLMNPVYDFDLVKRYDIHM-----TLPSLNYYYKYKQDLKGIHVHLEYENL 119

Query: 132 FNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----RT 184
            +R G    E +      H+  N+    +S I +H   AD+       ++ + +     T
Sbjct: 120 LHRSGFRNIEEIRKVLKDHDQNNQDKMIISGIWTHFGYADEFDVDEYKMERDAWLNLINT 179

Query: 185 LISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAE 239
           L++     +   + +S      N     H    R GI+LYG     +     +   +T +
Sbjct: 180 LLNENYHFDMIHSQNSASYFRENQMLLPHHTHARVGIALYGSRPYSLINEERITQSLTVK 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             +I +R    G+   Y    ++  D   +AV  IGY DG   +                
Sbjct: 240 GNVIQVRDVNKGDYCGYSFAFEVKNDHTQLAVVDIGYGDGILKS------------RAKH 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 288 EAIINGKRYPIR-ALMMSHMFIEVDDEVHAQ--DEVILYNKDIRIDEF 332


>gi|251810827|ref|ZP_04825300.1| alanine racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876165|ref|ZP_06285032.1| putative alanine racemase [Staphylococcus epidermidis SK135]
 gi|251805662|gb|EES58319.1| alanine racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295190|gb|EFA87717.1| putative alanine racemase [Staphylococcus epidermidis SK135]
 gi|329732928|gb|EGG69273.1| putative alanine racemase [Staphylococcus epidermidis VCU028]
          Length = 357

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 36/348 (10%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           D  A   N   +     N    AVVK+NAY  G E        A +  F  TS+ E +++
Sbjct: 8   DTEAFYQNAVKVKN---NEPIMAVVKNNAYHYGLEFAVKTFLKAEINTFSTTSLNEAIRV 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           R   P+A IF++  ++       +D ++     ++P L +Y K           L+ +  
Sbjct: 65  RKIAPEATIFLMNPVYDFDLVKRYDIHM-----TLPSLNYYYKYKQNLKGIHVHLEYENL 119

Query: 132 FNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----RT 184
            +R G    E +      H+  N+    +S I +H   AD+       ++ + +     T
Sbjct: 120 LHRSGFRNIEEIREVLKDHDQNNQDKMIISGIWTHFGYADEFDVDEYKMERDAWLNLINT 179

Query: 185 LISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAE 239
           L++     +   + +S      N     H    R GI+LYG     +     +   +T +
Sbjct: 180 LLNENYHFDMIHSQNSASYFRENQMLLPHHTHARVGIALYGSRPYSLINEERITQSLTVK 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             +I +R    G+   Y    ++  D   +AV  IGY DG   +                
Sbjct: 240 GNVIQVRDVNKGDYCGYSFAFEVKNDHTQLAVVDIGYGDGILKS------------RAKH 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 288 EAIINGKRYPIR-ALMMSHMFIEVDDEVHAQ--DEVILYNKDIRIDEF 332


>gi|27467997|ref|NP_764634.1| putative alanine racemase [Staphylococcus epidermidis ATCC 12228]
 gi|293366638|ref|ZP_06613315.1| alanine racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315542|gb|AAO04676.1|AE016747_173 putative alanine racemase [Staphylococcus epidermidis ATCC 12228]
 gi|291319407|gb|EFE59776.1| alanine racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329736963|gb|EGG73220.1| putative alanine racemase [Staphylococcus epidermidis VCU045]
          Length = 357

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 36/348 (10%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           D  A   N   +     N    AVVK+NAY  G E        A +  F  TS+ E +++
Sbjct: 8   DTEAFYQNAVKVKN---NEPIMAVVKNNAYHYGLEFAVKTFLKAEINTFSTTSLNEAIRV 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           R   P+A IF++  ++       +D ++     ++P L +Y K           L+ +  
Sbjct: 65  RKIAPEATIFLMNPVYDFDLVKRYDIHM-----TLPSLNYYYKYKQDLKGIHVHLEYENL 119

Query: 132 FNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----RT 184
            +R G    E +      H+  N+    +S I +H   AD+       ++ + +     T
Sbjct: 120 LHRSGFRNIEEIREVLKDHDQNNQDKMIISGIWTHFGYADEFDVDEYKMERDAWLNLINT 179

Query: 185 LISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAE 239
           L++     +   + +S      N     H    R GI+LYG     +     +   +T +
Sbjct: 180 LLNENYHFDMIHSQNSASYFRENQMLLPHHTHARVGIALYGSRPYSLINEERITQSLTVK 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             +I +R    G+   Y    ++  D   +AV  IGY DG   +                
Sbjct: 240 GNVIQVRDVNKGDYCGYSFAFEVKNDHTQLAVVDIGYGDGILKS------------RAKH 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 288 EAIINGKRYPIR-ALMMSHMFIEVDDEVHAQ--DEVILYNKDIRIDEF 332


>gi|213622235|ref|ZP_03375018.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 178

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +DL A+ +N+ ++      A+  AV+K N YGLG E IAPALY A  + FFV  + EGV 
Sbjct: 16  VDLAAVVDNYQTLARHVAPAQCGAVLKANGYGLGAEAIAPALYAANCRIFFVAQLSEGVA 75

Query: 71  LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQ-LTFYSKLMSCGVSHPYALQV 128
           LR      A + +L G+ P          + P+++SV Q +T+ +   +     P  +Q+
Sbjct: 76  LRNILSADAMVVLLNGVMPQAMPFCCAQQITPLLNSVDQVMTWLALQEARSQRRPVLIQL 135

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACAD 168
           D+G +RLG++ ++          +       IISHLA AD
Sbjct: 136 DSGMSRLGVTPEQLARLAAIFRQRGWAAPDYIISHLANAD 175


>gi|167463178|ref|ZP_02328267.1| alanine racemase [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 81

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 5  EFLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +++ L AL  N  +      ++ R  AVVK +AYG G   IA     +G     V 
Sbjct: 6  RPTWVEVSLDALSGNLQAFRQALPDSIRIMAVVKADAYGHGAASIAREAIASGADHLAVA 65

Query: 64 SVEEGVKLRLYTPQAR 79
           ++E ++LR     A 
Sbjct: 66 FLDEALQLREAGISAP 81


>gi|329729391|gb|EGG65797.1| putative alanine racemase [Staphylococcus epidermidis VCU144]
          Length = 357

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 133/348 (38%), Gaps = 36/348 (10%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           D  A   N   +     N    AVVK+NAY  G E        A +  F  TS+ E +++
Sbjct: 8   DTEAFYQNAVKVKN---NEPIMAVVKNNAYHYGLEFAVKTFLKAEINTFSTTSLNEAIRV 64

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
           R   P+A IF++  ++       +D ++     ++P L +Y K           L+ +  
Sbjct: 65  RKIAPEATIFLMNPVYDFDLVKRYDIHM-----TLPSLNYYYKYKQDLKGIHVHLEYENL 119

Query: 132 FNRLGLSLQEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----RT 184
            +R G    E +      H+  N+    +S I +H   AD+       ++ + +     T
Sbjct: 120 LHRSGFRNIEEIREVLKDHDQNNQDKMIISGIWTHFGYADEFDVDEYKMERDAWLNLINT 179

Query: 185 LISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAE 239
           L++     +   + +S      N     H    R GI+LYG     +     +   +T +
Sbjct: 180 LLNENYHFDMIHSQNSASYFRENQMLLPHHTHARVGIALYGSRPYSLINEERITQSLTVK 239

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
             +I +R    G+   Y    ++  D   +AV  IGY DG   +                
Sbjct: 240 GNVIQVRYVNKGDYCGYSFAFEVKNDHTQLAVVDIGYGDGILKS------------RAKH 287

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 288 EAIINGKRYPIR-ALMMSHMFIEVDDEVHAQ--DEVILYNKDIRIDEF 332


>gi|46206247|ref|ZP_00210260.1| COG0787: Alanine racemase [Magnetospirillum magnetotacticum MS-1]
          Length = 281

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 52/145 (35%), Gaps = 4/145 (2%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
             R  +DL A+++N  ++  L+ ++   AVVK +AYG G    A      G         
Sbjct: 54  PARAVVDLAAVRDNVRALADLAPSSEVMAVVKADAYGHGLVASALGALAGGATWLGTAQP 113

Query: 66  EEGVKLRLY--TPQARIFVLYGIHPGQEKIIF--DTNLIPVISSVPQLTFYSKLMSCGVS 121
            E + LR     P     + +   PG            + + +        +   + G +
Sbjct: 114 GEALALRAAGVGPDRARVLTWLYPPGAPLRDLVEAHVDVSLAARWAVDEVVAAARAAGRT 173

Query: 122 HPYALQVDTGFNRLGLSLQEALDFT 146
               L VDTG  R G+   +  D  
Sbjct: 174 ARVHLAVDTGLGRNGIMPADLPDVL 198


>gi|218458070|ref|ZP_03498161.1| alanine racemase protein [Rhizobium etli Kim 5]
          Length = 73

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTNYDL 357
            + KG  +PI+G+++MD T  DIT      + +G  +++ GP+  LDDVA  +GT +Y++
Sbjct: 1   VYHKGIRLPIVGRVSMDSTTVDITALPEGALSLGSLVEVLGPNQTLDDVAGDAGTISYEI 60

Query: 358 LVRIGTRYAKFY 369
           L  +G RY + Y
Sbjct: 61  LTGLGDRYDRQY 72


>gi|70726513|ref|YP_253427.1| alanine racemase 2 [Staphylococcus haemolyticus JCSC1435]
 gi|68447237|dbj|BAE04821.1| alanine racemase 2 [Staphylococcus haemolyticus JCSC1435]
          Length = 358

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 79/349 (22%), Positives = 147/349 (42%), Gaps = 37/349 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D  A   N  ++   +GN+   AVVK+NAY  G E    +   AG+  F  TS++E +K
Sbjct: 7   VDKEAFLQN--AIKVKNGNS-IMAVVKNNAYHYGLEFAVTSFLKAGINTFSTTSLKEAIK 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++  +           +  ++P L +Y K  +        L+ + 
Sbjct: 64  VREIAPDATIFLMNAVYDFE-----KVRHYQIQMTLPSLAYYYKYKNDLSGIKVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      ++E L+  H + N+    +S + +H   AD+      S++ E +    
Sbjct: 119 LLHRSGFRTLEEIREVLNDHHINSNEDKMIISGLWTHFGYADEFDVPEYSIEREAWLNIV 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVT 237
            TL+      +   A +S            H    R GI+LYG       + + ++  +T
Sbjct: 179 DTLLDEGYHFDLIHAQNSASYYREGQKLLPHHTHARVGIALYGSRPYSALNEYSIKQSLT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +  +I +R+  AG+   Y    + TRD   +AV  +GY DG   +              
Sbjct: 239 VKGNVIQVREVNAGDNCGYSFAFEATRDHTRLAVVDVGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
             +  IKG   PI   + M     ++ + +  +  D + ++  DI++D+
Sbjct: 287 KHEALIKGKRYPIR-ALMMSHMFVEVDEEVDAQ--DEVILYNNDIRIDE 332


>gi|242373698|ref|ZP_04819272.1| alanine racemase 2 [Staphylococcus epidermidis M23864:W1]
 gi|242348666|gb|EES40268.1| alanine racemase 2 [Staphylococcus epidermidis M23864:W1]
          Length = 358

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 74/350 (21%), Positives = 134/350 (38%), Gaps = 37/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D  A   N  ++          AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VDTEAFYQNAVNVRNEQP---IMAVVKNNAYHYGLEFAVKQFLKAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++      + +  +   + S+     Y + +         L+ + 
Sbjct: 64  VREIAPHATIFLMNAVY--DFDTVREYQIHMTLPSLVYYYEYKEDL---KGIHVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      L E L+    + N +   +S + +H   AD+       ++ E +    
Sbjct: 119 LLHRSGFKNLDELHEVLEDHAQNDNSEKMIISGLWTHFGYADEFDVPEYGIEREAWLNVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVT 237
            TL+      E   A +S            +    R GI+LYG           +Q  +T
Sbjct: 179 NTLLEEGYTFEMIHAQNSASYYREGQQVLPYHTHARVGIALYGSRPYRKLDTSRIQQSLT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +  +I  R+  AG+   Y    + T+D   +AV  +GY DG   +              
Sbjct: 239 VKGNVIQTREVNAGDYCGYSFAFEATKDHTRLAVVDVGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
             +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 287 RHEAMINGKRYPIR-ALMMSHMFVEVDDEVHAQ--DEVVLYNNDIRIDEF 333


>gi|314936455|ref|ZP_07843802.1| alanine racemase family protein [Staphylococcus hominis subsp.
           hominis C80]
 gi|313655074|gb|EFS18819.1| alanine racemase family protein [Staphylococcus hominis subsp.
           hominis C80]
          Length = 357

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 132/348 (37%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D      N   +     N    AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VDSKIFLRNATKVKN---NQSIMAVVKNNAYHYGLEFAVRTFLEAGIHTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++        +  +     ++P L +Y +  S        L+ + 
Sbjct: 64  VRKLAPHATIFLMNAVYDFDTVRNNNIQM-----TLPSLEYYYQYKSELKDINVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKL--GQLSLIISHLACADDPSSHVNSVQLERF----R 183
             +R G  +L E  +  H+  N       +  + +H   AD+       ++ E +     
Sbjct: 119 LLHRSGFKNLDEIKEVLHHHENDNGSKMNIVGLWTHFGYADEFDVPEYGIEREAWLNVVN 178

Query: 184 TLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
           TL++     E   A +S            +    R GI+LYG         H ++  +T 
Sbjct: 179 TLLNEGYQFELIHAQNSASYYREGQQLLPYHTHARVGIALYGSRPYSKLDEHEIEQALTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +  +I +R+   G+   Y    +   D   +AV  IGY DG                   
Sbjct: 239 KGNVIQVREVNKGDYCGYSFAFEAMHDHTHLAVVDIGYGDGILKK------------RAT 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++ D +  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDDDVHAQ--DEVILYNNDIRIDE 331


>gi|228476139|ref|ZP_04060847.1| alanine racemase 2 [Staphylococcus hominis SK119]
 gi|228269962|gb|EEK11442.1| alanine racemase 2 [Staphylococcus hominis SK119]
          Length = 357

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 74/348 (21%), Positives = 132/348 (37%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D      N   +     N    AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VDSKIFLRNATKVKN---NQSIMAVVKNNAYHYGLEFAVRTFLEAGIHTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++        +  +     ++P L +Y +  S        L+ + 
Sbjct: 64  IRKLAPHATIFLMNAVYDFDTVRNNNIQM-----TLPSLEYYYQYKSELKDINVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKL--GQLSLIISHLACADDPSSHVNSVQLERF----R 183
             +R G  +L E  +  H+  N       +  + +H   AD+       ++ E +     
Sbjct: 119 LLHRSGFKNLDEIKEVLHHHENDNGSKMNIVGLWTHFGYADEFDVPEYGIEREAWLNVVN 178

Query: 184 TLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINK-SHPMQTVVTA 238
           TL++     E   A +S            +    R GI+LYG         H ++  +T 
Sbjct: 179 TLLNEGYQFELIHAQNSASYYREGQQLLPYHTHARVGIALYGSRPYSKLGEHEIEQALTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +  +I +R+   G+   Y    +   D   +AV  IGY DG                   
Sbjct: 239 KGNVIQVREVNKGDYCGYSFAFEAMHDHTHLAVVDIGYGDGILKK------------RAT 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++ D +  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDDDVHAQ--DEVILYNNDIRIDE 331


>gi|218516484|ref|ZP_03513324.1| alanine racemase protein [Rhizobium etli 8C-3]
          Length = 189

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLY--GGTDKINKSHPMQTVVTAEARIIL 244
             + G   S A+S G+ LG  YH  L RP  +    G T     ++PM+ VV  +  ++ 
Sbjct: 5   DEFPGFNISFANSGGVFLGDAYHGVLARPRHTPLYGGRTITPAGTNPMEPVVRLDVAVVQ 64

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
            R   +G  + YGG     R++ +A  A GYADG P +L    +            + KG
Sbjct: 65  TRTVPSGARIGYGGAHVTRRETRLATIAAGYADGLPRSLGDCSA-----------VYHKG 113

Query: 305 YMVPILGKITMDMTMFDITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN 354
             +PI+G+++MD    DIT      + +G  +++ GP+  L+DVA A+GT +
Sbjct: 114 IRLPIIGRVSMDSATVDITALPEGALRLGSLVEVLGPNQTLEDVAGAAGTIS 165


>gi|261883963|ref|ZP_06008002.1| alanine racemase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 235

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/222 (31%), Positives = 100/222 (45%), Gaps = 23/222 (10%)

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G   P  LQ DTG +RLGLS +E      N        +   ISHLA  D+P + VN+ Q
Sbjct: 19  GKKLPALLQFDTGMSRLGLSAKEFDRLLENVTLLSRIDIKFAISHLANGDEPGNAVNARQ 78

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS--------- 229
           L +   L++    + A+LA+S G  LG  Y+F L RPGI+LYG   +             
Sbjct: 79  LAKMTALLARLPKLPAALANSGGTFLGKTYYFDLARPGIALYGIDPERQHDFSDKVAHEN 138

Query: 230 ----HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
               H +  V+T  AR+I +R    G  V YGG         IA  A+GYADG   +LS 
Sbjct: 139 KKPKHSILPVLTLSARVIQVRDVDKGATVGYGGTYVANGPMRIATIAVGYADGLVRSLSN 198

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS 327
                  +             +PI+G++++D    D+T    
Sbjct: 199 KGRRPFSA----------NTRLPIIGRVSIDSITLDVTSLPE 230


>gi|33322502|gb|AAQ06978.1|AF496305_1 alanine racemase [Lactobacillus delbrueckii subsp. lactis]
          Length = 99

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 4  NEFLRLKIDLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
          N    L I+L A+K N       L    +   VVK NAYG G  ++AP +  AG   F V
Sbjct: 5  NRPAALHINLAAIKENTRQAKDHLKPGQKLFCVVKANAYGHGASRLAPVMEEAGADGFCV 64

Query: 63 TSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            ++EG++LR       I V          
Sbjct: 65 AMLDEGLELRRAQIVKPILVXGLQPXEXAA 94


>gi|73662660|ref|YP_301441.1| alanine racemase 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495175|dbj|BAE18496.1| alanine racemase 2 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 357

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/345 (19%), Positives = 135/345 (39%), Gaps = 28/345 (8%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++    K N  ++     + +  AVVK+NAY  G E       + G+  F  TS++E ++
Sbjct: 7   VNRQLFKENAKNVKQ---DNQIMAVVKNNAYHYGLEFAVEQFLDIGINTFSTTSLKEAIR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++   +KI  +   + + S        + L    V   Y   +  
Sbjct: 64  IRKLAPNATIFLMNAVY-EFDKIRENQIQMTLPSLSFYYENINDLYDIQVHLEYENLLHR 122

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI---- 186
              +    ++E +   + + N+    +S + +H   AD+      +++   +  ++    
Sbjct: 123 SGLKTLDEIKEVIHHHNQNKNEHKMHISGLWTHFGYADEFDVPDYNIERAAWLEIVDTLL 182

Query: 187 SHYKGIEASLASSSGILLGPN---YHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEARI 242
                 E   A +S           +    R GI+LYG           +Q  +T +  +
Sbjct: 183 DEGYEFEMIHAQNSASYYREQGVLPNHTHARIGIALYGSRPYSTINESDIQQSLTVKGNV 242

Query: 243 ILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           I +R+  AGE   Y    + T+++  +AV  +GY DG                    +  
Sbjct: 243 IQVREVNAGEFCGYSFAFEATKNNTKLAVVDVGYGDGIL------------KARAQHEAL 290

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
           I     PI   + M     ++ DS++ +  D + ++   I++D+ 
Sbjct: 291 INHKRYPIR-ALMMSHMFVEVDDSVNAQ--DEVILYNNHIRVDEF 332


>gi|289550806|ref|YP_003471710.1| Putative alternative form of diaminopimelate epimerase
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180338|gb|ADC87583.1| Putative alternative form of diaminopimelate epimerase
           [Staphylococcus lugdunensis HKU09-01]
          Length = 358

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 132/350 (37%), Gaps = 37/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++     NN  ++     N    AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VNSDIFFNNVVTVKN---NQPIMAVVKNNAYHYGLEYAVNMFLKAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P+A IF++  ++          ++     ++P L +Y    S        L+ + 
Sbjct: 64  IRKLAPKATIFLMNAVYDFDIVRHNRIHM-----TLPSLQYYYANKSNLYDINVHLEYEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      L+E L     +       ++ + +H   AD+        +   +    
Sbjct: 119 LLHRSGFKNLSELREVLKDHEQNNQPHKMHITGLWTHFGYADEFDVPEYDTEKRAWLKVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKIN-KSHPMQTVVT 237
            TL++     +   A +S            +    R GI+LYG     + K   ++  +T
Sbjct: 179 NTLLAEGYTFDMIHAQNSASFYREQHQVLSNHTHARVGIALYGSRPYSSLKPSEIKQALT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLT-RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +A +I +R+   G+   Y    +     + +AV  IGY DG   +              
Sbjct: 239 VKANVIQVREVNKGDYCGYSFAYECKNHHTRLAVVDIGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                I G   PI   + M     ++ + +     D + ++  DI++D+ 
Sbjct: 287 QHDVIINGKRYPIR-ALMMSHMFVEVDELVHAR--DEVVLYNNDIRIDEF 333


>gi|256026743|ref|ZP_05440577.1| alanine racemase [Fusobacterium sp. D11]
 gi|289764740|ref|ZP_06524118.1| alanine racemase [Fusobacterium sp. D11]
 gi|289716295|gb|EFD80307.1| alanine racemase [Fusobacterium sp. D11]
          Length = 359

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 135/378 (35%), Gaps = 33/378 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKDALYHNIEYLREY-KQKELLPVIKANAYGHNSLLIAKALYDFNLKTW 57

Query: 61  FVTSVEEGVKLRLY-----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            V    E + +  Y     +      +++         +     I    ++  +      
Sbjct: 58  AVARFSEAISITEYMMNNFSINDFKILVFESLNDDYSFLEKYPQICP--TINSIKDLKNA 115

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           ++  +     +L++D GF R G+  +E  +  +      L  LS+     + +      V
Sbjct: 116 LANNIPIDRLSLKIDFGFGRNGVKEEEVDELKNLIKFNSLKFLSIFSHLFSASYTDGLEV 175

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                      +         L +++GI           R G+  YG  +       ++ 
Sbjct: 176 IRK-FTEVVNKLGRNNFQMIHLQNAAGIYNYDVEVVTHIRTGMLTYGLQEAGFYDLDLKP 234

Query: 235 VVTAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           V T     +  +R     + V+Y        +   IA   IGY DG+             
Sbjct: 235 VFTGLIGYVDSVRYVNELDYVAYEDLSSISPKTKKIAKIKIGYGDGFL------------ 282

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    IK     I+ ++TMD T  ++ D   + VGD + ++    + +++ L +G 
Sbjct: 283 KANNKTTCLIKKKEY-IISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKLRTGI 336

Query: 353 TNYDLLVRIGT-RYAKFY 369
           +  + L+ I   R  + +
Sbjct: 337 SMLEFLIAISPLRVKRIF 354


>gi|260494827|ref|ZP_05814957.1| alanine racemase [Fusobacterium sp. 3_1_33]
 gi|260197989|gb|EEW95506.1| alanine racemase [Fusobacterium sp. 3_1_33]
          Length = 359

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 67/378 (17%), Positives = 136/378 (35%), Gaps = 33/378 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKDALYHNIEYLREY-KQKELLPVIKANAYGHNSLLIAKALYDFNLKTW 57

Query: 61  FVTSVEEGVKLRLY-----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            V    E + +  Y     +      +++         +   + I    ++  +      
Sbjct: 58  AVARFSEAISITEYMMNNFSINDFKILVFESLNDDYSFLEKYSQICP--TINSIKDLKNA 115

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           ++  +     +L++D GF R G+  +E  +  +      L  LS+     + +      V
Sbjct: 116 LANNIPIDRLSLKIDFGFGRNGVKEEEVDELKNLIKFNSLKFLSIFSHLFSASYTDGLEV 175

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                      +         L +++GI           R G+  YG  +       ++ 
Sbjct: 176 IRK-FTEVVNKLGRNNFQMIHLQNAAGIYNYDVEVVTHIRTGMLTYGLQEAGFYDLDLKP 234

Query: 235 VVTAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           V T     +  +R     + V+Y        +   IA   IGY DG+             
Sbjct: 235 VFTGLIGYVDSVRYVNELDYVAYEDLSSISPKTKKIAKIKIGYGDGFL------------ 282

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    IK     I+ ++TMD T  ++ D   + VGD + ++    + +++ L +G 
Sbjct: 283 KANNKTTCLIKKKEY-IISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKLRTGI 336

Query: 353 TNYDLLVRIGT-RYAKFY 369
           +  + L+ I   R  + +
Sbjct: 337 SMLEFLIAISPLRVKRIF 354


>gi|315658301|ref|ZP_07911173.1| alanine racemase [Staphylococcus lugdunensis M23590]
 gi|315496630|gb|EFU84953.1| alanine racemase [Staphylococcus lugdunensis M23590]
          Length = 358

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 70/350 (20%), Positives = 132/350 (37%), Gaps = 37/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++     NN  ++     N    AVVK+NAY  G E        AG+  F  TS++E V+
Sbjct: 7   VNSDIFFNNVVTVKN---NQPIMAVVKNNAYHYGLEYAVNMFLKAGINTFSTTSLKEAVR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P+A IF++  ++          ++     ++P L +Y    S        L+ + 
Sbjct: 64  IRKLAPKATIFLMNAVYDFDIVRHNRIHM-----TLPSLQYYYANKSNLYDINVHLEYEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      L+E L     +       ++ + +H   AD+        +   +    
Sbjct: 119 LLHRSGFKNLSELREVLKDHAQNNQPHKMHITGLWTHFGYADEFDVPEYDTEKRAWLKVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKIN-KSHPMQTVVT 237
            TL++     +   A +S            +    R GI+LYG     + K   ++  +T
Sbjct: 179 NTLLAEGYTFDMIHAQNSASFYREQHQVLSNHTHARVGIALYGSRPYSSLKPSEIKQALT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLT-RDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +A +I +R+   G+   Y    +     + +AV  IGY DG   +              
Sbjct: 239 VKANVIQVREVNKGDYCGYSFAYECKNHHTRLAVVDIGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
                I G   PI   + M     ++ + +     D + ++  DI++D+ 
Sbjct: 287 QHDVIINGKRYPIR-ALMMSHMFVEVDELVHAR--DEVVLYNNDIRIDEF 333


>gi|332654849|ref|ZP_08420591.1| putative alanine racemase [Ruminococcaceae bacterium D16]
 gi|332516192|gb|EGJ45800.1| putative alanine racemase [Ruminococcaceae bacterium D16]
          Length = 355

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 72/349 (20%), Positives = 128/349 (36%), Gaps = 31/349 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCE--------KIAPALYNAGV 57
             RL I+ +A++NN   +   +  A          YG+           ++A  L +AGV
Sbjct: 1   MRRLIIERSAIRNNMAVIKERAQGAAL--------YGVVSGQGGGVGAVRLARLLRDAGV 52

Query: 58  QDFFVTSVEEGVKLRLYTPQARI--FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
             F V SVEE   LR    +      +   +   + + + D +++  +SSV      + +
Sbjct: 53  TRFGVNSVEEAQLLRESGFETEEILMLRSTVDREELEQLVDLSVVCTVSSVDTGLALNAV 112

Query: 116 MSCGVS-HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                +     +QVDTG    G  + E         +     LS I + L  A    S  
Sbjct: 113 AENRSTVAEAHIQVDTGLGFGGFLISEPEKILLAYRSLPNVALSGIYTQL-HAVTGKSQE 171

Query: 175 NSVQLERFRTLISHYKGI-----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              QL++F+ ++               A S  ++   +      R G ++ G   +    
Sbjct: 172 VDGQLKQFQQVLEAIHQAGFETGTVHAAGSFALMHFDDARLDAVRAGSAILGRCRRTKGD 231

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSG 285
             + TV   EA I  +R    G  V       + + + +AV  +GY +G+    P + S 
Sbjct: 232 -GLTTVGYGEASITEVRWLPKGHTVGADKLITMKKPTRVAVLPVGYQNGFGVERPRSQSL 290

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
           L+   +          + G  V ++G I    T+ ++TD      GD  
Sbjct: 291 LELWRAWRRSRNRTVRLNGQRVRVIGSIGASETILNVTDV-KCSAGDVA 338


>gi|78776580|ref|YP_392895.1| alanine racemase [Sulfurimonas denitrificans DSM 1251]
 gi|78497120|gb|ABB43660.1| Alanine racemase [Sulfurimonas denitrificans DSM 1251]
          Length = 338

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 65/352 (18%), Positives = 130/352 (36%), Gaps = 58/352 (16%)

Query: 31  RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
           + A V+KDNAYG G  +++      G++   V         R     A  F  Y +  G 
Sbjct: 27  KIALVLKDNAYGHGLVEMSSMAKEYGIKR-AVVRTH-----REAEI-AESFFSYILVLGD 79

Query: 91  EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
              +    +   I+ +  +  +             L++D+G +R G+++ E  +      
Sbjct: 80  IPTMVSKTIRYTINDLESIDKF------PKETRVELKIDSGMHRNGIAIDEIEE-AFIKI 132

Query: 151 NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS---------HYKGIEASLASSSG 201
             +   L  + +H   AD+ +S     Q + F               +  +    ++S+ 
Sbjct: 133 KARGLLLEGLFTHHRSADELTSEWF-WQKKNFEDAKRIAKELAIKYGFAPLRFHSSNSAA 191

Query: 202 ILLGPNYHFQLTRPGISLYGGT--DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQ 259
           +    ++   + R GI+ YG     K       + V++  A+ +  RK  + + V YGG 
Sbjct: 192 LFRNASFDEDMARVGIAAYGCMTLPKPLHVDGFKPVLSLWAKKLSSRKLKSHQRVGYGGD 251

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVP----ILGKITM 315
            ++  D +++    GY +G+                        GY  P    ++G+I+M
Sbjct: 252 GEILSDGVVSNYDFGYGEGFLR------------------VCANGYKTPEGIELIGRISM 293

Query: 316 DMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAK 367
           D       +S  +   D + IF        VA  + T +Y++L  +     +
Sbjct: 294 D-------NSSFLSSKDKLLIFD---SALHVATYASTISYEVLTSLKPEIKR 335


>gi|255030944|ref|ZP_05302895.1| hypothetical protein LmonL_20763 [Listeria monocytogenes LO28]
          Length = 199

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 19/209 (9%)

Query: 121 SHPYALQVDTGFNRLGLSL-QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL 179
           +    L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL
Sbjct: 3   TLRIHLKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQL 62

Query: 180 ERFRTLISHYKGIEASLA--SSSGILLGPNYHFQLTRPGISLYGGTDKIN----KSHPMQ 233
            +F+T+++  K     +   +S+  LL P   F   R GIS+YG T            ++
Sbjct: 63  AKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFGISMYGLTPSTEIKTSLPFELK 122

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +     ++ +++   G+ VSYG     T    +A   IGYADG     SG        
Sbjct: 123 PALALYTEMVHVKELAPGDSVSYGATYTATEREWVATLPIGYADGLIRHYSGF------- 175

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDI 322
                   + G + PI+G++ MD T+  +
Sbjct: 176 -----HVLVGGELAPIIGRVCMDQTIIKL 199


>gi|254304083|ref|ZP_04971441.1| alanine racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148324275|gb|EDK89525.1| alanine racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 359

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 139/378 (36%), Gaps = 33/378 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKDALYHNIEYLREY-KQKELLPVIKANAYGHNSLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRLY-----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            V    E + +  Y     +      +++         +     I    ++  +      
Sbjct: 58  AVARFSEAITIIEYMMDNFSINDFKILVFESLGDDYSFLEKYPEICP--TINSIKDLKNA 115

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           ++  +S    +L++D GF R G+  +E  +   N       +   I SHL  A       
Sbjct: 116 LANNISIDRLSLKIDFGFGRNGIKAEEVDEL-KNLIKFNSLKFLGIFSHLFSATYTDGLE 174

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
              +     + +         L +++GI           R G+  YG  +     H ++ 
Sbjct: 175 VIKKFTEVVSKLGRDNFEMVHLQNAAGIYNYDVDVVTHIRTGMLTYGLQEAGFYDHDLKP 234

Query: 235 VVTAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           V T     +  +R     + V+Y        +   IA   IGY DG+P            
Sbjct: 235 VFTGLIGFVDSVRYVSELDYVAYEDLSSISPKTKKIAKIKIGYGDGFP------------ 282

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    IK     ++ ++TMD T  ++ D   + VGD + ++    + +++ + +G 
Sbjct: 283 KANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKMRTGL 336

Query: 353 TNYDLLVRIGT-RYAKFY 369
           +  + L+ I   R  + +
Sbjct: 337 SMLEALIAISPLRIKRIF 354


>gi|237745050|ref|ZP_04575531.1| alanine racemase [Fusobacterium sp. 7_1]
 gi|229432279|gb|EEO42491.1| alanine racemase [Fusobacterium sp. 7_1]
          Length = 359

 Score =  107 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 135/378 (35%), Gaps = 33/378 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKDALYHNIEYLREY-KQKELLPVIKANAYGHNSLLIAKALYDFNLKTW 57

Query: 61  FVTSVEEGVKLRLY-----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            V    E + +  Y     +      +++         +     I    ++  +      
Sbjct: 58  AVARFSEAISITEYMMNNFSINDFKILVFESLNDDYSFLEKYPQICP--TINSIKDLKNA 115

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           ++  +     +L++D GF R G+  +E  +  +      L  LS+     + +      V
Sbjct: 116 LANNIPIDRLSLKIDFGFGRNGVKEEEVDELKNLIKFNSLKFLSIFSHLFSASYTDGLEV 175

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                      +         L +++GI           R G+  YG  +       ++ 
Sbjct: 176 IRK-FTEVVNKLGRNNFQMIHLQNAAGIYNYDVEVVTHVRTGMLTYGLQEAGFYDLDLKP 234

Query: 235 VVTAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           V T     +  +R     + V+Y        +   IA   IGY DG+             
Sbjct: 235 VFTGLIGYVDSVRYVNELDYVAYEDLSSISPKTKKIAKIKIGYGDGFL------------ 282

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    IK     ++ ++TMD T  ++ D   + VGD + ++    + +++ L +G 
Sbjct: 283 KANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKLRTGI 336

Query: 353 TNYDLLVRIGT-RYAKFY 369
           +  + L+ I   R  + +
Sbjct: 337 SMLEFLIAISPLRVKRIF 354


>gi|297518400|ref|ZP_06936786.1| alanine racemase [Escherichia coli OP50]
          Length = 72

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 37/68 (54%)

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLL 358
              + G     +G ++MDM   D+T      +G  ++++G +IK+DDVA A+GT  Y+L+
Sbjct: 1   PVLVDGVRTMTVGTVSMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELM 60

Query: 359 VRIGTRYA 366
             +  R  
Sbjct: 61  CALALRVP 68


>gi|314933577|ref|ZP_07840942.1| alanine racemase family protein [Staphylococcus caprae C87]
 gi|313653727|gb|EFS17484.1| alanine racemase family protein [Staphylococcus caprae C87]
          Length = 358

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 73/350 (20%), Positives = 138/350 (39%), Gaps = 37/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D      N   +          AVVK+NAY  G E        AG+Q F  TS++E ++
Sbjct: 7   VDTEVFYQNAVKVRN---EQSIMAVVKNNAYHYGLEFSVKEFLKAGIQTFSTTSLKEAIR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++       ++ ++     ++P LT+Y +      +    L+ + 
Sbjct: 64  VREIAPHATIFLMNAVYEFDTVREYEIHM-----TLPSLTYYYEHKEDLRNIHVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
             +R G      L E L+    + +     +S I +H   AD+       ++ + +  ++
Sbjct: 119 LLHRSGFKDLEELHEVLEDHAQNKSDNKMIISGIWTHFGYADEFDVPEYDIERQAWLNVL 178

Query: 187 S----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKIN-KSHPMQTVVT 237
           +         +   A +S            H    R GI+LYG       K   +Q  +T
Sbjct: 179 NTLLGEGYSFDMIHAQNSASFYREGQVVLPHHTHARVGIALYGSRPYSKLKESEIQQSLT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +  +I +R+  AG+   Y    + T++   +AV  IGY DG   +              
Sbjct: 239 VKGNVIQVREVNAGDYCGYSFAYEATKNQTQLAVVDIGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
             +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 287 QHEAIINGKRYPIR-ALMMSHMFVEVDDEVHAQ--DEVVLYNNDIRIDEF 333


>gi|319892398|ref|YP_004149273.1| Putative diaminopimelate epimerase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162094|gb|ADV05637.1| Putative diaminopimelate epimerase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 359

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 73/341 (21%), Positives = 134/341 (39%), Gaps = 35/341 (10%)

Query: 20  WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR 79
             ++  ++ N    AVVK+NAY  G +        AG+  F  TS+ E V++R   P+A 
Sbjct: 13  LQNVKQVTQNQSVMAVVKNNAYNYGLDFAVQMFQQAGIDTFSTTSLVEAVRIRELAPEAT 72

Query: 80  IFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSL 139
           IF+   ++   E      N I +  ++P LTFY +  +        L+ +   +R G   
Sbjct: 73  IFL---MNATDEFERLRANDIHM--TLPSLTFYRENKAALAGVKVHLEYENLLHRSGFKT 127

Query: 140 QEALDFTHNSFNKKL---GQLSLIISHLACADDPSSHVNSVQLERFRTLIS------HYK 190
           ++ L        +      +++ + +H   AD+    +   + E + T++        Y 
Sbjct: 128 KDELLAVLADHEQNPAPKMEITGLWTHFGYADEFDVDMYEKEREAWLTIVETLVKQRGYH 187

Query: 191 GIEASLASSSGILLGPNYHFQLT---RPGISLYGGTDKINKSHPMQTV-VTAEARIILIR 246
                  +S+         F      R GI+LYG     + S    T  +T +A +I +R
Sbjct: 188 FDLIHAQNSASYYREGQRVFDHHTHARIGIALYGSRPYASLSPGCITQALTVKANVIQLR 247

Query: 247 KALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
               G+   Y     + +    +AV  +GY DG   T                   I G 
Sbjct: 248 NVQQGDHCGYSFAYTVEQPHTRLAVVDVGYGDGILRT------------RAQHDVSINGK 295

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDD 345
             PI   + M     ++ D++S +  D + ++   D+++DD
Sbjct: 296 RYPIR-ALMMSHMFVEVDDTVSAK--DSVILYNNSDLRIDD 333


>gi|223043272|ref|ZP_03613319.1| alanine racemase 2 [Staphylococcus capitis SK14]
 gi|222443483|gb|EEE49581.1| alanine racemase 2 [Staphylococcus capitis SK14]
          Length = 358

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 75/350 (21%), Positives = 138/350 (39%), Gaps = 37/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D      N   +          AVVK+NAY  G E        AG+Q F  TS++E ++
Sbjct: 7   VDTEVFYQNAVKVRN---EQSIMAVVKNNAYHYGLEFSVKEFLKAGIQTFSTTSLKEAIR 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++       ++ ++     ++P LT+Y +      +    L+ + 
Sbjct: 64  VREIAPHATIFLMNAVYEFDTVREYEIHM-----TLPSLTYYYEHKEDLRNIHVHLEFEN 118

Query: 131 GFNRLGLS----LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF---- 182
             +R G      L E L+    + +     +S I +H   AD+       ++ + +    
Sbjct: 119 LLHRSGFKDLEELHEVLEDHAQNKSDNKMIISGIWTHFGYADEFDVPEYDIERQAWLNVL 178

Query: 183 RTLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKIN-KSHPMQTVVT 237
            TL+      +   A +S            H    R GI+LYG       K   +Q  +T
Sbjct: 179 NTLLDEGYSFDLIHAQNSASFYREGQVVLPHHTHARVGIALYGSRPYSKLKESEIQQSLT 238

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
            +  +I +R+  AG+   Y    + T++   +AV  IGY DG   +              
Sbjct: 239 VKGNVIQVREVNAGDYCGYSFAYEATKNQTQLAVVDIGYGDGILKS------------RA 286

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDV 346
             +  I G   PI   + M     ++ D +  +  D + ++  DI++D+ 
Sbjct: 287 QHEAIINGKRYPIR-ALMMSHMFVEVDDEVHAQ--DEVVLYNNDIRIDEF 333


>gi|19703826|ref|NP_603388.1| alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19713976|gb|AAL94687.1| Alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 359

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 64/378 (16%), Positives = 133/378 (35%), Gaps = 33/378 (8%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKNALYHNIEYLREY-KQKELLPVIKANAYGHNYLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRLY-----TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
                 E + +  Y     +      +++         +     I    ++  +      
Sbjct: 58  AAARFSEAITITEYMMNNFSINDFKILVFESLDDDYSFLEKYPQICP--TINSIKDLKNA 115

Query: 116 MSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           ++  +     +L++D GF R G+  +E  +  +      L  L +     +        V
Sbjct: 116 LANNIPIDRLSLKIDFGFGRNGIKTEEVDELKNLIKFNSLKFLGIFSHLFSSTYTDGLEV 175

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                      +         L +++GI           R G+  YG  +     H ++ 
Sbjct: 176 IRK-FTEVVNKLGKDNFEMVHLQNAAGIYNYNVEVVTHIRTGMLTYGLQEAGFYDHDLKP 234

Query: 235 VVTAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSP 292
           V T     +  +R     + V+Y        +   IA   IGY DG+P            
Sbjct: 235 VFTGLIGYVDSVRYVNELDYVAYEDLTSISPKTKKIAKIKIGYGDGFP------------ 282

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
                    IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G 
Sbjct: 283 KANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKTRTGL 336

Query: 353 TNYDLLVRIGT-RYAKFY 369
           +  + L+ +   R  + +
Sbjct: 337 SMLEALIALSPLRVKRIF 354


>gi|323464498|gb|ADX76651.1| alanine racemase 2 [Staphylococcus pseudintermedius ED99]
          Length = 359

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 74/341 (21%), Positives = 135/341 (39%), Gaps = 35/341 (10%)

Query: 20  WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR 79
             ++  ++ N    AVVK+NAY  G +        AG+  F  TS+ E V++R   P+A 
Sbjct: 13  LQNVKQVTQNQSVMAVVKNNAYNYGLDFAVQMFQQAGIDTFSTTSLVEAVRIRELAPEAT 72

Query: 80  IFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSL 139
           IF+   ++   E      N I +  ++P LTFY +  +        L+ +   +R G   
Sbjct: 73  IFL---MNATDEFERLRANDIHM--TLPSLTFYRENKAALAGVKVHLEYENLLHRSGFKT 127

Query: 140 QEALDFT---HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS------HYK 190
           ++ L      H        +++ + +H   AD+    ++  + E + T++        Y 
Sbjct: 128 KDELLAVLADHEQNPAPKMEITGLWTHFGYADEFDVDMHEKEREAWLTIVETLVKQRGYH 187

Query: 191 GIEASLASSSGILLGPNYHFQLT---RPGISLYGGTDKINKSHPMQTV-VTAEARIILIR 246
                  +S+         F      R GI+LYG     + S    T  +T +A +I +R
Sbjct: 188 FDLIHAQNSASYYREGQRVFDHHTHARIGIALYGSRPYASLSPGCITQALTVKANVIQVR 247

Query: 247 KALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
               G+   Y     + +    +AV  +GY DG   T                   I G 
Sbjct: 248 NVQQGDHCGYSFAYTVEQPHTRLAVVDVGYGDGILRT------------RAQHDVSINGK 295

Query: 306 MVPILGKITMDMTMFDITDSLSIEVGDYIQIF-GPDIKLDD 345
             PI   + M     ++ D++S +  D + ++   D+++DD
Sbjct: 296 RYPIR-ALMMSHMFVEVDDTVSAK--DSVILYNNSDLRIDD 333


>gi|239943636|ref|ZP_04695573.1| putative alanine racemase [Streptomyces roseosporus NRRL 15998]
          Length = 92

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 33/84 (39%)

Query: 6  FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            R +IDL AL+ N   +   +  A+  AVVK + YG G    A A   AG       + 
Sbjct: 8  RARAEIDLAALRANVRVLRERAAGAQLMAVVKSDGYGHGAVPCARAARAAGATWLGTATP 67

Query: 66 EEGVKLRLYTPQARIFVLYGIHPG 89
           E + LR      RI        G
Sbjct: 68 HEALALRAAGLDGRILCWLWTPGG 91


>gi|296328819|ref|ZP_06871332.1| alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154050|gb|EFG94855.1| alanine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 359

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 131/376 (34%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKNALYHNIEYLREY-KQKELLPVIKANAYGHNYLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRL---YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
                 E + +            F +       +   F      +  ++  +      ++
Sbjct: 58  AAARFSEAITITEYMMNNFSINDFKILVFESLDDYYSFLEKYPQICPTINSIKDLKNALA 117

Query: 118 CGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +     +L++D GF R G+  +E  +  +      L  L +     +        V  
Sbjct: 118 NNIPIDRLSLKIDFGFGRNGIKAEEVDELKNLIKFNSLKFLGIFSHLFSSTYTDGLEVIR 177

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                    +         L +++GI           R G+  YG  +     H ++ V 
Sbjct: 178 K-FTEVVNKLGKDNFEMVHLQNAAGIYNYNVEVVTHIRTGMLTYGLQEAGFYDHDLKPVF 236

Query: 237 TAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           T     +  +R     + V+Y        +   IA   IGY DG+P              
Sbjct: 237 TGLIGYVDSVRYVNELDYVAYEDLTSISPKTKKIAKIKIGYGDGFP------------KA 284

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G + 
Sbjct: 285 NNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKTKTGLSM 338

Query: 355 YDLLVRIGT-RYAKFY 369
            + L+ +   R  + +
Sbjct: 339 LEALIALSPLRVKRIF 354


>gi|256844858|ref|ZP_05550316.1| alanine racemase [Fusobacterium sp. 3_1_36A2]
 gi|256718417|gb|EEU31972.1| alanine racemase [Fusobacterium sp. 3_1_36A2]
          Length = 359

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 131/376 (34%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKNALYHNIEYLREY-KQKELLPVIKANAYGHNYLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLY---GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
                 E + +  Y         +         +   F      +  ++  +      ++
Sbjct: 58  ATARFSEAITITEYMINNFSINDFKILVFESLDDDYSFLEKYPQICPTINSIKDLKNALA 117

Query: 118 CGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +     +L++D GF R G+  +E  +  +      L  L +     +        V  
Sbjct: 118 NNIPIDRLSLKIDFGFGRNGIKAEEVDELKNLIKFNSLKFLGIFSHLFSATYTDGLEVIR 177

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                    +         L +++GI           R G+  YG  +     H ++ V 
Sbjct: 178 K-FTEVVNKLGKDNFEMIHLQNAAGIYNYNVEVVTHIRTGMLTYGLQEAGFYDHDLKPVF 236

Query: 237 TAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           T     ++ +R     + V+Y        +   IA   IGY DG+               
Sbjct: 237 TGLIGYVVSVRYVNELDYVAYEDLSSINPKTKKIAKIKIGYGDGFL------------KA 284

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G + 
Sbjct: 285 NNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKTRTGLSM 338

Query: 355 YDLLVRIGT-RYAKFY 369
            + L+ +   R  + +
Sbjct: 339 LEALIALSPLRVKRIF 354


>gi|237741523|ref|ZP_04572004.1| alanine racemase [Fusobacterium sp. 4_1_13]
 gi|229429171|gb|EEO39383.1| alanine racemase [Fusobacterium sp. 4_1_13]
          Length = 359

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 131/376 (34%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKNALYHNIEYLREY-KQKELLPVIKANAYGHNYLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLY---GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
                 E + +  Y         +         +   F      +  ++  +      ++
Sbjct: 58  ATARFSEAITITEYMINNFSINDFKILVFESLDDDYSFLEKYPQICPTINSIKDLKNALA 117

Query: 118 CGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +     +L++D GF R G+  +E  +  +      L  L +     +        V  
Sbjct: 118 NNIPIDRLSLKIDFGFGRNGIKAEEVDELKNLIKFNSLKFLGIFSHLFSATYTDGLEVIR 177

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                    +         L +++GI           R G+  YG  +     H ++ V 
Sbjct: 178 K-FTEVVNKLGKDNFEMIHLQNAAGIYNYNVEVVTHIRTGMLTYGLQEAGFYDHDLKPVF 236

Query: 237 TAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           T     ++ +R     + V+Y        +   IA   IGY DG+               
Sbjct: 237 TGLIGYVVSVRYVNELDYVAYEDLSSINPKTKKIAKIKIGYGDGFL------------KA 284

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  IK     ++ ++TMD T  ++ D   + VGD + ++    K +++   +G + 
Sbjct: 285 NNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HKPNEMKTRTGLSM 338

Query: 355 YDLLVRIGT-RYAKFY 369
            + L+ +   R  + +
Sbjct: 339 LEALIALSPLRVKRIF 354


>gi|294785861|ref|ZP_06751149.1| alanine racemase [Fusobacterium sp. 3_1_27]
 gi|294487575|gb|EFG34937.1| alanine racemase [Fusobacterium sp. 3_1_27]
          Length = 359

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 132/376 (35%), Gaps = 29/376 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M+++ ++ L  D  AL +N   +           V+K NAYG     IA ALY+  ++ +
Sbjct: 1   MNTSFYVSL--DKNALYHNIEYLREY-KQKELLPVIKANAYGHNYLLIAKALYDFNIKTW 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLY---GIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
                 E + +  Y         +         +   F      +  ++  +      ++
Sbjct: 58  ATARFSEAITITEYMINNFSINDFKILVFESLDDDYSFLEKYPQICPTINSIKDLKNALA 117

Query: 118 CGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +     +L++D GF R G+  +E  +  +      L  L +     +        V  
Sbjct: 118 NNIPIDRLSLKIDFGFGRNGIKAEEVDELKNLIKFNSLKFLGIFSHLFSATYTDGLEVIR 177

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
                   L      +   L +++GI           R G+  YG  +     H ++ V 
Sbjct: 178 KFTGVVNKLGKDNFEM-IHLQNAAGIYNYNVEVVTHIRTGMLTYGLQEAGFYDHDLKPVF 236

Query: 237 TAE-ARIILIRKALAGELVSYGG-QKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
           T     ++ +R     + V+Y        +   IA   IGY DG+               
Sbjct: 237 TGLIGYVVSVRYVNELDYVAYEDLSSINPKTKKIAKIKIGYGDGFL------------KA 284

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTN 354
                  IK     ++ ++TMD T  ++ D   + VGD + ++    + +++   +G + 
Sbjct: 285 NNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDKVHLY---HRPNEMKTRTGLSM 338

Query: 355 YDLLVRIGT-RYAKFY 369
            + L+ +   R  + +
Sbjct: 339 LEALIALSPLRVKRIF 354


>gi|16417160|gb|AAL18607.1|AF384669_1 alanine racemase [Francisella novicida]
          Length = 210

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 23/205 (11%)

Query: 161 ISHLACADDPSSHVNSVQLERFRTLISHYKG----IEASLASSSGILLGPNYHFQLTRPG 216
            SHLACAD+     N  Q  RF +++   KG    I   L++S G L      + + RPG
Sbjct: 16  YSHLACADNRDHPTNIKQKNRFDSIVEFTKGLSQDIICHLSNSYGFLGQKGICYDMVRPG 75

Query: 217 ISLYGGTDKINKSHPMQ---TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAI 273
           I  YG   +      ++    +    ++++ I     GE V Y    +      +AV  I
Sbjct: 76  ILSYGFLPEFYVDRVIREIKPIARLLSKVVKIITLQEGEGVGYSLIYRGFEGEQLAVIPI 135

Query: 274 GYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDIT-DSLSIEVGD 332
           GY DG+P  L              G   I   M P+ G+++MD     +  +   ++V D
Sbjct: 136 GYGDGFPRELGDR-----------GFVNINDVMYPMAGRMSMDGLTVSLGINEYDVKVSD 184

Query: 333 YIQIFGPDI----KLDDVALASGTT 353
            +++             +A  + T 
Sbjct: 185 TVELISAIPRNRNSAFSIANQTNTI 209


>gi|82750990|ref|YP_416731.1| alanine racemase [Staphylococcus aureus RF122]
 gi|82656521|emb|CAI80943.1| probable alanine racemase [Staphylococcus aureus RF122]
          Length = 361

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 138/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    ++T+D+  +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|323441183|gb|EGA98890.1| alanine racemase [Staphylococcus aureus O11]
          Length = 363

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 68/350 (19%), Positives = 134/350 (38%), Gaps = 38/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           I+      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   INKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +++  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNIERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQTVV--- 236
                    +   A +S            H    R GI+LYG     + +     +V   
Sbjct: 179 ALLTEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHQHDIVQSL 238

Query: 237 TAEARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           T +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T             
Sbjct: 239 TVKAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------R 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
              +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 AKHEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 333


>gi|50954714|ref|YP_062002.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951196|gb|AAT88897.1| alanine racemase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 236

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           ++  HP +  +     I+ +++  A   VSYG   +  R S + + A+GYADG     S 
Sbjct: 100 LDPRHPSRLALRLVGEIVAVKRVAARRGVSYGYTYRTERPSTLVLVALGYADGLLRVASN 159

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DI 341
                       G   +      + G+I MD  + DI D+ ++  GD + +FG     + 
Sbjct: 160 R-----------GPVQVGTVRGRVSGRIAMDQFVVDIGDADTL-PGDPVVVFGDPGRGEP 207

Query: 342 KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            + D A A G     +  R+G R  + Y
Sbjct: 208 TVLDWADALGVAAPVITSRLGRRIERRY 235



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)

Query: 1  MHSNEFLR--LKIDLTALKNNW----HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN 54
          M     +R    IDL A+  N       +   + + R       +AYG G   +A  L +
Sbjct: 1  MTPAPGVRRHAHIDLDAIVANAISSGRPLTDSTADLRV------DAYGHGLIPVARVLSS 54

Query: 55 AGVQDFFVTSVEEGVKLRLYTPQARIFV 82
          AG   F V+ VE+   L       RI V
Sbjct: 55 AGTGGFLVSRVEDAATLADDGVPGRILV 82


>gi|302333011|gb|ADL23204.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 361

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 68/348 (19%), Positives = 134/348 (38%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E +K
Sbjct: 7   VNKKIFLQNAIAVKN---NQPIMAVVKNNAYHYDLEFAVSQFIHAGIDTFSTTSLREAIK 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  VRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVPDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 TLLFEGYQFDLIHAQNSASFYREGQELLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I + +  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KANVIQVHEVQAGDYCGYSFAFEVTKTNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|329733446|gb|EGG69778.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           21193]
          Length = 361

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 69/348 (19%), Positives = 138/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 SLLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    ++T+++  +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|318081155|ref|ZP_07988487.1| hypothetical protein SSA3_31755 [Streptomyces sp. SA3_actF]
          Length = 67

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 27/60 (45%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           R +IDL AL+ N   +   +  A   AVVK +AYG G    A A   AG     V +  
Sbjct: 8  PRAEIDLAALRANVRLLRERAPGAAFMAVVKADAYGHGALACARAAREAGASWLGVATPA 67


>gi|57651899|ref|YP_186286.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87161172|ref|YP_493989.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195126|ref|YP_499927.1| alanine racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|151221522|ref|YP_001332344.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509565|ref|YP_001575224.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221140626|ref|ZP_03565119.1| alanine racemase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258452194|ref|ZP_05700209.1| alanine racemase 2 [Staphylococcus aureus A5948]
 gi|262050354|ref|ZP_06023197.1| hypothetical protein SAD30_2197 [Staphylococcus aureus D30]
 gi|262053091|ref|ZP_06025262.1| hypothetical protein SA930_1088 [Staphylococcus aureus 930918-3]
 gi|282927786|ref|ZP_06335399.1| alanine racemase [Staphylococcus aureus A9765]
 gi|284024399|ref|ZP_06378797.1| alanine racemase [Staphylococcus aureus subsp. aureus 132]
 gi|294850734|ref|ZP_06791453.1| alanine racemase [Staphylococcus aureus A9754]
 gi|304381024|ref|ZP_07363679.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|20137472|sp|Q9EZ08|ALR2_STAA8 RecName: Full=Alanine racemase 2
 gi|81694524|sp|Q5HG21|ALR2_STAAC RecName: Full=Alanine racemase 2
 gi|57286085|gb|AAW38179.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus COL]
 gi|87127146|gb|ABD21660.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202684|gb|ABD30494.1| alanine racemase, putative [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374322|dbj|BAF67582.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368374|gb|ABX29345.1| alanine racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860131|gb|EEV82964.1| alanine racemase 2 [Staphylococcus aureus A5948]
 gi|259159014|gb|EEW44087.1| hypothetical protein SA930_1088 [Staphylococcus aureus 930918-3]
 gi|259161553|gb|EEW46152.1| hypothetical protein SAD30_2197 [Staphylococcus aureus D30]
 gi|269940894|emb|CBI49277.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282592040|gb|EFB97068.1| alanine racemase [Staphylococcus aureus A9765]
 gi|294822410|gb|EFG38860.1| alanine racemase [Staphylococcus aureus A9754]
 gi|302751228|gb|ADL65405.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340440|gb|EFM06379.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|315195911|gb|EFU26276.1| alanine racemase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140793|gb|EFW32642.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142185|gb|EFW34003.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314075|gb|AEB88488.1| Alanine racemase 2 [Staphylococcus aureus subsp. aureus T0131]
 gi|329725317|gb|EGG61801.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           21189]
          Length = 361

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 138/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTL 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    ++T+++  +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|253732036|ref|ZP_04866201.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724227|gb|EES92956.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 361

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVHAGDYCGYSFAFEVTKNNTKLAVIDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|15924389|ref|NP_371923.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926979|ref|NP_374512.1| hypothetical protein SA1231 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148267887|ref|YP_001246830.1| alanine racemase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393950|ref|YP_001316625.1| alanine racemase [Staphylococcus aureus subsp. aureus JH1]
 gi|156979718|ref|YP_001441977.1| hypothetical protein SAHV_1387 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315276|ref|ZP_04838489.1| hypothetical protein SauraC_03777 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253733354|ref|ZP_04867519.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006188|ref|ZP_05144789.2| hypothetical protein SauraM_06955 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795546|ref|ZP_05644525.1| alanine racemase [Staphylococcus aureus A9781]
 gi|258413354|ref|ZP_05681630.1| alanine racemase [Staphylococcus aureus A9763]
 gi|258420539|ref|ZP_05683481.1| alanine racemase [Staphylococcus aureus A9719]
 gi|258434689|ref|ZP_05688763.1| alanine racemase 2 [Staphylococcus aureus A9299]
 gi|258444735|ref|ZP_05693064.1| alanine racemase 2 [Staphylococcus aureus A8115]
 gi|258447430|ref|ZP_05695574.1| alanine racemase [Staphylococcus aureus A6300]
 gi|258449271|ref|ZP_05697374.1| alanine racemase 2 [Staphylococcus aureus A6224]
 gi|258454651|ref|ZP_05702615.1| alanine racemase 2 [Staphylococcus aureus A5937]
 gi|269203021|ref|YP_003282290.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282892892|ref|ZP_06301127.1| alanine racemase 2 [Staphylococcus aureus A8117]
 gi|282929363|ref|ZP_06336928.1| diaminopimelate epimerase [Staphylococcus aureus A10102]
 gi|295406346|ref|ZP_06816153.1| alanine racemase [Staphylococcus aureus A8819]
 gi|296275259|ref|ZP_06857766.1| alanine racemase [Staphylococcus aureus subsp. aureus MR1]
 gi|297244575|ref|ZP_06928458.1| diaminopimelate epimerase alternative form [Staphylococcus aureus
           A8796]
 gi|54036716|sp|P63483|ALR2_STAAN RecName: Full=Alanine racemase 2
 gi|54040681|sp|P63482|ALR2_STAAM RecName: Full=Alanine racemase 2
 gi|13701196|dbj|BAB42491.1| SA1231 [Staphylococcus aureus subsp. aureus N315]
 gi|14247170|dbj|BAB57561.1| Alanine racemase 2 [Staphylococcus aureus subsp. aureus Mu50]
 gi|147740956|gb|ABQ49254.1| Alanine racemase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946402|gb|ABR52338.1| Alanine racemase [Staphylococcus aureus subsp. aureus JH1]
 gi|156721853|dbj|BAF78270.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|253728622|gb|EES97351.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus TCH130]
 gi|257789518|gb|EEV27858.1| alanine racemase [Staphylococcus aureus A9781]
 gi|257839918|gb|EEV64386.1| alanine racemase [Staphylococcus aureus A9763]
 gi|257843487|gb|EEV67894.1| alanine racemase [Staphylococcus aureus A9719]
 gi|257849050|gb|EEV73032.1| alanine racemase 2 [Staphylococcus aureus A9299]
 gi|257850228|gb|EEV74181.1| alanine racemase 2 [Staphylococcus aureus A8115]
 gi|257853621|gb|EEV76580.1| alanine racemase [Staphylococcus aureus A6300]
 gi|257857259|gb|EEV80157.1| alanine racemase 2 [Staphylococcus aureus A6224]
 gi|257863034|gb|EEV85798.1| alanine racemase 2 [Staphylococcus aureus A5937]
 gi|262075311|gb|ACY11284.1| alanine racemase family protein [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589063|gb|EFB94165.1| diaminopimelate epimerase [Staphylococcus aureus A10102]
 gi|282764889|gb|EFC05014.1| alanine racemase 2 [Staphylococcus aureus A8117]
 gi|285817077|gb|ADC37564.1| Diaminopimelate epimerase [Staphylococcus aureus 04-02981]
 gi|294968934|gb|EFG44956.1| alanine racemase [Staphylococcus aureus A8819]
 gi|297178605|gb|EFH37851.1| diaminopimelate epimerase alternative form [Staphylococcus aureus
           A8796]
 gi|312829794|emb|CBX34636.1| alanine racemase, C-terminal domain protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315131207|gb|EFT87191.1| hypothetical protein CGSSa03_06679 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329727451|gb|EGG63907.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           21172]
          Length = 361

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|323444052|gb|EGB01663.1| alanine racemase [Staphylococcus aureus O46]
          Length = 363

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 138/350 (39%), Gaps = 38/350 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++  +  ++ +  +   + S+     +   ++        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVY--EFDLVLEHQIHMTLPSLTYYYNHKNDLA---GIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +++  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNIERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQTVV--- 236
                    +   A +S            H    R GI+LYG     + +     +V   
Sbjct: 179 ALLTEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHQHDIVQSL 238

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           T +A +I +R+  AG+   Y    ++T+++  +AV  IGY DG   T             
Sbjct: 239 TVKAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------R 286

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
              +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 AKHEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 333


>gi|49483589|ref|YP_040813.1| alanine racemase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257425463|ref|ZP_05601888.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428123|ref|ZP_05604521.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430754|ref|ZP_05607136.1| alanine racemase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433514|ref|ZP_05609872.1| alanine racemase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436355|ref|ZP_05612402.1| alanine racemase [Staphylococcus aureus subsp. aureus M876]
 gi|282903979|ref|ZP_06311867.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C160]
 gi|282905744|ref|ZP_06313599.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908715|ref|ZP_06316533.1| alanine racemase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282910979|ref|ZP_06318781.1| alanine racemase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914187|ref|ZP_06321974.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M899]
 gi|282919109|ref|ZP_06326844.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C427]
 gi|282924292|ref|ZP_06331966.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C101]
 gi|283958161|ref|ZP_06375612.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293501214|ref|ZP_06667065.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510175|ref|ZP_06668883.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M809]
 gi|293526767|ref|ZP_06671452.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M1015]
 gi|295427912|ref|ZP_06820544.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297591127|ref|ZP_06949765.1| alanine racemase [Staphylococcus aureus subsp. aureus MN8]
 gi|49241718|emb|CAG40408.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271920|gb|EEV04058.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274964|gb|EEV06451.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278882|gb|EEV09501.1| alanine racemase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281607|gb|EEV11744.1| alanine racemase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284637|gb|EEV14757.1| alanine racemase [Staphylococcus aureus subsp. aureus M876]
 gi|282313679|gb|EFB44072.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C101]
 gi|282316919|gb|EFB47293.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C427]
 gi|282322255|gb|EFB52579.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M899]
 gi|282324674|gb|EFB54984.1| alanine racemase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326979|gb|EFB57274.1| alanine racemase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331036|gb|EFB60550.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595597|gb|EFC00561.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus C160]
 gi|283790310|gb|EFC29127.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290920839|gb|EFD97902.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M1015]
 gi|291096219|gb|EFE26480.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467119|gb|EFF09637.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus M809]
 gi|295128270|gb|EFG57904.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297576013|gb|EFH94729.1| alanine racemase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438201|gb|ADQ77272.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus TCH60]
 gi|315195291|gb|EFU25678.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 361

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHEIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|21283016|ref|NP_646104.1| hypothetical protein MW1287 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486240|ref|YP_043461.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207946|ref|ZP_06924378.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300912030|ref|ZP_07129473.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH70]
 gi|21204455|dbj|BAB95152.1| MW1287 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244683|emb|CAG43116.1| putative alanine racemase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296887414|gb|EFH26315.1| alanine racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300886276|gb|EFK81478.1| alanine racemase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 361

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 70/348 (20%), Positives = 135/348 (38%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLVPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|283470613|emb|CAQ49824.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus ST398]
          Length = 361

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 71/348 (20%), Positives = 138/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLSGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 SLLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHAIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    ++T+++  +AV  IGY DG   T               
Sbjct: 239 KANVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|258423662|ref|ZP_05686550.1| alanine racemase 2 [Staphylococcus aureus A9635]
 gi|257846160|gb|EEV70186.1| alanine racemase 2 [Staphylococcus aureus A9635]
          Length = 361

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 73/348 (20%), Positives = 137/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAPDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFT--HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF----R 183
             +R G   L E  +    H+        +S + +H   AD+      +V+  ++     
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHHNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMDIVE 178

Query: 184 TLISHYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
            L+S     +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKK-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+  AG+   Y    +    ++ +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQAGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++ D++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDDNVHAQ--DDVILYNNDIRIDE 331


>gi|325846634|ref|ZP_08169549.1| alanine racemase, N-terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481392|gb|EGC84433.1| alanine racemase, N-terminal domain protein [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 141

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 6/145 (4%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M  N  L   +DL  + NN   +   S N++  AV+K + YGLG  +IA  + +  +   
Sbjct: 1   MQENYLL---VDLDKILNNIKLIKEKSINSKICAVLKADGYGLGALEIAKYINDQ-IDYI 56

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            V   +E   LR       I +L  +   + K     N+   I  +      ++ ++   
Sbjct: 57  AVAQFKEAKYLRDNGIDKPILILGYLPLDKYKECSSLNIDVGIYDLDYARKINESITG-- 114

Query: 121 SHPYALQVDTGFNRLGLSLQEALDF 145
           S    + +DTG  RLG    E    
Sbjct: 115 SINCHILLDTGHTRLGFRDFEIEKI 139


>gi|282916665|ref|ZP_06324423.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus D139]
 gi|282319152|gb|EFB49504.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus D139]
          Length = 361

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 67/348 (19%), Positives = 136/348 (39%), Gaps = 36/348 (10%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ++      N  ++     N    AVVK+NAY    E       +AG+  F  TS+ E ++
Sbjct: 7   VNKKIFLQNAITVKN---NQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQ 63

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R     A IF++  ++          ++     ++P LT+Y    +        L+ + 
Sbjct: 64  IRQLAQDATIFLMNAVYEFDLVREHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFEN 118

Query: 131 GFNRLGL-SLQEALDFTHNSFNKKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS 187
             +R G   L E  +   +    +  ++ +    +H   AD+      +V+  ++  ++ 
Sbjct: 119 LLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVE 178

Query: 188 ----HYKGIEASLASSSGILLGPN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTA 238
                    +   A +S            H    R GI+LYG     + + H +   +T 
Sbjct: 179 ALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTV 238

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           +A +I +R+   G+   Y    ++T+++  +AV  IGY DG   T               
Sbjct: 239 KAHVIQVREVQVGDYCGYSFAFEVTKNNTKLAVVDIGYGDGILRT------------RAK 286

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
            +  I G   PI   + M     ++  ++  +  D + ++  DI++D+
Sbjct: 287 HEALINGKRYPIR-ALMMSHMFVEVDGNVHAQ--DEVILYNNDIRIDE 331


>gi|213859640|ref|ZP_03385344.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. M223]
          Length = 125

 Score = 99.7 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
             ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3   RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           ++EE + LR    +  I +L G    Q+   +DT  +             +         
Sbjct: 60  NLEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLD 119

Query: 124 YALQVD 129
             ++V+
Sbjct: 120 IYVKVN 125


>gi|1373382|gb|AAB17466.1| alanine racemase [Treponema pallidum]
          Length = 178

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 7/166 (4%)

Query: 30  ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG 89
           AR    VK +AYG G   +A A  + GV  F V  V+E  +LR    +A I  L      
Sbjct: 6   ARVCLPVKADAYGHGACDVAQAALSCGVHSFAVACVQEASQLRAAGVRAPILCLSTPTAE 65

Query: 90  QEKIIFDTNLIPVISSVPQLTFYS----KLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
           +   + +  +  VIS    +   +    +    G +    +++DTG  R+G +  EA   
Sbjct: 66  EISSLIEHRVHTVISERAHIALIARALRQSADTGATCGVHVKIDTGMGRIGCAPDEACAL 125

Query: 146 THNSFNKKLGQLSLIISHLACADDPSSH---VNSVQLERFRTLISH 188
                      L  + +H + AD   +       +Q   F   + +
Sbjct: 126 VQMVCATPGLHLEGVCTHFSVADSVRAEDLQYTEMQRAHFMHCVQY 171


>gi|28493463|ref|NP_787624.1| alanine racemase [Tropheryma whipplei str. Twist]
 gi|28572425|ref|NP_789205.1| alanine racemase I [Tropheryma whipplei TW08/27]
 gi|28410556|emb|CAD66942.1| alanine racemase I [Tropheryma whipplei TW08/27]
 gi|28476504|gb|AAO44593.1| alanine racemase [Tropheryma whipplei str. Twist]
          Length = 386

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 73/397 (18%), Positives = 133/397 (33%), Gaps = 64/397 (16%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           SN   +  I L  LK N   +      A+   V+K NA G G  ++A     +G+++F V
Sbjct: 8   SNSHAQAFISLGTLKKNLLWLQNEVAPAKVFMVIKANANGHGTMRVAEVAKMSGIRNFAV 67

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHP--GQEKIIFDTNLIPVISSVPQLTFYSKLMSC-- 118
              +E + ++           + I P       + + N+   I +  QL + +  +    
Sbjct: 68  LLPKEALLIKRALSPGVRVFTWHITPDCEDLPSLIENNIEIGIGAEWQLRYIASCVKKTM 127

Query: 119 -------GVSHPYALQVDTGFNRLGLSLQEALDFTH-------NSFNKKLGQLSLIISHL 164
                         L++DTG +R G  +++  +              K  G  S + +  
Sbjct: 128 TCEVLSGYKPALIHLKLDTGLSRGGCGVKDWQNLVCLAQDFQEMGLIKITGFWSHLSNTS 187

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
              D  S  + +  +  +    S        +A+S   L  P       R G+S +G  +
Sbjct: 188 PEEDRRSLKIFTENVTPYLASYSRRARPIMHIAASVAALGLPESRLDYVRLGLSCFGYYE 247

Query: 225 KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLS 284
           K         V+T  A II                     +   A+ A G+ADG    L+
Sbjct: 248 KEELK----GVMTLVAPIIKFLP-----------------EQGRAIIACGFADGIS-PLA 285

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD-----ITDSLSIEVGDY------ 333
             ++          +    G    ++ +I  D    D     + +S      D       
Sbjct: 286 VRNNVPLTGRSNRARLIEVGPETSVI-EICQD---IDRRQDNLQNSYDHVPQDPFLNALR 341

Query: 334 -----IQIFG----PDIKLDDVALASGTTNYDLLVRI 361
                + +FG     ++     A + GTT  D+L R+
Sbjct: 342 VSQNHVILFGSGGLSELTARQWAESCGTTIDDVLSRV 378


>gi|329767985|ref|ZP_08259496.1| hypothetical protein HMPREF0428_01193 [Gemella haemolysans M341]
 gi|328838470|gb|EGF88078.1| hypothetical protein HMPREF0428_01193 [Gemella haemolysans M341]
          Length = 357

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 69/358 (19%), Positives = 119/358 (33%), Gaps = 33/358 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++++   ++ N  ++   S +    AVVK+NAY L   +        G+  F  T  
Sbjct: 1   MATIELNYNNIRQNAINLKERSQD--IIAVVKNNAYNLNLRECVKLYSEVGINYFATTKE 58

Query: 66  EEGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EE   +R      A IF+L   +       ++  +     ++  L +  + +        
Sbjct: 59  EECKVIRETLGEDANIFLLNPTYNFDLVREYNVEI-----NIASLEYLKENLENVRDLTL 113

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ---LER 181
            L+      R G    E +    N   +   +L    SH + AD+        +   L+ 
Sbjct: 114 QLEFAGSMRRAGARNLEEVLEIINFCKENTLKLKGFWSHFSFADEFDGFYEKEKELVLKV 173

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRP-GISLYGGTDKINKSHP-------MQ 233
                 H+      L +S+  L    +     +  GI LYG      K +P       ++
Sbjct: 174 LDEAQKHHDFEVIHLQNSASFLRDGVFEKTTHQRLGIILYGAMPYNVKENPVALKDLIIK 233

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T    II I     GE + Y           + V  IGY DG               
Sbjct: 234 NPITVYGEIINIVTLNKGECIGYSNSYIADAKKKVGVVNIGYGDGILR-----------D 282

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
              G    I G    I   + M   + +I +  S  +GD + I+    +L D     G
Sbjct: 283 RLKGQTCIINGKERNIYSTM-MSHLVVEIGEEES--IGDRVYIYDDKQQLHDYTKYFG 337


>gi|11991216|gb|AAG42250.1|AF306669_7 alanine racemase [Staphylococcus aureus]
          Length = 336

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 68/326 (20%), Positives = 129/326 (39%), Gaps = 33/326 (10%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            AVVK+NAY    E       +AG+  F  TS+ E +++R   P A IF++  ++     
Sbjct: 1   MAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYEFDLV 60

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL-SLQEALDFT--HNS 149
                ++     ++P LT+Y    +        L+ +   +R G   L E  +    H+ 
Sbjct: 61  REHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHH 115

Query: 150 FNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS----HYKGIEASLASSSGILLG 205
                  +S + +H   AD+      +V+  ++  ++          +   A +S     
Sbjct: 116 NQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYR 175

Query: 206 PN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGELVSYGGQK 260
                  H    R GI+LYG     + + H +   +T +A +I +R+  AG+   Y    
Sbjct: 176 EGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTLKAHVIQVREVQAGDYCGYSFAF 235

Query: 261 K-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
           +    ++ +AV  IGY DG   T                +  I G   PI   + M    
Sbjct: 236 EVTKNNTKLAVVDIGYGDGILRT------------RAKHEALINGKRYPIR-ALMMSHMF 282

Query: 320 FDITDSLSIEVGDYIQIFGPDIKLDD 345
            ++  ++  +  D + ++  DI++D+
Sbjct: 283 VEVDGNVHAQ--DEVILYNNDIRIDE 306


>gi|298694693|gb|ADI97915.1| probable alanine racemase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 336

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/326 (19%), Positives = 129/326 (39%), Gaps = 33/326 (10%)

Query: 33  AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEK 92
            AVVK+NAY    E       +AG+  F  TS+ E +++R   P A IF++  ++     
Sbjct: 1   MAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPNATIFLMNAVYEFDLV 60

Query: 93  IIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL-SLQEALDFTHNSFN 151
                ++     ++P LT+Y    +        L+ +   +R G   L E  +   +   
Sbjct: 61  REHQIHM-----TLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHQ 115

Query: 152 KKLGQLSLI--ISHLACADDPSSHVNSVQLERFRTLIS----HYKGIEASLASSSGILLG 205
            +  ++ +    +H   AD+      +++  ++  ++          +   A +S     
Sbjct: 116 NQNAKMIISGLWTHFGYADEFDVSDYNIERSQWMEIVEALLSEGYQFDLIHAQNSASFYR 175

Query: 206 PN----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGELVSYGGQK 260
                  H    R GI+LYG     + + H +   +T +A +I +R+  AG+   Y    
Sbjct: 176 EGQILLPHHTHARVGIALYGSRPYSSLNQHEIVQSLTVKAHVIQVREVQAGDYCGYSFAF 235

Query: 261 K-LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
           +    ++ +AV  IGY DG   T                +  I G   PI   + M    
Sbjct: 236 EVTKNNTKLAVVDIGYGDGILRT------------RAKHEALINGKRYPIR-ALMMSHMF 282

Query: 320 FDITDSLSIEVGDYIQIFGPDIKLDD 345
            ++  ++  +  D + ++  DI++D+
Sbjct: 283 VEVDGNVHAQ--DEVILYNNDIRIDE 306


>gi|241888732|ref|ZP_04776039.1| alanine racemase 2 [Gemella haemolysans ATCC 10379]
 gi|241864755|gb|EER69130.1| alanine racemase 2 [Gemella haemolysans ATCC 10379]
          Length = 357

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/358 (17%), Positives = 118/358 (32%), Gaps = 33/358 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
              ++++   ++ N  ++   + +    AVVK+NAY L   +        G+  F  T  
Sbjct: 1   MATIELNYNNIRQNAINLKEQAQD--IIAVVKNNAYNLDLRECVKLYSEVGINYFATTKE 58

Query: 66  EEGVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           EE   +R     +A IF+L   +              +  ++  L +  + +        
Sbjct: 59  EECKVIRETLGKEANIFLLNPTYD-----FALAREYNIEINIASLEYLKENIEKLKDLTL 113

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ---LER 181
            L+      R G    E +        +   +L    SH + AD+        +   L  
Sbjct: 114 QLEFAGSMRRAGAKNLEEVLEIIAFCKENDLKLKGFWSHFSFADEFDGFYEKEKELVLNV 173

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRP-GISLYGGTDKIN-------KSHPMQ 233
               + +Y      L +S+  L    +     +  GI LYG             ++  ++
Sbjct: 174 LDEALKNYDFEVVHLQNSASFLRDGVFEKTTHQRLGIILYGAMPYDVNVNLVALENLVIK 233

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +T    II I K   GE + Y        D  + +  IGY DG               
Sbjct: 234 NPITVYGEIINIVKLNKGECIGYSNSYIADVDKKVGIVNIGYGDGILR-----------D 282

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASG 351
              G    I G    I   + M   + +I +    ++GD + ++    +L D     G
Sbjct: 283 RLKGKTCIINGKNRNIYSTM-MSHLVVEIGEEE--QIGDRVYVYDDKQQLHDYTKYFG 337


>gi|325128702|gb|EGC51567.1| alanine racemase, catabolic [Neisseria meningitidis N1568]
          Length = 89

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 271 AAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEV 330
            A GYADGYP                     + G +  ++G+++MDM   ++ D+    +
Sbjct: 2   IACGYADGYPRRA-----------PSNSPVAVDGKLTRVIGRVSMDMMTIEL-DASQEGL 49

Query: 331 GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGT 363
           G  ++++G  + ++ VA A+GT  Y+L+  I  
Sbjct: 50  GHEVELWGDTVNINTVAEAAGTIPYELMCNIKR 82


>gi|148999066|ref|ZP_01826497.1| alanine racemase [Streptococcus pneumoniae SP11-BS70]
 gi|147755105|gb|EDK62161.1| alanine racemase [Streptococcus pneumoniae SP11-BS70]
          Length = 70

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 303 KGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLL 358
            G   PI+G+++MD     +     +  G  + + G     +I    VA    T NY+++
Sbjct: 1   DGQACPIVGRVSMDQITIRLPKLYPL--GTKVTLIGSNGDKEITATQVATYRVTINYEVV 58

Query: 359 VRIGTRYAKFY 369
             +  R  + Y
Sbjct: 59  CLLSDRIPREY 69


>gi|309802733|ref|ZP_07696837.1| conserved domain protein [Bifidobacterium dentium JCVIHMP022]
 gi|308220797|gb|EFO77105.1| conserved domain protein [Bifidobacterium dentium JCVIHMP022]
          Length = 105

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 305 YMVPILGKITMDMTMFDIT---DSLSIEVGDYIQIFGP-------DIKLDDVALASGTTN 354
            +  + G++ MD  + D+    D+L I  GD +++FGP       +   DD   A+ T +
Sbjct: 10  RLYRVSGRVCMDQFILDLHGSADALGIHEGDTVELFGPGRGEDYAEPTADDWGRAADTIS 69

Query: 355 YDLLVRIGTRYAKFY 369
           Y++   +  R  + Y
Sbjct: 70  YEIFTCLRNRIPRLY 84


>gi|293395856|ref|ZP_06640138.1| alanine racemase [Serratia odorifera DSM 4582]
 gi|291421793|gb|EFE95040.1| alanine racemase [Serratia odorifera DSM 4582]
          Length = 89

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 5  EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            +   + L A  NN   +   +  A+  +VVK NAYG G +++  +L  A    F +  
Sbjct: 3  RPISATLHLAAFDNNLQVIRRFAPTAKIWSVVKANAYGHGIDRVWQSL--ANTDGFALLD 60

Query: 65 VEEGVKLRLYTPQARIFVLYGI 86
          + E V LR    Q  I +L G 
Sbjct: 61 LAEAVMLRDAGWQGPILLLEGF 82


>gi|226320650|ref|ZP_03796208.1| alanine racemase [Borrelia burgdorferi 29805]
 gi|226233866|gb|EEH32589.1| alanine racemase [Borrelia burgdorferi 29805]
          Length = 287

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 9/216 (4%)

Query: 23  MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFV 82
           +    G     A +K +AYG G   I   L +  +  F ++++E+   L+      +I +
Sbjct: 27  IKNKIGEKEIVATLKGDAYGHGLINIFKFLKSKNINYFGLSNIEDAKTLKKIDKNIKILM 86

Query: 83  LYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSHPYALQVDTGFNRLGLSLQE 141
              +   + K +    L+P +S    L    K            L++D G NR G+ + +
Sbjct: 87  YIKVDKKEIKNLIKFELVPFVSDFEYLFLIEKECALQKNKIKVHLKIDIGMNRYGIKIDD 146

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI-----SHYKGIEASL 196
           AL+      N K  +L  I SHL   ++        Q+E+F   +      +       +
Sbjct: 147 ALEIATYIQNSKFLELEGICSHLPSIENF--KTTQKQIEQFLFFLETLKQKNIHPKFVHI 204

Query: 197 ASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHP 231
           ++S  I+    N  F + RPG+ LYG    +    P
Sbjct: 205 SNSGHIINYKLNPQFNMVRPGLILYGYCQSLKNKKP 240


>gi|325526100|gb|EGD03760.1| alanine racemase [Burkholderia sp. TJI49]
          Length = 115

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 3/109 (2%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             +   I   A+++N   +   +  +R  AV+K +AYG G E+I   L         +  
Sbjct: 3   RPIVAHIRPDAIRHNLDFIRRTAAQSRVWAVIKADAYGHGIERIYSGLAA--ADGIALLD 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIH-PGQEKIIFDTNLIPVISSVPQLTFY 112
           + E V++R       + +L GI  P   +++    L   +    QL   
Sbjct: 61  LAEAVRVRELGWDKPVLLLEGIFEPTDVELVERHRLTVSVHCDEQLDML 109


>gi|317471393|ref|ZP_07930747.1| serine/alanine racemase [Anaerostipes sp. 3_2_56FAA]
 gi|316901144|gb|EFV23104.1| serine/alanine racemase [Anaerostipes sp. 3_2_56FAA]
          Length = 72

 Score = 92.4 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 24/60 (40%)

Query: 28 GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIH 87
           + +   V+K + YG G   +A AL   GV  F V  +EEG+ LR               
Sbjct: 3  PDTKIMPVIKADGYGHGAVPVAKALNKIGVDGFAVAIIEEGIALRKQGITKTDPNSRIYF 62


>gi|219121969|ref|XP_002181328.1| alanine racemase [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407314|gb|EEC47251.1| alanine racemase [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 710

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/302 (19%), Positives = 100/302 (33%), Gaps = 63/302 (20%)

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ---------------EALDFTHNSFNKKLGQLSLIIS 162
                 +   VD+G  RLG   +               E L    ++       +     
Sbjct: 421 TRKRLRWHALVDSGMGRLGFKTEPVKKEDALAGRRDTVEILQDMLDAEINGNAPIEFYGM 480

Query: 163 HLACADDP-SSHVNSVQLERFRTLISHYKGIEAS------------------LASSSGIL 203
               A+   +S     Q+ +F  L+   +                         + S IL
Sbjct: 481 CTHMAEATATSDFTKSQIAKFINLLKRVRSAGIYIPTVSTDNSAALLTTNLTHFNPSEIL 540

Query: 204 LGPNYHFQ-LTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKL 262
              +   +   R G ++YG     ++   +Q V T  A +  +     GE V Y      
Sbjct: 541 SQKDSDTRGFVRTGGAIYGQRPAFDE---LQAVSTLLASVRHVAILKQGESVGYDRAYIA 597

Query: 263 TRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDI 322
             +  IA   IG+ADGYP  L              GK  I+G + P+ G + MDM M ++
Sbjct: 598 PYNVRIATLTIGFADGYPRELGNGV----------GKVQIRGSVFPVAGNVCMDMLMIEL 647

Query: 323 TDSLS------IEVGDYIQIFGPD--------IKLDDVALASGTTNYDLLVRIGT-RYAK 367
             +        + VGD   ++GP         ++L D+A    TT   L   +   R  +
Sbjct: 648 GPAEDTDIGSTVAVGDTAVLWGPLDENDDYGMVRLQDLATTLKTTQSALTCGLDKIRVLR 707

Query: 368 FY 369
            +
Sbjct: 708 QF 709



 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 10  KIDLTALKNNWHSMNALSGNAR--TAAVVKDNAYGLGCEKIAPALYN-AGVQDFFVTSVE 66
           +I L+AL++N+  + + +   R    AVVK + YG G    A  L +  G   F V ++E
Sbjct: 39  RIRLSALQHNFAFVESTAARQRCSVIAVVKADGYGHGAIATALHLADRCGADAFAVATLE 98

Query: 67  EGVKLRLYT 75
           E + LR   
Sbjct: 99  EAISLRRAF 107


>gi|256027409|ref|ZP_05441243.1| alanine racemase, biosynthetic [Fusobacterium sp. D11]
          Length = 98

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 23/113 (20%)

Query: 262 LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
           +  DS  AV  IGYADG    LS            GG   I  +   I+G I MDMTM  
Sbjct: 1   MPADSTYAVLPIGYADGLKKYLS-----------KGGYVLINNHRCEIIGNICMDMTMIR 49

Query: 322 ITDSLS--IEVGDYIQIFGPDIKLDDVALASGTTN----YDLLVRIGTRYAKF 368
           I   +   +++GD + +   DI LD++            ++ +  IG R  + 
Sbjct: 50  IPKEIENSVKIGDEVTVINADI-LDNLN-----IPELCVWEFMTGIGKRVKRI 96


>gi|330813902|ref|YP_004358141.1| alanine racemase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486997|gb|AEA81402.1| alanine racemase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 154

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 1/138 (0%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLG-CEKIAPALYNAGVQDFF 61
            +   ++ I+LT++KNN+  +      +  +A VK ++YGLG   KI  +L     ++FF
Sbjct: 2   KHSSGQVSINLTSIKNNYLFLKRFCKPSVVSATVKASSYGLGEANKIVASLVKLKCKNFF 61

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           V +V+E +K+R       IFVL G+   +E + F   L PV+++  Q   +++ +     
Sbjct: 62  VANVKEALKIRKKFKSINIFVLNGLGIKEESVFFKNKLTPVLNTYSQFEKWTRYLKKNYQ 121

Query: 122 HPYALQVDTGFNRLGLSL 139
               + VDTG NRLG   
Sbjct: 122 RNIMIHVDTGMNRLGFQE 139


>gi|227432609|ref|ZP_03914587.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227351645|gb|EEJ41893.1| alanine racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 226

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 90/233 (38%), Gaps = 23/233 (9%)

Query: 146 THNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH--YKGIEASLASSSGIL 203
                 +       + +H A AD P+      Q+  ++ L      +  E   A++    
Sbjct: 4   IQEVSAQDTLIFQSMWTHFATADTPNVDYVDFQISEWQRLTHDLPVEPNENHFANTGIAT 63

Query: 204 LGPN-YHFQLTRPGISLYGGT---DKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQ 259
             P   +  + R GI L+G       ++    +   ++ +A+++  +    G  V YG +
Sbjct: 64  WYPEKINTDIVRLGIGLFGINGSVPIMSMPFELIPALSLKAKVVNSKPLKKGNAVGYGAE 123

Query: 260 KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTM 319
                D  +    IG++DGYP   SG+ +  +            G +  I+G + MD +M
Sbjct: 124 YHAPNDGYLITIPIGHSDGYPFNGSGMRALVA-----------DGQIGHIVGGVAMDQSM 172

Query: 320 FDITDSLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
             +T+   + VG  + + G      I + D+A  + ++   L+     R  + 
Sbjct: 173 IFVTN--PVAVGTTVTLIGRVGDQSITMQDLAEHTQSSIVALMNDFAPRLQRI 223


>gi|323359912|ref|YP_004226308.1| alanine racemase [Microbacterium testaceum StLB037]
 gi|323276283|dbj|BAJ76428.1| alanine racemase [Microbacterium testaceum StLB037]
          Length = 211

 Score = 89.3 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 16/137 (11%)

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
           ++   R +  +  L GE VSYG   +   D+ +A+   GYA G   +L    +       
Sbjct: 84  LSLRGRALGTKALLRGEGVSYGYTHRAPHDTRVALVTGGYAQGVVRSLGNAVT------- 136

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP----DIKLDDVALASG 351
                 I G    I+G++ MD+ + D+ D+  I  G  +  FG        L++   A+G
Sbjct: 137 ----VAIDGRRHRIVGRVAMDVCVVDVGDA-DIARGAEVVFFGDPAEGHPSLEEWTDATG 191

Query: 352 TTNYDLLVRIGTRYAKF 368
            +  +++  +G R  + 
Sbjct: 192 WSAAEIVAAVGVRAERR 208


>gi|260890258|ref|ZP_05901521.1| alanine racemase [Leptotrichia hofstadii F0254]
 gi|260859878|gb|EEX74378.1| alanine racemase [Leptotrichia hofstadii F0254]
          Length = 77

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          L+I+   LK N   + +++ N     V+KDNAYGLG E + P L       F V  +EE 
Sbjct: 5  LEINRENLKRNLEKIRSINKN--IVCVIKDNAYGLGIENVFPILLENNCNYFAVAYIEEA 62

Query: 69 VKLRLYTPQ 77
          +K+R    +
Sbjct: 63 IKIRKILKK 71


>gi|330952100|gb|EGH52360.1| alanine racemase [Pseudomonas syringae Cit 7]
          Length = 58

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 5  EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R  IDL AL++N+      SG  +  AVVK +AYG G  ++A AL  +    F V 
Sbjct: 2  RPARAFIDLQALRHNYQLARENSGG-KALAVVKADAYGHGAVRVAQAL-ESQADGFAVA 58


>gi|289828986|ref|ZP_06546686.1| D-amino acid dehydrogenase-Alanine racemase fusion protein
          [Salmonella enterica subsp. enterica serovar Typhi str.
          E98-3139]
          Length = 71

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 5  EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVT 63
            ++  +DL  +K N   +   +  AR  +VVK NAYG G E++  AL   G    F + 
Sbjct: 3  RPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAML 59

Query: 64 SVEEGVKLRLYT 75
          ++EE + LR   
Sbjct: 60 NLEEAITLRERG 71


>gi|169836938|ref|ZP_02870126.1| alanine racemase [candidate division TM7 single-cell isolate TM7a]
          Length = 56

 Score = 86.3 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 319 MFDITDS--LSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           M  + D      + GD ++ FG +I + +VA   GT +Y++L  I  R  + Y
Sbjct: 1   MILLPDELKDEAKKGDVVEFFGENISVVEVAELCGTISYEILCGISQRVPRIY 53


>gi|213023501|ref|ZP_03337948.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
          Length = 110

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 214 RPGISLYGGTD----KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIA 269
           RPGI LYG +             Q V++  + +I +R   AGE V YGG     RD+ + 
Sbjct: 2   RPGIILYGVSPLEHKPWGPDFGFQPVMSLTSSLIAVRDHKAGEPVGYGGTWVSERDTRLG 61

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD 324
           V A+GY DGYP                G    + G  VPI+G++ MDM   D+  
Sbjct: 62  VVAMGYGDGYPRAA-----------PSGTPVLVNGREVPIVGRVAMDMICVDLGP 105


>gi|213416540|ref|ZP_03349684.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 68

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
              LG++ MD  M D +  +    GD ++  G    L++VA A  T  Y+++ R+G R+ 
Sbjct: 2   CRSLGRVCMDSFMVDASAIMPTS-GDVVEFIGVSQTLEEVAAACDTIPYEIMARLGARFR 60

Query: 367 KF 368
           + 
Sbjct: 61  RI 62


>gi|212639867|ref|YP_002316387.1| putative amino acid racemase [Anoxybacillus flavithermus WK1]
 gi|212561347|gb|ACJ34402.1| Predicted amino acid racemase [Anoxybacillus flavithermus WK1]
          Length = 366

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 119/347 (34%), Gaps = 40/347 (11%)

Query: 7   LRLKIDLTALKNNWHSMNALS--GNARTAAVVKD-NAYGLGCEKIAPALYNAGVQDFFVT 63
            R++IDL  +++N  ++         +  AVVK  N    G  +IA  L ++GV     T
Sbjct: 3   PRVEIDLRKIRHNAKTLKKWCEEKGIQMTAVVKGVN----GDVEIARTLVDSGVTSLADT 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            +E   KL+     A   ++      +   +     +   S +  +   S        +H
Sbjct: 59  KIERIAKLKSTHIPATYMLIRTPALSEVSEVVRHVDVSAQSEIDVVRAISAEAVKQNKTH 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              + V+ G  R G+  ++   F          QL+ I ++ AC           Q  R 
Sbjct: 119 AIIVMVEMGDLREGVMPEDVPAFIEQVRQLPNIQLAGIGANFACFGGIIPT---EQKMRE 175

Query: 183 RTLISHYKGIEASLA-------SSSGILLGPNY----HFQLTRPGISLYGGTDKINKSHP 231
            + ++ +   E +L        +S+                 R G +++ G + I  +  
Sbjct: 176 LSSLAKHIQKEYTLFLPYVSGGNSANYYWLKQTADVGCINHLRLGEAIFLGRETIRGAAI 235

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
                 A   +  + +      V YG Q   +R++                + G+  +  
Sbjct: 236 PGLYQDAFCLVAEVIEVKTKPSVPYGVQ---SRNAFGEAPTFPERGMMKRAIVGIGRQD- 291

Query: 292 PSVFLGGKGFIKG----YMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                     + G      V I+G  + D  + D T +  I+VGDYI
Sbjct: 292 --------VNVNGLTPLAPVDIIGSSS-DHMIIDATRT-DIQVGDYI 328


>gi|320546814|ref|ZP_08041121.1| alanine racemase [Streptococcus equinus ATCC 9812]
 gi|320448531|gb|EFW89267.1| alanine racemase [Streptococcus equinus ATCC 9812]
          Length = 192

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 76/229 (33%), Gaps = 50/229 (21%)

Query: 150 FNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIE--ASLASSSGILLGPN 207
            N++   +  I +H A AD+        Q   F  L+ +          ++S+  +    
Sbjct: 5   LNEQGCHVEGIFTHFATADEADLDKFEQQFSFFSELVDNLAYKPDLVHASNSATSIWHSE 64

Query: 208 YHFQLTRPGISLYGGTDK---INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
             F   R GI +YG       +    P++  ++ E+ ++ ++K  AG  + Y      + 
Sbjct: 65  TIFNAVRLGIVIYGLNSSGRELELPFPLKPALSLESSLVHVKKLEAGADIGYRATYTTSG 124

Query: 265 DSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD 324
           +  I    I YADG+ L L    +                                    
Sbjct: 125 EEYIGTVPIIYADGWTLHLPKKYT------------------------------------ 148

Query: 325 SLSIEVGDYIQIFG----PDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
                +G  + + G      +   ++A    T NY++L  +  R  + Y
Sbjct: 149 -----LGIKVTLIGGSGDNSVSATNLAQYKQTINYEVLCLLSDRIPRIY 192


>gi|315079986|gb|EFT51962.1| hypothetical protein HMPREF9569_02523 [Propionibacterium acnes
           HL078PA1]
          Length = 60

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 317 MTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTTNYDLLVRIGTRYAK 367
             M D+    ++ VGD + + G      +  DD+A   GT +Y++   I  R  +
Sbjct: 1   QFMVDLGPDSNVTVGDEVVLIGTQEDETLTADDMAELLGTISYEITCAISKRVDR 55


>gi|50059382|gb|AAT69419.1| alanine racemase [Borrelia turicatae]
          Length = 95

 Score = 83.9 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 39/96 (40%), Gaps = 2/96 (2%)

Query: 1  MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          M  N+   + I+L  L+ N  ++          A +K +AYG G  +    L   G+  F
Sbjct: 1  MIKNK--EIIINLKNLEYNLTAIKNHIQKRELVATLKADAYGHGLIQTFKFLKEKGINYF 58

Query: 61 FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
           +  ++E +K++    +A + +         K +  
Sbjct: 59 GIFWIDEALKIKKIDKRANVLLYINTDKSAIKNLVK 94


>gi|229542368|ref|ZP_04431428.1| alanine racemase domain protein [Bacillus coagulans 36D1]
 gi|229326788|gb|EEN92463.1| alanine racemase domain protein [Bacillus coagulans 36D1]
          Length = 386

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/343 (16%), Positives = 103/343 (30%), Gaps = 30/343 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
             R++I+L  +++N  ++  L G        VVK    +        IA AL  AG+   
Sbjct: 4   LPRVEINLEKIRHNAKTLKQLFGRKGISITGVVKGVTAD------LNIAGALVEAGITSL 57

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
             + +    K+R    +A + +L      + +       I + + +  +   S       
Sbjct: 58  ADSKIANIEKMRKAGIKADLILLRSPGISEVEKTVRYADISMNTELDTIRALSAEAVRQQ 117

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ- 178
            +H   L V+ G  R G+ L++A       F     +L+ I ++ AC          +Q 
Sbjct: 118 KTHKIILMVEMGDLREGILLKDAPAMIREIFTCPGIELAGIGTNFACFGGVLPTEQKMQT 177

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHF-------QLTRPGISLYGGTDKINKSHP 231
             RF   +     ++    S                      R G S+  G +       
Sbjct: 178 FSRFVQAMQELFSLKLPYVSGGNSANYNWAVKTKDAEAVNNVRLGESILLGRETSGGHII 237

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
                 A   +  + ++     V YG        +           G           H 
Sbjct: 238 PSLYQDAFCFVAEVIESKIKPSVPYG----TIGKNAFGEQVTFIDRGNRRRTIISAGRHD 293

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
             V              I+G  + D  + D T    +  GD +
Sbjct: 294 VLVSGLTPV----RPFHIIGSSS-DHIILD-TKDAVLVPGDEV 330


>gi|238927301|ref|ZP_04659061.1| possible alanine racemase [Selenomonas flueggei ATCC 43531]
 gi|238884888|gb|EEQ48526.1| possible alanine racemase [Selenomonas flueggei ATCC 43531]
          Length = 61

 Score = 81.2 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 4  NEFLRLKIDLTALKNNWHSMNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAG 56
          N     +IDL AL +N+  + +     A+  AVVK +AYG G    A    + G
Sbjct: 3  NRAAWAEIDLGALAHNYREIRSRIQKRAKLCAVVKADAYGHGAIAAARVALDEG 56


>gi|213581123|ref|ZP_03362949.1| alanine racemase [Salmonella enterica subsp. enterica serovar
          Typhi str. E98-0664]
          Length = 53

 Score = 80.9 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNA 55
            + I+  AL++N   +  L+  ++  AVVK NAYG G  + A  L +A
Sbjct: 4  ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPDA 52


>gi|224824431|ref|ZP_03697538.1| alanine racemase domain protein [Lutiella nitroferrum 2002]
 gi|224602924|gb|EEG09100.1| alanine racemase domain protein [Lutiella nitroferrum 2002]
          Length = 628

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 110/342 (32%), Gaps = 26/342 (7%)

Query: 7   LRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R+ IDL  ++ N   +     +   + A V K  A   G  ++A A+   GV     + 
Sbjct: 4   PRIIIDLDRIEENTRVLVEACRTQGIQVAGVTKS-A--CGSPRVARAMVRGGVAQIADSR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           ++  V+LR       + ++    P + + +     I + S +  L   S+     GV H 
Sbjct: 61  LDNIVRLRRDGISVPLMLIRAPAPAEAEQVVRHADISLNSELQTLQALSRAAVQLGVVHD 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERF 182
             L +D G  R G+   E +D+          +L  + ++LAC       V N   L   
Sbjct: 121 VVLMIDLGDLREGILPHETMDYVEQILALAGVRLIGVGTNLACVGGIQPTVDNLSNLAYL 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
              I     IE  + S       P     L   G    G     +       ++      
Sbjct: 181 ADEIRRRHAIELPIVSGGNTFSLP-----LLEQGQLPAGIN---HLRLGASIMLAESPTP 232

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT--LSGLDSEHSPSVFLGGKG 300
             +   L  +  +        +        +   D +       G D      +   G+ 
Sbjct: 233 PGLYGKLHKDAYTLTADVIEAKTKPSRPYGLSGEDAFGRRPVFDGEDRPARRLILAMGRE 292

Query: 301 FIK-------GYMVPILGKITMDMTMFDITDSLSI-EVGDYI 334
            I           + +LG  + D  + D + + +   +GD +
Sbjct: 293 DIAPEGLRPTDERLQVLGASS-DHLIVDASAAEAAYRLGDSV 333


>gi|54303507|ref|YP_133500.1| amino acid racemase [Photobacterium profundum SS9]
 gi|46916937|emb|CAG23700.1| hypothetical amino acid racemase [Photobacterium profundum SS9]
          Length = 361

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 6/169 (3%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M +    RL+IDL  + +N H++             V+K +   LG  +IA  L +AGV 
Sbjct: 1   MRTISMPRLEIDLDKIYHNAHTLVDRLACRGISVTGVMKAS---LGSPEIARVLLSAGVN 57

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS- 117
               + +E    +R     A + ++      Q   I     + + + +  ++  S     
Sbjct: 58  MIGDSRIENIETMRRAGVAAPMILIRSPMLSQVDRIVTHADLSLNTELDVISKLSSAAKA 117

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
            G  H   L V+ G  R G+   +  D            L  I ++LAC
Sbjct: 118 AGRKHGVVLMVELGDLREGIMPADLEDTVRQVLRLPNIALRGIGANLAC 166


>gi|328676397|gb|AEB27267.1| alanine racemase [Francisella cf. novicida Fx1]
          Length = 231

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 21/246 (8%)

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L  D G  R G    + +   +   N     ++L        +        +       
Sbjct: 1   MLDFDCGMGRFGFYKDDFIKHLYKLKNAGFSNITLFSHIPTGYNGFDKSKKYIDKIL--- 57

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            ++    ++ + ++S   L   ++  +  RP  ++ G   +  +   ++  +  +A II 
Sbjct: 58  SLATQTKLKYTFSNSPVSLFSYDFQQEYIRPCSAILGYDQEPQE---IKFSLALKACIIS 114

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKG 304
           IR    G+ +SY  +    RD+ +A+  IGYADG               +       IK 
Sbjct: 115 IRDIPKGQYISYANEYFCDRDTTVAILNIGYADGL-----------GCKIHKDSYLIIKD 163

Query: 305 YMVPILGKITMDMTMFDITDS-LSIEVGDYIQIFGPD-IKLDDVALASGTTNYDLLVRIG 362
              PIL  I MD    DI+     +++ D I++FGP+ + L+  A     T  + L ++ 
Sbjct: 164 TKCPIL-AINMDYLYIDISAIKHQLKILDMIELFGPNSLSLEQHASMYNITKDEALTKLN 222

Query: 363 T-RYAK 367
             R  K
Sbjct: 223 ALRVKK 228


>gi|218673972|ref|ZP_03523641.1| putative alanine racemase [Rhizobium etli GR56]
          Length = 174

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 75/131 (57%), Positives = 88/131 (67%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           LRL +DLTAL  NW  M   SG AR AAVVK +AYGLG E    ALY AG +DFFV +V+
Sbjct: 21  LRLTVDLTALTENWRDMARRSGAARAAAVVKADAYGLGIEDAGEALYLAGARDFFVATVD 80

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           EGV LRLY P ARIFVL GI PG E+  FD +L+PVISS  QL F+  +++    +P AL
Sbjct: 81  EGVTLRLYAPDARIFVLSGIWPGTERRFFDNDLVPVISSDEQLAFWMAVLADYGDYPCAL 140

Query: 127 QVDTGFNRLGL 137
            VDTGF   G 
Sbjct: 141 HVDTGFTGWGC 151


>gi|242241683|ref|ZP_04796128.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
 gi|242234865|gb|EES37176.1| conserved hypothetical protein [Staphylococcus epidermidis W23144]
          Length = 80

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 24  NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVTSVEEGVKLRLYTPQARIFV 82
              + +AR  +VVK NAYG G E+I  A+   G    F + ++EE + LR    +  I +
Sbjct: 1   RQAATHARVWSVVKANAYGHGIERIWSAI---GATDGFALLNLEEAITLRERGWKGPILM 57

Query: 83  LYGIHPGQEKIIFDTNLIPVISS 105
           L G    Q+  I+D + +     
Sbjct: 58  LEGFFHAQDLEIYDQHRLTTCVH 80


>gi|315079988|gb|EFT51964.1| conserved domain protein [Propionibacterium acnes HL078PA1]
          Length = 65

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQDFFVT 63
            IDL+A+  N   +   +G+ +    VK +AYG G  +++  +          V 
Sbjct: 10 AIIDLSAIAANLAVVRKRAGDRKVLFAVKADAYGHGAVEVSRYVEKHRYADWLAVA 65


>gi|282853032|ref|ZP_06262369.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J139]
 gi|282582485|gb|EFB87865.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J139]
 gi|314922669|gb|EFS86500.1| alanine racemase protein [Propionibacterium acnes HL001PA1]
 gi|314965753|gb|EFT09852.1| alanine racemase protein [Propionibacterium acnes HL082PA2]
 gi|314982895|gb|EFT26987.1| alanine racemase protein [Propionibacterium acnes HL110PA3]
 gi|315091202|gb|EFT63178.1| alanine racemase protein [Propionibacterium acnes HL110PA4]
 gi|315094435|gb|EFT66411.1| alanine racemase protein [Propionibacterium acnes HL060PA1]
 gi|315105155|gb|EFT77131.1| alanine racemase protein [Propionibacterium acnes HL050PA2]
 gi|327328930|gb|EGE70690.1| putative alanine racemase [Propionibacterium acnes HL103PA1]
          Length = 342

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTTFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + +     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVATGLLNDPKVITTISRREDVAAVRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKELDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHTDGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|50059385|gb|AAT69421.1| alanine racemase [Borrelia miyamotoi]
          Length = 72

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 1  MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          M  N+   + I+   L++N  S+          A +K +AYG G  +    L   G+  F
Sbjct: 1  MIKNK--EIIINFKNLEHNVISIKNHVQKRELVATLKADAYGHGLIQTFKFLKKRGINYF 58

Query: 61 FVTSVEEGVKLRL 73
           +  +++ +KL+ 
Sbjct: 59 GLFWIDDALKLKK 71


>gi|327334549|gb|EGE76260.1| putative alanine racemase [Propionibacterium acnes HL097PA1]
          Length = 342

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + +     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAAVRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKELDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|50843786|ref|YP_057013.1| putative alanine racemase [Propionibacterium acnes KPA171202]
 gi|50841388|gb|AAT84055.1| putative alanine racemase [Propionibacterium acnes KPA171202]
          Length = 342

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKELDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|289424666|ref|ZP_06426449.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK187]
 gi|295131874|ref|YP_003582537.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK137]
 gi|289155363|gb|EFD04045.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK187]
 gi|291377092|gb|ADE00947.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK137]
 gi|313765034|gb|EFS36398.1| alanine racemase protein [Propionibacterium acnes HL013PA1]
 gi|313771074|gb|EFS37040.1| alanine racemase protein [Propionibacterium acnes HL074PA1]
 gi|313792575|gb|EFS40661.1| alanine racemase protein [Propionibacterium acnes HL110PA1]
 gi|313803576|gb|EFS44758.1| alanine racemase protein [Propionibacterium acnes HL110PA2]
 gi|313811761|gb|EFS49475.1| alanine racemase protein [Propionibacterium acnes HL083PA1]
 gi|313815716|gb|EFS53430.1| alanine racemase protein [Propionibacterium acnes HL059PA1]
 gi|313829181|gb|EFS66895.1| alanine racemase protein [Propionibacterium acnes HL063PA2]
 gi|313832295|gb|EFS70009.1| alanine racemase protein [Propionibacterium acnes HL007PA1]
 gi|313832755|gb|EFS70469.1| alanine racemase protein [Propionibacterium acnes HL056PA1]
 gi|313839614|gb|EFS77328.1| alanine racemase protein [Propionibacterium acnes HL086PA1]
 gi|314916206|gb|EFS80037.1| alanine racemase protein [Propionibacterium acnes HL005PA4]
 gi|314917473|gb|EFS81304.1| alanine racemase protein [Propionibacterium acnes HL050PA1]
 gi|314921808|gb|EFS85639.1| alanine racemase protein [Propionibacterium acnes HL050PA3]
 gi|314930926|gb|EFS94757.1| alanine racemase protein [Propionibacterium acnes HL067PA1]
 gi|314955405|gb|EFS99810.1| alanine racemase protein [Propionibacterium acnes HL027PA1]
 gi|314959150|gb|EFT03252.1| alanine racemase protein [Propionibacterium acnes HL002PA1]
 gi|314963881|gb|EFT07981.1| alanine racemase protein [Propionibacterium acnes HL082PA1]
 gi|314969091|gb|EFT13189.1| alanine racemase protein [Propionibacterium acnes HL037PA1]
 gi|314975191|gb|EFT19286.1| alanine racemase protein [Propionibacterium acnes HL053PA1]
 gi|314977603|gb|EFT21698.1| alanine racemase protein [Propionibacterium acnes HL045PA1]
 gi|314985051|gb|EFT29143.1| alanine racemase protein [Propionibacterium acnes HL005PA1]
 gi|315078985|gb|EFT50997.1| alanine racemase protein [Propionibacterium acnes HL053PA2]
 gi|315081505|gb|EFT53481.1| alanine racemase protein [Propionibacterium acnes HL078PA1]
 gi|315097170|gb|EFT69146.1| alanine racemase protein [Propionibacterium acnes HL038PA1]
 gi|315099350|gb|EFT71326.1| alanine racemase protein [Propionibacterium acnes HL059PA2]
 gi|315102309|gb|EFT74285.1| alanine racemase protein [Propionibacterium acnes HL046PA1]
 gi|315109690|gb|EFT81666.1| alanine racemase protein [Propionibacterium acnes HL030PA2]
 gi|327332492|gb|EGE74227.1| putative alanine racemase [Propionibacterium acnes HL096PA2]
 gi|327446730|gb|EGE93384.1| alanine racemase protein [Propionibacterium acnes HL043PA2]
 gi|327448828|gb|EGE95482.1| alanine racemase protein [Propionibacterium acnes HL043PA1]
 gi|327454245|gb|EGF00900.1| alanine racemase protein [Propionibacterium acnes HL087PA3]
 gi|327456305|gb|EGF02960.1| alanine racemase protein [Propionibacterium acnes HL083PA2]
 gi|327457422|gb|EGF04077.1| alanine racemase protein [Propionibacterium acnes HL092PA1]
 gi|328756003|gb|EGF69619.1| alanine racemase protein [Propionibacterium acnes HL087PA1]
 gi|328759890|gb|EGF73480.1| putative alanine racemase [Propionibacterium acnes HL099PA1]
          Length = 342

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|313814229|gb|EFS51943.1| alanine racemase protein [Propionibacterium acnes HL025PA1]
          Length = 342

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|291084576|ref|ZP_06539348.2| D-amino acid dehydrogenase-Alanine racemase fusion protein
          [Salmonella enterica subsp. enterica serovar Typhi str.
          AG3]
          Length = 61

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 20 WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGV-QDFFVTSVEEGVKLRLYTPQA 78
             +   +  AR  +VVK NAYG G E++  AL   G    F + ++EE + LR    + 
Sbjct: 1  MAIVRRAAPEARVWSVVKANAYGHGIERVWSAL---GATDGFAMLNLEEAITLRERGWKG 57

Query: 79 RIFV 82
           I +
Sbjct: 58 PILM 61


>gi|315107396|gb|EFT79372.1| alanine racemase protein [Propionibacterium acnes HL030PA1]
          Length = 342

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDVAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKELDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|328758968|gb|EGF72584.1| alanine racemase protein [Propionibacterium acnes HL025PA2]
          Length = 342

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLTIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSALISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|289427479|ref|ZP_06429192.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J165]
 gi|289159409|gb|EFD07600.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J165]
 gi|313806848|gb|EFS45346.1| alanine racemase protein [Propionibacterium acnes HL087PA2]
 gi|313817636|gb|EFS55350.1| alanine racemase protein [Propionibacterium acnes HL046PA2]
 gi|313821539|gb|EFS59253.1| alanine racemase protein [Propionibacterium acnes HL036PA1]
 gi|313824517|gb|EFS62231.1| alanine racemase protein [Propionibacterium acnes HL036PA2]
 gi|313826862|gb|EFS64576.1| alanine racemase protein [Propionibacterium acnes HL063PA1]
 gi|314926263|gb|EFS90094.1| alanine racemase protein [Propionibacterium acnes HL036PA3]
 gi|314961655|gb|EFT05756.1| alanine racemase protein [Propionibacterium acnes HL002PA2]
 gi|314979928|gb|EFT24022.1| alanine racemase protein [Propionibacterium acnes HL072PA2]
 gi|314987120|gb|EFT31212.1| alanine racemase protein [Propionibacterium acnes HL005PA2]
 gi|314990678|gb|EFT34769.1| alanine racemase protein [Propionibacterium acnes HL005PA3]
 gi|315083072|gb|EFT55048.1| alanine racemase protein [Propionibacterium acnes HL027PA2]
 gi|315086606|gb|EFT58582.1| alanine racemase protein [Propionibacterium acnes HL002PA3]
 gi|315088007|gb|EFT59983.1| alanine racemase protein [Propionibacterium acnes HL072PA1]
 gi|327334117|gb|EGE75832.1| putative alanine racemase [Propionibacterium acnes HL096PA3]
 gi|327444477|gb|EGE91131.1| alanine racemase protein [Propionibacterium acnes HL013PA2]
 gi|328757984|gb|EGF71600.1| alanine racemase protein [Propionibacterium acnes HL020PA1]
 gi|332676740|gb|AEE73556.1| putative alanine racemase [Propionibacterium acnes 266]
          Length = 342

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 97/308 (31%), Gaps = 22/308 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
            L+L ID    +N+  +            V K N YG G E +       G+    V   
Sbjct: 1   MLKLIIDAQRWRNHLTAFAKSCPG--IVPVTKGNGYGFGHELLVQESQRLGIDILAVGVA 58

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E   +R Y     + VL    PG E      N   VI+++ +    + L     S    
Sbjct: 59  QEVASVRQYGWDKDVIVLNPWRPGDEVAAGLLNDPKVITTISRREDIAALRDLAPSASIL 118

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           ++V+T  +R G+   E      + F+ +    ++ +   A  D+             R +
Sbjct: 119 VEVETSMHRHGVPADEVAALDLDGFDLRG--WTIHLPSGASLDEG------------REM 164

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
               K    +        L  + +  L++                           ++ +
Sbjct: 165 ARIVKQHPLASRGIWFSHLSCDDYIALSKKLDVPVRMRVGTRLWLGDANAYRVTGTVLDV 224

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
           R       V Y  + K   D  I V + G A G  L+           +  G +   +  
Sbjct: 225 RWLPKRTPVGYH-RVKTHADGYIVVVSGGTAHGVALSAPISARSLRQWLIPGAEALQQ-- 281

Query: 306 MVPILGKI 313
              ++G++
Sbjct: 282 ---MVGRV 286


>gi|167949693|ref|ZP_02536767.1| alanine racemase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 182

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 4/183 (2%)

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           ++LR       + VL G+   +       + + V     Q     +           L+V
Sbjct: 1   MRLRAAGIDKPLLVLEGVFDAEALRAAAAHQVAVTVHQTQQLELLEQTLLAHPIEVWLKV 60

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISH 188
           D+G +RLG   +                +  +++HLA ADDP    N  Q  RF   I  
Sbjct: 61  DSGMHRLGFRPEAVAAVAQRLQQTPALGVLHLMTHLANADDPQDPANQDQCVRFDA-IDT 119

Query: 189 YKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN---KSHPMQTVVTAEARIILI 245
               + S+A+S+G+L  P       RPGI LYG +       +   ++ V+   A +I +
Sbjct: 120 TPFAQLSIANSAGLLAFPECQRDWVRPGIMLYGVSPFSEGSGEPLGLKPVMRFSAPVIAV 179

Query: 246 RKA 248
            + 
Sbjct: 180 NRY 182


>gi|319785530|ref|YP_004145006.1| alanine racemase domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317171418|gb|ADV14956.1| alanine racemase domain protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 608

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 109/338 (32%), Gaps = 18/338 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            ++ IDL  ++ N  ++         +   V K      G  ++A A+   GV     + 
Sbjct: 4   PQVAIDLGRIERNARTIVERCALSGIKVFGVTKGT---CGMPQVARAMLRGGVAGIAESR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHP 123
            E   +LR     A I +L      + + +  T  I + S +  +   S++    G  H 
Sbjct: 61  FENIRRLRDSGINAPIMLLRSPPMARVEEVVRTVDISLQSELATIREISRIAERMGRVHD 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLERF 182
             L +D G  R G+   + +         K  +++ I ++L C      +  N  QL   
Sbjct: 121 IMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTNLGCFGAIMPTPENLGQLVAH 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
                   G    + S       P         GI+     + I +           A +
Sbjct: 181 AYKTERLSGKSLDVISGGASSSLPLLLEGRLPAGINNLRVGEAILQGGVETFRDVPWAEL 240

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
                 L  +++       L     I  +        P+     D   + +        +
Sbjct: 241 EPDACRLTSDIIEVK----LKPSRPIGQSGYDAFGNQPVFPDEGDRLRAIANIGREDVLV 296

Query: 303 KGYMVPIL-G-KI---TMDMTMFDITD-SLSIEVGDYI 334
           +G + PI  G ++   + D  + D+ D      VGD +
Sbjct: 297 EG-LTPIAKGIRVLGASSDHLLLDVADADPRPSVGDRV 333


>gi|3288711|dbj|BAA31255.1| alanine racemase [Bacillus psychrosaccharolyticus]
          Length = 119

 Score = 72.0 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 1/113 (0%)

Query: 44  GCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI 103
           G  ++A     AG     V  ++E + LR     A I VL    P   +I    ++   +
Sbjct: 1   GDVEVAETAIQAGAGYLAVAFLDEALALRKKGITAPILVLGASRPEDAQIAARESITLTV 60

Query: 104 SSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQ 156
                L      +  G      L+ D+G  R+G+  QE ++       K    
Sbjct: 61  FQAGWLEAAQSFLE-GTVLTIHLKCDSGMGRIGIRKQEEMNEIERFLQKTKCF 112


>gi|225389192|ref|ZP_03758916.1| hypothetical protein CLOSTASPAR_02938 [Clostridium asparagiforme
          DSM 15981]
 gi|225044741|gb|EEG54987.1| hypothetical protein CLOSTASPAR_02938 [Clostridium asparagiforme
          DSM 15981]
          Length = 65

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 1  MHSNEFLRLKIDLTALKNNWHSMN-ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
          M     +   ++L A+ +N   M   L        VVK + YG G   +A    +  V+ 
Sbjct: 1  MRPYNRVYATVNLDAVADNMKEMAGNLPSGTGMIGVVKADGYGHGSVPVA-MAVDPYVRG 59

Query: 60 FFVTSV 65
          F V +V
Sbjct: 60 FAVATV 65


>gi|261885821|ref|ZP_06009860.1| alanine racemase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 154

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 24/175 (13%)

Query: 194 ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGEL 253
               +S+ I     +  +  R GI  +G + + ++S  ++ V++  A  I  R   AG+ 
Sbjct: 2   FHSHNSAAIERTNGFDDEFVRAGIVQFGYS-QFDESLNLKKVLSLWADRISKRVLKAGQS 60

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
           V YGG     +D  IA   + Y DG     +G    H             G    ILGK+
Sbjct: 61  VCYGGAFTAKKDINIATYDLRYGDGLLR-YNGKGDLH----------LANGEK--ILGKM 107

Query: 314 TMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +MD            + GD I +F         A    T +YD+LV++ ++  + 
Sbjct: 108 SMDSF-------SCADSGDQICVFDD---ARVWAKFFDTRSYDILVKLSSKIKRV 152


>gi|242399549|ref|YP_002994974.1| Alanine racemase, N-terminal [Thermococcus sibiricus MM 739]
 gi|242265943|gb|ACS90625.1| Alanine racemase, N-terminal [Thermococcus sibiricus MM 739]
          Length = 354

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 65/341 (19%), Positives = 122/341 (35%), Gaps = 23/341 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           F  L+I+L+A+++N   +             + K  A   G  K+A A+   GVQ    +
Sbjct: 2   FPALEINLSAIEDNVRRVVEFCTSYGINVVGITKG-A--CGEPKVAKAILRGGVQILGDS 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSH 122
            ++  +K++    +A   ++      + + +       + S +  L   SK  +  G  H
Sbjct: 59  RIQNIIKMKESNVKAEFMLIRSPMISEVESVVKYAEYSLNSELKVLEQLSKASLEYGRRH 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLER 181
              + VD G  R G+   E + F   +   K  ++  + ++L C      +  N   L++
Sbjct: 119 KAIIMVDVGDRREGIMPNEFVPFLKEAKKLKGVEIVGVGTNLGCFGGVLPTPRNHEMLKK 178

Query: 182 FRTLISHYKGIEASLASSSGILLGP-------NYHFQLTRPGISLYGGTDKINKSHPMQT 234
               + +  GIE  + SS G ++         +Y     R G  +  GTD     +    
Sbjct: 179 LTEKVKYILGIENPIISSGGTVVLNLLEREQSSYGINQLRIGEGILLGTDSTG--NRTIP 236

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
            +  +   +           S                 I    G     + L      + 
Sbjct: 237 WLRQDTFTLKAEIVEVKWKPSLPEGPV--GKDAFGNTPIFEDLGI-RKRAILALGKQDTE 293

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYI 334
             G      G  V +LG  + D T+ DIT+S   ++VGD +
Sbjct: 294 ISGLFPLYSG--VKVLGGSS-DHTIIDITESKVPLDVGDIV 331


>gi|223042373|ref|ZP_03612422.1| alanine racemase, N- domain family [Staphylococcus capitis SK14]
 gi|222444036|gb|EEE50132.1| alanine racemase, N- domain family [Staphylococcus capitis SK14]
          Length = 351

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 111/334 (33%), Gaps = 31/334 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R+K++L+ ++ N   +  L    +     VVK  A   G E+I   + + G+  F  +
Sbjct: 1   MARIKVNLSKIQYNAKVLQTLLERRQIHFTPVVKCVA---GDERIVSTIKSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++   +LR       +                 ++   + ++ QL   +      V H 
Sbjct: 58  RIDNIERLRDLNITFTLLRPTTEFETMIS-TVKLSIQTELDTIKQLNVIA--KRMNVKHQ 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS-VQLERF 182
             L VD    R G+   + LD+     +    QL  +  +  C    +   N    + +F
Sbjct: 115 IMLMVDWKDGREGVLTYDVLDYIKEIMSMSHIQLVGLAFNFMCFKSKAPEENDVFMINKF 174

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
            + +    G +  + S     + P   +     G        +        T     A +
Sbjct: 175 ISAVEKEIGYKFKIISGGNSSMLPQTMYN--DLGKINELRIGEALFRGIDTTTNEPIASL 232

Query: 243 ILIRKALAGELVSYGGQKK--LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
                 L  E++    +      +  L A+  IGY D +   +  + ++           
Sbjct: 233 YQDAIVLEAEIIEIKPRINQVTHQSYLQAIVDIGYLDTFTDGIKPIAND----------- 281

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                 + ++G  + D  M D+ +    ++GD I
Sbjct: 282 ------LKMVGASS-DHLMIDLNNQDHYQIGDRI 308


>gi|320546815|ref|ZP_08041122.1| hypothetical protein HMPREF0819_0528 [Streptococcus equinus ATCC
           9812]
 gi|320448532|gb|EFW89268.1| hypothetical protein HMPREF0819_0528 [Streptococcus equinus ATCC
           9812]
          Length = 80

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 35  VVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKII 94
           +VK NAYG G  ++A  + +  V  F V++++E ++L+       I +L  I P +  + 
Sbjct: 1   MVKANAYGHGAVQVAQHIRSL-VDGFCVSNIDEAIELQESDITEVILILGIIMPEEIVLA 59

Query: 95  FDTNLIPVISSVPQ 108
               +   + S+  
Sbjct: 60  KKYQITVTVDSMEW 73


>gi|307265382|ref|ZP_07546939.1| alanine racemase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919666|gb|EFN49883.1| alanine racemase domain protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 373

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 102/342 (29%), Gaps = 38/342 (11%)

Query: 11  IDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +DL  L++N   M             +VK          IA    N G + F V +++E 
Sbjct: 14  VDLDKLESNIKEMADTCRKNGKELWPMVKT----HKSTAIAKMQQNYGSKGFLVGTIDEA 69

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            KL     +  +           + I         ++                  G+S  
Sbjct: 70  EKLTENGFKEIMIAYPVASKENIERILTLAQKAHVILSFDGVEAAAKVEETCNRIGLSMD 129

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
           Y + +D+G +R G+  ++ L+      +    +   I +H               +E  +
Sbjct: 130 YLIIIDSGLHRFGVVPEKVLELAEKLKSFTHLKFKGIATHP------GHTYAKRNIEEIK 183

Query: 184 TLISHYKGIEASLASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
            +         + A+         +     + P  +    +  IN   P   V     ++
Sbjct: 184 AVAQEEVEALTTAANILKKEGYSVDIVATGSTPTAAFVVSSKIINILRPGNYVFYDAIQV 243

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
            L    L    ++            + +   G          GLD        + G G +
Sbjct: 244 ALGVSPLEKCALTVLATVIAHPKEDLFIIDAGS------KCFGLDKGAHGVSLINGYGIV 297

Query: 303 KGYMVPI-------LGKITMDMTMFDITDSLSIEVGDYIQIF 337
           KGY   +       +GK+        +T    I+VGD I+I 
Sbjct: 298 KGYPELVVESLSEEVGKV-------KVTAPTDIKVGDKIEII 332


>gi|28572426|ref|NP_789206.1| alanine racemase II [Tropheryma whipplei TW08/27]
 gi|28410557|emb|CAD66943.1| alanine racemase II [Tropheryma whipplei TW08/27]
          Length = 220

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           +  +   +  +  E+ ++  +K  AG  VSY    +   +  +A+  IGYADG P     
Sbjct: 90  LGDNTECKAALHLESCVVTCKKLPAGAGVSYCHTYRTQSEENVALIGIGYADGLPFQAQ- 148

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP 339
                       G   IK    PI+G+I MD  +  +T   S + G  + ++G 
Sbjct: 149 ------------GSVEIKKRKYPIIGRIAMDYMVAKVTPD-SYKHGTRVTVWGE 189



 Score = 40.8 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 38 DNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
           +A+G G  KIA  LY+ GV+  FV    E + L      
Sbjct: 33 ADAFGHGLVKIAYTLYSTGVRKCFVRKAHEKIFLEEIGFT 72


>gi|28493462|ref|NP_787623.1| alanine racemase-like protein [Tropheryma whipplei str. Twist]
 gi|28476503|gb|AAO44592.1| alanine racemase-like protein [Tropheryma whipplei str. Twist]
          Length = 224

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
           +  +   +  +  E+ ++  +K  AG  VSY    +   +  +A+  IGYADG P     
Sbjct: 94  LGDNTECKAALHLESCVVTCKKLPAGAGVSYCHTYRTQSEENVALIGIGYADGLPFQAQ- 152

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGP 339
                       G   IK    PI+G+I MD  +  +T   S + G  + ++G 
Sbjct: 153 ------------GSVEIKKRKYPIIGRIAMDYMVAKVTPD-SYKHGTRVTVWGE 193



 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 38 DNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
           +A+G G  KIA  LY+ GV+  FV    E + L      
Sbjct: 37 ADAFGHGLVKIAYTLYSTGVRKCFVRKAHEKIFLEEIGFT 76


>gi|314934244|ref|ZP_07841603.1| putative amino acid racemase [Staphylococcus caprae C87]
 gi|313652174|gb|EFS15937.1| putative amino acid racemase [Staphylococcus caprae C87]
          Length = 351

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 111/334 (33%), Gaps = 31/334 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R+K++L+ ++ N   +  L    +     VVK  A   G E+I   + + G+  F  +
Sbjct: 1   MARIKVNLSKIQYNAKVLQTLLERRQIHLTPVVKCVA---GDERIVSTIKSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            ++   +LR       +                 ++   + ++ QL   +      V H 
Sbjct: 58  RIDNIERLRDLNITFTLLRPTTEFETMIST-VKLSIQTELETIKQLNVIA--KRMNVKHQ 114

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS-VQLERF 182
             L VD    R G+   + LD+     +    QL  +  +  C    +   N    + +F
Sbjct: 115 IMLMVDWKDGREGVLTYDVLDYIKEIMSMSHIQLVGLAFNFMCFKSKAPEENDVFMINKF 174

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
            + +    G +  + S     + P   +     G        +        T     A +
Sbjct: 175 ISAVEKEIGYKFKIISGGNSSMLPQTMYN--DLGKINELRIGEALFRGIDTTTNEPIASL 232

Query: 243 ILIRKALAGELVSYGGQKK--LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
                 L  E++    +      +  L A+  IGY D +   +  + ++           
Sbjct: 233 YQDAIVLEAEIIEIKPRINQVTHQSYLQAIVDIGYLDTFTDGIKPIAND----------- 281

Query: 301 FIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                 + ++G  + D  M D+ +    ++GD I
Sbjct: 282 ------LKMIGASS-DHLMIDLNNQDHYQIGDRI 308


>gi|242371844|ref|ZP_04817418.1| amino acid racemase [Staphylococcus epidermidis M23864:W1]
 gi|242350351|gb|EES41952.1| amino acid racemase [Staphylococcus epidermidis M23864:W1]
          Length = 353

 Score = 69.7 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 112/335 (33%), Gaps = 31/335 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R+ ++L+ +K N   +  +    +     VVK  A   G E+I   + + G+  F  +
Sbjct: 1   MARINVNLSKIKYNAKVLQTILERKQIHFTPVVKCVA---GDERIVSTIQSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++   +L+         +L      + + +     + + + +  +   + +     V H
Sbjct: 58  RLDNIERLKDL--DVTFTLLRPTTESEFEAMVSKVKMSIQTELHTIKKLNTIAKKLNVKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS-VQLER 181
              L +D    R G+   + LDF     N    QL  +  +  C    +   N    + +
Sbjct: 116 QIMLMIDWKDGREGVLTYDTLDFIKEIMNLNHIQLVGVAFNFMCFKSAAPEENDVFMINK 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F + +    G +  + S     + P   +     G        +        T     A 
Sbjct: 176 FVSAVEKEMGYKFKIISGGNSSMLPQTMYN--DLGKINELRIGEALFRGVDTTTNEPIAS 233

Query: 242 IILIRKALAGELVSYGGQKK--LTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
           +      L  E++    +      +  L A+  IGY D +   +  + ++          
Sbjct: 234 LYQDAIVLEAEIIEIKPRINQLTHQSYLQAIFDIGYLDTFIEGIKPIANDI--------- 284

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                    I+G  + D  M D+ +    ++GD I
Sbjct: 285 --------KIIGASS-DHLMIDLNNQDHYQIGDRI 310


>gi|213024361|ref|ZP_03338808.1| alanine racemase [Salmonella enterica subsp. enterica serovar
          Typhi str. 404ty]
          Length = 42

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGC 45
            + I+  AL++N   +  L+  ++  AVVK NAYG G 
Sbjct: 4  ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGS 42


>gi|13474743|ref|NP_106312.1| hypothetical protein mlr5700 [Mesorhizobium loti MAFF303099]
 gi|14025498|dbj|BAB52098.1| mlr5700 [Mesorhizobium loti MAFF303099]
          Length = 608

 Score = 69.3 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 110/355 (30%), Gaps = 52/355 (14%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYG-LGCEKIAPALYNAGVQDFFVT 63
            ++ IDL  ++ N  ++         +   V K    G  G  ++A A+   GV     +
Sbjct: 4   PQVAIDLGRIERNARTIVDRCALSGIKVFGVTK----GMCGMPQVARAMLRGGVAGIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
             E   +LR     A I +L      + + +  T  I + S +  +   S++    G  H
Sbjct: 60  RFENIRRLRDSGINAPIMLLRSPPMARIEEVVRTVDISLQSELATIREISRIAERMGRVH 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNSVQLER 181
              L +D G  R G+   + +         K  +++ I ++L C      +  N  QL  
Sbjct: 120 DIMLMIDLGDLREGIWPNDLIPTVEQILQFKGVRIAGIGTNLGCFGAIMPTPENLGQLVA 179

Query: 182 FRTLISHYKG-----------------IEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
                    G                 +E  L +    L        + + G+  +    
Sbjct: 180 HAYKTERLSGKSLDWISGGASSSLTLLLEGRLPAGINNLRVGEA---ILQGGVETFRDVP 236

Query: 225 KINKSHPMQTVVTAEARIILIRKALAGEL----VSYGGQKKLTRDSLIAVAAIGYADGYP 280
                     + +    + L      GE                D L A+A IG  D   
Sbjct: 237 WAELEPDACRLTSDIIEVKLKPSRPIGESGYDAFGNQPVFPDEGDRLRAIANIGREDVLV 296

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYI 334
             L+ +                KG    +LG  + D  + D+ D      VGD +
Sbjct: 297 EGLTPIA---------------KGIR--VLGASS-DHLLLDVQDADPRPAVGDRV 333


>gi|237739789|ref|ZP_04570270.1| alanine racemase [Fusobacterium sp. 2_1_31]
 gi|229423397|gb|EEO38444.1| alanine racemase [Fusobacterium sp. 2_1_31]
          Length = 315

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/330 (17%), Positives = 117/330 (35%), Gaps = 29/330 (8%)

Query: 48  IAPALYNAGVQDFFVTSVEEGVKLRLYT----PQARIFVLYGIHPGQEKIIFDTNLIPVI 103
           IA ALY+  V+ + V    E V +  Y           +++        ++     I   
Sbjct: 2   IAKALYDYDVKVWAVARYSEAVSICEYFKTLSIDDFKILIFESLIDDYSLLEKYPQICP- 60

Query: 104 SSVPQLTFYSKLMSCGVSH-PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIIS 162
            ++  +      ++  +S    +L++D GF R G+  +E  +  +      L  LS+   
Sbjct: 61  -TLNSIKDLKNALANNISIDRLSLKIDFGFGRNGIKAEEVDELKNLIKYNSLKFLSIFSH 119

Query: 163 HLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGG 222
             + +      V          ++         L +++GI           R G+  YG 
Sbjct: 120 LFSASYTDGLEVIKK-FTDLVNMLGRNNFEMVHLQNAAGIYNYDVDIVTHIRTGMLTYGL 178

Query: 223 TDKINKSHPMQTVVTAE-ARIILIRKALAGELVSYGGQKKLT-RDSLIAVAAIGYADGYP 280
            +       M+ V T     +  +R     + V+Y     +      IA   IGY DG+ 
Sbjct: 179 QEAGFYDLDMKPVFTGLIGYVDSVRYVNELDYVAYQELSSIDPGTKKIAKIKIGYGDGFS 238

Query: 281 LTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD 340
                                IK     ++ ++TMD T  ++ D   + VGD + ++   
Sbjct: 239 ------------KANNKTTCLIKKKEY-VISQVTMDNTFIEVDD--RVNVGDEVHLY--- 280

Query: 341 IKLDDVALASGTTNYDLLVRIGT-RYAKFY 369
            + +++   +G +  +LL+ I   R  + +
Sbjct: 281 HRPNEIKTKTGFSMLELLIAISPLRVKRIF 310


>gi|302392467|ref|YP_003828287.1| alanine racemase domain protein [Acetohalobium arabaticum DSM 5501]
 gi|302204544|gb|ADL13222.1| alanine racemase domain protein [Acetohalobium arabaticum DSM 5501]
          Length = 360

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 108/352 (30%), Gaps = 45/352 (12%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG--NARTAAVVK---DNAYGLGCEKIAPALYNAGVQD 59
            + RL++DL  +  N   +  L+   +     V K    +       KIA A+   GV  
Sbjct: 2   SYPRLEVDLDKVTANAERIVNLADSEDIEIIGVTKSVCAD------IKIAEAMLAGGVDG 55

Query: 60  FFVTSVEEGVKLRLY--TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
              + ++    ++    +P   + +L      +   + +   I + S +  +    ++  
Sbjct: 56  LADSRIKNLKYMQENLVSPDIPLMLLRIPMISEVDRVVEYADISLNSELEVIKALDQVAK 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                H   L VD G  R G+  ++ +D      + +  +L+ + ++LAC        N+
Sbjct: 116 EMNQKHRIILMVDVGDRREGVMPEDVIDIAAEILDLENIELTGLGTNLACFGGVLPSENN 175

Query: 177 VQL---------ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN 227
           +QL          +F   I    G  +S          P+   QL      L G      
Sbjct: 176 MQLLIDLKNEINNKFGVNIQQISGGNSSSLPRLRNKGLPDEITQLRVGETILLGSNVIDR 235

Query: 228 KSHPMQTVVTAEAR---IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL--- 281
              P     T       I + +K +  E           R             G      
Sbjct: 236 SPFPDTYQETFLLAAEVIEVKKKPVQPEGRRGQNAFGERRKITKTGVRRRAILGIGRQDI 295

Query: 282 TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGD 332
            + GL                           + D  + D+TD    IEVGD
Sbjct: 296 KMKGLTPLAEDIEIEEA---------------SSDHLIIDVTDYEAGIEVGD 332


>gi|222099835|ref|YP_002534403.1| Alanine racemase domain protein [Thermotoga neapolitana DSM 4359]
 gi|221572226|gb|ACM23038.1| Alanine racemase domain protein [Thermotoga neapolitana DSM 4359]
          Length = 375

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 100/341 (29%), Gaps = 29/341 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + R+ I+L  ++ N   +  ++         V K     LG  + A AL  AG++    +
Sbjct: 24  YPRVLINLKEIEENARKVVQMAEKRGIEIVGVTKVT---LGDPRFAEALKRAGIKILGES 80

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSH 122
            ++  ++++    +    +L      +           ++S         +     G + 
Sbjct: 81  RLKNVLRMKKAGIEGPFMLLRLPMMSELVEDVKHFDYIMVSDPKVARMVEELSKETGRNV 140

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
                +D G  R G+  ++A++         +  +                   +   + 
Sbjct: 141 KIIYMIDVGDLREGVWYEKAVEEISQCNPSSISGIGTNFGCYGGIIPTKEKFEMLLSIKE 200

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS---HPMQTVVTAE 239
           +    H   IE     ++  LL                G    + +    + +   ++ +
Sbjct: 201 KLEKEHGFNIEIVSGGNTPTLLALESGEIPEGVNQLRIGEAIALGRDITNNRVIDWLSQD 260

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD-GYPLTL------SGLDSEHSP 292
             I+        E  S        R   +    + + D G             +DS    
Sbjct: 261 TFIVEAEVIEVKEKPSIP---VGRRGLDVFGRKVEFVDRGIRRRAICALGEQDIDSRGLI 317

Query: 293 SVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
            V  G +              + D  + D+T+   ++VGD 
Sbjct: 318 PVDKGVEVLHA----------SSDHIVLDVTEYGDVKVGDV 348


>gi|218515609|ref|ZP_03512449.1| alanine racemase protein [Rhizobium etli 8C-3]
          Length = 68

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 29/46 (63%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYN 54
          L IDL AL  N+  + ++    R  AVVK +AYGLG E++A  LY+
Sbjct: 23 LTIDLAALGRNYLKLASMLAPVRAGAVVKADAYGLGAERVAQTLYD 68


>gi|320096312|ref|ZP_08027876.1| hypothetical protein HMPREF9005_2488 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319976762|gb|EFW08536.1| hypothetical protein HMPREF9005_2488 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 67

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 323 TDSLSIEVGDYIQIFGP----DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           + +    VGD   +FG         D  A A+GT NY+++ R+G    + 
Sbjct: 10  SGAPPARVGDGAVLFGDPATGAPTADQWAAAAGTINYEVVTRLGDHIPRI 59


>gi|302390042|ref|YP_003825863.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200670|gb|ADL08240.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
           16646]
          Length = 355

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 108/345 (31%), Gaps = 27/345 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + R++I+L+ ++ N   +  L   +      + K          +   + + GV+    +
Sbjct: 3   YPRIEINLSLIRENARYIVDLCKRSGIEVMGITKGF---CALLPVVRTMVDGGVKKLGDS 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++    ++    +  I+++    P + + +         S    +   S+     G  H
Sbjct: 60  RIKNIKNMKCSGLEIPIYLIRIPMPSEVEEVVRWADGSFNSEPEVIDLLSEKARALGKIH 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLER 181
              L VD G  R G+  ++  +           +   + +++ C         N+  L  
Sbjct: 120 RVILMVDVGDLREGVMPEDVPEVVGRILEMPGVEFEGLGTNVGCYGGVLPSYENTKILVD 179

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLY----GGTDKINKSHPMQTVVT 237
               I    G+     S                PG++      G     + ++      T
Sbjct: 180 LARDIEKRYGVRVKTISGGNTATLKLVENGRIAPGVNQLRIGEGILLGTDPTNGRNVPGT 239

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           ++A ++L  + +           K+     I           P+       + +      
Sbjct: 240 SQATMVLKAEIIE---------VKVKPSKPIGEIGRDAFGNIPVFEDRGPMKRAIVALGK 290

Query: 298 GKGFIKG-----YMVPILGKITMDMTMFDITDSL-SIEVGDYIQI 336
               I+G       + ILG  + D  + D+T +   I VG  ++ 
Sbjct: 291 QDCRIEGLIPLDESIEILGASS-DHLLLDVTRAKRDIRVGSVVEF 334


>gi|166362859|ref|YP_001655132.1| putative amino acid racemase [Microcystis aeruginosa NIES-843]
 gi|166085232|dbj|BAF99939.1| putative amino acid racemase [Microcystis aeruginosa NIES-843]
          Length = 361

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 98/343 (28%), Gaps = 31/343 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R++I L  +++N   +     S       V K     LG   IA A+   GV     +
Sbjct: 5   LPRIEISLPKIRHNARLLCQFYGSKGLSVMGVSKAI---LGDPSIALAMIQGGVNFIADS 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +E  +K++         +L       E ++   ++                      H 
Sbjct: 62  RIENILKMKQAGIVTTFVLLRTALSQAESVVNIADISLNTELATIQELSYYAQEKQKIHR 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLERF 182
             +  + G  R G+  ++ + F   +      ++  +  +LAC         N  +L   
Sbjct: 122 IIIMTELGDLREGVLPKDLVKFIKKTLAFPFIKIIGLGCNLACYGGIKPDSHNMSKLSVL 181

Query: 183 RTLISHYKGIEASLASSSGILLGPNYH-------FQLTRPGISLYGGTDKINKSHPMQTV 235
              I     I+  + S         Y            R G S+  G + +N+       
Sbjct: 182 TDTIEQEFLIKLPIISGGNSANYQWYQKSSEVGRINNLRLGESILLGCETVNRQVIPGLY 241

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
             A   I  + ++     +  G   +                G                 
Sbjct: 242 TDAFRLIAEVIESKDKPSLPSGEIGR----DAFGNVPSFIDQGIHR--------RVIIAL 289

Query: 296 LGGKGFIKG----YMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                 I G      + ILG  + D  + D + +  ++VG  +
Sbjct: 290 GRQDILISGLQTSQEIKILGSSS-DHLVLD-SHNKRLKVGSEV 330


>gi|254410610|ref|ZP_05024389.1| Alanine racemase, N-terminal domain family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196182816|gb|EDX77801.1| Alanine racemase, N-terminal domain family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 373

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 103/336 (30%), Gaps = 17/336 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R++I L+ +++N   +  L G+       V K     LG   I  A+   GV+    +
Sbjct: 5   MPRIEISLSQIRDNARMLCELYGHRGISLMGVSKAV---LGEPSIVEAMIQGGVKFIADS 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +E   K++      +  +L       E ++   ++                     +H 
Sbjct: 62  RIENIQKMKNAGISTQFVLLRTPFSQAEAVVTSVDISLNTEIETIKQLSYYAKIHNRNHQ 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLERF 182
             + V+ G  R G+   +   F     +    ++  I  +LAC         N  +L   
Sbjct: 122 IIVMVELGDLREGVLPGDLSQFIRKILSLSRIKIVGIGCNLACYGGVKPDKKNMHKLSEL 181

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
              I     I   + S      G + +++  +    +    +       +    T   + 
Sbjct: 182 VNGIQKEFQINLEIISG-----GNSANYEWYKSAQYIGNINNLRLGESILLGRETVNRKA 236

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
           I      A +LV+   + K                  P       S+            +
Sbjct: 237 IPGLHTEAFKLVAEVIESKTKPSLPFGEICQDAFGNVPSFSDRGISQRVIIALGRQDVLV 296

Query: 303 ----KGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                   + ILG  + D  + D   + +++VGD +
Sbjct: 297 SSLKSKKKLEILGASS-DHIILD-GKNHNLQVGDEV 330


>gi|332798070|ref|YP_004459569.1| alanine racemase domain-containing protein [Tepidanaerobacter sp.
           Re1]
 gi|332695805|gb|AEE90262.1| alanine racemase domain protein [Tepidanaerobacter sp. Re1]
          Length = 371

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 13/156 (8%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   E     + +DL  L+NN     AL  + +     ++K         +I      AG
Sbjct: 1   MEKKELQTPAILVDLDILENNIKKAQALCDAHDKELWPMIKT----HKSTEIVKMQQEAG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD-----TNLIPVISSVPQLTF 111
              F   +++E   L     +  ++      P   + + +       +I + +       
Sbjct: 57  AAGFLCGTLDECEGLAKAGIKNIMYAYPVASPVNIQRVIELSKKCNFIIRIDNYDGAKML 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTH 147
                + GV   Y + +D+G +R G+  ++ LDF +
Sbjct: 117 NDAAEAAGVKVNYTIIIDSGLHRFGILPEKVLDFAN 152


>gi|330685135|gb|EGG96799.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis VCU121]
          Length = 359

 Score = 66.2 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 106/333 (31%), Gaps = 33/333 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              +KI+L+ ++ N   +  +  + + +   V+K  A   G  +I   L   G+  F  +
Sbjct: 1   MANIKINLSKIQYNAKVLQTILDAKHIQFTPVIKSIA---GDLQIVQKLIELGITHFADS 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +E   +L          +L      Q   +     I + + +  +   +++     + H
Sbjct: 58  RLENIRQL--TNFDCSFTILRSTQLSQLDNMIKDTQISIQTELNTIIELNRIAQHLNIKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + + +     N    QL  +  +  C         +   + +
Sbjct: 116 QVILMVDWKDGREGVLTYDVVKYIETILNLSHIQLVGVSFNFMCFKSSSPIEDDVFMINK 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           F + I    G    + S     + P   +  L +      G T            V   +
Sbjct: 176 FVSAIEREIGYRMKIVSGGNSSMLPLTMYNDLGKINELRIGETLFRGVDTTTDKPV---S 232

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLI--AVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +      L  E++    +           A+  IGY D     +S + ++         
Sbjct: 233 HLYQDAIVLEAEILEIKPRMNSHTKQSYLQAIVDIGYIDTDTTHISPIANDIQ------- 285

Query: 299 KGFIKGYMVPILGKITMDMTMFDITDSLSIEVG 331
                     I+G  + D  M D+ +    ++G
Sbjct: 286 ----------IIGASS-DHLMIDLNNQDHYQIG 307


>gi|258646332|ref|ZP_05733801.1| amino acid racemase [Dialister invisus DSM 15470]
 gi|260403726|gb|EEW97273.1| amino acid racemase [Dialister invisus DSM 15470]
          Length = 356

 Score = 65.8 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 100/350 (28%), Gaps = 37/350 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + RLKI L  ++ N   +  L      R   V K      G  ++A A    G+     +
Sbjct: 2   YPRLKIYLKRIEENTRVVKQLCAGHGIRVMGVTKA---CCGAPELAEAYLAGGLAMIGDS 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVSH 122
            V    KL     +A  +++      + + +     + + S +  +   +K     G  H
Sbjct: 59  RVANLKKL--ENIEAEKWLIRPPMLSEIEDLVCYADVSLQSEMETVRAINKECEKQGKCH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHN------SFNKKLGQLSLIISHLACADDPSSHVNS 176
              L +D G  R G   +E L             +      +L       AD+       
Sbjct: 117 KIILMMDLGDIREGYVDEEELIAAAVETEKLSRVDLYGIGTNLTCFSFIQADEEK----M 172

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
            +L   R  + +  G    + S      G +    L   G    G     N       + 
Sbjct: 173 ERLAEMRKKVENAAGHTLEIVSG-----GNSAALDLMMRGGICEGVD---NFRLGESLLF 224

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLT--LSGLDSEHSPSV 294
             E            +      +    +            D Y      +    +    +
Sbjct: 225 GKERSRYTFLPGTRNDGFILECEVVEAKVKPSLPWGTAGVDSYGRKPVFTNRGEKRKKVI 284

Query: 295 FLGGKGFIKGYMVP-------ILGKITMDMTMFDITD-SLSIEVGDYIQI 336
              G+                ILG  + D  M D+TD     +VGD +++
Sbjct: 285 CAIGRQDFDAETATPVDEGILILGASS-DHLMLDVTDSVKEYKVGDIVEL 333


>gi|288573583|ref|ZP_06391940.1| alanine racemase domain protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288569324|gb|EFC90881.1| alanine racemase domain protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 353

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 63/347 (18%), Positives = 103/347 (29%), Gaps = 31/347 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            +  L +D   LK N   +         + AAV K   Y  G  +IA     +GV     
Sbjct: 2   RYPALIVDREKLKENTSKLAKECHDRGIKVAAVSK--VY-CGMPEIASVQAESGVDWIAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + +E   K+R         +L      Q +   +   +  +S V      SK        
Sbjct: 59  SRLENLAKMRD--IDIPKILLRLPMISQARETVELADMSFVSEVDTCRALSKAAVAMKKE 116

Query: 123 PYA-LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLE 180
               L VD G  R G+    A+D      +     L  I ++L+C      S  N  QL 
Sbjct: 117 HQVLLMVDVGDLREGVWPDRAVDTAREIASMPGLILKGIGTNLSCYGAVLPSPENLGQLV 176

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                I    GI   + S              +   + L GG  +      +   +T   
Sbjct: 177 SVADSIESECGIHLDIVSGG----------NSSSIRLLLSGGIPERINMLRLGESMTIGK 226

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD----GYPLTLSGLDSEHSPSVFL 296
                          +    ++          IG       G+              V +
Sbjct: 227 ETADCTVIPGLHSDVFTFAAEVIELKTKPSIPIGKKGLDAFGHEPVFEDRGLRKRAIVAV 286

Query: 297 GGKGFI------KGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQI 336
           G +         +     ILG  + D  + D+TD    +++GD I+ 
Sbjct: 287 GQQDMRLDAISPRDKKTDILGASS-DHMILDVTDGERDLKIGDVIEF 332


>gi|310657359|ref|YP_003935080.1| alanine racemase domain-containing protein [Clostridium sticklandii
           DSM 519]
 gi|308824137|emb|CBH20175.1| Alanine racemase domain protein [Clostridium sticklandii]
          Length = 364

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 109/368 (29%), Gaps = 58/368 (15%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVK-DNAYGLGCEKIAPALYNAGV 57
           M +  +  L+IDL  +  N  ++ + +         VVK  ++     +++A     AG 
Sbjct: 1   MENTAYPNLQIDLKKIYQNAKNLVSFANTNGINITGVVKGSDS----SKEVAKEFIKAGC 56

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + +E+  KL+    +  + +L      + + +   + I + S +  L   +    
Sbjct: 57  MGIADSRIEKLAKLKEEGIKEDMMLLRVPMLCEVEQVVRYSEISLNSEIVVLEALNIEAN 116

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALD---FTHNSFNKKLGQLSLIISHLACADDPSSH 173
           +    H   L  D G  R G   +E L        +    L    +  +           
Sbjct: 117 NQNKIHKVILMADLGDLREGYIDEEELIKTALHIETKLDNLHMYGVGTNLGCFGAICPDE 176

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHP 231
            N  +L +    IS   G +  + S       P         GI+    G    + +   
Sbjct: 177 SNLGKLVQISEKISALIGRKLEIVSGGATTSLPLLFDSKMPKGINHLRVGEAMLLARDLI 236

Query: 232 MQTVVTAEA---------------------RIILIRKALAGELVSYGGQKKLTRDSL-IA 269
                + E                       I  I     G    Y  +    R  + + 
Sbjct: 237 DLWGYSMEGYHTDTFVLEAQVIEVKEKPSHPIGRIFVDAFGNTPEYEDKGIRKRALIALG 296

Query: 270 VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSI 328
              IG+ D     L G+  E S S                      D  + D+TD    I
Sbjct: 297 KKDIGHHDSLIPKLKGITVEGSSS----------------------DHVILDVTDAVEEI 334

Query: 329 EVGDYIQI 336
            VGD I+ 
Sbjct: 335 HVGDIIEF 342


>gi|289550210|ref|YP_003471114.1| hypothetical protein SLGD_00839 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289179742|gb|ADC86987.1| Hypothetical protein SLGD_00839 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 362

 Score = 65.5 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 110/350 (31%), Gaps = 57/350 (16%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +L I+L  +K N   + +   S +     VV   A   G  +I   L   G+ +   +
Sbjct: 1   MPKLNINLAKIKYNAQVLQSFLASKDINFTPVVTAIA---GDREILKVLKQVGLTEIADS 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +      R   P     +L       +K I     I V + +  +   +++    G +H
Sbjct: 58  RL--ANIQRFGDPDVNFILLKSHAEDCDKEIIQHVKISVQTELTSIYRLNEVAQTLGTTH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC----ADDPSSHVNSVQ 178
              L VD    R G+   + L + H   + K  ++  +  +       A          Q
Sbjct: 116 QIVLMVDWKDGREGVLTYDVLQYLHEIMSLKHIKVIGLAFNFMSFKSEAPSDDDIFTMNQ 175

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHF------------QLTRPGISLYGGTDKI 226
              F   +    G    L S     + P   +                 G +   G    
Sbjct: 176 ---FICAVEKELGYRLKLISGGNSSMLPQLMYNDLGKINDLRIGDTLFRGENTTSGQPMP 232

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           N     Q  +T EA+II I+  +  E           +  L A+  IGY D     +  +
Sbjct: 233 NL---YQHAITLEAQIIEIKPRVNMET---------KQSYLQAIVNIGYIDTVTNNIQPM 280

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           D                   + I+G  + D  M D+ +    ++GD I  
Sbjct: 281 D-----------------KELKIIGASS-DYLMIDLNNQDGYQLGDTITF 312


>gi|188585830|ref|YP_001917375.1| alanine racemase domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350517|gb|ACB84787.1| alanine racemase domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 360

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 98/349 (28%), Gaps = 34/349 (9%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG--NARTAAVVK---DNAYGLGCEKIAPALYNAGVQD 59
              R++I    +  N   +   +   N     V K    +       +I  A    G+  
Sbjct: 4   RSPRVEIYADRIAYNVEYLQKQAAKNNISLVGVTKGVLAD---H---QILDAYLKGGLDY 57

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSC 118
                ++   ++R Y    +  +L      +   + +   + + S +  L     +    
Sbjct: 58  LGDARIQNLKRVRDYGFSGKTLLLRAPMYSEISQVINFANVSLNSELDTLKLLDEESKKQ 117

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
           G +H Y + VD G  R G+  ++   F   +   +  +   +  ++ C         + Q
Sbjct: 118 GKTHGYIIMVDVGDRREGVLPEDVKSFVKEAIKLENVKFEGLGLNVGCFGGVLPTTENAQ 177

Query: 179 LERFRTLISHYKGIE--------ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           +          +GIE            +       P    QL      L G         
Sbjct: 178 ILIDLKSELEQEGIEVPTISGGSTCGLNIMFHNQLPEGINQLRVGEAFLIGNDSVRETPI 237

Query: 231 P--MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           P   Q        II I+   +      G                G        +   D 
Sbjct: 238 PGTYQDTFRLVTEIIEIKDRPSQPEGEIGKDPFGNVPEF---PDRGIRKRAIAAIGKQDV 294

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQI 336
                +    +  I+G         + D  + DITD   + ++GD I  
Sbjct: 295 AIGSLLPEDEQVTIEGA--------SSDHLILDITDSDHNYKIGDEITF 335


>gi|254976416|ref|ZP_05272888.1| putative amino acid racemase [Clostridium difficile QCD-66c26]
 gi|255093801|ref|ZP_05323279.1| putative amino acid racemase [Clostridium difficile CIP 107932]
 gi|255315553|ref|ZP_05357136.1| putative amino acid racemase [Clostridium difficile QCD-76w55]
 gi|255518216|ref|ZP_05385892.1| putative amino acid racemase [Clostridium difficile QCD-97b34]
 gi|255651332|ref|ZP_05398234.1| putative amino acid racemase [Clostridium difficile QCD-37x79]
 gi|260684394|ref|YP_003215679.1| putative amino acid racemase [Clostridium difficile CD196]
 gi|260688053|ref|YP_003219187.1| putative amino acid racemase [Clostridium difficile R20291]
 gi|306521163|ref|ZP_07407510.1| putative amino acid racemase [Clostridium difficile QCD-32g58]
 gi|260210557|emb|CBA65100.1| putative amino acid racemase [Clostridium difficile CD196]
 gi|260214070|emb|CBE06245.1| putative amino acid racemase [Clostridium difficile R20291]
          Length = 370

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 92/334 (27%), Gaps = 24/334 (7%)

Query: 12  DLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL  L+ N   +  +    N +   ++K          IA    NAG   F V +++EG 
Sbjct: 14  DLDQLEKNIDKIQQICTNNNKQLWPMLKT----HKSTYIARLQKNAGASGFLVGTLDEGE 69

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTN-----LIPVISSVPQLTFYSKLMSCGVSHPY 124
            L     +  +     +       I         +    +      +        +    
Sbjct: 70  ALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAKAYSEAFSKSKIECKL 129

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VD G +R G+  ++ ++        +  ++  I SH       SS            
Sbjct: 130 LIIVDCGLHRFGVEPEKVVELATEISKLENIKIVGISSHPGQVYGCSSPE-----GVPDV 184

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            +     +E +  + +            + P +     +  I    P   V     +I L
Sbjct: 185 CVQEDSSMEKAYKALTDNGFNIEIVASGSTPTVEAEAASKTITAVRPGNYVYYDAIQIGL 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
                    ++          S   +   G    G      G  S        G      
Sbjct: 245 GCATEDMCALTVVCTVISKNSSGYYLIDCGSKCLGLDKGAHGNSSIVGYGRVCGHPELTI 304

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
             +   +GKI        +     I++GD I+I 
Sbjct: 305 DSLSEEVGKI-------KVNGETDIKIGDRIRII 331


>gi|315659158|ref|ZP_07912022.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
 gi|315495583|gb|EFU83914.1| conserved hypothetical protein [Staphylococcus lugdunensis M23590]
          Length = 362

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 63/350 (18%), Positives = 109/350 (31%), Gaps = 57/350 (16%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             +L I+L  +K N   + +   S +     VV   A   G  +I   L   G+ +   +
Sbjct: 1   MPKLNINLAKIKYNAQVLQSFLASKDINFTPVVTAIA---GDREILKVLKQVGLTEIADS 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +      R   P     +L       +K I     I V + +  +   +++    G +H
Sbjct: 58  RL--ANIQRFGDPDVNFILLKSHAEDCDKEIIQHVKISVQTELTSIYRLNEVAQTLGTTH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC----ADDPSSHVNSVQ 178
              L VD    R G+   + L + H   + K  ++  +  +       A          Q
Sbjct: 116 QIVLMVDWKDGREGVLTYDVLQYLHEIMSLKHIKVIGLAFNFMSFKSEAPSDDDIFTMNQ 175

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHF------------QLTRPGISLYGGTDKI 226
              F   +    G    L S     + P   +                 G +   G    
Sbjct: 176 ---FICAVEKELGYRLKLISGGNSSMLPQLMYNDLGKINDLRIGDTLFRGENTTSGQPMP 232

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
           N     Q  +T EA+II I+              K  +  L A+  IGY D     +  +
Sbjct: 233 NL---YQHAITLEAQIIEIKP---------RVNMKTKQSYLQAIVNIGYIDTVTNNIQPM 280

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           D                   + I+G  + D  M D+ +    ++GD I  
Sbjct: 281 D-----------------KELKIIGASS-DYLMIDLNNQDGYQLGDTITF 312


>gi|255656805|ref|ZP_05402214.1| putative amino acid racemase [Clostridium difficile QCD-23m63]
 gi|296452364|ref|ZP_06894066.1| serine racemase [Clostridium difficile NAP08]
 gi|296877713|ref|ZP_06901741.1| serine racemase [Clostridium difficile NAP07]
 gi|296258793|gb|EFH05686.1| serine racemase [Clostridium difficile NAP08]
 gi|296431335|gb|EFH17154.1| serine racemase [Clostridium difficile NAP07]
          Length = 370

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 92/334 (27%), Gaps = 24/334 (7%)

Query: 12  DLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL  L+ N   +  +    N +   ++K          IA    NAG   F V +++EG 
Sbjct: 14  DLDQLEKNIDKIQQICTNNNKQLWPMLKT----HKSTYIARLQKNAGASGFLVGTLDEGE 69

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFD-----TNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            L     +  +     +       I         +    +      +        +    
Sbjct: 70  ALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAKAYSEAFSKSKLECKL 129

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VD G +R G+  ++ ++        +  ++  I SH       SS            
Sbjct: 130 LIIVDCGLHRFGVEPEKVVELATEISKLENIKIVGISSHPGQVYGCSSPE-----GVPDV 184

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            +     +E +  + +            + P +     +  I    P   V     +I L
Sbjct: 185 CVQEDSSMEKAYKALTDNGFNIEIVASGSTPTVEAEAVSKTITAVRPGNYVYYDAIQIGL 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
                    ++          S   +   G    G      G  S        G      
Sbjct: 245 GCATEDMCALTVVCTVISKNSSGYYLIDCGSKCLGLDKGAHGNSSIVGYGRVCGHPELTI 304

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
             +   +GKI        +     I++GD I+I 
Sbjct: 305 DSLSEEVGKI-------KVNGETDIKIGDRIRII 331


>gi|126700435|ref|YP_001089332.1| putative amino acid racemase [Clostridium difficile 630]
 gi|115251872|emb|CAJ69707.1| putative amino acid racemase [Clostridium difficile]
          Length = 370

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 91/334 (27%), Gaps = 24/334 (7%)

Query: 12  DLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL  L+ N   +  +    N +   ++K          IA    NAG   F V +++EG 
Sbjct: 14  DLDQLEKNIDKIQQICTNNNKQLWPMLKT----HKSTYIARLQKNAGASGFLVGTLDEGE 69

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTN-----LIPVISSVPQLTFYSKLMSCGVSHPY 124
            L     +  +     +       I         +    +      +        +    
Sbjct: 70  ALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAKAYSEAFSKSKIECKL 129

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VD G +R G+  ++ ++        +  ++  I SH       SS            
Sbjct: 130 LIIVDCGLHRFGVEPEKVVELATEISKLENIKIVGISSHPGQVYGCSSPE-----GVPDV 184

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            +     +E +  + +            + P +        I    P   V     +I L
Sbjct: 185 CVQEDSSMEKAYKALTDNGFNIEIVASGSTPTVESEAACKTITAVRPGNYVYYDAIQIGL 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
                    ++          S   +   G    G      G  S        G      
Sbjct: 245 GCATEDMCALTVVCTVISKNSSGYYLIDCGSKCLGLDKGAHGNSSIVGYGRVCGHPELTI 304

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
             +   +GKI        +     I++GD I+I 
Sbjct: 305 DSLSEEVGKI-------KVNGETDIKIGDRIRII 331


>gi|159044841|ref|YP_001533635.1| putative amino acid racemase [Dinoroseobacter shibae DFL 12]
 gi|157912601|gb|ABV94034.1| putative amino acid racemase [Dinoroseobacter shibae DFL 12]
          Length = 373

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            RL++DL  +++N  ++   L+       AV K      G   IA A+   G        
Sbjct: 4   PRLEVDLCKIRHNAQTLAGRLTPRGLGITAVTKAV---CGNPAIARAMLEGGAVGLAEAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP- 123
           +    +LR       + ++      +   +         S +  ++  S       +   
Sbjct: 61  LRNVRRLREAGLTCAVTLIRTPMLSEAAEVVRLCETSFNSDLRVISALSAESCPRRAAHG 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             L V+ G  R G+  +E               L  I ++ AC
Sbjct: 121 IILMVEMGDLREGILPEELGALALRVRALPGVVLQGIGANFAC 163


>gi|239636176|ref|ZP_04677180.1| alanine racemase domain protein [Staphylococcus warneri L37603]
 gi|239598192|gb|EEQ80685.1| alanine racemase domain protein [Staphylococcus warneri L37603]
          Length = 359

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 107/334 (32%), Gaps = 35/334 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+L+ ++ N   +  +  + + +   V+K  A   G  ++   L + G+  F  +
Sbjct: 1   MANININLSKIQYNAKVLQTILDAKHIQFTPVIKSIA---GDRQVVQKLIDLGITHFADS 57

Query: 64  SVEEGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
            +E    +R  T       +L      Q   +     I + + +  +   +++     + 
Sbjct: 58  RLE---NIRQLTDFDCSFTILRSTQLSQLDNMIKNAQISIQTELNTILELNRIAEQLNLK 114

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLE 180
           H   L VD    R G+   + + +     N    QL  +  +  C         +   + 
Sbjct: 115 HQVILMVDWKDGREGVLTYDVVKYIETILNLSHIQLIGLSFNFMCFKSGTPIEDDVFMIN 174

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHF-QLTRPGISLYGGTDKINKSHPMQTVVTAE 239
           +F + I    G    + S     + P   +  L +      G T            V   
Sbjct: 175 KFVSAIEREIGYRMKIVSGGNSSMLPLTMYNDLGKINELRIGETLFRGVDTTTDKPV--- 231

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLI--AVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
           + +      L  E++    +           A+  IGY D         D+ H   +   
Sbjct: 232 SHLYQDAIVLEAEILEIKPRMNSHTKQSYLQAIVDIGYID--------TDTTHINPIAND 283

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVG 331
            +         I+G  + D  M D+ +    ++G
Sbjct: 284 IQ---------IIGASS-DHLMIDLNNQDHYQIG 307


>gi|254552528|ref|ZP_05142975.1| alanine racemase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
          Length = 63

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 320 FDITDSLSIEVGDYIQIFGPDI----KLDDVALASGTTNYDLLVRIGTRYAKFY 369
            D   +L +  GD   +FGP I       D A   GT +Y+++     R  + Y
Sbjct: 4   VDWARALDVAEGDEAILFGPGIRGEPTAQDWADLVGTIHYEVVTSPRGRITRTY 57


>gi|170289049|ref|YP_001739287.1| alanine racemase domain-containing protein [Thermotoga sp. RQ2]
 gi|170176552|gb|ACB09604.1| alanine racemase domain protein [Thermotoga sp. RQ2]
          Length = 353

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 95/338 (28%), Gaps = 23/338 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + RL I+L  ++ N   +  ++         V K     LG  + A  L  AG++    +
Sbjct: 2   YPRLLINLKEIEENAKKVVEMASRRGIEIVGVTKVT---LGDPRFAETLRKAGIRILGES 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
            ++  ++++    +    +L      +           ++S                 + 
Sbjct: 59  RIKNVLRMKKAGIEGPFMLLRLPMMSELVEDVRHFDYIMVSDPDVAKKVDELSREIKRNV 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
                +D G  R G+  ++A++         +  +                   +   + 
Sbjct: 119 KIIYMIDVGDLREGVWFEKAVEEIAQCKGANVVGIGTNFGCYGGIIPTREKFEILLDIKE 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHF-----QLTRPGISLYGGTDKINKSHPMQTVVT 237
           +   ++   IE     ++  L               R G ++  G D  N          
Sbjct: 179 KLEKNYGFNIEIVSGGNTPALYALENDEIPEGINQLRIGEAIVLGRDITNNRVIDWLSQD 238

Query: 238 AEARIILIRKALAGELVSYGGQ--KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                  + +    + V  G +      R        I       L    +DS     V 
Sbjct: 239 TFLIEAEVIEVKEKQSVPLGKRGLDVFGRKIEFVDRGIRKRAICALGEQDIDSRGLIPVD 298

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
            G +              + D  + D+TD   ++VGD 
Sbjct: 299 KGVEVLHA----------SSDHIVLDVTDFGDVKVGDV 326


>gi|148270325|ref|YP_001244785.1| alanine racemase domain-containing protein [Thermotoga petrophila
           RKU-1]
 gi|147735869|gb|ABQ47209.1| alanine racemase domain protein [Thermotoga petrophila RKU-1]
          Length = 353

 Score = 63.5 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 95/338 (28%), Gaps = 23/338 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + RL I+L  ++ N   +  ++         V K     LG  + A  L  AG++    +
Sbjct: 2   YPRLLINLKEIEENAKKVVEMASRRGIEIVGVTKVT---LGDPRFAETLRKAGIKILGES 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
            ++  ++++    +    +L      +           ++S                 + 
Sbjct: 59  RIKNVLRMKKAGIEGPFMLLRLPMMSELVEDVRHFDYIMVSDPDVAKKVDELSREIKRNV 118

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
                +D G  R G+  ++A++         +  +                   +   + 
Sbjct: 119 KIIYMIDVGDLREGVWFEKAVEEIAQCKGTNVVGIGANFGCYGGIIPTREKFEILLDIKE 178

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHF-----QLTRPGISLYGGTDKINKSHPMQTVVT 237
           +   +H   IE     ++  L               R G ++  G D  N          
Sbjct: 179 KLEKNHGFNIEIVSGGNTPALYALENDEIPEGINQLRIGEAIVLGRDITNNRVIDWLSQD 238

Query: 238 AEARIILIRKALAGELVSYGGQ--KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                  + +    + V  G +      R        I       L    +DS     V 
Sbjct: 239 TFLIEAEVIEVKEKQSVPLGKKGLDVFGRKIEFVDRGIRKRAICALGEQDIDSRGLIPVD 298

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
            G +              + D  + D+TD   ++VGD 
Sbjct: 299 KGVEVLHA----------SSDHIVLDVTDFGDVKVGDV 326


>gi|254429781|ref|ZP_05043488.1| Alanine racemase, N-terminal domain family [Alcanivorax sp. DG881]
 gi|196195950|gb|EDX90909.1| Alanine racemase, N-terminal domain family [Alcanivorax sp. DG881]
          Length = 362

 Score = 63.1 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 6/163 (3%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            RL I+L  + +N   +    G+   A   V K  A  LG   IA A+  AG+     + 
Sbjct: 4   PRLDINLDKISHNARMLVEDLGDRGIAVTGVTKA-A--LGSLDIAKAMLRAGMSGLGDSR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           +E    +R     A I ++      Q + +     I   + +  +    +       SH 
Sbjct: 61  IENIEAMRQQRISAPIMLIRSPMLSQVERVVRNADISFNTELSVVRRLSAAAEEAERSHG 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             L V+ G  R G+  ++ +            +L+ I ++LAC
Sbjct: 121 IMLMVELGDLREGILPEDLVSAAREVMRLPNLELTGIGTNLAC 163


>gi|291166503|gb|EFE28549.1| amino acid racemase [Filifactor alocis ATCC 35896]
          Length = 370

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 100/346 (28%), Gaps = 20/346 (5%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKD-NAYGLGCEKIAPALYNAGVQ 58
              ++  ++I+L  L  N  ++             VVK  ++Y      I+  L +AG  
Sbjct: 3   KKIQYPIMEINLNHLYENAKNIVEQCKKHGISVTGVVKGTDSYEHSYNTISNTLLDAGCT 62

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
               + +   +++R Y  + R+ +L      +   +       + SS+  L   ++    
Sbjct: 63  SIADSRMNTIIQMRNYGFEGRLLLLRVPMISELDDVVHYADCSLQSSLTVLEKTNETASK 122

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDF---THNSFNKKLGQLSLIISHLACADDPSSHV 174
             + H   L +D G  R G   +  L           K L    +  +            
Sbjct: 123 HNIIHDVILMMDLGDLREGFFDENELIHVASIVEKKMKHLHLKGIGTNLGCYGSIRPDTS 182

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGP-------NYHFQLTRPGISLYGGTDKIN 227
           N  +L      I  + G +  + S       P              R G  +    D I+
Sbjct: 183 NLGRLVSIAEKIEFHIGRKLEIISGGATSSLPLVLNGSIPKRINHLRVGEGIVLSRDLID 242

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
             +     +  +   I        E  SY                     G       L 
Sbjct: 243 IWNIDMPFMHKDVYTISAEVIEVREKPSYPIGTIFV--DAFGNKPEYIDKGIRKKA--LL 298

Query: 288 SEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGD 332
           +     V       +K     I+G  + D  + DI D    I+ GD
Sbjct: 299 AIGKRDVGSVDSLIVKLENAEIIGGSS-DHLILDIEDVKEDIKEGD 343


>gi|228474827|ref|ZP_04059558.1| alanine racemase domain protein [Staphylococcus hominis SK119]
 gi|228271490|gb|EEK12858.1| alanine racemase domain protein [Staphylococcus hominis SK119]
          Length = 353

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 60/373 (16%), Positives = 129/373 (34%), Gaps = 49/373 (13%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R+ I+L+ ++ N H +  L  S N     V+K  A   G E I   L   G   F  +
Sbjct: 1   MSRIVINLSKIEYNAHVLKMLFDSKNIAIIPVIKSIA---GDEHIIKRLMKVGFNYFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +E   +   +T   +  +L      Q + +   + + + + +  +   + + +      
Sbjct: 58  RLENIPQ--QFTKDCQFLLLRSPLKRQYEDLIKESYVSIQTEMVTIRQLNHIATEMSHQH 115

Query: 124 YAL-QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV-QLER 181
             +  VD    R G+   + +++ +        +L  +  +  C    +  +N + ++ +
Sbjct: 116 QVILMVDWKDQREGVLPYDIVEYINEIKLMNNIKLLGLAFNFMCFKSKAPTLNDIDEINQ 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           F   + +  G+   + S     + P    + L        G T                 
Sbjct: 176 FVHHVQYETGVSFEVISGGNSSMLPLLKQYDLGCINELRIGETLFRGVDTTTNE---NIP 232

Query: 241 RIILIRKALAGELVSYGGQK-KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +      L  E++    +  K     L A+  +GY D               +V    K
Sbjct: 233 ELFQNAILLEAEIIEIKPRYTKTKESYLQAIVDVGYID---------------TVIEKIK 277

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLV 359
                + + I+G  + D  M D+ + ++ +VGD   +F     L+          Y+ L 
Sbjct: 278 PL--NHRIEIMGASS-DHLMIDLKEEINYKVGD-CILF----SLE----------YEALS 319

Query: 360 RI--GTRYAKFYT 370
           ++    R  K+Y+
Sbjct: 320 QLMYHQRMEKYYS 332


>gi|220932749|ref|YP_002509657.1| alanine racemase domain protein [Halothermothrix orenii H 168]
 gi|219994059|gb|ACL70662.1| alanine racemase domain protein [Halothermothrix orenii H 168]
          Length = 357

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 110/351 (31%), Gaps = 32/351 (9%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           M +    R+ I+L  ++ N    N            VVK  A   G  K+      AG+ 
Sbjct: 1   MKT---PRVNINLPRIRENASIFNRKCQQQGISLTGVVKVMA---GDLKVIKTFVQAGLT 54

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
               + +    K+R       + +L      +   +   + I + S V  +   S+    
Sbjct: 55  SLGDSRLYNLKKIREAGIGVELMLLRLPRLDEVSDVIKYSDISLNSEVTVIEALSREAIK 114

Query: 119 -GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NS 176
              SH   + VD G  R G+  ++  +F     +     +  + +++ C         N+
Sbjct: 115 VNRSHDIIVMVDVGDLREGVLPEDISEFFGKIIDLPGINIKGLGTNVGCYGGVLPTYKNT 174

Query: 177 VQLERFRTLISHYKGIEASLASSSG--------ILLGPNYHFQLTRPGISLYGGTDKINK 228
             L   +  +    G+   + S               P+    L      L G     N+
Sbjct: 175 NLLIELKEKMEVKYGVHLPVISGGNSATTYLLDRNELPSGVNNLRVGEGILRGVYPTFNE 234

Query: 229 --SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                 Q  +T  A II ++            + ++ RD+           G        
Sbjct: 235 IIEGVNQNCITLTASIIEVKD------KPSVPRGRIGRDA-FGNKPRFEDRGIRRRAILA 287

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI 336
                  +         G  V ++G  + D  + DIT++   + VGD ++ 
Sbjct: 288 VGRQDVKISGLDPVL-DG--VEVIGASS-DHLIVDITEARYDLSVGDELEF 334


>gi|325001373|ref|ZP_08122485.1| alanine racemase [Pseudonocardia sp. P1]
          Length = 47

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 11 IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALY 53
          +DL A+++N   ++ L+    A T  VVK + YG G   +A A  
Sbjct: 2  VDLDAVRHNVAYLSGLAARSGAATMVVVKADGYGHGAAGVARAAL 46


>gi|314922754|gb|EFS86585.1| alanine racemase protein [Propionibacterium acnes HL001PA1]
          Length = 362

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + GV
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGV 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVHLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVN 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC      S  N
Sbjct: 116 RAGTHHGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSIEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHF-------------QLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  H                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGHI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|282852965|ref|ZP_06262302.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J139]
 gi|282582418|gb|EFB87798.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J139]
 gi|314983015|gb|EFT27107.1| alanine racemase protein [Propionibacterium acnes HL110PA3]
 gi|315091522|gb|EFT63498.1| alanine racemase protein [Propionibacterium acnes HL110PA4]
          Length = 362

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 112/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + GV
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGV 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVN 175
             G  H   + VD    R G+     +D   ++       +  + ++LAC      S  N
Sbjct: 116 RAGTHHGVIVMVDVSDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSIEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  H                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGHI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|314965673|gb|EFT09772.1| alanine racemase protein [Propionibacterium acnes HL082PA2]
 gi|315094623|gb|EFT66599.1| alanine racemase protein [Propionibacterium acnes HL060PA1]
 gi|315105342|gb|EFT77318.1| alanine racemase protein [Propionibacterium acnes HL050PA2]
 gi|327328854|gb|EGE70614.1| amino acid racemase [Propionibacterium acnes HL103PA1]
          Length = 362

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 61/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + GV
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGV 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVN 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC      S  N
Sbjct: 116 RAGTHHGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSIEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  H                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGHI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|319400063|gb|EFV88301.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis FRI909]
          Length = 353

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 101/339 (29%), Gaps = 41/339 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++++L+ +K N   + +L          V+K  A   G + I  ++ + G+  F  +
Sbjct: 1   MANVRVNLSKIKYNAKVLQSLLECKQIHFTPVIKCVA---GDKHIVSSIKSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++   +L+       +           + +     + + + +  +   + L     + H
Sbjct: 58  RLDNIEQLKDLGITFTLL--RPTVEADLEKMISRVEMSIQTELTTIKKLNTLAKSLDIKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + + +          QL  +  +  C   +  +  +   + +
Sbjct: 116 QIMLMVDWKDGREGVLTYDVVRYVQEILKLSHIQLVGLAFNFMCFKSEAPNEKDVRMINK 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F   +      +  + S     + P   +                            + R
Sbjct: 176 FIHDVESETHFKFRIISGGNSSMLPQTLYNHLD---------------------KINDLR 214

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG- 300
           I            ++             V      +  P      +  +  ++   G   
Sbjct: 215 IGEALLRGIDTTTNHSINSL---YQNAIVLEAEIIEIKPRLYQKNNQSYLQAIVDIGYLD 271

Query: 301 -FIKGYM-----VPILGKITMDMTMFDITDSLSIEVGDY 333
            FI+G       + ILG  + D  M D+ +    ++GD 
Sbjct: 272 TFIEGIKPLGDDIRILGASS-DHLMIDLNNQDHYQIGDK 309


>gi|242399214|ref|YP_002994638.1| putative amino acid racemase [Thermococcus sibiricus MM 739]
 gi|242265607|gb|ACS90289.1| putative amino acid racemase [Thermococcus sibiricus MM 739]
          Length = 375

 Score = 62.0 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 97/344 (28%), Gaps = 36/344 (10%)

Query: 9   LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           + +DL  L+ N   +   +   N +   +VK          +A     AG   F   +++
Sbjct: 12  VVVDLDKLEFNIKEVAKEAKKHNKQLFPMVKT----HKSVYVANLQKKAGAGGFLCGTID 67

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDT------NLIPVISSVPQLTFY-SKLMSCG 119
           E   L        + + Y I   +              +I  I SV    F  ++L   G
Sbjct: 68  EAEALAEAGLGETLMLAYPIMDKENFSRVARLIEDGLRVIFRIDSVDAAEFLDAELKKRG 127

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH----VN 175
           +   + + VDTG  R G+  ++  +F          +   I +H     + ++       
Sbjct: 128 LRAEFTIIVDTGGVRYGIEPEKVGNFAKRVKEYSNLEFVGITTHPGHVYNATNPKEVKAI 187

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTR--PGISLYGGTDKINKSHPMQ 233
           + Q  +   +               GI   P + F +          G     ++   + 
Sbjct: 188 AEQATKGMKIALRSLRQWNMNPEIVGIGSTPTFRFDIEEEIYTHLFPGNYVYYDRQQALI 247

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
                  R  L                         +   G           L S     
Sbjct: 248 FGSANLERCALTIFVTV-------TSIAERCGKRFGLINAGSLYFDKRGHEILGSFGQAV 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
            +   K          +GKI       D+T+   ++VG+ I + 
Sbjct: 301 EYPRAKLIGLSQE---VGKI-------DVTNEPDVKVGEKINVI 334


>gi|294616334|ref|ZP_06696127.1| alanine racemase [Enterococcus faecium E1636]
 gi|291590848|gb|EFF22564.1| alanine racemase [Enterococcus faecium E1636]
          Length = 48

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 33 AAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           AVVK NAYG G   +A  L   GV +F V 
Sbjct: 1  MAVVKANAYGHGAIPVAKTLQKIGVMNFAVA 31


>gi|314969166|gb|EFT13264.1| alanine racemase protein [Propionibacterium acnes HL037PA1]
          Length = 362

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + G+
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGI 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-N 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC       V N
Sbjct: 116 RAGTRHGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSVEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  +                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGNI-----------------VLGASS-DHIIVDMTDSSESVEIGTEVRFW 337


>gi|242244000|ref|ZP_04798443.1| amino acid racemase [Staphylococcus epidermidis W23144]
 gi|242232633|gb|EES34945.1| amino acid racemase [Staphylococcus epidermidis W23144]
          Length = 353

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/339 (12%), Positives = 101/339 (29%), Gaps = 41/339 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++++L+ +K N   + +L          V+K  A   G + I  ++ + G+  F  +
Sbjct: 1   MANVRVNLSKIKYNAKVLQSLLECKQIHFTPVIKCVA---GDKHIVSSIKSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++   +L+       +           + +     + + + +  +   + L     + H
Sbjct: 58  RLDNIEQLKDLGITFTLL--RPTVKADLEKMISRVEMSIQTELTTIKKLNTLAKSLDIKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + + +          QL  +  +  C   +  +  +   + +
Sbjct: 116 QIMLMVDWKDGREGVLTYDVVRYVQEILKLSHIQLVGLAFNFMCFKSEAPNEKDVRMINK 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F   +      +  + S     + P   +                            + R
Sbjct: 176 FIHDVESETHFKFRIISGGNSSMLPQTLYNHLD---------------------KINDLR 214

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG- 300
           I            ++             V      +  P      +  +  ++   G   
Sbjct: 215 IGEALLRGIDTTTNHSINSL---YQNAIVLEAEIIEIKPRIYQKNNQSYLQAIVDIGYLD 271

Query: 301 -FIKGYM-----VPILGKITMDMTMFDITDSLSIEVGDY 333
            FI+G       + ILG  + D  M D+ +    ++GD 
Sbjct: 272 TFIEGIKPLGDDIRILGASS-DHLMIDLNNQDHYQIGDK 309


>gi|254430666|ref|ZP_05044369.1| amino acid racemase [Cyanobium sp. PCC 7001]
 gi|197625119|gb|EDY37678.1| amino acid racemase [Cyanobium sp. PCC 7001]
          Length = 369

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/350 (16%), Positives = 105/350 (30%), Gaps = 25/350 (7%)

Query: 7   LRLKIDLTALKNNWHSM-NALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            RL+I+L+ L +N  ++   L+        V K     LG  +I      AG+     + 
Sbjct: 4   PRLEINLSHLHHNARTLVRRLARQGIAVTGVSKAV---LGMPEIVRTWLAAGLGSIGESR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSHP 123
           ++    L     QA + ++      Q   +     I   +    L   +      G  H 
Sbjct: 61  LDTAEALARGGLQAPLLMIRTPMLSQVARVVAHAAISCNTEPRVLEALAVAARKQGRRHG 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLERF 182
             L V+ G  R G+   +       +      QL  I S+L C         N  +L   
Sbjct: 121 VLLMVELGDLREGILPGDLERIAQLTLALPSLQLVGIGSNLGCQHGVAPDAANMAELSEL 180

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHF-------QLTRPGISLYGGTDKINKSHPMQTV 235
              +         L S       P              R G +L  G + + +S      
Sbjct: 181 AETLEARLSTRLQLISGGNSANLPWLAQGGAPGRINHLRLGEALLLGREPLGRSAIPGLH 240

Query: 236 VTAEARIILIRKALAGELVSYGGQKKLT--RDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             A   +  + +      +++G +   +       A       D     L  L  + S  
Sbjct: 241 TNAFRLVGEVIEVKTKPGLAWGSRGLTSFMAPGGPAGLPCHDRDPRQRGLLALGVQDSDP 300

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKL 343
             L     +      I+G  + D  +  +     + VG+ +  FGP    
Sbjct: 301 AGLEPPPGVA-----IVGASS-DHLV--LESLHPLTVGEEVG-FGPSYSA 341


>gi|15644345|ref|NP_229397.1| hypothetical protein TM1597 [Thermotoga maritima MSB8]
 gi|281412630|ref|YP_003346709.1| alanine racemase domain protein [Thermotoga naphthophila RKU-10]
 gi|4982168|gb|AAD36664.1|AE001804_8 hypothetical protein TM_1597 [Thermotoga maritima MSB8]
 gi|281373733|gb|ADA67295.1| alanine racemase domain protein [Thermotoga naphthophila RKU-10]
          Length = 354

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 92/338 (27%), Gaps = 23/338 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + RL I+L  ++ N   +  ++         V K     LG  + A  L  AG+     +
Sbjct: 3   YPRLLINLKEIEENARKVVEMASRRGIEIVGVTKVT---LGDPRFAETLRKAGIGILGES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-QLTFYSKLMSCGVSH 122
            +   ++++    +    +L      +           ++S                 + 
Sbjct: 60  RIRNVLRMKKAGIEGPFMLLRLPMMSELVEDVKHFDYIMVSDPDVAKKVDELSREMKRNV 119

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
                +D G  R G+  ++A++         +  +                   +   + 
Sbjct: 120 KIIYMIDVGDLREGVWFEKAVEEIAQCRGANIVGIGTNFGCYGGIIPTREKFEILLDIKE 179

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHF-----QLTRPGISLYGGTDKINKSHPMQTVVT 237
           +   +H   IE     ++  L               R G ++  G D  N          
Sbjct: 180 KLEKNHGFNIEIVSGGNTPALYALENGEIPEGINQLRIGEAIVLGRDITNNRVIDWLSQN 239

Query: 238 AEARIILIRKALAGELVSYGGQ--KKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
                  + +      V  G +      R        I       L    +DS     V 
Sbjct: 240 TFLIEAEVIEVKEKPSVPLGKRGLDVFGRKVDFVDRGIRKRAICALGEQDIDSRGLIPVD 299

Query: 296 LGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
            G +              + D  + D+TD   ++VGD 
Sbjct: 300 KGVEVLHA----------SSDHIVLDVTDFGDVKVGDV 327


>gi|226320649|ref|ZP_03796207.1| Alanine racemase [Borrelia burgdorferi 29805]
 gi|226233865|gb|EEH32588.1| Alanine racemase [Borrelia burgdorferi 29805]
          Length = 57

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 31/55 (56%)

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           M++T+ +I   L ++ G  ++I    + +D+++  S  ++Y+LL  IG    + Y
Sbjct: 1   MNLTIVEIPKDLKVKTGSKVEIVSEKLSIDEMSKFSKRSHYELLCNIGKYEKRKY 55


>gi|50843719|ref|YP_056946.1| amino acid racemase [Propionibacterium acnes KPA171202]
 gi|289424481|ref|ZP_06426264.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK187]
 gi|289427473|ref|ZP_06429186.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J165]
 gi|295131808|ref|YP_003582471.1| alanine racemase [Propionibacterium acnes SK137]
 gi|50841321|gb|AAT83988.1| amino acid racemase [Propionibacterium acnes KPA171202]
 gi|289155178|gb|EFD03860.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes SK187]
 gi|289159403|gb|EFD07594.1| alanine racemase, N-terminal domain protein [Propionibacterium
           acnes J165]
 gi|291377238|gb|ADE01093.1| alanine racemase [Propionibacterium acnes SK137]
 gi|313765110|gb|EFS36474.1| alanine racemase protein [Propionibacterium acnes HL013PA1]
 gi|313771045|gb|EFS37011.1| alanine racemase protein [Propionibacterium acnes HL074PA1]
 gi|313806767|gb|EFS45265.1| alanine racemase protein [Propionibacterium acnes HL087PA2]
 gi|313812017|gb|EFS49731.1| alanine racemase protein [Propionibacterium acnes HL083PA1]
 gi|313815642|gb|EFS53356.1| alanine racemase protein [Propionibacterium acnes HL059PA1]
 gi|313817559|gb|EFS55273.1| alanine racemase protein [Propionibacterium acnes HL046PA2]
 gi|313821614|gb|EFS59328.1| alanine racemase protein [Propionibacterium acnes HL036PA1]
 gi|313824440|gb|EFS62154.1| alanine racemase protein [Propionibacterium acnes HL036PA2]
 gi|313826787|gb|EFS64501.1| alanine racemase protein [Propionibacterium acnes HL063PA1]
 gi|313832451|gb|EFS70165.1| alanine racemase protein [Propionibacterium acnes HL007PA1]
 gi|313833426|gb|EFS71140.1| alanine racemase protein [Propionibacterium acnes HL056PA1]
 gi|314916131|gb|EFS79962.1| alanine racemase protein [Propionibacterium acnes HL005PA4]
 gi|314917393|gb|EFS81224.1| alanine racemase protein [Propionibacterium acnes HL050PA1]
 gi|314921734|gb|EFS85565.1| alanine racemase protein [Propionibacterium acnes HL050PA3]
 gi|314926090|gb|EFS89921.1| alanine racemase protein [Propionibacterium acnes HL036PA3]
 gi|314930664|gb|EFS94495.1| alanine racemase protein [Propionibacterium acnes HL067PA1]
 gi|314955412|gb|EFS99817.1| alanine racemase protein [Propionibacterium acnes HL027PA1]
 gi|314959411|gb|EFT03513.1| alanine racemase protein [Propionibacterium acnes HL002PA1]
 gi|314961737|gb|EFT05838.1| alanine racemase protein [Propionibacterium acnes HL002PA2]
 gi|314975116|gb|EFT19211.1| alanine racemase protein [Propionibacterium acnes HL053PA1]
 gi|314977526|gb|EFT21621.1| alanine racemase protein [Propionibacterium acnes HL045PA1]
 gi|314979916|gb|EFT24010.1| alanine racemase protein [Propionibacterium acnes HL072PA2]
 gi|314985127|gb|EFT29219.1| alanine racemase protein [Propionibacterium acnes HL005PA1]
 gi|314986878|gb|EFT30970.1| alanine racemase protein [Propionibacterium acnes HL005PA2]
 gi|314990741|gb|EFT34832.1| alanine racemase protein [Propionibacterium acnes HL005PA3]
 gi|315082993|gb|EFT54969.1| alanine racemase protein [Propionibacterium acnes HL027PA2]
 gi|315086526|gb|EFT58502.1| alanine racemase protein [Propionibacterium acnes HL002PA3]
 gi|315087930|gb|EFT59906.1| alanine racemase protein [Propionibacterium acnes HL072PA1]
 gi|315096843|gb|EFT68819.1| alanine racemase protein [Propionibacterium acnes HL038PA1]
 gi|315099426|gb|EFT71402.1| alanine racemase protein [Propionibacterium acnes HL059PA2]
 gi|315102402|gb|EFT74378.1| alanine racemase protein [Propionibacterium acnes HL046PA1]
 gi|315109679|gb|EFT81655.1| alanine racemase protein [Propionibacterium acnes HL030PA2]
 gi|327333045|gb|EGE74777.1| amino acid racemase [Propionibacterium acnes HL096PA2]
 gi|327334038|gb|EGE75753.1| amino acid racemase [Propionibacterium acnes HL096PA3]
 gi|327444334|gb|EGE90988.1| alanine racemase protein [Propionibacterium acnes HL013PA2]
 gi|327446807|gb|EGE93461.1| alanine racemase protein [Propionibacterium acnes HL043PA2]
 gi|327448753|gb|EGE95407.1| alanine racemase protein [Propionibacterium acnes HL043PA1]
 gi|327455094|gb|EGF01749.1| alanine racemase protein [Propionibacterium acnes HL087PA3]
 gi|327456230|gb|EGF02885.1| alanine racemase protein [Propionibacterium acnes HL083PA2]
 gi|328755929|gb|EGF69545.1| alanine racemase protein [Propionibacterium acnes HL087PA1]
 gi|328757655|gb|EGF71271.1| alanine racemase protein [Propionibacterium acnes HL020PA1]
 gi|328759000|gb|EGF72616.1| alanine racemase protein [Propionibacterium acnes HL025PA2]
 gi|328759900|gb|EGF73489.1| amino acid racemase [Propionibacterium acnes HL099PA1]
 gi|332676673|gb|AEE73489.1| putative amino acid racemase [Propionibacterium acnes 266]
          Length = 362

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + G+
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGI 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-N 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC       V N
Sbjct: 116 RAGTRHGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGGVQPSVEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  +                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGNI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|313835054|gb|EFS72768.1| alanine racemase protein [Propionibacterium acnes HL037PA2]
 gi|314929024|gb|EFS92855.1| alanine racemase protein [Propionibacterium acnes HL044PA1]
 gi|314970966|gb|EFT15064.1| alanine racemase protein [Propionibacterium acnes HL037PA3]
 gi|328905713|gb|EGG25489.1| amino acid racemase [Propionibacterium sp. P08]
          Length = 362

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 109/354 (30%), Gaps = 45/354 (12%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIA-PALYNAGVQDFFVT 63
            RL+I    + +N  ++         + AAV K     L    +   AL + G+     +
Sbjct: 6   PRLEIFADRIHDNAQTIVNQCAEHGVQVAAVTKV----LHAHPVLLRALDDTGITMLADS 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++   ++          +L                I + SS+  +T  S      G  H
Sbjct: 62  RLQNLRQIAACGTPLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSDAAVRAGTRH 121

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLER 181
              + VD G  R G+     +D   ++   +   +  + ++LAC       V N  +L +
Sbjct: 122 GVIVMVDVGDLREGVWPDHLVDVVSSAAALRGIDVKGVGTNLACYGGVQPSVENMTRLVQ 181

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHF-------------QLTRPGISLYGGTDKINK 228
            R +     G+E  L S       P                 +    G +    +     
Sbjct: 182 LRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDRSPWPQT 241

Query: 229 SHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADGYPLTLS 284
                 VV     +        G               R   + A+  +G  D  P  L+
Sbjct: 242 RQDAVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDVNPSDLT 301

Query: 285 GLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            +D  H                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 302 PVDPGHI-----------------VLGASS-DHLIVDVTDSAESVEIGTEVRFW 337


>gi|315107296|gb|EFT79272.1| alanine racemase protein [Propionibacterium acnes HL030PA1]
          Length = 362

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + G+
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGI 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-N 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC       V N
Sbjct: 116 RAGTRHGVIVMVDVGDLREGVWPDHLVDVVSSAAALPGIDVKGVGTNLACYGRVQPSVEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSEINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  +                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGNI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|313813900|gb|EFS51614.1| alanine racemase protein [Propionibacterium acnes HL025PA1]
          Length = 362

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 113/360 (31%), Gaps = 46/360 (12%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGV 57
           M+ +   RL+I    +++N  ++         + AAV K     L    +   AL + G+
Sbjct: 1   MNRST-PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGI 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + ++   ++          +L                I + SS+  +T  S+   
Sbjct: 56  TMLADSRLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAV 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-N 175
             G  H   + VD G  R G+     +D   ++       +  + ++LAC       V N
Sbjct: 116 RAGTRHGVIVMVDVGDLREGVWPDHLVDVVSSATALPGIDVKGVGTNLACYGGVQPSVEN 175

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYH-------------FQLTRPGISLYGG 222
             +L + R +     G+E  L S       P                 +    G +    
Sbjct: 176 MTRLVQLRDMARAATGLELGLISGGNSANLPLMMSGAMPSKINNLRIGEAIILGRNTLDR 235

Query: 223 TDKINKSHPMQTVVTAEARIILIRKALAGELVS---YGGQKKLTRDSLI-AVAAIGYADG 278
           +           VV     +        G               R   + A+  +G  D 
Sbjct: 236 SPWPQTRQDTVEVVAEIIELERKPSIPLGRTGEDAFGQHVTFTDRGIRLRAICNLGRQDV 295

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQIF 337
            P  L+ +D  +                  +LG  + D  + D+TDS   +E+G  ++ +
Sbjct: 296 NPSDLAPVDPGNI-----------------VLGASS-DHLIVDMTDSSESVEIGTEVRFW 337


>gi|320533685|ref|ZP_08034304.1| hypothetical protein HMPREF9057_02194 [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134080|gb|EFW26409.1| hypothetical protein HMPREF9057_02194 [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 61

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 11/49 (22%)

Query: 332 DYIQIFGPD-----------IKLDDVALASGTTNYDLLVRIGTRYAKFY 369
           D   ++G                D+ A   GT NY+++ R+G R  + Y
Sbjct: 1   DAAVLWGAPEHGGVSDPEAVPTADEWAQVCGTINYEIVTRLGARVPRCY 49


>gi|255101991|ref|ZP_05330968.1| putative amino acid racemase [Clostridium difficile QCD-63q42]
 gi|255307859|ref|ZP_05352030.1| putative amino acid racemase [Clostridium difficile ATCC 43255]
          Length = 370

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 91/334 (27%), Gaps = 24/334 (7%)

Query: 12  DLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL  L+ N   +  +    N +   ++K          IA    NAG   F   +++EG 
Sbjct: 14  DLDQLEKNIDKIQQICTNNNKQLWPMLKT----HKSTYIARLQKNAGASGFLAGTLDEGE 69

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFD-----TNLIPVISSVPQLTFYSKLMSCGVSHPY 124
            L     +  +     +       I         +    +      +        +    
Sbjct: 70  ALIKAGFEDIMLAYPYMGEVNINRIVTMASKINLICATDNIECAKAYSEAFSKSKIECKL 129

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            + VD G +R G+  ++ ++        +  ++  I SH       SS            
Sbjct: 130 LIIVDCGLHRFGVEPEKVVELATEISKLENIKIVGISSHPGQVYGCSSPE-----GVPDV 184

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
            +     +E +  + +            + P +     +  I    P   V     +I L
Sbjct: 185 CVQEDSSMEKAYKALTDNGFNIEIVASGSTPTVESEAASKTITAVRPGNYVYYDAIQIGL 244

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEHSPSVFLGGKGFIK 303
                    ++          S   +   G    G      G  S        G      
Sbjct: 245 GCATEDMCALTVVCTVISKNSSGYYLIDCGSKCLGLDKGAHGNSSIVGYGRVCGHPELTI 304

Query: 304 GYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
             +   +GKI        +     I++GD I+I 
Sbjct: 305 DSLSEEVGKI-------KVNGETDIKIGDRIRII 331


>gi|168179710|ref|ZP_02614374.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           NCTC 2916]
 gi|182669204|gb|EDT81180.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           NCTC 2916]
          Length = 353

 Score = 60.4 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 118/364 (32%), Gaps = 48/364 (13%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEKVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   S+        
Sbjct: 59  SRIENLKKL--VHINLPKMLLRLPMISQVEEVVKYTDISLVSDIITIRELSREAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        N K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYITVKEILNFKNVKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLA---SSSGILLGPNYHF----QLTRPGISL---YGGTDKINKS 229
              +  I +   I+  +    +S  I L  +          R G S+    G  D+  + 
Sbjct: 177 VNIKKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDEHIEP 236

Query: 230 H--PMQTVVTAEARIILIRKALAGE----LVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                  +V     +        G             +       A+ AIG  D  P  L
Sbjct: 237 LLKDAFKLVAEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNL 296

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI---FGP 339
             +D   S                 +LG  + D  + DIT+     ++GD I+    FG 
Sbjct: 297 IPIDDNIS-----------------VLGASS-DHLLLDITNCNKDYKIGDKIEFNVTFGG 338

Query: 340 DIKL 343
            + +
Sbjct: 339 CLSV 342


>gi|329769055|ref|ZP_08260477.1| hypothetical protein HMPREF0433_00241 [Gemella sanguinis M325]
 gi|328839546|gb|EGF89122.1| hypothetical protein HMPREF0433_00241 [Gemella sanguinis M325]
          Length = 317

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 29/303 (9%)

Query: 48  IAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP 107
           ++     AG+  F  T  EE   +R    +  + +         +++   N+   I+++ 
Sbjct: 1   MSKFFSEAGINYFATTKEEECKIIRETLGE-EVSIFLLNPTRDFELVRKYNIEVNIANL- 58

Query: 108 QLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA 167
              +  + +         L+      R G    + +    N   +    L    SH + A
Sbjct: 59  --DYLKENIDELRDLTLQLEFAGSMRRAGAKTLDEVLEIINFCKENNLNLKGFWSHFSFA 116

Query: 168 DDPSSHVNSVQ---LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRP-GISLYGGT 223
           D+        +   L+     +  +      L +S+  L    +     +  GI LYG  
Sbjct: 117 DEFDGFYEKEKELVLKVSEEALKIHDFEVVHLQNSASFLRDGAFEKTTHQRLGIILYGAL 176

Query: 224 DKINK-------SHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYA 276
               K       +  ++  +T    I+ I     GE + Y       +D  + V  IGY 
Sbjct: 177 PYDVKQYSVALPNLVIKNPITVYGEIVNIVDLKEGECIGYSNAYIAEKDKKVGVVNIGYG 236

Query: 277 DGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           DG                  G    I      I   + M   + +I++    ++GD + +
Sbjct: 237 DGILR-----------DRLRGNTCIINNKEKDIYATM-MSHLVVEISEKE--KIGDKVFL 282

Query: 337 FGP 339
           +  
Sbjct: 283 YDD 285


>gi|226307544|ref|YP_002767504.1| hypothetical protein RER_40570 [Rhodococcus erythropolis PR4]
 gi|226186661|dbj|BAH34765.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 597

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 7/204 (3%)

Query: 7   LRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             + +DL  ++ N   +   + +     A V K      G  K+A A+   GV     + 
Sbjct: 4   PTITVDLRRIEQNARVLVEASNAKGIEVAGVSKST---CGSPKVARAMVRGGVAQIADSR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           ++   ++R       + ++      +         I + S +  +       ++ GV H 
Sbjct: 61  LDNLARIRRDGITVPLMLIRAPSLNEIDDTIRYADISLNSELTTIVALGRAALTRGVIHD 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERF 182
             L +D G  R G+   EALD        +  +L  I ++LAC       V N   L   
Sbjct: 121 IVLMIDLGDLREGILPAEALDVVAEILPIEGIRLIGIGANLACVGGIQPTVDNLSNLVYI 180

Query: 183 RTLISHYKGIEASLASSSGILLGP 206
              I+    IE  + S       P
Sbjct: 181 ADEITKRFSIELPIVSGGNTFSLP 204


>gi|158320722|ref|YP_001513229.1| alanine racemase domain-containing protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140921|gb|ABW19233.1| alanine racemase domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 354

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 104/341 (30%), Gaps = 26/341 (7%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R+ I L+ LK+N   +  L        AAV K  +   G  +IA A  + G +    + 
Sbjct: 3   PRIDIHLSKLKHNTKIITDLCKEKGIEVAAVTKGFS---GISEIAQAYVDGGARYLADSR 59

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           +E   KL+  + +  +  L      Q +       I + S +  +   +      G  H 
Sbjct: 60  IENLKKLKDISIEKIMLRL--PMTSQVEETVAYADISLNSELETIVALNNAAEKLGKIHK 117

Query: 124 YALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLER 181
             + VD G  R G   + E  D        +  ++  + ++L C         N  +L  
Sbjct: 118 IIIMVDLGDLREGFFDEVELEDALLKMKKLQNIKVIGVGTNLTCYGGVIPDETNLGKLVE 177

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLT-------RPGISLYGGTDKINKSHPMQT 234
           +   I      +  + S                      R G +L  G +         T
Sbjct: 178 YGEKIEKVLDTKLEIISGGNSSSFHLLEQDRIPKKINNLRLGETLLLGREAAYGELIENT 237

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
                  +  I +              + RD+   +            +  +  + +   
Sbjct: 238 HHDVFQLVAEIIEIKDK---PSHPIGTIGRDAFWNIPVFEDKGIMKRAILAVGRQDTAGA 294

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYI 334
            +          + +LG  + D  + DIT      +VGD I
Sbjct: 295 SIE-PV---DKNIDVLGASS-DHLIIDITHCDREYKVGDEI 330


>gi|167949694|ref|ZP_02536768.1| alanine racemase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 62

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 11/68 (16%)

Query: 251 GELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL 310
              V YGG  +      +AV  +GY DGYP             V  G    ++G  +P++
Sbjct: 1   MTAVGYGGSYRCPEPMPVAVIGVGYGDGYPRH-----------VPGGTPVLLRGRRLPLV 49

Query: 311 GKITMDMT 318
           G+++MDM 
Sbjct: 50  GRVSMDMI 57


>gi|322806269|emb|CBZ03837.1| putative cytoplasmic protein [Clostridium botulinum H04402 065]
          Length = 353

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 118/364 (32%), Gaps = 48/364 (13%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEKVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   S+        
Sbjct: 59  SRIENLKKL--VHISLPKMLLRLPMISQVEEVVKYTDISLVSDIITIRELSREAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        N K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYIAVKEILNFKNVKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLA---SSSGILLGPNYHF----QLTRPGISL---YGGTDKINKS 229
              +  I +   I+  +    +S  I L  +          R G S+    G  D+  + 
Sbjct: 177 VNIKKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDEHIEP 236

Query: 230 H--PMQTVVTAEARIILIRKALAGE----LVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                  +V     +        G             +       A+ AIG  D  P  L
Sbjct: 237 LLKDAFKLVAEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNL 296

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI---FGP 339
             +D   S                 +LG  + D  + DIT+     ++GD I+    FG 
Sbjct: 297 IPIDDNIS-----------------VLGASS-DHLLLDITNCNKDYKIGDKIEFNVTFGG 338

Query: 340 DIKL 343
            + +
Sbjct: 339 CLSV 342


>gi|213620646|ref|ZP_03373429.1| alanine racemase [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
          Length = 40

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 331 GDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTRYA 366
           G  ++++G +IK+DDVA A+GT  Y LL  +  R  
Sbjct: 1   GTPVELWGKEIKVDDVASAAGTLGYGLLCAVAPRVP 36


>gi|153939293|ref|YP_001391327.1| alanine racemase domain-containing protein [Clostridium botulinum F
           str. Langeland]
 gi|170755259|ref|YP_001781566.1| alanine racemase domain-containing protein [Clostridium botulinum
           B1 str. Okra]
 gi|152935189|gb|ABS40687.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           F str. Langeland]
 gi|169120471|gb|ACA44307.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           B1 str. Okra]
 gi|295319356|gb|ADF99733.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           F str. 230613]
          Length = 353

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         + AAV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVAAVTKTF---CGNPKIAKAIAEEEVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   SK        
Sbjct: 59  SRIENLKKL--VHINLPKMLLRLPMISQVEEVVKYTDISLVSDIITIRELSKEAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        N K  +L  I ++L+C         N  QL
Sbjct: 117 HSVILMIDLGDLREGIFNEEEIYITVEEILNFKNVKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLASSSG 201
              +  I +   I+  + S   
Sbjct: 177 VNIKKNIENKFNIKIEVISGGN 198


>gi|163740750|ref|ZP_02148143.1| hypothetical amino acid racemase [Phaeobacter gallaeciensis 2.10]
 gi|161385741|gb|EDQ10117.1| hypothetical amino acid racemase [Phaeobacter gallaeciensis 2.10]
          Length = 373

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 6/163 (3%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R+KIDL  +++N   +             V K    G     +A A+ + G        
Sbjct: 4   PRIKIDLHKIRDNTRCLVERLKPLGITVTGVTKGVC-GH--PGVARAMLDGGAIGLADAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSHP 123
           +    ++R       I ++      Q   I +T        +       +  +  G+SH 
Sbjct: 61  LANVRRMRKAGLTCPILMIRTPMLSQAGQIVETCEASCNTETSVIAKLAAAALRRGISHE 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             L V+ G  R G+  ++  +   +        L  I ++ AC
Sbjct: 121 IILMVEMGDGREGIMPEDLTNAALHVTRTPGVLLKGIGANFAC 163


>gi|153933907|ref|YP_001384263.1| alanine racemase domain-containing protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|153935732|ref|YP_001387802.1| alanine racemase domain-containing protein [Clostridium botulinum A
           str. Hall]
 gi|152929951|gb|ABS35451.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A str. ATCC 19397]
 gi|152931646|gb|ABS37145.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A str. Hall]
          Length = 353

 Score = 59.7 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + ++++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPKVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEKVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   SK        
Sbjct: 59  SRIENLKKL--AHINLPKMLLRLPMISQVEEVVKYADISLVSDIITIRELSKEAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        N K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYITVKEILNFKNVKLMGIGTNLSCYGGVIPTYKNLSQL 176

Query: 180 ERFRTLISHYKGIEASLASSSG 201
              +  I +   I+  + S   
Sbjct: 177 VNIKKNIENKFNIKIEVISGGN 198


>gi|27468687|ref|NP_765324.1| hypothetical protein SE1769 [Staphylococcus epidermidis ATCC 12228]
 gi|57867700|ref|YP_189342.1| hypothetical protein SERP1778 [Staphylococcus epidermidis RP62A]
 gi|251812100|ref|ZP_04826573.1| amino acid racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875395|ref|ZP_06284268.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis SK135]
 gi|293368486|ref|ZP_06615110.1| amino acid racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27316235|gb|AAO05410.1|AE016750_15 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57638358|gb|AAW55146.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|251804434|gb|EES57091.1| amino acid racemase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296160|gb|EFA88681.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis SK135]
 gi|291317444|gb|EFE57866.1| amino acid racemase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329731271|gb|EGG67641.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis VCU144]
 gi|329736454|gb|EGG72722.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis VCU028]
 gi|329737053|gb|EGG73308.1| alanine racemase, N-terminal domain protein [Staphylococcus
           epidermidis VCU045]
          Length = 353

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 104/336 (30%), Gaps = 35/336 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              ++++L+ +K N   + +L    +     V+K  A   G ++I  ++ + G+  F  +
Sbjct: 1   MANVRVNLSKIKYNAKVLQSLLERRHIHFTPVIKCVA---GDKRIVSSIKSLGITHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            ++   +L+       +           + +     + + + +  +   + L     + H
Sbjct: 58  RLDNIEQLKDLDITFTLL--RPTVEADLEKMISRVEMSIQTELTTIKKLNTLAKSLDIKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + + +          QL  +  +  C   +  +  +   + +
Sbjct: 116 QIMLMVDWKDGREGVLTYDVVRYVQEVLRLSHIQLVGLAFNFMCFKSEAPNEKDVRMINK 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA- 240
           F   + +    +  + S     + P   +                          T  + 
Sbjct: 176 FIHNVENETHFKFRIISGGNSSMLPQTLYNHLD----KINDLRIGEALLRGIDTTTNHSI 231

Query: 241 -RIILIRKALAGELVSYGGQKKLTRDSLI--AVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +      L  E++    +     +     A+  IGY D +                 G
Sbjct: 232 NSLYQNAIVLEAEIIEIKPRLYQKNNQSYLQAIVDIGYLDTF---------------IEG 276

Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
            K         ILG  + D  M D+ +    ++GD 
Sbjct: 277 IKPLGNDIR--ILGASS-DHLMIDLNNQDHYQIGDK 309


>gi|219820855|gb|ACL37548.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820859|gb|ACL37550.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820861|gb|ACL37551.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820863|gb|ACL37552.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820867|gb|ACL37554.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820869|gb|ACL37555.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820873|gb|ACL37557.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820883|gb|ACL37562.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820885|gb|ACL37563.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820887|gb|ACL37564.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820889|gb|ACL37565.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820891|gb|ACL37566.1| alanine racemase-like protein [Listeria monocytogenes]
          Length = 153

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 6/154 (3%)

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR    Q    ++ G    ++  +   N I   S       + + ++   +    
Sbjct: 1   DEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATLRIH 57

Query: 126 LQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +F+T
Sbjct: 58  LKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAKFQT 117

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPG 216
           +++  K     +   +S+  LL P   F   R G
Sbjct: 118 ILTSLKNRPTYVHTANSAASLLQPQIGFDAIRFG 151


>gi|170761414|ref|YP_001787394.1| alanine racemase domain-containing protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169408403|gb|ACA56814.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 353

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 69/364 (18%), Positives = 119/364 (32%), Gaps = 48/364 (13%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEKVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   SK  +     
Sbjct: 59  SRIENLKKL--VHINLPKMLLRLPMISQVEEVVKYADISLVSDIITIRELSKETIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        N K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYITVEEILNFKSVKLMGIGTNLSCYGGVIPTYKNLSQL 176

Query: 180 ERFRTLISHYKGIEASLA---SSSGILLGPNYHF----QLTRPGISL---YGGTDKINKS 229
              +  I +   I+  +    +S  I L  +          R G S+    G  D+  + 
Sbjct: 177 VNIKKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDEHIEP 236

Query: 230 H--PMQTVVTAEARIILIRKALAGE----LVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                  +V     +        G             +       A+ AIG  D  P  L
Sbjct: 237 LLKDAFKLVVEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNL 296

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI---FGP 339
             +D   S                 +LG  + D  + DIT+     ++GD I+    FG 
Sbjct: 297 IPIDDNIS-----------------VLGASS-DHLLLDITNCNKDYKIGDKIEFNVTFGG 338

Query: 340 DIKL 343
            + +
Sbjct: 339 CLSV 342


>gi|219820871|gb|ACL37556.1| alanine racemase-like protein [Listeria monocytogenes]
          Length = 153

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 6/154 (3%)

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR    Q    ++ G    ++  +   N I   S       + + ++        
Sbjct: 1   DEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLEDLTLEAPLRIH 57

Query: 126 LQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L+VD+G  RLG+  ++EA        +    QL  I +H A AD   +     QL +F+T
Sbjct: 58  LKVDSGMGRLGIRTVEEARQIETTIASDNQLQLEGIYTHFATADQLETSYFEQQLAKFQT 117

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPG 216
           +++  K     +   +S+  LL P   F   R G
Sbjct: 118 ILTSLKKRPTYVHTANSAASLLQPQIGFDAIRFG 151


>gi|229489294|ref|ZP_04383158.1| arginase family protein [Rhodococcus erythropolis SK121]
 gi|229323787|gb|EEN89544.1| arginase family protein [Rhodococcus erythropolis SK121]
          Length = 597

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 70/204 (34%), Gaps = 7/204 (3%)

Query: 7   LRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             + +DL  ++ N   +   + +     A V K      G  K+A A+   GV     + 
Sbjct: 4   PTITVDLRRIEQNARVLVEASSAHGISVAGVSKST---CGSPKVARAMVRGGVTQIADSR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSHP 123
           ++   ++R       + ++      +         I + S +  +        + GV H 
Sbjct: 61  LDNLARIRRDGITVPLMLIRAPSLNEIDDTIRYADISLNSELTTIAALGRAARTRGVVHD 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQLERF 182
             L +D G  R G+   EALD        +  +L  I ++LAC       V N   L   
Sbjct: 121 IVLMIDLGDLREGILPAEALDVVAEILPIEGIRLIGIGANLACVGGIQPTVDNLSNLVYL 180

Query: 183 RTLISHYKGIEASLASSSGILLGP 206
              I+    IE  + S       P
Sbjct: 181 ADEITKRFSIELPIVSGGNTFSLP 204


>gi|219820857|gb|ACL37549.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820865|gb|ACL37553.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820875|gb|ACL37558.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820877|gb|ACL37559.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820879|gb|ACL37560.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820881|gb|ACL37561.1| alanine racemase-like protein [Listeria monocytogenes]
 gi|219820893|gb|ACL37567.1| alanine racemase-like protein [Listeria monocytogenes]
          Length = 153

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 6/154 (3%)

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E + LR    Q    ++ G    ++  +   N I   S       + + ++   +    
Sbjct: 1   DEALALREAGFQDDFILVLGATRKEDANLAAKNHI---SLTVFREDWLENLTLEATLRIH 57

Query: 126 LQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
           L+VD+G  RLG+   +EA      S N    QL  I +H A AD   +     QL +F+T
Sbjct: 58  LKVDSGMGRLGIRTTEEARRIEATSTNDHQLQLEGIYTHFATADQLETSYFEQQLAKFQT 117

Query: 185 LISHYKGIEASLA--SSSGILLGPNYHFQLTRPG 216
           +++  K     +   +S+  LL P   F   R G
Sbjct: 118 ILTSLKKRPTYVHTANSAASLLQPQIGFDAIRFG 151


>gi|168185009|ref|ZP_02619673.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Bf]
 gi|237795433|ref|YP_002862985.1| alanine racemase, N-terminal domain-containing protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182671931|gb|EDT83892.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Bf]
 gi|229263648|gb|ACQ54681.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Ba4 str. 657]
          Length = 353

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 68/364 (18%), Positives = 117/364 (32%), Gaps = 48/364 (13%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEEVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   SK        
Sbjct: 59  SRIENLKKL--VHINLPKMLLRLPMISQVEEVVKYADISLVSDIITIRELSKEAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        + K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLA---SSSGILLGPNYHF----QLTRPGISL---YGGTDKINKS 229
                 I +   I+  +    +S  I L  +          R G S+    G  D+  + 
Sbjct: 177 VNIEKNIENKFNIKIEVISGGNSGSISLFKDNKMPQEINQLRLGASISLGIGLNDEHIEP 236

Query: 230 H--PMQTVVTAEARIILIRKALAGE----LVSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
                  +V     +        G             +       A+ AIG  D  P  L
Sbjct: 237 LLKDAFKLVVEIVEVKNKPSVPIGTIGLDAFGNKPFFEDKGIMKRAICAIGRQDISPDNL 296

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI---FGP 339
             +D   S                 +LG  + D  + DIT+     ++GD I+    FG 
Sbjct: 297 IPIDDNIS-----------------VLGASS-DHLLLDITNCNKDYKIGDKIEFNVTFGG 338

Query: 340 DIKL 343
            + +
Sbjct: 339 CLSV 342


>gi|332654124|ref|ZP_08419868.1| amino acid racemase [Ruminococcaceae bacterium D16]
 gi|332517210|gb|EGJ46815.1| amino acid racemase [Ruminococcaceae bacterium D16]
          Length = 364

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 6/144 (4%)

Query: 3   SNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           S ++  ++IDL  LK N  ++     + +   + VVK           A      GV   
Sbjct: 5   SYQYPHVEIDLGKLKENLAALQERCQASSIEISGVVKGF---HALPAAAKVYEEVGVSSI 61

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + +++   L+    +  + ++    P + + +   + I + S    L        + G
Sbjct: 62  ASSRMDQLRGLKEAGIRTPLMLIRIPMPSEVEDVVTWSDISLNSERSVLRLLDEAARNQG 121

Query: 120 VSHPYALQVDTGFNRLGLSLQEAL 143
            +H   L VD G  R G    + L
Sbjct: 122 KTHKVILMVDLGDLREGFWDWDEL 145


>gi|226949300|ref|YP_002804391.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A2 str. Kyoto]
 gi|226842782|gb|ACO85448.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 353

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA A+    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKILVEECKKRGIKVVAVTKTF---CGNPKIAKAIAEEEVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q + +     I ++S +  +   SK        
Sbjct: 59  SRIENLKKL--VHINLPKMLLRLPMVSQVEEVVKYADISLVSDIITIRELSKEAIKQNKI 116

Query: 122 HPYALQVDTGFNRLGLSLQEALDF-THNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G+  +E +        + K  +L  I ++L+C         N  QL
Sbjct: 117 HSIILMIDLGDLREGIFNEEEIYITVKEILDFKSIKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLASSSG 201
                 I +   I+  + S   
Sbjct: 177 VNIEKNIENKFNIKIEVISGGN 198


>gi|314935883|ref|ZP_07843235.1| putative amino acid racemase [Staphylococcus hominis subsp. hominis
           C80]
 gi|313656448|gb|EFS20188.1| putative amino acid racemase [Staphylococcus hominis subsp. hominis
           C80]
          Length = 353

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 115/333 (34%), Gaps = 32/333 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             R+ I+L+ ++ N H +  L  S N     V+K  A   G E I   L   G   F  +
Sbjct: 1   MSRIVINLSKIEYNGHVLKMLFDSKNIAIIPVIKSIA---GDEHIIKRLMKVGFNYFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +E   +   +T   +  +L      Q + +   + + + + +  +   + + +   +  
Sbjct: 58  RLENIPQ--QFTKDCQFLLLRSPLKRQYEDLIKESYVSIQTEMVTIRQLNHIATEMSNQH 115

Query: 124 YAL-QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSV-QLER 181
             +  VD    R G+     +++ +        +L  +  +  C    +  +N + ++ +
Sbjct: 116 QVILMVDWKDQREGVLPYHIVEYINEIKRMNNIKLLGLAFNFMCFKSKAPTLNDIDEINQ 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNY-HFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           F   + +  G+   + S     + P    + L        G T                 
Sbjct: 176 FVHHVQYETGVSFEVISGGNSSMLPLLKQYDLGCINELRIGETLFRGVDTTTNE---NIP 232

Query: 241 RIILIRKALAGELVSYGGQK-KLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
            +      L  E++    +  K     L A+  +GY D               +V    K
Sbjct: 233 ELFQNAILLEAEIIEIKPRYTKTKESYLQAIVDVGYID---------------TVIEKIK 277

Query: 300 GFIKGYMVPILGKITMDMTMFDITDSLSIEVGD 332
                + + I+G  + D  M D+ + ++ +VGD
Sbjct: 278 PL--NHRIEIMGASS-DHLMIDLKEEINYKVGD 307


>gi|187779380|ref|ZP_02995853.1| hypothetical protein CLOSPO_02976 [Clostridium sporogenes ATCC
           15579]
 gi|187773005|gb|EDU36807.1| hypothetical protein CLOSPO_02976 [Clostridium sporogenes ATCC
           15579]
          Length = 353

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 67/202 (33%), Gaps = 10/202 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + R+++D   ++ N   +         +  AV K      G  KIA  +    V     
Sbjct: 2   SYPRVEVDTKKIRYNTKVLVEECKKRGIKVTAVTKTF---CGNPKIAKVIAEEKVDILAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   KL          +L      Q K +     I ++S +  +   SK        
Sbjct: 59  SRIENLKKL--THINLPKMLLRLPMISQVKEVIKYADISLVSDIITIRELSKEAIEQNKI 116

Query: 122 HPYALQVDTGFNRLG-LSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV-NSVQL 179
           H   L +D G  R G  + +E         N K  +L  I ++L+C         N  QL
Sbjct: 117 HNIILMIDLGDLREGIFNEEEIYTTVEEILNLKGIKLMGIGTNLSCYGGVIPTYENLSQL 176

Query: 180 ERFRTLISHYKGIEASLASSSG 201
              +  I     I+  + S   
Sbjct: 177 VNIKKNIESKFNIKIEVISGGN 198


>gi|163736631|ref|ZP_02144050.1| hypothetical amino acid racemase [Phaeobacter gallaeciensis BS107]
 gi|161390501|gb|EDQ14851.1| hypothetical amino acid racemase [Phaeobacter gallaeciensis BS107]
          Length = 373

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 6/163 (3%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            R+KIDL  +++N   +             V K    G     +A A+ + G        
Sbjct: 4   PRIKIDLHKIRDNTRCLVERLKPLGITVTGVTKGVC-GH--PGVARAMLDGGAIGLADAR 60

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-IPVISSVPQLTFYSKLMSCGVSHP 123
           +    ++R       I ++      Q   I +T        +       +  +  G+SH 
Sbjct: 61  LANVRRMRKAGLTCPILMIRTPMLSQAGQIVETCEASCNTETSVIAKLAAAALRRGISHE 120

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             L V+ G  R G+  ++  +   +        L  I ++  C
Sbjct: 121 IILMVEMGDGREGIMPEDLTNAALHVTRTPGVLLKGIGANFGC 163


>gi|312880008|ref|ZP_07739808.1| alanine racemase domain protein [Aminomonas paucivorans DSM 12260]
 gi|310783299|gb|EFQ23697.1| alanine racemase domain protein [Aminomonas paucivorans DSM 12260]
          Length = 354

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/363 (15%), Positives = 108/363 (29%), Gaps = 30/363 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGL-GCEKIAPALYNAGVQDFFV 62
              L +    + +N   +    G        V K    GL G  ++       G      
Sbjct: 3   LPELMVHGDRILHNVREVVRRCGAAGVDLWGVTK----GLCGNPQVGRLFLEGGCTALAD 58

Query: 63  TSVEEGVKLRLYTPQAR-IFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           + V     LR    +A    +   +    E+++   +   V              S G +
Sbjct: 59  SRVRNLRGLREAGIRAPLYLIRIPMEQELEELVEVADGALVSMGETLEALEELCRSRGRT 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLE 180
               + VD G  R G+  +E           +   +  + ++L C     ++  N  +L 
Sbjct: 119 FRAVVMVDVGDLREGVLPEELESLGRRCAALRHVVVEGLGTNLGCFGGILATPENLTELL 178

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
           +         G+EA L S    L        L   G    G     +       ++  ++
Sbjct: 179 QGAERFREASGLEAPLVSGGATLSLK-----LLEEGTLPRGIN---HLRVGEALLLGTDS 230

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLI---AVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
             +     L  E +    Q    R           +      P      +   +      
Sbjct: 231 TGMRTIPYLNQETMEIRAQVVELRRKPSVPRGTVGVDAFGAVPSFEDRGNRRRAILALGK 290

Query: 298 GKGFIKGYM-----VPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGT 352
               ++G       V ILG  + D  + D+ +  ++++GD +  F P+     +A A  T
Sbjct: 291 QDVRLEGLTPLESGVEILGGSS-DHLVCDVEEVPALQLGD-VLSFRPNYGA-MLAAA--T 345

Query: 353 TNY 355
           + Y
Sbjct: 346 SPY 348


>gi|239929460|ref|ZP_04686413.1| alanine racemase [Streptomyces ghanaensis ATCC 14672]
          Length = 37

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 340 DIKLDDVALASGTTNYDLLVRIGTRYAKF 368
           +   +D A A+GT  Y+++ RIG R  + 
Sbjct: 3   EPTAEDWAQAAGTIAYEIVTRIGGRVPRV 31


>gi|19703887|ref|NP_603449.1| Serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714049|gb|AAL94748.1| Serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 369

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 95/364 (26%), Gaps = 60/364 (16%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   E     + +++ ALKNN      L          ++K         +I       G
Sbjct: 1   MKKKELKTPTILLNIEALKNNIKKYQKLCTEYKKELWPMIKT----HKSMEIVEMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         +  ++          K I +       +I + S    +  
Sbjct: 57  ATGVLCGTLDEVEACCQIGIKKIMYAYPVASEENIKRIIEISKKTEFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLG-------LSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +  V   Y + VD+G +R G          +E     +            + S  
Sbjct: 117 NKMAETENVIINYNIIVDSGLHRFGVSLKNLLTFAEELKKLKYLKLKGISSHPGHVYSST 176

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL----TRPGISLY 220
             AD     +N  +  R    I   +G      +S            L      PG  ++
Sbjct: 177 CEADIQQYVLNECETLRKAKEILEKEGYYLEYITSGSTPTFEEAVKDLNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD- 277
             +    INK+      +T    II                      +       G    
Sbjct: 237 LDSIQLSINKAKIKDCALTVLTTIISH---------PSENLFICDAGAKCLGLDQGAHGN 287

Query: 278 ----GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
               GY   +   +   S      GK  I+G                      ++++GD 
Sbjct: 288 NSIVGYGTVIDHPEVIVSSLSEEVGKLKIEGQT--------------------NLKIGDK 327

Query: 334 IQIF 337
           I+I 
Sbjct: 328 IEII 331


>gi|283770470|ref|ZP_06343362.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus H19]
 gi|283460617|gb|EFC07707.1| alanine racemase 2 [Staphylococcus aureus subsp. aureus H19]
          Length = 219

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 80/204 (39%), Gaps = 25/204 (12%)

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS----HYKGIEASLASSSGILLGPN 207
                +S + +H   AD+      +V+  ++  ++          +   A +S       
Sbjct: 1   MTKMIISGLWTHFGYADEFDVSDYNVERLQWMEIVEALLSEGYQFDLIHAQNSASFYREG 60

Query: 208 ----YHFQLTRPGISLYGGTDKINKS-HPMQTVVTAEARIILIRKALAGELVSYGGQKKL 262
                H    R GI+LYG     + + H +   +T +A +I +R+   G+   Y    ++
Sbjct: 61  QILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKAHVIQVREVQVGDYCGYSFAFEV 120

Query: 263 TRDS-LIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFD 321
           T+++  +AV  IGY DG   T                +  I G   PI   + M     +
Sbjct: 121 TKNNTKLAVVDIGYGDGILRT------------RAKHEALINGKRYPIR-ALMMSHMFVE 167

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDD 345
           +  ++  +  D + ++  DI++D+
Sbjct: 168 VDGNVHAQ--DEVILYNNDIRIDE 189


>gi|302390371|ref|YP_003826192.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200999|gb|ADL08569.1| alanine racemase domain protein [Thermosediminibacter oceani DSM
           16646]
          Length = 372

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 11/149 (7%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +DL  L+ N      +      R   +VK         +IA     AG + F V ++ E 
Sbjct: 13  VDLDVLEQNIKETADIVKTYGKRLWPMVKT----HKSTEIAAMQKAAGAEGFLVGTLLEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +L        +           K +         ++ +          S L   GV   
Sbjct: 69  ERLVEKGFNDIMLAYPVAGRQNLKRVIRLAQKARIILSIDCVEVAREINSALEENGVELE 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNK 152
           Y + +D+G  R G+  ++A          
Sbjct: 129 YLIIIDSGLRRFGVLPEDAAGLARELAAL 157


>gi|255654463|ref|ZP_05399872.1| putative amino acid racemase [Clostridium difficile QCD-23m63]
 gi|296449186|ref|ZP_06890973.1| amino acid racemase [Clostridium difficile NAP08]
 gi|296880837|ref|ZP_06904785.1| amino acid racemase [Clostridium difficile NAP07]
 gi|296262005|gb|EFH08813.1| amino acid racemase [Clostridium difficile NAP08]
 gi|296428124|gb|EFH14023.1| amino acid racemase [Clostridium difficile NAP07]
          Length = 354

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/347 (11%), Positives = 103/347 (29%), Gaps = 30/347 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGC-EKIAPALYNAGVQDFFV 62
           + RL+ID+  LK+N   ++ +    N + + V K         +++  A+ + G+     
Sbjct: 2   YPRLEIDIEKLKHNAKLISQMCHERNIKISFVTKSFC----AQKEVVKAICSEGIDHIAD 57

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + ++    L+         ++      + + + +   I   S +  +   ++   S  + 
Sbjct: 58  SRIQNLKNLQD--INLPKILIRIPMLSELEEVINYCDISFNSELGTIKKLNELCESKNII 115

Query: 122 HPYALQVDTGFNRLGLSLQEALDF--------THNSFNKKLGQLSLIISHLACADDPSSH 173
           H   L  D G  R G   +E   +         +         L+   + +   ++    
Sbjct: 116 HKIVLMFDLGDLREGYFYEEDFFYNVREIIKLKNIKIIGIATNLTCYGAIIPSRENIGRL 175

Query: 174 VNSVQLE--RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            +  Q    +F   +    G  +S          P     L      L G      ++  
Sbjct: 176 ASIAQKMEGKFGINLEIVSGGNSSSIHLMTNDNMPEGITNLRIGESILLGRETAYGENIN 235

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
                  +    ++       +          R+  +              +   D    
Sbjct: 236 GTYQDAFKLICQVVECKEKPSVPIGEIGFDAFRNKPVYEDKGILKRAII-AIGKQDINID 294

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITD-SLSIEVGDYIQIF 337
             + +            ILG  + D  + D+++     ++GD ++  
Sbjct: 295 SLIPIDTDI-------KILGASS-DHMILDVSNTKYDYKLGDSVEFL 333


>gi|256026803|ref|ZP_05440637.1| Serine racemase [Fusobacterium sp. D11]
 gi|289764799|ref|ZP_06524177.1| serine racemase [Fusobacterium sp. D11]
 gi|289716354|gb|EFD80366.1| serine racemase [Fusobacterium sp. D11]
          Length = 369

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/364 (13%), Positives = 98/364 (26%), Gaps = 60/364 (16%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   +     + +++ ALKNN      L          ++K         +I       G
Sbjct: 1   MQKKDLKTPTILLNIEALKNNIKKYQNLCTEYKKELWPMIKT----HKSMEIVEMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         +  ++          K I +       +I + S    +  
Sbjct: 57  ATGVLCGTLDEAEACCQKGVKKIMYAYPVASEENIKRIIEMSKKTEFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLG-------LSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +  +   Y + VD+G +R G          +E     +            + S  
Sbjct: 117 NKIAETENIIINYTIIVDSGLHRFGVSLKNLLTFAEELKKLKYLKLRGISSHPGHVYSST 176

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLG----PNYHFQLTRPGISLY 220
             AD     ++  +  R    +   +G      +S           + +  +  PG  ++
Sbjct: 177 CEADIHQYVLDECETLRKAKELLEKEGYYLKYITSGSTPTFEEAVKDSNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD- 277
             +    INK+      +T  A II                      +       G    
Sbjct: 237 LDSIQLSINKAKIKDCALTVLATIISH---------PSENLFICDAGAKCLGLDQGVHGN 287

Query: 278 ----GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
               GY   ++  +          GK  I+G                      ++++GD 
Sbjct: 288 SSIIGYGTVINHPEIIVFSLSEEVGKLKIEGQT--------------------NLKIGDK 327

Query: 334 IQIF 337
           I+I 
Sbjct: 328 IEII 331


>gi|237739119|ref|ZP_04569600.1| serine racemase [Fusobacterium sp. 2_1_31]
 gi|229423719|gb|EEO38766.1| serine racemase [Fusobacterium sp. 2_1_31]
          Length = 369

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 96/359 (26%), Gaps = 50/359 (13%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   E     + +++ ALKNN  +   L          ++K         +I       G
Sbjct: 1   MKKKELKTPTILLNIEALKNNIKNYQKLCTEYKKELWPMIKT----HKSMEIVGMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         Q  ++          K I +       +I + S    +  
Sbjct: 57  ATGVLCGTLDEAEACCEKGIQKIMYAYPVASEENIKRIIEITKKTDFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLG-------LSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +  V   Y + VD+G +R G          +E     +            + S  
Sbjct: 117 NKIAEAENVIISYTIIVDSGLHRFGLSLKNLLTFAEELKKLKNLKLRGISSHPGHVYSST 176

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL----TRPGISLY 220
             AD     ++  +  +    I   +G      +S            L      PG  ++
Sbjct: 177 CEADIHKYVLDECETLKEAKEILEKEGYYLEYITSGSTPTFTEAVKDLNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
             +    INK+      +T  A II                      +       G    
Sbjct: 237 LDSIQLSINKAKVKDCALTVLATIISH---------PSENLFICDAGAKCLGLDQGAH-- 285

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
                         +V    +  +   +   +GK         +    S++VGD I+I 
Sbjct: 286 -----GNSSIIGYGTVIDHPEVIV-SSLSEEVGK-------LKVEGETSLKVGDKIEII 331


>gi|237741584|ref|ZP_04572065.1| serine racemase [Fusobacterium sp. 4_1_13]
 gi|229429232|gb|EEO39444.1| serine racemase [Fusobacterium sp. 4_1_13]
          Length = 369

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 54/364 (14%), Positives = 104/364 (28%), Gaps = 60/364 (16%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   +     + +++ ALKNN      L          ++K         +I       G
Sbjct: 1   MQKKDLKTPTILLNIEALKNNIKKYQNLCTEYKKELWPMIKT----HKSMEIVEMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         +  ++            I +       +I + S    +  
Sbjct: 57  ATGVLCGTLDEAEACCQKGVKKIMYAYPVASEENINRIIEMSKKTEFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
                +  +   Y + VD+G +R G+SL+  L F       K  +L  I SH       +
Sbjct: 117 NKIAETENIIINYTIIVDSGLHRFGVSLKNLLAFAEKLKKLKYLKLRGISSHPGHVYSST 176

Query: 172 SHVNSVQ--------LERFRTLISHYKGIEASLASSSGILLG---PNYHFQLTRPGISLY 220
              +  Q        L + + L+         + S S         + +  +  PG  ++
Sbjct: 177 CEADIHQYVLDECETLRKAKELLEKEGYYLKYITSGSTPTFEEAVKDSNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD- 277
             +    INK+      +T  A II                      +       G    
Sbjct: 237 LDSIQLSINKAKIKDCALTVLATIISH---------PSENLFICDAGAKCLGLDQGAHGN 287

Query: 278 ----GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
               GY   ++  +          GK  I+G                      ++++GD 
Sbjct: 288 SSIIGYGTVINHPEIIVFSLSEEVGKLKIEGQT--------------------NLKIGDK 327

Query: 334 IQIF 337
           I+I 
Sbjct: 328 IEII 331


>gi|84386391|ref|ZP_00989419.1| Predicted amino acid racemase [Vibrio splendidus 12B01]
 gi|84378815|gb|EAP95670.1| Predicted amino acid racemase [Vibrio splendidus 12B01]
          Length = 378

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 6/165 (3%)

Query: 5   EFLRLKIDLTALKNNWHS-MNALS-GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + RL ID   + +N    ++ LS  N     V K     LG   IA  L +AG      
Sbjct: 2   NYPRLDIDCGKVHHNAQFLISQLSLKNISVTPVTKAF---LGHPIIAQVLIDAGATMLAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVS 121
           + +E   K+          ++      Q   +   + + + S V  +   S         
Sbjct: 59  SRIENLQKMTESGIAIPKMLIRTPMLSQVASVIKYSDMSLNSEVEVIQRLSHAAEQQNCC 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
           H   + V+ G  R G+     +DF     +     +  I ++LAC
Sbjct: 119 HGIIIMVELGDLREGVMPNRVIDFIREIISLPNITIKGIGTNLAC 163


>gi|119718891|ref|YP_925856.1| alanine racemase domain-containing protein [Nocardioides sp. JS614]
 gi|119539552|gb|ABL84169.1| alanine racemase domain protein [Nocardioides sp. JS614]
          Length = 351

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 105/367 (28%), Gaps = 56/367 (15%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L L +D    + +  ++   +       V K N YG    ++A      GV    V + +
Sbjct: 3   LTLSVDGERWRAHLRTVADATPG--LVPVAKGNGYGFTLGRLARKAQWLGVDVLAVGTYD 60

Query: 67  E--GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           E   V  R       +       P  E        +  + +V +      L++       
Sbjct: 61  ELPEVASRYAGDLLVLTPWRPFGPAVELDAALAARV--VHTVSRPGDLGDLLARQPDARV 118

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
            L+  T   R G++ +E         +    ++  +  HL  A    +H++ VQ      
Sbjct: 119 VLERATSMLRHGMTARELWSTPRILADHPKARVRGVALHLPLA--HGAHLSEVQR----- 171

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP--MQTVVTAEARI 242
           L++     E  L +     L  +      R     +    ++        +  +   A +
Sbjct: 172 LMNDVVATELPLDTVWVSHLSAD-DLAALRASYPDFTFRPRVGTDLWLGDRGALRVTATV 230

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----------------------- 279
           + +     G+   Y  +    +   I V + G A G                        
Sbjct: 231 LDVHPVERGDAFGYRHR-TAPKAGHILVVSGGTAHGIGLEAPTGDAGLRARAATLARGGL 289

Query: 280 --------PLTLSGLDSEHSPSVFLGGKGFI--KGYMVPILGKITMDMTMFDITDSLSIE 329
                   P ++ G     +    +         G  VP +G    D    D+    +  
Sbjct: 290 DAAGFVRSPFSIDGKLRLFAEPPHMQASMLFLPHGARVPSVG----DQ--VDVRVRYTAT 343

Query: 330 VGDYIQI 336
             D + +
Sbjct: 344 AFDRVVV 350


>gi|149923112|ref|ZP_01911527.1| amino acid aldolase or racemase-like protein [Plesiocystis pacifica
           SIR-1]
 gi|149816020|gb|EDM75534.1| amino acid aldolase or racemase-like protein [Plesiocystis pacifica
           SIR-1]
          Length = 408

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 73/258 (28%), Gaps = 34/258 (13%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA---------AVVKDNAYGLGCEKIAPALYNAGVQD 59
           L IDL A+++N  +M   +G+ +           AVV              AL  AG++ 
Sbjct: 33  LVIDLDAVEHNIAAMVQRAGSPQRWRPHLKTTKQAVV------------ISALIRAGLRH 80

Query: 60  FFVTSVEE-GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
             V +++E  + LR    +     +   +P Q         +       Q+   +   + 
Sbjct: 81  LKVATLDELELVLRTGAAEDVALDVLVAYPLQRAACRGALALAARWPEAQIHVLADSPAH 140

Query: 119 GVSHPYA---------LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD 169
             +             L VD G  R G +               L  L     H      
Sbjct: 141 LEALAAWSGSDPLSVLLDVDLGMGRTGSAPDRWRALEATPEGLSLAGLHGYDGHHRWTHR 200

Query: 170 PSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
            ++H    QL            +       +  LL    H          +  + +    
Sbjct: 201 EAAHAGYGQLCALAQAFLERPALRI---QGAFELLTSGTHSYAHALAYPGFAESKEAPSP 257

Query: 230 HPMQTVVTAEARIILIRK 247
           +P    V+    +   R+
Sbjct: 258 NPWLHRVSPGTIVFNDRR 275


>gi|157363014|ref|YP_001469781.1| ornithine decarboxylase [Thermotoga lettingae TMO]
 gi|157313618|gb|ABV32717.1| Ornithine decarboxylase [Thermotoga lettingae TMO]
          Length = 376

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          L IDL  ++ N+  + A   + +    +K N+      +I   L + G  +F V S+ E 
Sbjct: 19 LIIDLDIIEENYRKLAAAIPDCKIFYAIKANS--H--PRILERLRDLG-SNFDVASIGEI 73

Query: 69 VKLRLYTPQARIFVL 83
           KL      A   + 
Sbjct: 74 KKLMNLGVTADRMIF 88


>gi|257453160|ref|ZP_05618459.1| Serine racemase [Fusobacterium sp. 3_1_5R]
 gi|317059695|ref|ZP_07924180.1| serine racemase [Fusobacterium sp. 3_1_5R]
 gi|313685371|gb|EFS22206.1| serine racemase [Fusobacterium sp. 3_1_5R]
          Length = 369

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 98/349 (28%), Gaps = 30/349 (8%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   +     + +++  LK+N H    L          ++K        + I       G
Sbjct: 1   MRKEDLKTPTILLNIGVLKDNIHRYQKLCNQYGKELWPMIKT----HKSKGILEIQIEEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD-----TNLIPVISSVPQLTF 111
                  ++EE    +    +  ++          + + +       +I + +       
Sbjct: 57  ASGALCGTLEEAEMCQKMGVKKIMYAYPVSTKENIQRVIELASKSYFIIRLDNEEGAKKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
               +   V   Y + VD+G +R G+S+   L F       +  +   I      +  P 
Sbjct: 117 NEMAIKEDVIINYTIIVDSGLHRFGVSVDNILGFAEKLKQFQNLKFVGI------SSHPG 170

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGP-NYHFQLTRPGISLYGGTDKINKSH 230
              +S   +     +           S          Y    + P         +IN  H
Sbjct: 171 HVYSSTCSKDIEKYVEDECDTLHKAKSILEEAGYSIKYVTTGSTPTFDEAVKHPEINVYH 230

Query: 231 PMQTVV--TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDS 288
           P   V   + +  I   +K      V          D  I  A      G      G +S
Sbjct: 231 PGNYVFLDSIQLSIGKAKKENCALTVYSSIISHPQEDLFICDAGAK-CLGLDQGAHGNNS 289

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
                  +     +   +   +GKI        +T    ++VGD I+I 
Sbjct: 290 IIGYGTIIDHPELVIVSLSEEVGKI-------KVTGQTDLKVGDKIEII 331


>gi|289522792|ref|ZP_06439646.1| amidohydrolase family protein [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504628|gb|EFD25792.1| amidohydrolase family protein [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 86

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 315 MDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASG 351
           MD  M DITD  + ++GD +   G      I  +++AL   
Sbjct: 1   MDQFMIDITDINNPKIGDEVVFLGRQGKELIAAEEIALLLN 41


>gi|305666203|ref|YP_003862490.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Maribacter
           sp. HTCC2170]
 gi|88708194|gb|EAR00431.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Maribacter
           sp. HTCC2170]
          Length = 370

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 23/156 (14%)

Query: 1   MHSNEFLRLK-----------IDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKI 48
           M + ++ RLK           +    ++ N   M  ++G        +K         +I
Sbjct: 1   MQTMDWYRLKDTAEVISPSLMVYPDRIEKNIQLMVKMAGGTEFLRPHIKT----HKMAEI 56

Query: 49  APALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG-------IHPGQEKIIFDTNLIP 101
                  G++ F   ++ E   L     +  +  +              +K         
Sbjct: 57  VNMQMQHGIRKFKCATIAEAELLAQCGAEDILLAMQPVGANMTRYFELMDKYSSSDFSTL 116

Query: 102 VISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGL 137
           V +      F       G+     L ++ G +R G+
Sbjct: 117 VDNQKTANEFIEHSKKRGMKTSLWLDINNGMDRTGI 152


>gi|332978060|gb|EGK14798.1| hypothetical protein HMPREF9374_0084 [Desmospora sp. 8437]
          Length = 391

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 91/275 (33%), Gaps = 15/275 (5%)

Query: 16  LKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYT 75
            ++    M  L        V+K N YG G E +A A   +G ++  V +VEE  +L    
Sbjct: 13  FRH-MEHMEELYPGC--VPVIKGNGYGFGNEVLADAARKSGKREIAVGTVEEARQLEATH 69

Query: 76  PQARIFVLYGIHPG--QEKIIFDTNLIPVISSVPQLTFYSKL--------MSCGVSHPYA 125
              ++ VL  +     +  ++ +           Q    +          M         
Sbjct: 70  RFDQMIVLTPVMSELMEADLVSERVYTVGSRDHLQFLVTAVDGLLSRGTGMEEPFRLKLL 129

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           L+  +   R G SL++A          +  ++ + I  L+         +  + +     
Sbjct: 130 LKCQSPMKRYGFSLEDAGLLPEWIQRAETDRVKIEIKGLSIHFPKERTTSQAKEKCIGDW 189

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLT-RPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
           +   K +           L    + QLT +     +      +     ++ V  ++ ++ 
Sbjct: 190 LETMKRVGLPSGRMYVSHLSSEQYHQLTEKWPEVRFAMRLGTDLWLADKSFVETKSTVLD 249

Query: 245 IRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
           ++    GE   Y   ++  R+  +   A G A+G 
Sbjct: 250 VQPIRRGERFGYKQ-QRACRNGHLVFLAGGTANGV 283


>gi|325526094|gb|EGD03755.1| alanine racemase [Burkholderia sp. TJI49]
          Length = 133

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 8/134 (5%)

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +++G NRLG            + +        ++ H A ADD        QL+ F    +
Sbjct: 4   MNSGMNRLGYRPDAFRAAWERAASAPSIGRITLMMHFANADDGE---VDWQLDTFDAATA 60

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH----PMQTVVTAEARII 243
              G E S+++S+ +L  P  H    RPG  LYG +      H    P+   +T  ++II
Sbjct: 61  GIPG-ERSVSNSAAVLWHPRAHRDWVRPGTILYGASPTGAARHIADTPLMPAMTLTSKII 119

Query: 244 LIRKALAGELVSYG 257
            ++     E V YG
Sbjct: 120 GVQTLAPEETVGYG 133


>gi|145485664|ref|XP_001428840.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395928|emb|CAK61442.1| unnamed protein product [Paramecium tetraurelia]
          Length = 138

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 9  LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L++D     +N   +   +G+  +  AV+K +AYG G E +      + V+  
Sbjct: 13 LEMDSEVYIHNIKELRVSTGDKVKICAVMKADAYGHGIEVMMDTFVKSIVEYI 65


>gi|154248961|ref|YP_001409786.1| alanine racemase domain-containing protein [Fervidobacterium
           nodosum Rt17-B1]
 gi|154152897|gb|ABS60129.1| alanine racemase domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 358

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 48/153 (31%), Gaps = 12/153 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           F R+ I++ ++  N   +  +  S +     V K    N       +IA  +   GV   
Sbjct: 5   FPRVVINIDSIAYNTQKIAEICHSNDIELVGVTKLALAN------PEIARVMRKNGVDKL 58

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS-VPQLTFYSKLMSCG 119
             + ++  +KL          +L      +  +        ++S           +    
Sbjct: 59  GDSRLKNIIKLYENNVPGPYQLLRIPMISELPLAVKYADEILVSMPETAYEIDKIVGELQ 118

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNK 152
            +      +D G  R G+  + A+   +    +
Sbjct: 119 KNVQIIYMIDVGDLREGVWYEHAISEIYEVSKQ 151


>gi|239617968|ref|YP_002941290.1| alanine racemase domain protein [Kosmotoga olearia TBF 19.5.1]
 gi|239506799|gb|ACR80286.1| alanine racemase domain protein [Kosmotoga olearia TBF 19.5.1]
          Length = 355

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 6/161 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++I    +K N   +  L          V K      G EKIA A+  AGV+    + +E
Sbjct: 4   VEIYPNRVKMNTSYLRNLCAGYGVEVVGVTKVT---CGDEKIASAIVEAGVKTIGESRIE 60

Query: 67  EGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
             +++R      A   +L      +     D   + +IS +  L  + +  +    H   
Sbjct: 61  NIIRIRNSGMDNANFMLLRPPQRSRVSAALDVADVFLISDLDMLGCFMEAPNLRKYHRMI 120

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             +DTG  R G+  +EA+     +       L+ I ++L C
Sbjct: 121 YMIDTGDLREGVWYKEAIPELEEAVKIAGRYLAGIGTNLGC 161


>gi|134097855|ref|YP_001103516.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL
          2338]
 gi|291005509|ref|ZP_06563482.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL
          2338]
 gi|133910478|emb|CAM00591.1| Orn/DAP/Arg decarboxylase 2 [Saccharopolyspora erythraea NRRL
          2338]
          Length = 402

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL A++ N+ ++ +   +AR    VK N       ++   L   G   F V S  E
Sbjct: 40 LVVDLAAVRRNYQALRSALPDARICYAVKANP----APEVVATLAALG-SSFDVASPGE 93


>gi|138895645|ref|YP_001126098.1| hypothetical protein GTNG_2001 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249582|ref|ZP_03148279.1| alanine racemase domain protein [Geobacillus sp. G11MC16]
 gi|134267158|gb|ABO67353.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210876|gb|EDY05638.1| alanine racemase domain protein [Geobacillus sp. G11MC16]
          Length = 370

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/342 (14%), Positives = 108/342 (31%), Gaps = 26/342 (7%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSG-NARTAAVVK---DNAYGLGCEKIAPALYNAGVQD 59
           + + R+  D   L +N   +NA+   +     V K    N       +I  +LY  G + 
Sbjct: 2   DRYPRVTWDEKKLIHNARVLNAICKHHVEWIPVTKSVGAN------IEIVDSLYKQGYRK 55

Query: 60  FFVTSVEEGVKLRLY--TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           F  + ++    ++ Y  +    +  + GIH  ++ I +    +     V +       +S
Sbjct: 56  FADSRLQNLKAIKEYDSSINTCLLRIPGIHEIKDVITWADCSLVSEYKVIEALNQE-ALS 114

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS- 176
            G  H   L ++ G  R G+  +E +D   +           I ++L C        +  
Sbjct: 115 QGKIHHIILMIELGDLREGIMPEELMDIGKHILKFPAIHWLGIGTNLTCFGGVLPTSDKL 174

Query: 177 VQLERFRTLISHYKGIEASLASSS-----GILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
            QL + +  +    G   S+ S        +L+      ++    +       +      
Sbjct: 175 AQLVQLKESVEKKLGYHLSVISGGNSSSLHLLMSGEMPREINHLRLGESLFFGRETAFSK 234

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               +  +  ++        +  SY     +   +           G          E  
Sbjct: 235 QIPGMHHDIFLLEAEVIEIKDKPSYPQGIIVK--NAFGETPHFTDKGIRRRAILALGEQD 292

Query: 292 PSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGD 332
             +         G    I+G  + D  + D+T+    I+VG 
Sbjct: 293 VPLSELTPVK-NGI--EIIGGSS-DHAILDVTEHHDQIQVGS 330


>gi|150390137|ref|YP_001320186.1| alanine racemase domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149949999|gb|ABR48527.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 364

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 9/150 (6%)

Query: 1   MHSNEF-LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGV 57
           M S++   ++ IDL  L++N   M           A V K      G  +IA A+ + G+
Sbjct: 1   MESDKMNPKVTIDLAKLRHNARVMTEKCNEYGIAIAGVTKVFG---GRPEIAQAMIDGGI 57

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
           Q    + VE   K++         +L      +   +     I + S V  +   S+   
Sbjct: 58  QYLADSRVENLKKMKDL--SLPKILLRLPMISRVDDVVKYCDISLNSEVETIIALSQAAE 115

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
               +H   L VD G  R G+   +AL   
Sbjct: 116 KQHKTHKIILMVDLGDLREGIFDSQALKLA 145


>gi|311743393|ref|ZP_07717200.1| amino acid racemase [Aeromicrobium marinum DSM 15272]
 gi|311313461|gb|EFQ83371.1| amino acid racemase [Aeromicrobium marinum DSM 15272]
          Length = 360

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 119/368 (32%), Gaps = 28/368 (7%)

Query: 7   LRLKIDLTALKNNWHSMN-ALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            RL+IDL  +++N  ++   L+        V K      G   +  A+   G +    + 
Sbjct: 5   PRLEIDLDDVEHNTRALVGRLAPRGISVQGVTKAV---CGNPSVGAAMMRGGARGLADSR 61

Query: 65  VEEGVKLRLYTPQARI-FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
           +E    LR   P+A    V   +    ++++ +         V      +        H 
Sbjct: 62  IENLAVLRRGDPRAPRTLVRSPMLSQVDRVVVEAGTSLNTEPVVLAALSASAAGHRDRHA 121

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD---PSSHVNSVQLE 180
             L V+ G  R G+++ + +D   +        L  + ++LAC          ++ +   
Sbjct: 122 VVLMVELGDLREGVAVGDVVDLARHVGALGGLALVGLGTNLACQSGVVPDQRSMDELSGL 181

Query: 181 RFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEA 240
                 S    +      +S  L        + R      G +  +      +  +    
Sbjct: 182 VDAVERSSSLVLPVVSGGNSANLGWAMTTRSVGRINQLRLGESILLGTDPLRRASIPG-- 239

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
            + L    L GE++     K        A +A           +   +  +         
Sbjct: 240 -LRLDACVLVGEVIEVK-TKPARAWGATAQSAFERRPRRRGRGTVRQALVAVGRQDTDP- 296

Query: 301 FIKGYMVP----ILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYD 356
              G  VP    ILG ++ D  + D+ D  +  VGD ++ FG D       L + T+ Y 
Sbjct: 297 --DGLTVPDGMTILG-MSSDHLVLDVGDHATA-VGDELR-FGVDYSAL---LRASTSPY- 347

Query: 357 LLVRIGTR 364
            +  +  R
Sbjct: 348 -VTTVEHR 354


>gi|326329098|ref|ZP_08195427.1| putative alanine racemase [Nocardioidaceae bacterium Broad-1]
 gi|325953180|gb|EGD45191.1| putative alanine racemase [Nocardioidaceae bacterium Broad-1]
          Length = 350

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 81/281 (28%), Gaps = 25/281 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAP-----ALYNAGVQDF 60
            L+L +D    + +  +    +       V K N YGL   K+A           GV   
Sbjct: 2   PLKLTVDADRWRKHVQTFAEATPG--LVPVAKGNGYGLTLRKLAHQTEWLTSLGTGVDTL 59

Query: 61  FVTSVEEGVKL--RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
            V +  E  ++  R       +       P     I D     +I ++ +      L+  
Sbjct: 60  AVGTYNEVWEVATRFSGSIYVLTPWRPYSPEINPEIAD----RIIHTISRPEDLPLLLER 115

Query: 119 GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
             +    L++ T   R G++  +       +      +   +   L   D  S      Q
Sbjct: 116 QPNARVILELVTSMRRHGMTPSDLWPTASIAREHARFEGVTMHFGL---DGGSLAEVRAQ 172

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           ++      +    +    A+    L            G  ++            +  +  
Sbjct: 173 MDAVVGAEAKTVWVSHLSANELAQLR--------ASYGDIIFRPRVGTALWLGDRGALHV 224

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
            A +  +     G    Y G+    R   + VA+ G A G 
Sbjct: 225 TATVEDVHPLERGYSYGYRGR-TAMRAGHLVVASGGTAHGI 264


>gi|170758708|ref|YP_001787366.1| alanine racemase domain-containing protein [Clostridium botulinum
           A3 str. Loch Maree]
 gi|169405697|gb|ACA54108.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 355

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 108/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIRQLIDLCNMKEIKPVIVTKSFC----AEKLVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + + + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVSKVIEYSDVSLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+ S+ S                 G++    G    + +       + 
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHIIVNDSMPKGVNQLRIGEAAILGRETAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 NFYE---DSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDGLIPKDNEIEILGASS-DHLLLDLTKCENQYKIGDTVEF 334


>gi|311742136|ref|ZP_07715946.1| alanine racemase domain protein [Aeromicrobium marinum DSM 15272]
 gi|311314629|gb|EFQ84536.1| alanine racemase domain protein [Aeromicrobium marinum DSM 15272]
          Length = 342

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/351 (14%), Positives = 104/351 (29%), Gaps = 55/351 (15%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE- 67
           L +D    +++  ++   +       VVK N YG G +++A      G     V +  E 
Sbjct: 5   LHVDTVRWRSHLTTLAEATAG--LVPVVKGNGYGFGRDRLAAEASAFGADTIAVGTYAEV 62

Query: 68  --GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
              ++         + VL    P    ++ D  ++  +  V  +   +      V     
Sbjct: 63  PGALE----AFDGDVMVLTPWRPFTTDVVLDPRVVHTVGRVADVAALADHPGTRV----V 114

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLI----ISHLACADDPSSHVNSVQLER 181
           ++ +T  +R G    E         + ++   ++       HL  AD  ++ +++ +LE 
Sbjct: 115 VEGETSMSRHGFDRHELAAAVAALGDLQVDGFAVHLPLTGGHLGEADRWAAALDASRLET 174

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
               +SH   +E +                  R            +        +     
Sbjct: 175 TTFFVSHLTPVELTELRE--------------RRPHLTVRPRIGTSLWLGDLAALEVRGT 220

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY------------PLTLSGLDSE 289
           ++ +     GE V Y     + RD  + V A G + G                 S     
Sbjct: 221 VLDVHAVARGEQVGYRQ-GAVHRDGHLLVIAGGTSHGVGLEAPKAAAGAVARGKSLARGG 279

Query: 290 HSPSVFLGGKGFIKGYMV-----PILGKITMDMTMFDITDSLSI-EVGDYI 334
              +        + G        P      M  +M  +     +  VGD +
Sbjct: 280 LEAAGRSRSPFTVDGRQRWFVEPPH-----MQASMVFLPAGARVPAVGDTV 325


>gi|168179682|ref|ZP_02614346.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           NCTC 2916]
 gi|182669231|gb|EDT81207.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           NCTC 2916]
          Length = 355

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 109/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIRQLIDLCNIKEIKPVIVTKSFC----AEKLVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + I + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVTKVIEYSDISLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALATVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+ S+ S                 GI+    G    + + +     + 
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRENAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 ---DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDGLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|309389791|gb|ADO77671.1| alanine racemase domain protein [Halanaerobium praevalens DSM 2228]
          Length = 360

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 6/165 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ++ R+ IDL+ LK+N+  +N      +     V K  A   G +KI     N+GV+    
Sbjct: 2   KYPRIDIDLSKLKSNFTKLNTKCLEKKINLTVVTKGIA---GDQKIIETFINSGVKSIAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           + ++   K+R    Q  I +L      +     D     +++ +      +K  +     
Sbjct: 59  SRLDNIKKIRKLNYQGEIILLRIPKKTEINEAVDYIDYSLVTELESCKLLAKAANKKNKK 118

Query: 123 PYAL-QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
              +  VD G  R G+  Q+  DF           L  I ++L C
Sbjct: 119 IGVIVMVDIGDRREGVMPQDLTDFIQKIIKLPGLYLEGIGTNLGC 163


>gi|328883726|emb|CCA56965.1| hypothetical protein SVEN_3679 [Streptomyces venezuelae ATCC 10712]
          Length = 343

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 74/255 (29%), Gaps = 29/255 (11%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E++A      G     V +  E  K++ +     + VL     G+E
Sbjct: 26  VIPVCKGNGYGFGHERLADEAARFGADMLAVGTTYEAAKIKDW-FSGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     +I  +SSV         +   V     ++  +   R G+  +E          
Sbjct: 85  PVPLPDRVIRSVSSV-------DGVHALVGARVVIECMSSMKRHGVREEELPQL---HSA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
            +  +L     HL       +      +     L +    +     S             
Sbjct: 135 IEDVRLEGFALHLPLDRPDGTDAVEEVIGWMDRLRAARLPLHTMFVSHLRAEEQARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  +                 ++ + +   G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHEATE----------YRGAVLDVTRVAKGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY 279
           D  + V A G + G 
Sbjct: 244 DGWLVVVAGGTSHGV 258


>gi|260772717|ref|ZP_05881633.1| predicted amino acid racemase [Vibrio metschnikovii CIP 69.14]
 gi|260611856|gb|EEX37059.1| predicted amino acid racemase [Vibrio metschnikovii CIP 69.14]
          Length = 356

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 6/165 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + RL+I+ T + +N   + A           V K ++ G     +A    NAG      
Sbjct: 2   NYPRLEINCTKIIHNTQYLMAELHLKAISVTPVTKASS-GH--PLLAQLFINAGATMLAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVS 121
           + VE   ++R       + ++      Q   +     I + + +  +   S         
Sbjct: 59  SRVENMQRMRCSGISIPLMLIRTPMLSQIAGVISDCSISLNTEIEVIQALSDEAQRTNSD 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
           H   + V+ G  R G+  ++ +DF           +  I ++LAC
Sbjct: 119 HSVIIMVELGDLREGVMAKDLVDFIRRIVLLPNIIIKGIGANLAC 163


>gi|157364143|ref|YP_001470910.1| alanine racemase domain-containing protein [Thermotoga lettingae
           TMO]
 gi|157314747|gb|ABV33846.1| alanine racemase domain protein [Thermotoga lettingae TMO]
          Length = 356

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 62/351 (17%), Positives = 104/351 (29%), Gaps = 44/351 (12%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             RL I+L  L+ N   + +L    N     V K +   LG  ++A  + NAGV     +
Sbjct: 1   MPRLYINLRLLEKNTKEVLSLCSKHNVELIGVTKVS---LGDPQVAQCIRNAGVNIIGES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            VE   ++          +L      Q + I D     ++S +  +        + G S 
Sbjct: 58  RVENIKRMVKSGINRPFMMLRIPAISQLEEIVDLCDYILVSELKTVEAIEEICKNAGKSV 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSL--IISHLACADDPSSHVNSVQLE 180
                VD G  R G+  ++A +    +         +    +         ++ N  +L 
Sbjct: 118 NLIYMVDVGDLREGVWYKQAEEEICKAVKICKTSRIIGVGTNLGCYGGILPTNENMAKLV 177

Query: 181 RFRTLISHYKGIEASLASSSG--------ILLGPNYHFQLTRPGISLYGGTDKINKSHPM 232
             R  I         + S               P    Q       + G     N+    
Sbjct: 178 YIRDKIEQRTNTHLPIVSGGNTAALRLLEHSDLPEGVNQYRVGEAIMLGTDVTNNRKIDW 237

Query: 233 --QTVVTAEARIILIRK---ALAGEL----VSYGGQKKLTRDSLIAVAAIGYADGYPLTL 283
             Q  V  EA +I ++       G+                    A+ A+G  D  P  L
Sbjct: 238 LEQKTVVLEAEVIEMKTKPSVPEGQSGLDAFGRQPVFVDKGLRKRAILALGEQDTVPKHL 297

Query: 284 SGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDY 333
                     +    +              + D T+ DIT+    I VGD 
Sbjct: 298 K--------PLDKNAEVIHA----------SSDHTIVDITEVQRQINVGDT 330


>gi|257469535|ref|ZP_05633627.1| Serine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|317063779|ref|ZP_07928264.1| serine racemase [Fusobacterium ulcerans ATCC 49185]
 gi|313689455|gb|EFS26290.1| serine racemase [Fusobacterium ulcerans ATCC 49185]
          Length = 369

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 107/347 (30%), Gaps = 26/347 (7%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M         + ++  AL+NN  +   +          ++K         ++      AG
Sbjct: 1   MKKENLKTPAILLNFDALENNIKTYQKMCDDNGKELWPMIKT----HKSMELLKLQIEAG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT----NLIPVISSVPQLTFY 112
                  +++E         +  ++          + I +     + I  + ++      
Sbjct: 57  ATGALCGTLDEAEACCRIGLKKIMYAYPAASKESIERIIELTKKSDFIVRLDNLEAAKMI 116

Query: 113 SKLMS-CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
           + +    GV   Y + VD+G +R GL + + ++F     + K  +L  + +H        
Sbjct: 117 NDMAIAAGVVVSYTIIVDSGLHRFGLPVDKIVEFADKLKDMKGLKLRGLSTHPGH---VY 173

Query: 172 SHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
           S     ++ ++               + +G  L   Y    + P  S       IN  HP
Sbjct: 174 SATCENEVPKYIADECQTIAAAKKYMNDAGYEL--EYITSGSTPTFSEAVKDKNINVFHP 231

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEH 290
              V     ++ + +  +    ++            + +   G    G      G  S  
Sbjct: 232 GNYVFLDTIQLSIKKAEIKDCALTVYTTIISHPKEDLFICDAGAKCLGLDQGAHGNSSIV 291

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
                +G    I   +   +GK         I    +++VGD I+I 
Sbjct: 292 GFGTVIGHPEAIVASLSEEVGK-------LHIHGETNLKVGDKIEII 331


>gi|126698022|ref|YP_001086919.1| putative amino acid racemase [Clostridium difficile 630]
 gi|115249459|emb|CAJ67274.1| ornithine racemase [Clostridium difficile]
          Length = 354

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 10/140 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGC-EKIAPALYNAGVQDFFV 62
           + RL+ID+  LK+N   ++ +    N + + V K         ++I   + + G+     
Sbjct: 2   YPRLEIDIEKLKHNVKLISQMCHERNIKISFVTKSFC----AQKEIVEEICSEGIDHIAD 57

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + ++    L+         ++      + + + +   I   S +  +   ++   S  + 
Sbjct: 58  SRIQNLKNLQD--INLPKILIRIPMLSELEEVINYCDISFNSELGTIKKLNELCESKNII 115

Query: 122 HPYALQVDTGFNRLGLSLQE 141
           H   L  D G  R G   +E
Sbjct: 116 HKIVLMFDLGDLREGYFYEE 135


>gi|294630313|ref|ZP_06708873.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292833646|gb|EFF91995.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 343

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 107/346 (30%), Gaps = 46/346 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SS+  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPYRRGEEPVPLPDRVIRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G++ QE           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGVTEQELPQL---QSAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  D                 ++
Sbjct: 174 PLHTMFVSHLKAEELVRLQQQFPQTRFRARIGTRLWLGDHDATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGK 299
            + +   G+   Y  QK  + D  + V A G + G     P  L G+    +  V   G 
Sbjct: 224 DVTRVAKGDRFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMP-RAKGVARAGL 281

Query: 300 GFIKGYMVPIL--GK-------ITMDMTMFDI-TDSLSIEVGDYIQ 335
             +   + P +  GK         M +++  + +D+   +VGD + 
Sbjct: 282 ATVNRNLSPFVWGGKQRWFAEPPHMQVSILFVPSDAPEPKVGDELV 327


>gi|255305459|ref|ZP_05349631.1| putative amino acid racemase [Clostridium difficile ATCC 43255]
          Length = 354

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGC-EKIAPALYNAGVQDFFV 62
           + RL+ID+  LK+N   ++ +    N + + V K         ++I   + + G+     
Sbjct: 2   YPRLEIDIEKLKHNAKLISQMCHERNIKISFVTKSFC----AQKEIVEEICSEGIDHIAD 57

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + ++   KL+         ++      + + + +   I   S +  +   ++   S  + 
Sbjct: 58  SRIQNLKKLQD--INLPKILIRIPMLSELEEVINYCDISFNSELGTIKKLNELCESKNII 115

Query: 122 HPYALQVDTGFNRLGLSLQE 141
           H   L  D G  R G   +E
Sbjct: 116 HKIVLMFDLGDLREGYFYEE 135


>gi|322806239|emb|CBZ03807.1| putative cytoplasmic protein [Clostridium botulinum H04402 065]
          Length = 355

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 106/339 (31%), Gaps = 15/339 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFC----AEKSVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + I + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVTKVIEYSDISLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              +  I     I+ S+ S                 GI+     + +             
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSNLHMIVNDSIPKGINQLRIGEAVILGTETAYGQKLN 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
                    L GE++    +  +   ++   A           +            +   
Sbjct: 238 -DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFKDKGIMKRAILALGQQDIKLD 296

Query: 300 GFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
           G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 297 GLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|168184952|ref|ZP_02619616.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Bf]
 gi|237795407|ref|YP_002862959.1| alanine racemase, N-terminal domain-containing protein [Clostridium
           botulinum Ba4 str. 657]
 gi|182671997|gb|EDT83958.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Bf]
 gi|229262464|gb|ACQ53497.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           Ba4 str. 657]
          Length = 355

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 108/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIRQLIDLCNIKEIKPVIVTKSFC----AEKLVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + I + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVTKVIEYSDISLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALATVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+ S+ S                 GI+    G    + +       + 
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 ---DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDGLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|240172617|ref|ZP_04751276.1| putative S-adenosylmethionine decarboxylase [Mycobacterium
          kansasii ATCC 12478]
          Length = 647

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          L IDL  +++N  ++ A    A     VK N  G   E +   L   G + F V SV E 
Sbjct: 7  LTIDLARVRDNLQALRAALPEASIRYAVKANP-G---EPVLRLLAGEGAE-FDVASVGEI 61

Query: 69 VKLRLYTPQARIFVL 83
             RL          
Sbjct: 62 DACRLAGIDGSRLAF 76


>gi|296327458|ref|ZP_06870004.1| serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296155284|gb|EFG96055.1| serine racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 369

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 95/359 (26%), Gaps = 50/359 (13%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   E     + +++ ALKNN      L          ++K         +I       G
Sbjct: 1   MKKKELKTPTILLNIEALKNNIKKYQKLCTEYKKELWPMIKT----HKSMEIVEMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         +  ++          K I +       +I + S    +  
Sbjct: 57  ATGALCGTLDEVEACCQIGIKKIMYAYPVASEENIKRIIEISKKTEFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLG-------LSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +  +   Y + VD+G +R G          +E     +            + S  
Sbjct: 117 NKMAETENIIINYNIIVDSGLHRFGVSLKNLLTFAEELKKLKYLKLKGISSHPGHVYSST 176

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL----TRPGISLY 220
             AD     ++  +  R    I   +G      +S            L      PG  ++
Sbjct: 177 CEADIQQYVLDECETLRKAKEILEKEGYYLEYITSGSTPTFEEAVKDLNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
             +    INK+      +T  A II                      +       G    
Sbjct: 237 LDSIQLSINKAKIKDCALTVLATIISH---------PSENLFICDAGAKCLGLDQGAH-- 285

Query: 279 YPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
                         +V    +  +   +   +GK         I    ++++GD I+I 
Sbjct: 286 -----GNNSIVGYGTVIDHPEVIV-SSLSEEVGK-------LKIEGETNLKIGDKIEII 331


>gi|160902435|ref|YP_001568016.1| alanine racemase domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360079|gb|ABX31693.1| alanine racemase domain protein [Petrotoga mobilis SJ95]
          Length = 354

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 7/198 (3%)

Query: 13  LTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           L  ++ N   + +L  ++      V K      G   IA AL   G+     + ++   K
Sbjct: 9   LERIQENAKYLKSLCADSGVEMVGVTKVV---CGEPTIARALKECGINILGDSRIQNIKK 65

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHPYALQVD 129
           +R    +    +L      +   + +     +IS +        + S           VD
Sbjct: 66  MRNSGIKGPFMLLRIPMFSELDDVANYVDYTLISDLEITKKLGTVSSKFNKRSKIIYMVD 125

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLERFRTLISH 188
            G  R G+  ++A+     + + +  ++  I ++L C         N  +L + +  I  
Sbjct: 126 VGDLREGVWFEKAVSEISKALDIEGIEIVGIGTNLGCFGGVIPDESNMGRLVKIKEEIQR 185

Query: 189 YKGIEASLASSSGILLGP 206
             G    + S       P
Sbjct: 186 ETGRTLDIISGGNTAALP 203


>gi|237744998|ref|ZP_04575479.1| serine racemase [Fusobacterium sp. 7_1]
 gi|260494775|ref|ZP_05814905.1| serine racemase [Fusobacterium sp. 3_1_33]
 gi|229432227|gb|EEO42439.1| serine racemase [Fusobacterium sp. 7_1]
 gi|260197937|gb|EEW95454.1| serine racemase [Fusobacterium sp. 3_1_33]
          Length = 369

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/364 (12%), Positives = 98/364 (26%), Gaps = 60/364 (16%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M   +     + +++ ALKNN      L          ++K         +I       G
Sbjct: 1   MQKKDLKTPTILLNIEALKNNIKKYQNLCTEYKKELWPMIKT----HKSMEIVEMQIKEG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT-----NLIPVISSVPQLTF 111
                  +++E         +  ++          K I +       +I + S    +  
Sbjct: 57  ATGVLCGTLDEAEACCQKDVKKIMYAYPVASEENIKRIIEMSKKTEFIIRLDSLEAAIKI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLG-------LSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +  +   Y + +D+G +R G          +E     +            + S  
Sbjct: 117 NKIAETENIIINYTIIIDSGLHRFGVSLKNLLTFAEELKKLKYLKLRGISSHPGHVYSST 176

Query: 165 ACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLG----PNYHFQLTRPGISLY 220
             AD     ++  +  R    +   +G      +S           + +  +  PG  ++
Sbjct: 177 CEADIHQYVLDECETLRKAKELLEKEGYYLKYITSGSTPTFEEAVKDSNINVYHPGNYVF 236

Query: 221 GGTD--KINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD- 277
             +    INK+      +T  A II                      +       G    
Sbjct: 237 LDSIQLSINKAKIKDCALTVLATIISH---------PSENLFICDAGAKCLGLDQGAHGN 287

Query: 278 ----GYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDY 333
               GY   ++  +          GK  I+G                      ++++GD 
Sbjct: 288 SSIIGYGTVINHPEIIVFSLSEEVGKLKIEGQT--------------------NLKIGDK 327

Query: 334 IQIF 337
           I+I 
Sbjct: 328 IEII 331


>gi|19553808|ref|NP_601810.1| hypothetical protein NCgl2520 [Corynebacterium glutamicum ATCC
           13032]
 gi|62391448|ref|YP_226850.1| hypothetical protein cg2890 [Corynebacterium glutamicum ATCC 13032]
 gi|41326789|emb|CAF21271.1| PUTATIVE AMINO ACID PROCESSING ENZYME [Corynebacterium glutamicum
           ATCC 13032]
          Length = 343

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 33/128 (25%), Gaps = 6/128 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID   L  N   M A +G    A    VK         +IA    +AG +     ++ E 
Sbjct: 10  IDRERLTANISRMAAHAGAHEIALRPHVKT----HKIIEIAQMQVDAGARGITCATIGEA 65

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
                                      +     +   V  +                ++V
Sbjct: 66  EIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIGVDSVEMAQATAGLREDIKALIEV 125

Query: 129 DTGFNRLG 136
           D+G  R G
Sbjct: 126 DSGHRRSG 133


>gi|239980811|ref|ZP_04703335.1| hypothetical protein SalbJ_15302 [Streptomyces albus J1074]
 gi|291452670|ref|ZP_06592060.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355619|gb|EFE82521.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 343

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 109/346 (31%), Gaps = 46/346 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    +++ H +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRDHHHQVREQFPG--IVPVCKGNGYGFGHERLAEEAIRFGSDILAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SSV  +          V     ++V +
Sbjct: 65  IKDW-FSGDLLVLTPFRRGEEPVPLPDRVIRSVSSVDGVHGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S ++           +  +L     HL       +      +     L +H  
Sbjct: 117 SMKRHGVSEEDLPKL---HAAIEDVRLEGFAIHLPLDRTDGTDAVEEVIAWMDRLRAHRL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKSSELARLQQQFPQTRFRARIGTRLWLGDEEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGK 299
            + +   G+   Y   +K   D  + V A G + G     P  L G+    +  V   G 
Sbjct: 224 DVTQVSKGDRFGYRQ-QKAAGDGYLVVVAGGTSHGVGLESPKALHGVMP-RAKGVARAGL 281

Query: 300 GFIKGYMVPIL--GK-------ITMDMTMFDIT-DSLSIEVGDYIQ 335
             +   + P +  GK         M +++  +  D+ + +VGD + 
Sbjct: 282 ATVNRNLSPFVWAGKQRWFAEPPHMQVSILFVPADAPAPQVGDELV 327


>gi|297544519|ref|YP_003676821.1| alanine racemase domain-containing protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296842294|gb|ADH60810.1| alanine racemase domain protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 354

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/352 (15%), Positives = 118/352 (33%), Gaps = 51/352 (14%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  L+I+L  L+ N  ++  L    N +   V K      G  +IA A+   GV+    +
Sbjct: 2   YPLLRINLRKLRKNTQTIVNLCEKRNIKVVGVTKVF---CGIPEIAQAMVKGGVEILGDS 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-H 122
            ++   KL          ++      + + +     I + S +  +   S+        H
Sbjct: 59  RIKNLKKL--QHIPVFKMLIRIPMISEVEEVIKYADISLNSEIDTIKSLSEEAKKHKKVH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLER 181
              L VD G  R G+  ++ +         +  +L  + ++L C      +     +L  
Sbjct: 117 EIILMVDLGDLREGMLKEDVIPAVEQIVKLEGIKLRGVGTNLTCYGSVIPTPDILEELVE 176

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEA 240
            +  I+    +   + S      G +    L + G+   G T  +I ++  +        
Sbjct: 177 IKNSINKKFDLNVDIVSG-----GNSSSLYLVQNGLIPKGITQLRIGEAIVLGRETAFGD 231

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI      +    +     +   + S            YP  + G+++     V++    
Sbjct: 232 RIPHTYDDVF--TLETQIIELKEKPS------------YPRGILGVNAFGERPVYVDRGI 277

Query: 301 FIKGYMVPILGK--ITM-----------------DMTMFDITDSL-SIEVGD 332
             +  +   +G+  + M                 D  + ++T+S    +VGD
Sbjct: 278 MKRAILA--IGRQDVNMGDLIPIDSTIELIGASSDHLIVNVTNSPYPYKVGD 327


>gi|302543988|ref|ZP_07296330.1| alanine racemase domain-containing protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302461606|gb|EFL24699.1| alanine racemase domain-containing protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 83/287 (28%), Gaps = 36/287 (12%)

Query: 22  SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF 81
            +    G      V K N YG G E++A      G     V +  E  +++ Y     + 
Sbjct: 19  VIQQFPG---IVPVCKGNGYGFGHERLAEEAARIGADVLAVGTTYEAARMKDY-FSGDLL 74

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQE 141
           VL     G+E +     +I  +SSV  +          V+    ++V +   R G++ ++
Sbjct: 75  VLTPFRRGEEPVPLPDRVIRSVSSVDGVYGL-------VNARVVIEVMSSMKRHGVTEED 127

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-- 199
                      +  +L     HL              +     L +    +     S   
Sbjct: 128 LPKL---HAAIENVRLEGFAIHLPLDRTDGIDAVEEVIGWMDRLRAARLPLHTMFVSHLK 184

Query: 200 -----SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELV 254
                      P   F+         G  +                 ++ + +   GE  
Sbjct: 185 ADELARLQQQFPQTRFRARIGTRLWLGDHESTE----------YRGAVLDVTRVAKGERF 234

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 235 GYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|170755191|ref|YP_001781537.1| alanine racemase domain-containing protein [Clostridium botulinum
           B1 str. Okra]
 gi|169120403|gb|ACA44239.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           B1 str. Okra]
          Length = 355

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 106/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFC----AEKSVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K+          +L      +   + + + + + S +  +   SK       
Sbjct: 60  DARMKNLMKI--QGLNCEKLLLRIPMKSEVSKVIEYSDVSLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALSAVKEIIKLPNLKFIGLGTNLTCYGGVLPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+ S+ S                 GI+    G    + +       + 
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 ---DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDGLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|21325381|dbj|BAC00003.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
          Length = 380

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 33/128 (25%), Gaps = 6/128 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID   L  N   M A +G    A    VK         +IA    +AG +     ++ E 
Sbjct: 47  IDRERLTANISRMAAHAGAHEIALRPHVKT----HKIIEIAQMQVDAGARGITCATIGEA 102

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
                                      +     +   V  +                ++V
Sbjct: 103 EIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGEISIGVDSVEMAQATAGLREDIKALIEV 162

Query: 129 DTGFNRLG 136
           D+G  R G
Sbjct: 163 DSGHRRSG 170


>gi|289523186|ref|ZP_06440040.1| amino acid racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503729|gb|EFD24893.1| amino acid racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 368

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 10/147 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAA--VVKDNAYGL-GCEKIAPALYNAGV 57
           M SN   +L+I L  +++N   +  L       A  V K    GL G  K+A A+ + G 
Sbjct: 9   MGSN--PKLRIGLEKIRDNASKVVELCKKTGIRAGGVTK----GLCGNLKVAEAMVDGGC 62

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLM 116
                + V+    L+         +L    P +   +     + ++S    +        
Sbjct: 63  SFLADSRVKNIANLKREGMNVPCMLLRLPMPSETDAVVTWADVSLVSMGETILLLDEACK 122

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEAL 143
                H   + VD G  R G+   +  
Sbjct: 123 IKNKFHEVVVMVDVGDLREGIWPSDVE 149


>gi|297200915|ref|ZP_06918312.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197716413|gb|EDY60447.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 343

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 86/298 (28%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SS+  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPYRRGEEPVPLPDRVIRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S QE           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGISEQELPQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  D                 ++
Sbjct: 174 PLHTMFVSHLKAEDLARLQQQFPQTRFRARIGTRLWLGDHDSTE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   G+   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVSKGDRFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|150389494|ref|YP_001319543.1| alanine racemase domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149949356|gb|ABR47884.1| alanine racemase domain protein [Alkaliphilus metalliredigens QYMF]
          Length = 367

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 9   LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +DL  L+ N   M  L+         +VK        E I       G +      + 
Sbjct: 11  LVVDLDQLEKNIEEMGVLAKDHGVALWPMVKT----HKSEYIVKKQLENGAEGVLAAKLG 66

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-----CGVS 121
           E  K+     +  +     I  G+ K +        +         +++++      G+ 
Sbjct: 67  EAEKMVEAGAKKVMMAYPIIGEGKLKRLVALTEKAEVFCSIDSLEVAEILNEKAITEGIV 126

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISH 163
               + +D+G  RLG++  E   F ++    +  ++  + +H
Sbjct: 127 FQCIILIDSGLKRLGIAPHEVKKFYNSLARLQGIKIVGVGTH 168


>gi|254974063|ref|ZP_05270535.1| putative amino acid racemase [Clostridium difficile QCD-66c26]
 gi|255091462|ref|ZP_05320940.1| putative amino acid racemase [Clostridium difficile CIP 107932]
 gi|255313189|ref|ZP_05354772.1| putative amino acid racemase [Clostridium difficile QCD-76w55]
 gi|255515880|ref|ZP_05383556.1| putative amino acid racemase [Clostridium difficile QCD-97b34]
 gi|255648975|ref|ZP_05395877.1| putative amino acid racemase [Clostridium difficile QCD-37x79]
 gi|260682166|ref|YP_003213451.1| putative amino acid racemase [Clostridium difficile CD196]
 gi|260685765|ref|YP_003216898.1| putative amino acid racemase [Clostridium difficile R20291]
 gi|306519091|ref|ZP_07405438.1| putative amino acid racemase [Clostridium difficile QCD-32g58]
 gi|260208329|emb|CBA60794.1| putative amino acid racemase [Clostridium difficile CD196]
 gi|260211781|emb|CBE02143.1| putative amino acid racemase [Clostridium difficile R20291]
          Length = 354

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 10/140 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGC-EKIAPALYNAGVQDFFV 62
           + RL+ID+  LK+N   ++ +    + + + V K         ++I   + + G+     
Sbjct: 2   YPRLEIDIEKLKHNAKLISQMCHERSIKISFVTKSFC----AQKEIVEEICSEGIDHIAD 57

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + ++   KL+         ++      + + + +   I   S +  +   ++   S  + 
Sbjct: 58  SRIQNLKKLQD--INLPKILIRIPMLSELEEVINYCDISFNSELETIKKLNELCESKNII 115

Query: 122 HPYALQVDTGFNRLGLSLQE 141
           H   L  D G  R G   +E
Sbjct: 116 HKIVLMFDLGDLREGYFYEE 135


>gi|255099568|ref|ZP_05328545.1| putative amino acid racemase [Clostridium difficile QCD-63q42]
          Length = 354

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 10/140 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGC-EKIAPALYNAGVQDFFV 62
           + RL+ID+  LK+N   ++ +    N + + V K         ++I   + + G+     
Sbjct: 2   YPRLEIDIEKLKHNAKLISQMCHERNIKISFVTKSFC----AQKEIVEEICSEGIDHIAD 57

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK-LMSCGVS 121
           + ++    L+         ++      + + + +   I   S +  +   ++   S  + 
Sbjct: 58  SRIQNLKNLQD--INLPKILIRIPMLSELEEVINYCDISFNSELGTIKKLNELCESKNII 115

Query: 122 HPYALQVDTGFNRLGLSLQE 141
           H   L  D G  R G   +E
Sbjct: 116 HKIVLMFDLGDLREGYFYEE 135


>gi|310815799|ref|YP_003963763.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25]
 gi|308754534|gb|ADO42463.1| alanine racemase domain protein [Ketogulonicigenium vulgare Y25]
          Length = 374

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 36/132 (27%), Gaps = 6/132 (4%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           ID   L+ N   M AL+G A     +K          IA     AG         EE + 
Sbjct: 20  IDQPTLQRNIDKMQALAGVAALWPHIKT----HKSPAIAQMQKTAGATGLTAALTEEALA 75

Query: 71  LRLYTPQARIFVLYGIHPGQEKI--IFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
           +              I P Q               +        +            +++
Sbjct: 76  MIDAGLGPVTLARPEIDPAQIARLLPHAYAGQLRFTVDHADHIAAIAAQAEGPVDILIKI 135

Query: 129 DTGFNRLGLSLQ 140
           D G +R+G+   
Sbjct: 136 DVGLHRMGIGPD 147


>gi|255994841|ref|ZP_05427976.1| putative cytoplasmic protein [Eubacterium saphenum ATCC 49989]
 gi|255993554|gb|EEU03643.1| putative cytoplasmic protein [Eubacterium saphenum ATCC 49989]
          Length = 359

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 7/141 (4%)

Query: 4   NEFLRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           N + RL I+  A+++N   +  L  +       V K  +      K+  ++       F 
Sbjct: 2   NRYPRLVINAEAIEHNTRLVQQLCRDNGIMLSVVTKGFS---SMPKLVSSISKIN-PIFS 57

Query: 62  VTSVEEGVKLRLYTPQAR-IFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
            + +E   ++R          +   +    E +I + N+   +       F         
Sbjct: 58  DSRIETIKQMREAGINGHITLIRSPMMSEAEDVINNCNMSFHVDKAVLKHFDEVAGRLSK 117

Query: 121 SHPYALQVDTGFNRLGLSLQE 141
            H   L  D G  R G    E
Sbjct: 118 KHDVLLMCDVGDLREGPFYDE 138


>gi|289578239|ref|YP_003476866.1| alanine racemase domain protein [Thermoanaerobacter italicus Ab9]
 gi|289527952|gb|ADD02304.1| alanine racemase domain protein [Thermoanaerobacter italicus Ab9]
          Length = 354

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 115/339 (33%), Gaps = 25/339 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +  L+I+L  L+ N  ++  L    N +   V K      G  +IA A+   GV+    +
Sbjct: 2   YPLLRINLRKLRKNTQTIVNLCEKRNIKVVGVTKVF---CGIPEIAQAMVKGGVEILGDS 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS-H 122
            ++   KL          ++      + + +     I + S +  +   S+        H
Sbjct: 59  RIKNLKKL--QHIPVFKMLIRIPMISEVEEVIKYADISLNSEIDTIKSLSEEAKKHKKVH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLER 181
              L VD G  R G+  ++ +         +  +L  + ++L C      +     +L  
Sbjct: 117 EIILMVDLGDLREGMLKEDVIPAVEQIVKLEGIKLRGVGTNLTCYGSVIPTPDILEELVE 176

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVTAEA 240
            +  I+    +   + S      G +    L + G+   G T  +I ++  +        
Sbjct: 177 IKNSINKKFDLNVDIVSG-----GNSSSLYLVQNGLIPKGITQLRIGEAIVLGRETAFGD 231

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKG 300
           RI      +    +     +   + S         A G               + +G + 
Sbjct: 232 RIPHTYDDVF--TLETQIIELKEKPSYPRGILGVNAFGERPVYVDRGIMKRAILAIGRQD 289

Query: 301 FIKGYMVPI------LGKITMDMTMFDITDSL-SIEVGD 332
              G ++PI      +G  + D  + ++T+S    +VGD
Sbjct: 290 VYMGDLIPIDSTIELIGASS-DHLIVNVTNSPYPYKVGD 327


>gi|268315648|ref|YP_003289367.1| alanine racemase domain-containing protein [Rhodothermus marinus
           DSM 4252]
 gi|262333182|gb|ACY46979.1| alanine racemase domain protein [Rhodothermus marinus DSM 4252]
          Length = 396

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 49/175 (28%), Gaps = 23/175 (13%)

Query: 11  IDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ID   L  N   M   +         +A+T              ++A      G     V
Sbjct: 14  IDRQRLLGNLREMQQRATQEGVALRPHAKT----------HKTPELARLQQELGATGITV 63

Query: 63  TSVEEGVKLRLYTPQ----ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMS 117
            +V+E              A   V    +     ++    +   + +   +   S    +
Sbjct: 64  ATVDEAEAFVAAGLTDVRVAYPTVGIDRYERLLALMAQARISFCLDTPEAIRAASDFFAA 123

Query: 118 CGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
            G      L+VDTGF R G+   +A      +   +      +I  L  A     
Sbjct: 124 RGRQAEVLLEVDTGFGRTGVRWDDARRLVDCARLIQESPGLRLIGLLTHAGQAYH 178


>gi|302559690|ref|ZP_07312032.1| alanine racemase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302477308|gb|EFL40401.1| alanine racemase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 343

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 106/346 (30%), Gaps = 46/346 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SSV  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPYRRGEEPVPLPDRVIRSVSSVDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+  Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGIGEQDLAQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  D                 ++
Sbjct: 174 PLHTMFVSHLKADELARLQQQFPQTRFRARIGTRLWLGDHDATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGK 299
            + +   G+   Y  QK  + D  + V A G + G     P  L G+    +  V   G 
Sbjct: 224 DVTRVAKGDRFGYRQQKAAS-DGYLVVVAGGTSHGVGLEAPKALHGVMP-RAKGVARAGL 281

Query: 300 GFIKGYMVPIL--GK-------ITMDMTMFDI-TDSLSIEVGDYIQ 335
             +   + P +  GK         M +++  + +D+   +VGD + 
Sbjct: 282 ATVNRNLSPFVWGGKQRWFAEPPHMQVSILFVPSDAPEPQVGDELV 327


>gi|330895722|gb|EGH28012.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 31

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 6/28 (21%), Positives = 13/28 (46%), Gaps = 1/28 (3%)

Query: 343 LDDVALASGTTNYDLLVRIGTRYAKFYT 370
             +VA  + T  Y++   +  R  + Y+
Sbjct: 3   ASEVAQRAETIPYEIFCNL-RRVPRIYS 29


>gi|193216675|ref|YP_001999917.1| alanine racemase-like protein [Mycoplasma arthritidis 158L3-1]
 gi|193001998|gb|ACF07213.1| alanine racemase-like protein [Mycoplasma arthritidis 158L3-1]
          Length = 352

 Score = 50.0 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 9/202 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           + R+ I+    KNN      +  + N    AV K     +G  ++A   Y AG++ F  +
Sbjct: 2   YPRIVINEAKFKNNIKKAIEICKAKNIEVLAVTKGF---VGQRRMAELYYEAGIRYFGDS 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            ++   ++    P  +  +   +   +   + +     +   +  +       +     H
Sbjct: 59  RLDN-FEVYKDIPGHKQMLRLPML-EEIPRLVELCDSSLNGDLTIIKAISEYCLKVNKVH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP-SSHVNSVQLER 181
              L +D G  R G+  ++ L         +   L  I  +  C      S     +   
Sbjct: 117 DIVLMIDMGDRREGILPEDTLKVVKEILEYRGVNLIGIGCNFGCYGARVPSKETMDKFVS 176

Query: 182 FRTLISHYKGIEASLASSSGIL 203
            +  I     ++    S    L
Sbjct: 177 LKKAIETTYNLKLKHISGGNSL 198


>gi|295111090|emb|CBL27840.1| Predicted amino acid racemase [Synergistetes bacterium SGP1]
          Length = 371

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/342 (15%), Positives = 113/342 (33%), Gaps = 29/342 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVK---DNAYGLGCEKIAPALYNAGVQD 59
            + ++++DL  L  N   ++ L  +   +   V K           E +  AL +AG+++
Sbjct: 2   RYPQIRVDLDKLLENARVLSGLLSAHKLKFHYVTKCFCAW------EPMVDALADAGIRN 55

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           F    +E    L+ +   A +  +  I    + +      +    +V +    +  ++ G
Sbjct: 56  FADARLENIEVLKRWARSAMLLRVPMISEADDVVCLCDVSLNSELAVIEALSDA-ALTLG 114

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQ 178
            +H   L V+ G  R G   ++ +         +  +L+ +  +  C      +     +
Sbjct: 115 RTHEVILMVELGDLREGALPEDVMPMVEQILTMRGVKLAGLGVNFNCYGGVIPTPAKLKE 174

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           L        +  G E    S       P         GI+      +I ++  +    + 
Sbjct: 175 LADLAKEAQNRCGYEFEYVSGGNSGSLPLVFDDRIPSGINHL----RIGEAFLLGHETSY 230

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            + I  +   +         +KKL          +      P  +          + +GG
Sbjct: 231 GSSIPGMLHDVFTLRCEV-IEKKLKHSVPSGERGLNAFGEPPAEMEDRGMIQRAIIAVGG 289

Query: 299 KGFI--------KGYMVPILGKITMDMTMFDITDSL-SIEVG 331
           +           +G     LG  + D T+FD+T +   + VG
Sbjct: 290 QDTFPFSLTPRMEGLRY--LGHYSSDHTIFDVTHAKGDVHVG 329


>gi|170692411|ref|ZP_02883574.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
 gi|170142841|gb|EDT11006.1| alanine racemase domain protein [Burkholderia graminis C4D1M]
          Length = 380

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           + S E     +D+  ++ N  +M     +   +    VK       C ++A A   AG +
Sbjct: 3   LDSQETPAAIVDVRKMEKNIAAMQERMNALGVKFRPHVKT----SKCVEVAQAQIAAGAR 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYS 113
              V++++E            ++ +  +     +++          I V ++   L    
Sbjct: 59  GITVSTLKEAESFFAAGIVDILYAVSIVPSKLPRVMALRKRGCDLKIVVDNASAALAIVE 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDF 145
              + G S    ++VDT  +R GL  +E    
Sbjct: 119 FCKTAGESLEVWIEVDTDGHRSGLKPEEDALL 150


>gi|312883710|ref|ZP_07743433.1| alanine racemase domain-containing protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309368627|gb|EFP96156.1| alanine racemase domain-containing protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 368

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 6/109 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +DL  +  N  +M     +         K          IA    +AG +   V  + 
Sbjct: 11  LLVDLDKMNQNIETMQQRINDLGLMLRPHTKA----HKSPIIAQRQIDAGAKGICVAKLG 66

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
           E   +        +         + + + +  L        Q+  +   
Sbjct: 67  EAEVMAEGGISDILITTPIAGEKKIQRLINLYLKYPDFRFIQVIDHHDH 115


>gi|73662017|ref|YP_300798.1| amino acid racemase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494532|dbj|BAE17853.1| putative amino acid racemase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 353

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             ++KI+L+ +K N   ++++    + R  AV+K      G  +I   L   G+  F   
Sbjct: 1   MAQVKINLSKIKYNAQVLSSIFNQNHIRFTAVIKCVG---GDNRIVETLKEIGLTHFADA 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
            +E   K +         ++      +   +     I + + +  +   + +    G  H
Sbjct: 58  RIENITKSKNE--DLSFMMIRTPSRSELNDVVQQTDISIQTEITTIRRLNDIAREKGTKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + +D+ +         +  +  +  C      +  +   + +
Sbjct: 116 KILLMVDWKDGREGILTYDIIDYINEILYMHHVSIVGLAFNFMCFQSVIPTEEDVALINQ 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHF 210
           F   +     ++ S+ S     + P   +
Sbjct: 176 FVDSVERETNMKFSIISGGNSSMIPQMLY 204


>gi|302552670|ref|ZP_07305012.1| alanine racemase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302470288|gb|EFL33381.1| alanine racemase domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 343

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 86/298 (28%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SS+  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPYRRGEEPVPLPDRVIRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGISEQDLPQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKAEELVRLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   GE   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVSRVTKGERFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|148379935|ref|YP_001254476.1| alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|153933254|ref|YP_001384234.1| alanine racemase domain-containing protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937081|ref|YP_001387774.1| alanine racemase domain-containing protein [Clostridium botulinum A
           str. Hall]
 gi|148289419|emb|CAL83515.1| putative alanine racemase [Clostridium botulinum A str. ATCC 3502]
 gi|152929298|gb|ABS34798.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A str. ATCC 19397]
 gi|152932995|gb|ABS38494.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A str. Hall]
          Length = 355

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 108/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFC----SEKSVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + I + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVSKVIEYSDISLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+ S+ S                 GI+    G    + +       + 
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 ---DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDGLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|187779411|ref|ZP_02995884.1| hypothetical protein CLOSPO_03007 [Clostridium sporogenes ATCC
           15579]
 gi|187773036|gb|EDU36838.1| hypothetical protein CLOSPO_03007 [Clostridium sporogenes ATCC
           15579]
          Length = 355

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 105/345 (30%), Gaps = 29/345 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART-AAVV-------KDNAYGLGCEKIAPALYNAGV 57
           +  ++I+L  +  N   +  L   A    A+V       K          +   +   G+
Sbjct: 5   YPCVEINLKNITYNIGRLIDLCNGAGIELAIVTKSFCAEKA---------VVETIIKEGI 55

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           +      ++  +K++         +L      +   + +   I + S +  +   SK   
Sbjct: 56  KTIADARMKNLMKIQDL--NCEKLLLRIPMKSEVSKVIEYADISLNSELEIIKELSKEAM 113

Query: 118 C-GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVN 175
                H   L +D G  R G+  ++ L            +   + ++L C         N
Sbjct: 114 KVNKIHKIILMIDLGDLREGILPKDVLPTVKEIIKLPNLEFVGVGTNLTCYGGVIPDENN 173

Query: 176 SVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQ 233
             +L   +  I +   I+ S+ S                 GI+    G    + +     
Sbjct: 174 LGKLLEIKNQIENELKIKVSIVSGGNSSSLHMIVNDSIPQGINQLRIGEAAILGRETAFG 233

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
             +            L GE+V    +  +   ++   A           +          
Sbjct: 234 QKLDNFYE---DCVTLVGEIVELKEKPSMPEGNIGLDAFGNKPSFIDKGIMKRAILALGQ 290

Query: 294 VFLGGKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
             +   G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 291 QDIKLDGLIPKNSEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|153938559|ref|YP_001391298.1| alanine racemase domain-containing protein [Clostridium botulinum F
           str. Langeland]
 gi|152934455|gb|ABS39953.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           F str. Langeland]
 gi|295319329|gb|ADF99706.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           F str. 230613]
          Length = 355

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 106/341 (31%), Gaps = 19/341 (5%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIKQLIDLCNMKEIKPVIVTKSFC----AEKSVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++         +L      +   + + + + + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--NCEKLLLRIPMKSEVSKVIEYSDVSLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+   +AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPNDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISL--YGGTDKINKSHPMQTVVT 237
              +  I     I+AS+ S                 GI+    G    + +       + 
Sbjct: 178 LEIKNQIEKELKIKASIVSGGNSSSLHMIVNDSIPKGINQLRIGEAAILGRETAYGQKLN 237

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                      L GE++    +  +   ++   A           +            + 
Sbjct: 238 ---DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIK 294

Query: 298 GKGFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
               I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 295 LDDLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDTVEF 334


>gi|262381465|ref|ZP_06074603.1| D-threonine aldolase [Bacteroides sp. 2_1_33B]
 gi|262296642|gb|EEY84572.1| D-threonine aldolase [Bacteroides sp. 2_1_33B]
          Length = 367

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 23/154 (14%)

Query: 10  KIDLTALKN-------NWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +ID  AL         N      + G+  R    VK N       +++  L +AG++ F 
Sbjct: 12  RIDSPALAFYPDRISGNIELAKRIIGDTNRLRPHVKTN----KAAEVSRMLLDAGIRKFK 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQ---------EKIIFDTNLIPVISSVPQLTFY 112
             ++ E   L      A   +L     G          +          V  +       
Sbjct: 68  CATIAEAEML--GHINAPDVLLAYQPVGPKISRLLDLIKAYPATHYSCLVDQAENARAIS 125

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
           +   +  ++    + ++ G NR G+  + A    
Sbjct: 126 ALCEAGNITLDVFIDLNVGMNRTGVLPERAEALV 159


>gi|301309990|ref|ZP_07215929.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Bacteroides
           sp. 20_3]
 gi|300831564|gb|EFK62195.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Bacteroides
           sp. 20_3]
          Length = 367

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 23/154 (14%)

Query: 10  KIDLTALKN-------NWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +ID  AL         N      + G+  R    VK N       +++  L +AG++ F 
Sbjct: 12  RIDSPALAFYPDRISGNIELAKRIIGDTNRLRPHVKTN----KAAEVSRMLLDAGIRKFK 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQ---------EKIIFDTNLIPVISSVPQLTFY 112
             ++ E   L      A   +L     G          +          V  +       
Sbjct: 68  CATIAEAEML--GHINAPDVLLAYQPVGPKISRLLDLIKAYPATHYSCLVDQAENARAIS 125

Query: 113 SKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
           +   +  ++    + ++ G NR G+  + A    
Sbjct: 126 ALCEAGNITLDVFIDLNVGMNRTGVLPERAEALV 159


>gi|226949272|ref|YP_002804363.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A2 str. Kyoto]
 gi|226843119|gb|ACO85785.1| alanine racemase, N-terminal domain protein [Clostridium botulinum
           A2 str. Kyoto]
          Length = 355

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 106/339 (31%), Gaps = 15/339 (4%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVV--KDNAYGLGCEK-IAPALYNAGVQDFF 61
            +  ++I+L  + +N   +  L        V+  K        EK +   +   G++   
Sbjct: 4   SYPCVEINLKNIAHNIKQLIDLCNIKEIKPVIVTKSFC----AEKSVVETIIKEGIKTIA 59

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GV 120
              ++  +K++    +    +L      +   + + + I + S +  +   SK       
Sbjct: 60  DARMKNLMKIQDL--KCEKLLLRIPMKSEVTKVIEYSDISLNSELEIIKELSKEARKVNK 117

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQL 179
            H   L VD G  R G+  ++AL            +   + ++L C         N  +L
Sbjct: 118 IHKIILMVDLGDLREGVLPKDALSTVKEIIKLPNLKFIGLGTNLTCYGGVIPDENNLGKL 177

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAE 239
              +  I     I+ S+ S                 GI+     + +             
Sbjct: 178 LEIKNQIEKELKIKVSIVSGGNSSSLHMIVNDSIPKGINQLRIGEAVILGTETAYGQKLN 237

Query: 240 ARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGK 299
                    L GE++    +  +   ++   A           +            +   
Sbjct: 238 -DFYEDSITLVGEIIELKEKPSMPEGNIGLDAFGNKPSFEDKGIMKRAILALGQQDIKLD 296

Query: 300 GFI-KGYMVPILGKITMDMTMFDITDSLS-IEVGDYIQI 336
           G I K   + ILG  + D  + D+T   +  ++GD ++ 
Sbjct: 297 GLIPKDNEIEILGASS-DHLLLDLTKCKNQYKIGDAVEF 334


>gi|239930199|ref|ZP_04687152.1| hypothetical protein SghaA1_18362 [Streptomyces ghanaensis ATCC
           14672]
 gi|291438542|ref|ZP_06577932.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291341437|gb|EFE68393.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 343

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 107/346 (30%), Gaps = 46/346 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SSV  +          V     ++V +
Sbjct: 65  IKDW-FSGDLLVLTPYRRGEEPVPLPDRVIRSVSSVDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGISEQDLPQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKADELARLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGK 299
            + +   G+   Y  QK  + D  + V A G + G     P  L G+    +  V   G 
Sbjct: 224 DVTRVAKGDRFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMP-RAKGVARAGL 281

Query: 300 GFIKGYMVPIL--GK-------ITMDMTMFDI-TDSLSIEVGDYIQ 335
             +   + P +  GK         M +++  + TD+   +VG+ + 
Sbjct: 282 ATVNRNLSPFVWGGKQRWFAEPPHMQVSILFVPTDAPEPKVGEELV 327


>gi|329938663|ref|ZP_08288059.1| hypothetical protein SGM_3551 [Streptomyces griseoaurantiacus M045]
 gi|329302154|gb|EGG46046.1| hypothetical protein SGM_3551 [Streptomyces griseoaurantiacus M045]
          Length = 343

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 92/311 (29%), Gaps = 36/311 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHQKHVQDQFPG--LVPVCKGNGYGFGHERLAEEATRMGSDILAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SS+  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPFRRGEEPVPLPDRVIRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGVSEQDLPQL---HSAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKADELARLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGK 299
            + +   GE   Y  QK  T D  + V A G + G     P  L G+    +  V   G 
Sbjct: 224 DVTRVAKGERFGYRQQKAAT-DGYLVVVAGGTSHGVGLEAPKALHGVMP-RAKGVARAGL 281

Query: 300 GFIKGYMVPIL 310
             +   + P +
Sbjct: 282 ATVNRNLAPFV 292


>gi|302333818|gb|ADL24011.1| alanine racemase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 356

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVQTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|15925168|ref|NP_372702.1| hypothetical protein SAV2178 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927758|ref|NP_375291.1| hypothetical protein SA1980 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268623|ref|YP_001247566.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150394688|ref|YP_001317363.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156980493|ref|YP_001442752.1| hypothetical protein SAHV_2162 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253734405|ref|ZP_04868570.1| amino acid racemase [Staphylococcus aureus subsp. aureus TCH130]
 gi|255006961|ref|ZP_05145562.2| hypothetical protein SauraM_10850 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793382|ref|ZP_05642361.1| alanine racemase [Staphylococcus aureus A9781]
 gi|258406992|ref|ZP_05680144.1| alanine racemase [Staphylococcus aureus A9763]
 gi|258419926|ref|ZP_05682886.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A9719]
 gi|258439259|ref|ZP_05690237.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A9299]
 gi|258442161|ref|ZP_05691064.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258446720|ref|ZP_05694875.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A6300]
 gi|258449221|ref|ZP_05697326.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A6224]
 gi|258455466|ref|ZP_05703426.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A5937]
 gi|269203811|ref|YP_003283080.1| hypothetical protein SAAV_2239 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895244|ref|ZP_06303459.1| hypothetical protein SGAG_02579 [Staphylococcus aureus A8117]
 gi|282929326|ref|ZP_06336895.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295407642|ref|ZP_06817432.1| hypothetical protein SMAG_02813 [Staphylococcus aureus A8819]
 gi|296275834|ref|ZP_06858341.1| hypothetical protein SauraMR_05782 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246640|ref|ZP_06930469.1| hypothetical protein SLAG_02704 [Staphylococcus aureus A8796]
 gi|13701978|dbj|BAB43270.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247951|dbj|BAB58340.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147741692|gb|ABQ49990.1| alanine racemase domain protein [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947140|gb|ABR53076.1| alanine racemase domain protein [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722628|dbj|BAF79045.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253727635|gb|EES96364.1| amino acid racemase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257787354|gb|EEV25694.1| alanine racemase [Staphylococcus aureus A9781]
 gi|257841402|gb|EEV65844.1| alanine racemase [Staphylococcus aureus A9763]
 gi|257844078|gb|EEV68467.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A9719]
 gi|257847697|gb|EEV71695.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A9299]
 gi|257852091|gb|EEV76022.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854788|gb|EEV77736.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A6300]
 gi|257857524|gb|EEV80420.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A6224]
 gi|257862677|gb|EEV85445.1| alanine racemase domain-containing protein [Staphylococcus aureus
           A5937]
 gi|262076101|gb|ACY12074.1| hypothetical protein SAAV_2239 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589094|gb|EFB94194.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282762395|gb|EFC02540.1| hypothetical protein SGAG_02579 [Staphylococcus aureus A8117]
 gi|285817840|gb|ADC38327.1| Hypothetical protein SA2981_2116 [Staphylococcus aureus 04-02981]
 gi|294967501|gb|EFG43540.1| hypothetical protein SMAG_02813 [Staphylococcus aureus A8819]
 gi|297176500|gb|EFH35767.1| hypothetical protein SLAG_02704 [Staphylococcus aureus A8796]
 gi|312830526|emb|CBX35368.1| alanine racemase, N-terminal domain protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129747|gb|EFT85738.1| hypothetical protein CGSSa03_09560 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329728008|gb|EGG64454.1| alanine racemase, N-terminal domain protein [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 356

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNIQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|150007967|ref|YP_001302710.1| D-threonine aldolase [Parabacteroides distasonis ATCC 8503]
 gi|256840860|ref|ZP_05546368.1| D-threonine aldolase [Parabacteroides sp. D13]
 gi|298376682|ref|ZP_06986637.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Bacteroides
           sp. 3_1_19]
 gi|149936391|gb|ABR43088.1| D-threonine aldolase, metal-activated pyridoxal enzyme
           [Parabacteroides distasonis ATCC 8503]
 gi|256738132|gb|EEU51458.1| D-threonine aldolase [Parabacteroides sp. D13]
 gi|298266560|gb|EFI08218.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Bacteroides
           sp. 3_1_19]
          Length = 367

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 19/152 (12%)

Query: 10  KIDLTALKN-------NWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +ID  AL         N      + G+  R    VK N       +++  L +AG++ F 
Sbjct: 12  RIDSPALAFYPDRISGNIELAKRIIGDTNRLRPHVKTN----KAAEVSRMLLDAGIRKFK 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEK-------IIFDTNLIPVISSVPQLTFYSK 114
             ++ E   L        +     + P   +                V  +       + 
Sbjct: 68  CATIAEAEMLGHMNAPDVLLAYQPVGPKISRLLDLIKAYPATHYSCLVDQAENARAISAL 127

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
             +  ++    + ++ G NR G+  + A    
Sbjct: 128 CEAGNITLDVFIDLNVGMNRTGVLPERAEALV 159


>gi|255013342|ref|ZP_05285468.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Bacteroides
           sp. 2_1_7]
          Length = 367

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 19/152 (12%)

Query: 10  KIDLTALKN-------NWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           +ID  AL         N      + G+  R    VK N       +++  L +AG++ F 
Sbjct: 12  RIDSPALAFYPDRISGNIELAKRIIGDTNRLRPHVKTN----KAAEVSRMLLDAGIRKFK 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEK-------IIFDTNLIPVISSVPQLTFYSK 114
             ++ E   L        +     + P   +                V  +       + 
Sbjct: 68  CATIAEAEMLGHMNAPDVLLAYQPVGPKISRLLDLIKAYPATHYSCLVDQAENARAISAL 127

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFT 146
             +  ++    + ++ G NR G+  + A    
Sbjct: 128 CEAGNITLDVFIDLNVGMNRTGVLPERAEALV 159


>gi|70725863|ref|YP_252777.1| hypothetical protein SH0862 [Staphylococcus haemolyticus JCSC1435]
 gi|68446587|dbj|BAE04171.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 355

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 107/335 (31%), Gaps = 28/335 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             ++ I+L+ ++ N  ++  L  + +     V+K  A   G  +I   L  +G   F  +
Sbjct: 1   MAQININLSKIEYNADALRTLLENNDIHLTPVIKCIA---GDSRIIETLIQSGFTHFAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +E   +   +  Q    +L      +   +  +  + + + +  +   + +       H
Sbjct: 58  RLENINE--DFKGQCNYLLLRPTSKNRYTQLIKSVKMSMQTEIESIREINDIAKQLNQKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L +D    R G+   + L++          QL  I  +  C      +  + +++ +
Sbjct: 116 QIMLMIDWKDRREGVITYDVLNYIEEIIKMTHIQLIGIAFNFMCFKSSAPTEEDILKINQ 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F   I +  G    + S     + P   +                         +     
Sbjct: 176 FVDAIEYNLGFRLKVVSGGNSSMIPQLMYN-----------------DLGRINELRIGEA 218

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
           +         + +    Q  +T ++ I       +D     L  +         +     
Sbjct: 219 LFRGIDTTTNQSIPMLFQNAITVEAEILEIKPRLSDNNQCYLQAIVDIGYVDTDVNKIKP 278

Query: 302 IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI 336
           IK   V I+G  + D  M ++ +    +VGD I+ 
Sbjct: 279 IKND-VSIVGASS-DHLMINLNNQDYYKVGDIIEF 311


>gi|167646643|ref|YP_001684306.1| alanine racemase domain-containing protein [Caulobacter sp. K31]
 gi|167349073|gb|ABZ71808.1| alanine racemase domain protein [Caulobacter sp. K31]
          Length = 383

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 18/69 (26%), Gaps = 6/69 (8%)

Query: 9  LKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L ID  AL+ N   M   +     +     K          IA     AG        + 
Sbjct: 25 LVIDRPALERNIARMARFAADKGVKLRPHAKT----HKSVDIAKLQVAAGAVGLCCAKIG 80

Query: 67 EGVKLRLYT 75
          E   L    
Sbjct: 81 EAEALAEGG 89


>gi|331694412|ref|YP_004330651.1| alanine racemase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326949101|gb|AEA22798.1| alanine racemase domain protein [Pseudonocardia dioxanivorans
           CB1190]
          Length = 374

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 44/142 (30%), Gaps = 10/142 (7%)

Query: 11  IDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +DL  L  N       +  A  R    VK         +IA     AG     V +V E 
Sbjct: 31  VDLDVLTRNLDRAAEHARAAGLRLRPHVKT----HKSPEIARRQVEAGAVGLTVATVSEA 86

Query: 69  VKLRLYTPQ----ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                        A      G    + + +     + V    P+   +  L   G     
Sbjct: 87  EIFCRAGATDLFVAYPVWAAGPRGARLRALAQRVDLRVGVDSPEAARHLGLALAGTGASV 146

Query: 125 ALQVDTGFNRLGLSLQEALDFT 146
            +++D+G  R G++ + A +  
Sbjct: 147 LVEIDSGMRRSGVAPERAPEVA 168


>gi|290959027|ref|YP_003490209.1| hypothetical protein SCAB_46061 [Streptomyces scabiei 87.22]
 gi|260648553|emb|CBG71664.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 343

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 85/298 (28%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G EK+A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHEKLAEEATRLGSDILAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL      +E +     +I  +SSV  +          V     ++V +
Sbjct: 65  IKDW-FSGDLLVLTPYRRAEEPVPLPDRVIRSVSSVDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S QE           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGVSEQELPQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKSEDLIRLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   G+   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVAKGDRFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|256824351|ref|YP_003148311.1| amino acid aldolase or racemase [Kytococcus sedentarius DSM 20547]
 gi|256687744|gb|ACV05546.1| predicted amino acid aldolase or racemase [Kytococcus sedentarius
           DSM 20547]
          Length = 371

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 77/305 (25%), Gaps = 47/305 (15%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             +D   L+ N   +  L+         +A+T            C +IA     AG    
Sbjct: 14  AVVDRDRLQANIDRVARLAADRGQALRPHAKT----------HKCPQIAALQLEAGASGL 63

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI-----SSVPQLTFYSKL 115
            V ++ E            +                     V       SV  +   + L
Sbjct: 64  TVATLGEAEVFADAGCTDLLIAYPVWWDADRAGRVAQLAARVRLAVGVDSVEAVQHLASL 123

Query: 116 MSCGVSHP------------YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISH 163
           +      P              ++VD G +R G + Q+A                +    
Sbjct: 124 LGTAPGRPLAAPISPPTLPELVVEVDCGHHRSGCAPQDAGAVARAGLEAGFVVRGVFAFP 183

Query: 164 LACADDPSSHVNSVQLERFRTLISHYKG----IEASLASSS-GILLGPNYHFQLTRPGIS 218
                       + Q  R   + +        +E  ++  S   +      F   RPG+ 
Sbjct: 184 GHSYTPTGREEVAEQEARDLAVAADSLRGAGILEPWVSGGSTPTVEHEGDGFDEVRPGVY 243

Query: 219 LYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADG 278
           + G  D         +       +     + AG  +      K      +     G+A G
Sbjct: 244 VVG--DAQQWELGTCSSADVALTVHATVVSHAGGRLVLDAGSKA-----LGADRAGWATG 296

Query: 279 YPLTL 283
           +   L
Sbjct: 297 FGRLL 301


>gi|21222310|ref|NP_628089.1| hypothetical protein SCO3903 [Streptomyces coelicolor A3(2)]
 gi|256786589|ref|ZP_05525020.1| hypothetical protein SlivT_19041 [Streptomyces lividans TK24]
 gi|289770481|ref|ZP_06529859.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|4808399|emb|CAB42731.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289700680|gb|EFD68109.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 343

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 85/298 (28%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++       + VL     G+E +     ++  +SS+  +          V     ++V +
Sbjct: 65  IKD-FFGGDLLVLTPYRRGEEPVPLPDRVVRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGISEQDLPQL---HAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKADELARLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   GE   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVAKGERFGYRQQKAAS-DGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|261884739|ref|ZP_06008778.1| alanine racemase [Campylobacter fetus subsp. venerealis str.
          Azul-94]
          Length = 96

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 6  FLRLKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
            ++ +  TA  +N   +++  G+  R  +V+KD+AYG G   +A     +G++ 
Sbjct: 1  MSKIVLSKTAYIHNLTQISSQIGSKDRIISVLKDDAYGHGTGLMARISSGSGIKW 55


>gi|297193319|ref|ZP_06910717.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718363|gb|EDY62271.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 343

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 80/277 (28%), Gaps = 33/277 (11%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E+++      G     V +  E  +++ +     + VL     G+E
Sbjct: 26  LVPVCKGNGYGFGHERLSEEASRFGADMLAVGTTYEAARIKDW-FSGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     ++  +SSV         +   V     ++  +   R G+S Q+          
Sbjct: 85  PVPLPDRVVRSVSSV-------DGVHALVGARVVIECMSSMKRHGISEQDLGQL---HAA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
            +  +L     HL       S      +     L +    +     S             
Sbjct: 135 IEDVRLEGFALHLPLDRTDGSDAVEEVIGWMDRLRAARLPLHTMFVSHLRAQEQARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  +                 ++ + +   G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHESTE----------YRGAVLDVTRVSRGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
           D  + V A G + G     P  L G+          G
Sbjct: 244 DGWLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|284164081|ref|YP_003402360.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511]
 gi|284013736|gb|ADB59687.1| diaminopimelate decarboxylase [Haloterrigena turkmenica DSM 5511]
          Length = 466

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 30/100 (30%), Gaps = 13/100 (13%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE---- 67
           DL  ++ N+  + +   +A     VK NA     +++   L+  G       S  E    
Sbjct: 36  DLERVRENYRRLASAFPDAEIMYAVKANA----LDEVLETLHEEGA-GLECASAGEVKRA 90

Query: 68  --GVKL--RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI 103
              ++   R     A +       P ++            
Sbjct: 91  LAAIESSDRSDGSGADVHYTAVNPPARDLDWVVDAWEDHP 130


>gi|307329994|ref|ZP_07609146.1| alanine racemase domain protein [Streptomyces violaceusniger Tu
           4113]
 gi|306884370|gb|EFN15404.1| alanine racemase domain protein [Streptomyces violaceusniger Tu
           4113]
          Length = 343

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 82/287 (28%), Gaps = 36/287 (12%)

Query: 22  SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF 81
            +    G      V K N YG G E++A      G     V +  E  +++       + 
Sbjct: 19  VIQQFPG---IVPVCKGNGYGFGHERLAEEAARMGSDVLAVGTTYEAARMKD-FFSGDLL 74

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQE 141
           VL     G+E +     +I  +SSV  +          V+    ++V +   R G++ Q+
Sbjct: 75  VLTPFRRGEEPVPLPDRVIRSVSSVDGVYGL-------VNARVVIEVMSSMKRHGITEQD 127

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-- 199
                      +  +L     HL              +     L +    +     S   
Sbjct: 128 LPKL---HAAIENVRLEGFAIHLPLDRTDGLDAVEEVIAWMDRLRAARLPLHTMFVSHLK 184

Query: 200 -----SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELV 254
                      P   F+         G  D                 ++ + +   G+  
Sbjct: 185 AEELARLQQQFPQTRFRARIGTRLWLGDHDSTE----------YRGSVLDVTRVAKGDRF 234

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 235 GYRQQKSAS-DGHLVVVAGGTSHGVGLEAPKALHGMMPRAKGVARAG 280


>gi|254384799|ref|ZP_05000136.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343681|gb|EDX24647.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 343

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 83/298 (27%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++       G     V +  E   
Sbjct: 7   VDTARWRAHQKQIQDQFPG--LIPVCKGNGYGFGHERLCEEATRMGADILAVGTTYEAAS 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SSV  +          V     ++  +
Sbjct: 65  IKDW-FGGDLLVLTPFRRGEEPVPLPDRVIRSVSSVDGVRGL-------VGARVVIECMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMRRHGISEQDLGLL---HSAIEDVRLEGFALHLPLDRPDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKAQELTRLQQQFPQTRFRARIGTRLWLGDHEAT----------QYRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   G+   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVSKGDRFGYRQQKAAS-DGWLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|82751776|ref|YP_417517.1| hypothetical protein SAB2059c [Staphylococcus aureus RF122]
 gi|82657307|emb|CAI81748.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 356

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|21283833|ref|NP_646921.1| hypothetical protein MW2104 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486967|ref|YP_044188.1| hypothetical protein SAS2079 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297210001|ref|ZP_06926397.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300911012|ref|ZP_07128462.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21205275|dbj|BAB95969.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245410|emb|CAG43887.1| hypothetical protein SAS2079 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296885674|gb|EFH24611.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300887992|gb|EFK83187.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 356

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|329730285|gb|EGG66675.1| alanine racemase, N-terminal domain protein [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 356

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|253729849|ref|ZP_04864014.1| amino acid racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253726296|gb|EES95025.1| amino acid racemase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 356

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDILDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|282917526|ref|ZP_06325278.1| hypothetical protein SATG_02098 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283767276|ref|ZP_06340191.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus H19]
 gi|282318488|gb|EFB48846.1| hypothetical protein SATG_02098 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283461155|gb|EFC08239.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus H19]
          Length = 356

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|224477166|ref|YP_002634772.1| hypothetical protein Sca_1681 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421773|emb|CAL28587.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 356

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 104/361 (28%), Gaps = 40/361 (11%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+IDL  ++ N   +             V+K  A   G   I  AL   G+      
Sbjct: 2   MAYLEIDLAKIQYNTLMLKHKLEQRGLDITPVIKCIA---GDRTIVEALKQLGIHHVGDA 58

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 KL      + + +        ++ +   ++                 S    H 
Sbjct: 59  RFSNMDKLDDE-DLSFMMIRTPNRRELKETVLKVSISIQTEIETIRRINEIAASLDKKHK 117

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLERF 182
             L VD   +R G+   +  ++ +   + K   L+ +  +  C  D   +  + + + +F
Sbjct: 118 ILLMVDWKDSREGILTYDIPEYINEIMHMKYICLAGLAFNFMCFQDIAPTEEDILLINQF 177

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLT------RPGISLYGGTDKINKSHPMQTVV 236
              +    G    + S       P   +         R G SL+ G + +++  P+  + 
Sbjct: 178 IQSVEKKTGYPLKMISGGNSSALPLLDYCTFGRINDLRIGESLFRGVNTVDQQ-PIHYLF 236

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
                +      +   + +      L     I        D +P                
Sbjct: 237 QDAITLKAEIIEIKPRIDTVKDASYLQVILDIGQIDTAIKDIFP---------------- 280

Query: 297 GGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQI-FGPDIKLDDVALASGTTNY 355
                       I+G  + D  M D+ +S   +VGD I    G       +     T  +
Sbjct: 281 ----MYDNVR--IMGATS-DHLMVDLKNSDFHKVGDMITFKLGYQALAHSM--YQDTIPH 331

Query: 356 D 356
           +
Sbjct: 332 E 332


>gi|298695444|gb|ADI98666.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 356

 Score = 48.5 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|57652195|ref|YP_186980.1| hypothetical protein SACOL2168 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161431|ref|YP_494774.1| hypothetical protein SAUSA300_2137 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196087|ref|YP_500902.1| hypothetical protein SAOUHSC_02433 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151222291|ref|YP_001333113.1| hypothetical protein NWMN_2079 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161510385|ref|YP_001576044.1| hypothetical protein USA300HOU_2170 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142602|ref|ZP_03567095.1| hypothetical protein SauraJ_13337 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|258450860|ref|ZP_05698917.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262050295|ref|ZP_06023142.1| hypothetical protein SAD30_1178 [Staphylococcus aureus D30]
 gi|262053059|ref|ZP_06025233.1| hypothetical protein SA930_1982 [Staphylococcus aureus 930918-3]
 gi|282926948|ref|ZP_06334574.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|284025208|ref|ZP_06379606.1| hypothetical protein Saura13_11502 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850640|ref|ZP_06791364.1| hypothetical protein SKAG_02737 [Staphylococcus aureus A9754]
 gi|304379362|ref|ZP_07362098.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|57286381|gb|AAW38475.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127405|gb|ABD21919.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203645|gb|ABD31455.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150375091|dbj|BAF68351.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160369194|gb|ABX30165.1| hypothetical protein USA300HOU_2170 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|257861454|gb|EEV84258.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259159055|gb|EEW44125.1| hypothetical protein SA930_1982 [Staphylococcus aureus 930918-3]
 gi|259161619|gb|EEW46214.1| hypothetical protein SAD30_1178 [Staphylococcus aureus D30]
 gi|269941773|emb|CBI50181.1| hypothetical protein SATW20_23130 [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592128|gb|EFB97151.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|294822511|gb|EFG38956.1| hypothetical protein SKAG_02737 [Staphylococcus aureus A9754]
 gi|302752053|gb|ADL66230.1| alanine racemase [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304342068|gb|EFM07971.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|315195970|gb|EFU26332.1| hypothetical protein CGSSa01_06929 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320139439|gb|EFW31316.1| alanine racemase protein [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320142482|gb|EFW34292.1| alanine racemase protein [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314861|gb|AEB89274.1| Alanine racemase [Staphylococcus aureus subsp. aureus T0131]
 gi|329731370|gb|EGG67735.1| alanine racemase, N-terminal domain protein [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 356

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|206901254|ref|YP_002251767.1| amino acid racemase [Dictyoglomus thermophilum H-6-12]
 gi|206740357|gb|ACI19415.1| amino acid racemase [Dictyoglomus thermophilum H-6-12]
          Length = 362

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 100/353 (28%), Gaps = 41/353 (11%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYG----------LGCEKIAP 50
           M +     L+I+L A+ +N   +           V K   YG          LG  KIA 
Sbjct: 1   MDNICSPYLEINLPAIYHNAKII-----------VEKGRDYGILIDGVTKVSLGDPKIAE 49

Query: 51  ALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT 110
            L  AGV     + +E   +++         ++      Q +       I + S +  L 
Sbjct: 50  VLVEAGVFGISDSRIESIKRMKESNLNTNFTLIRLPCLSQVEEEIKYADISLNSELSTLR 109

Query: 111 FYSK-LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD 169
             ++        H   + V+ G  R G+  +E L F      K        +        
Sbjct: 110 ALNEAGEKLKKKHRVVIMVEMGDIREGIWNREELYFVVREVLKMKNLELFGVGTNFTCFG 169

Query: 170 PSSHVNSVQLERFRT---LISHYKGIEASLASSSGILLGP-------NYHFQLTRPGISL 219
                   +   F      +     I  ++ S       P              R G  +
Sbjct: 170 GVIP-TEEKYMDFIEIVDDLKRKFNISFAIVSGGNSSTIPLLFKGKIPLGVNHLRIGEGI 228

Query: 220 YGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
             G +   +             I  I +      V +G       D+     +       
Sbjct: 229 MLGRETAYRKVIPGARTDTFRFIGEILEVKEKPSVPWGVIG---EDAFGHKPSFKARGVR 285

Query: 280 PLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGD 332
              +     +      +  +       V +LG  + D T+ DI++   ++VGD
Sbjct: 286 KRAILNFGRQDIDPEGIKPEIL----GVEVLGATS-DYTVVDISERDDLKVGD 333


>gi|320009727|gb|ADW04577.1| alanine racemase domain protein [Streptomyces flavogriseus ATCC
           33331]
          Length = 343

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 80/277 (28%), Gaps = 33/277 (11%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E++A      G     V +  E  +++ +     + VL     G+E
Sbjct: 26  LVPVCKGNGYGFGHERLADEAIRFGSDILAVGTTYEAARIKDW-FSGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     +I  +SSV         +   V     ++  +   R G+  +E          
Sbjct: 85  PVPLPDRVIRSVSSV-------DGVHALVGARVVIECMSSMKRHGVKEEELGQL---HAA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
            +  +L     HL       S      +     L +    +     S             
Sbjct: 135 IEDVRLEGFALHLPLDRTDGSDAVEEVIAWMDRLRAARLPLHTMFVSHLRAEELARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  +                 ++ + + + G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHEATE----------YRGAVLDVTRVVKGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
           D  + V A G + G     P  L G+          G
Sbjct: 244 DGWLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|269792447|ref|YP_003317351.1| alanine racemase domain-containing protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100082|gb|ACZ19069.1| alanine racemase domain protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 364

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 56/158 (35%), Gaps = 8/158 (5%)

Query: 13  LTALKNNWHSMNALSG--NARTAAVVKDNAYGL-GCEKIAPALYNAGVQDFFVTSVEEGV 69
           L  ++ N   + +L+G        V K    GL G   +A A+ + G +    + V    
Sbjct: 11  LETVRFNASQVASLAGRVGVSIWGVTK----GLCGEPSLARAMVDGGCEAIGDSRVRNLA 66

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-KLMSCGVSHPYALQV 128
            ++     A ++++      +   + +     ++SS+  L        +        L  
Sbjct: 67  HMKAAGVDAPMYLIRIPMLSEIPWMLEVADGCLVSSLETLEVIEGHCAAQRRVFQVVLMF 126

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
           D G  R G   Q A D      +    ++  + ++L C
Sbjct: 127 DLGDLREGFMPQMAEDVGRFCSSLSWVRVIGVGTNLGC 164


>gi|194335990|ref|YP_002017784.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme
          BU-1]
 gi|194308467|gb|ACF43167.1| Orn/DAP/Arg decarboxylase 2 [Pelodictyon phaeoclathratiforme
          BU-1]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
          +D   L+ N+          +    VK N+     ++I    Y+AG   F V S+ E + 
Sbjct: 20 VDHEVLRANYREFKRHLPRVQAYFAVKANS----AKEIVKTFYDAGAS-FDVASMPEFLA 74

Query: 71 L 71
          +
Sbjct: 75 V 75


>gi|219853015|ref|YP_002467447.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c]
 gi|219547274|gb|ACL17724.1| Orn/DAP/Arg decarboxylase 2 [Methanosphaerula palustris E1-9c]
          Length = 404

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 5/57 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          ID   ++ N+        + +    VK N+      +I   L++ G   F V S+ E
Sbjct: 46 IDHEKIRQNYREFREHLPDVQVYFAVKANSN----PEIVKTLFDMGCS-FDVASMPE 97


>gi|312144490|ref|YP_003995936.1| alanine racemase domain protein [Halanaerobium sp. 'sapolanicus']
 gi|311905141|gb|ADQ15582.1| alanine racemase domain protein [Halanaerobium sp. 'sapolanicus']
          Length = 357

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/344 (17%), Positives = 108/344 (31%), Gaps = 23/344 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +F  + I L  ++ N   M A+    N    AVVK  A   G  K+      A +     
Sbjct: 2   DFPVIDIYLNKIEENALQMKAMLNDNNINLTAVVKGFA---GDLKVFNCFQKAAINSIAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV-PQLTFYSKLMSCGVS 121
           + ++   K R    Q  I +L      + +         +IS +          +     
Sbjct: 59  SRLQNIKKYRAAGYQGEIMMLRIPMCSELEEAVKYIDTTLISEIETARAAAKAAVKLNKE 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLE 180
               + VD G  R G+  +   +           +L  I ++L C A       N+ +L 
Sbjct: 119 IKVIIMVDLGDRREGVLAENLKELAAEIIKLDGLKLDGIGTNLGCFAGVLPDEKNTKELI 178

Query: 181 RFRTLISHYKGIEAS---LASSSGILLGPN----YHFQLTRPGISLYGGTDKINKSHPMQ 233
           +++  +     I+ +     +++  +L  N          R G  +  GTD IN+     
Sbjct: 179 KYKKELEKEFSIKINRISAGNTATTILLNNNELSSSINNLRIGEGILLGTDIINERLFNN 238

Query: 234 TVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPS 293
                      I +  A      G      +     +   G         +         
Sbjct: 239 LNHYNFRLRAEIIELKAKPSNPEGEMAFGGKGRNQILKDQGL-----RQRAIAAVGKQDI 293

Query: 294 VFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQI 336
            + G     KG    +LG  + D  + D+TD    I VGD +  
Sbjct: 294 DYHGLYPLDKGI--EVLGASS-DHLIMDVTDLKRKIAVGDILTF 334


>gi|163858331|ref|YP_001632629.1| hypothetical protein Bpet4013 [Bordetella petrii DSM 12804]
 gi|163262059|emb|CAP44361.1| conserved hypothetical protein [Bordetella petrii]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 13/173 (7%)

Query: 9   LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             ID+  ++ N   M              VK       C  +A A   AG +   V++++
Sbjct: 16  AIIDVARMQANIDRMQQRMNTLGVALRPHVKT----SKCTPVAQAQLAAGARGITVSTLK 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL------IPVISSVPQLTFYSKLMSCGV 120
           E  +       A I    G+ P +               I   ++       +     G 
Sbjct: 72  EAEQFFEAGI-ADILYAVGMVPQRLPAALALRRRGCDLKIITDNAAAARAIAAFGREHGE 130

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                +++DT  +R G+   EA      +   + G     +   A +      
Sbjct: 131 VFEVWIEIDTDGHRSGIKPGEAALLEVGAALHEGGMTLGGVMTHAGSSYDLDT 183


>gi|217966665|ref|YP_002352171.1| alanine racemase domain protein [Dictyoglomus turgidum DSM 6724]
 gi|217335764|gb|ACK41557.1| alanine racemase domain protein [Dictyoglomus turgidum DSM 6724]
          Length = 361

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 99/337 (29%), Gaps = 25/337 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L+I+L A+ +N   +             V K +   LG  KIA  L  AGV     + +E
Sbjct: 8   LEINLPAIYHNAKVIVEKGKEQGILIDGVTKVS---LGDPKIARVLVKAGVFGISDSRIE 64

Query: 67  EGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
              +++          +        E+ I   ++      +               H   
Sbjct: 65  SIKRMKEDGLDTQFTLIRLPCLSQVEEEIKYADVSLNSEFITLKALNEAGERLKKKHKVI 124

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + V+ G  R G+  +E L F      K        I                +   F  +
Sbjct: 125 IMVEMGDIREGIWNKEELYFVIGEVLKMENLELWGIGTNFTCFGGVIP-TEEKYISFLEI 183

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
           +     +E     S  ++ G N     +   +   G          +   +         
Sbjct: 184 VRD---LEKRFNISFPMVSGGNS----SSISLLFEGKIPSGINHLRIGEGIMLGRETSYR 236

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGY--ADGYP-------LTLSGLDSEHSPSVFL 296
           +  L     ++    ++           G    D +          +      +     +
Sbjct: 237 KPVLGARTDTFKFVGEILEIKEKPSIPWGIIGEDAFGHKPSFKVRGIRKRALLNFGRQDI 296

Query: 297 GGKGFIKGYM-VPILGKITMDMTMFDITDSLSIEVGD 332
             +G I     + ILG  + D T+ DI+++ S++VGD
Sbjct: 297 DPEGLIPETFGIEILGATS-DYTVVDISENDSLKVGD 332


>gi|283471407|emb|CAQ50618.1| alanine racemase, N-domain family [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 356

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
            ++  + +          +L      +   + +   + + + +  +   +++    G  H
Sbjct: 58  RLDNIISI--ADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHHINEVAEVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|29830835|ref|NP_825469.1| hypothetical protein SAV_4292 [Streptomyces avermitilis MA-4680]
 gi|29607948|dbj|BAC72004.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 343

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 86/298 (28%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++A      G     V +  E  +
Sbjct: 7   VDTARWRAHHKHVQEQFPG--LVPVCKGNGYGFGHERLADEATRLGSDVLAVGTTYEAAR 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G+E +     +I  +SS+  +          V     ++V +
Sbjct: 65  IKDW-FGGDLLVLTPFRRGEEPVPLPDRVIRSVSSIDGVYGL-------VGARVVIEVMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMKRHGVSEQDLPHL---HSAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  +                 ++
Sbjct: 174 PLHTMFVSHLKAEELARLQQQFPQTRFRARIGTRLWLGDHEATE----------YRGAVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   G+   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVSKGDRFGYRQQKAAS-DGYLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|49484398|ref|YP_041622.1| hypothetical protein SAR2269 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257423669|ref|ZP_05600098.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257426346|ref|ZP_05602748.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257428988|ref|ZP_05605375.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257431634|ref|ZP_05607997.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257434593|ref|ZP_05610644.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282902084|ref|ZP_06309977.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282906526|ref|ZP_06314374.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282909492|ref|ZP_06317305.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282915031|ref|ZP_06322808.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282920758|ref|ZP_06328476.1| hypothetical protein SASG_00939 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282925663|ref|ZP_06333311.1| hypothetical protein SARG_00990 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283958956|ref|ZP_06376399.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293497440|ref|ZP_06665294.1| hypothetical protein SCAG_00013 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293511011|ref|ZP_06669708.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus M809]
 gi|293549617|ref|ZP_06672289.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295428766|ref|ZP_06821390.1| hypothetical protein SIAG_02004 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297589749|ref|ZP_06948390.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49242527|emb|CAG41247.1| hypothetical protein SAR2269 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257272687|gb|EEV04789.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257275977|gb|EEV07428.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257279469|gb|EEV10056.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282513|gb|EEV12645.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285189|gb|EEV15305.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus M876]
 gi|282312492|gb|EFB42896.1| hypothetical protein SARG_00990 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282315173|gb|EFB45557.1| hypothetical protein SASG_00939 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282320752|gb|EFB51086.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282326602|gb|EFB56902.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282329425|gb|EFB58946.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282596543|gb|EFC01502.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           C160]
 gi|283789515|gb|EFC28340.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290918664|gb|EFD95740.1| putative amino acid racemase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096371|gb|EFE26629.1| hypothetical protein SCAG_00013 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291465998|gb|EFF08527.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus M809]
 gi|295127115|gb|EFG56757.1| hypothetical protein SIAG_02004 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297578260|gb|EFH96973.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MN8]
 gi|315193109|gb|EFU23509.1| hypothetical protein CGSSa00_09322 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 356

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 72/210 (34%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNIQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
            ++  + +          +L      +   + +   + + + +  +   +++    G  H
Sbjct: 58  RLDNIISM--ADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHHINEVAEVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|300718462|ref|YP_003743265.1| alanine racemase [Erwinia billingiae Eb661]
 gi|299064298|emb|CAX61418.1| Alanine racemase [Erwinia billingiae Eb661]
          Length = 386

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 56/206 (27%), Gaps = 21/206 (10%)

Query: 9   LKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++ID   L  N   M   +  GN R    VK          IA      G     V+   
Sbjct: 27  IEIDAQRLTRNLQQMQQRAATGNVRLRPHVKT----HKSVAIAQQQIALGAVGITVSKPS 82

Query: 67  EGVKLRLYTPQARIFVLYGIHPG--------QEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           EGV       +  +     +                    +I    +       +     
Sbjct: 83  EGVVFINGGVRDVLLAYPVVQAESVSALFAVAASSGCKLGVIVASQAGVAAIAQAAAAVT 142

Query: 119 GVSHPYALQVDTGFNRLGLSLQ--EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
            +     ++VD G  R+G++ +  EAL   H      L         ++ A       N 
Sbjct: 143 SLDLSVWIKVDVGLGRVGVNPEGDEALQLAHAVQAAGL----HFAGLVSHAGHAYGAQNP 198

Query: 177 VQLERFRTLISHYK-GIEASLASSSG 201
            Q+       +    G+   L  +  
Sbjct: 199 QQMAAIVQAEAQCMQGLRQRLHQAGF 224


>gi|118444569|ref|YP_878187.1| amino acid racemase [Clostridium novyi NT]
 gi|118135025|gb|ABK62069.1| amino acid racemase [Clostridium novyi NT]
          Length = 368

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 12/141 (8%)

Query: 5   EFLRLKIDLTALKNN----WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            + RL+I+++ LK+N      ++  +        V K      G  + A A+ + G++  
Sbjct: 2   SYPRLEINISKLKHNAKVEVETLKKI--GVEVMGVNKVF---NGSVETAKAIVDGGIKVV 56

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCG 119
             + ++   K++    +    +L      +   +     I + S +  +   SK      
Sbjct: 57  AESRIDNLKKIQNL--KCEKALLRSPALSEIGDVVKYADISLNSEIEIIRELSKEAVIQN 114

Query: 120 VSHPYALQVDTGFNRLGLSLQ 140
             H   L +D G  R G+  +
Sbjct: 115 KIHKVLLMIDFGDIREGIWFE 135


>gi|254513241|ref|ZP_05125306.1| threonine aldolase family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221532245|gb|EEE35241.1| threonine aldolase family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 382

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 40/166 (24%), Gaps = 6/166 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +DL   K N      +  +        +K          IA     A    F V S+ 
Sbjct: 32  LLVDLPVFKQNIERAAQMVADTGKAFTPHLKA----HKTPDIAEMQCAASAAGFCVASIG 87

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E      Y           +   Q   I   +      +V   T  +      +    ++
Sbjct: 88  EAEVFAKYGDTPLTITSATVTGRQMARIAALSKQVSELTVVVDTPPNIRALANLDATVSV 147

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS 172
            +D    R   +  E     H +          +      A   S 
Sbjct: 148 LIDIDMGRGRSACTEEAQAVHLAREIMGAPNLNLAGLQCYAGQLSH 193


>gi|227432611|ref|ZP_03914589.1| conserved hypothetical protein [Leuconostoc mesenteroides subsp.
          cremoris ATCC 19254]
 gi|227351647|gb|EEJ41895.1| conserved hypothetical protein [Leuconostoc mesenteroides subsp.
          cremoris ATCC 19254]
          Length = 50

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 4  NEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLG 44
          +    +++  +A+ +N   +   +      AV+K NA+  G
Sbjct: 7  HRHAVIELSQSAVVHNLKVIKENTHAKEIMAVLKANAFSHG 47


>gi|326317869|ref|YP_004235541.1| alanine racemase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374705|gb|ADX46974.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 377

 Score = 47.4 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 49/179 (27%), Gaps = 29/179 (16%)

Query: 11  IDLTALKNNWHSMNA-----------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
           ID   ++ N   M              +   +   VV              A   AG Q 
Sbjct: 14  IDTQRMERNIRRMQDRMQAMGVRFRPHAKTTKCLPVV-------------QAQIAAGAQG 60

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSK 114
             V++++E  +      Q  ++ +  +          +       I   S          
Sbjct: 61  ITVSTLKEAEQFFEAGIQDILYAVGMVPGKLGQALALRQRGCQLKIITDSVAAAREIGRF 120

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             + G      +++DT  +R G+  +E       +  +  G +   +   A +      
Sbjct: 121 GAAHGAVFEVWIEIDTDGHRSGIKPEEDALLQVANVLRDAGMVVGGVLAHAGSSYDHDD 179


>gi|311032754|ref|ZP_07710844.1| alanine racemase domain protein [Bacillus sp. m3-13]
          Length = 390

 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 41/143 (28%), Gaps = 12/143 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L +D   L  N   M+  +   +      +K         +IA      G        
Sbjct: 11  PTLILDGQILLKNIRKMSDFAKENKVNLRPHIKT----HKSVEIAKLQLEHGAIGITTAK 66

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD------TNLIPVISSVPQLTFYSKLMSC 118
           +EE   +     +  +       P + + I           I V S          L   
Sbjct: 67  LEEAEVMAASGIKDILVAYPVSSPAKIERIIALLDQEVDLKITVDSLEQVKLLQKALEKT 126

Query: 119 GVSHPYALQVDTGFNRLGLSLQE 141
             S    ++V++G NR G+   E
Sbjct: 127 SHSLEVWIKVNSGLNRCGVEPGE 149


>gi|282911745|ref|ZP_06319541.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282323441|gb|EFB53757.1| alanine racemase domain-containing protein [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|312437404|gb|ADQ76475.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH60]
          Length = 356

 Score = 47.0 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 69/210 (32%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNIQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++  +   +     G  H
Sbjct: 58  RLDNIISMADQYLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHHINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|300814860|ref|ZP_07095094.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511056|gb|EFK38322.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 370

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +L  L++N  ++       N     V+K      G  +IA   Y+  V     + +E+  
Sbjct: 21  NLNKLRDNLAALTKRCQIYNVSIVGVIKGF---NGIAEIAKV-YDGKVDFIASSRLEQLN 76

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQV 128
            ++    Q  +  +    P +   +     I + S    +   ++     G+ H   L  
Sbjct: 77  VIKELNLQTPLMCIRISMPSEVDELVRICQISLQSDPSVIKLINEAAKKQGLIHKIVLMA 136

Query: 129 DTGFNRLGLSLQEALD 144
           D G  R G   ++ L 
Sbjct: 137 DIGDLREGFWNKDHLF 152


>gi|258424783|ref|ZP_05687658.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257845016|gb|EEV69055.1| conserved hypothetical protein [Staphylococcus aureus A9635]
          Length = 356

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  ++   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESIKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++  + +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|299533035|ref|ZP_07046422.1| alanine racemase-like protein [Comamonas testosteroni S44]
 gi|298719259|gb|EFI60229.1| alanine racemase-like protein [Comamonas testosteroni S44]
          Length = 394

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 22/77 (28%), Gaps = 18/77 (23%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L IDL A+  N   M   +         +A+                IA  L +AG    
Sbjct: 24 LVIDLDAMDRNIERMARFAQQHGVLWRPHAKL----------HKSAHIAHLLEHAGACGH 73

Query: 61 FVTSVEEGVKLRLYTPQ 77
           V  V E   L      
Sbjct: 74 CVQKVSEAEALAQGGIT 90


>gi|149180769|ref|ZP_01859272.1| Serine racemase [Bacillus sp. SG-1]
 gi|148851559|gb|EDL65706.1| Serine racemase [Bacillus sp. SG-1]
          Length = 365

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 12/141 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L +D   L  N + + + +     +    +K         +IA     AG       +
Sbjct: 10  PTLLLDYQKLMKNINEIASFAKEHSLSYRPHIKT----HKSVEIAKLQLQAGAIGITTAT 65

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD------TNLIPVISSVPQLTFYSKLMSC 118
           + E   +        +       P + K +           I V + V      ++L   
Sbjct: 66  IPEAEAMAAGGINDILIAYPIASPQKIKRLIALLEQDVKLKISVDNPVQLTHLQNELEHT 125

Query: 119 GVSHPYALQVDTGFNRLGLSL 139
             +    ++V++G NR G+  
Sbjct: 126 PFTLEVWIKVNSGLNRCGVEP 146


>gi|262066081|ref|ZP_06025693.1| amino acid racemase [Fusobacterium periodonticum ATCC 33693]
 gi|291380175|gb|EFE87693.1| amino acid racemase [Fusobacterium periodonticum ATCC 33693]
          Length = 355

 Score = 47.0 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 56/351 (15%), Positives = 103/351 (29%), Gaps = 38/351 (10%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGNART-AAVV-K---DNAYGLGCEKIAPALYNAG--VQ 58
           + RL+I++  LK N   ++ L        A+V K    N        I   L      V 
Sbjct: 2   YPRLEININKLKTNLQVISNLLKKNNLSLAMVTKAYCAN------VNIVTELVKDNNLVD 55

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-S 117
               + +E   K++         +L      + + +     I   S    L   +++   
Sbjct: 56  YLADSRIENLKKMKD--INIPKILLRIPMKSEVEEVVKYADISFNSEYETLEKLNEVAKK 113

Query: 118 CGVSHPYALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVN 175
               H   + VD G  R G  ++ + L+      +     +  + ++L C      S  N
Sbjct: 114 NNKIHKVVIMVDLGDLREGYFVEKDLLENIKKIHDLHNISIIGLATNLTCYGSVLPSEEN 173

Query: 176 SVQLERFRTLISHYKGIEASLASSS--------GILLGPNYHFQLTRPGISLYGGTDKIN 227
             +L      I     I+  + S               P+    L      L G      
Sbjct: 174 LSKLVNLAEKIEKNFHIKMQIISGGNSSSLFLLNENRLPSKINNLRVGEAILLGRETAYG 233

Query: 228 KSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYAD-GYPLTLSGL 286
           +          +   ++       E  S        R        + Y D G    +  +
Sbjct: 234 EDIDGTY---NDVFKLVCEVIENKEKPSVPI---GERGLDAFGNQVEYEDKGI---MQRV 284

Query: 287 DSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDS-LSIEVGDYIQI 336
                      G  F     + ++G  + D T+ D+T      +VGD I+ 
Sbjct: 285 IIGIGRQDISIGHFFPIDKKIEVVGASS-DHTILDVTHCVKKYQVGDLIEF 334


>gi|264680409|ref|YP_003280319.1| alanine racemase [Comamonas testosteroni CNB-2]
 gi|262210925|gb|ACY35023.1| alanine racemase-like protein [Comamonas testosteroni CNB-2]
          Length = 394

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 22/77 (28%), Gaps = 18/77 (23%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L IDL A+  N   M   +         +A+                IA  L +AG    
Sbjct: 24 LVIDLDAMDRNIERMARFAQQHGVLWRPHAKL----------HKSAHIAHLLEHAGACGH 73

Query: 61 FVTSVEEGVKLRLYTPQ 77
           V  V E   L      
Sbjct: 74 CVQKVSEAEALAQGGIT 90


>gi|308178610|ref|YP_003918016.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117]
 gi|307746073|emb|CBT77045.1| alanine racemase-like protein [Arthrobacter arilaitensis Re117]
          Length = 366

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 40/337 (11%)

Query: 7   LRLKIDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
            ++ +D+  L+ N   +          L  +A+T             ++IA    NAG  
Sbjct: 11  PQILVDVAKLEKNIDRVAHRVASQGLKLRPHAKT----------HKMQEIAERQMNAGAA 60

Query: 59  DFFVTSVEEGVKLRLYT-----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS 113
              V +V E +   L+          ++V         +++    L     SV  +   +
Sbjct: 61  GLTVATVGEALSFALHGVAKIFIAYPLWVDQAQATRILELMRRAKLSIGTDSVEAVEQMA 120

Query: 114 KLMSCGV-SHPYALQVDTGFNRLGLSLQEALDFTHNSFNK-KLGQLSLIISHLACADDPS 171
           K++   V      +++D+G +R G+S Q A++    +                + A +  
Sbjct: 121 KMLGEKVSKVKLIIEIDSGHHRSGVSPQGAVEIAEAARAVGMRVHGVFTFPGHSYAPEGI 180

Query: 172 SHVNSVQLERFRTLI-----SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
               + + +           + +     S  S+    L  N      RPG+ ++G   + 
Sbjct: 181 DAALNDEHKALAEAACLLRDAGHTIKRISGGSTPTAELSDNAVLTEVRPGVYVFGDAQQF 240

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGL 286
                    ++      +I +      +            L       +A GY       
Sbjct: 241 ELGRVRWEDISLTVASTVISRHEGDGQIPRRIVLDAGSKVLGGDRPA-WATGYGRIAECP 299

Query: 287 DSEHSPSVFLGGKGFI--------KGYMVPILGK-IT 314
           ++  S                    G  + ++   + 
Sbjct: 300 EARISALSEHHATVLWPEHLPLPAHGQQLQVIPNHVC 336


>gi|221064978|ref|ZP_03541083.1| alanine racemase domain protein [Comamonas testosteroni KF-1]
 gi|220710001|gb|EED65369.1| alanine racemase domain protein [Comamonas testosteroni KF-1]
          Length = 394

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 22/77 (28%), Gaps = 18/77 (23%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L IDL A+  N   M   +         +A+                IA  L +AG    
Sbjct: 24 LVIDLDAMDRNIERMARFAQQHGVLWRPHAKL----------HKSAHIAHLLEHAGACGH 73

Query: 61 FVTSVEEGVKLRLYTPQ 77
           V  V E   L      
Sbjct: 74 CVQKVSEAEALAQGGIT 90


>gi|282881806|ref|ZP_06290462.1| alanine racemase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
 gi|281298342|gb|EFA90782.1| alanine racemase domain-containing protein [Peptoniphilus
           lacrimalis 315-B]
          Length = 370

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           +L  L++N  ++       N     V+K      G  +IA   Y+  V     + +E+  
Sbjct: 21  NLNKLRDNLAALTERCQIYNVSIVGVIKGF---NGIAEIAKV-YDGKVDYIASSRLEQLN 76

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSHPYALQV 128
            ++    Q  +  +    P +   +     I + S    +   ++     G+ H   L  
Sbjct: 77  VIKELNLQTPLMCIRISMPSEVDELVRICQISLQSDPSVIKLINEAAKKQGIIHKIILMA 136

Query: 129 DTGFNRLGLSLQEALD 144
           D G  R G   ++ + 
Sbjct: 137 DIGDLREGFWNKDHIF 152


>gi|284041650|ref|YP_003391990.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
 gi|283945871|gb|ADB48615.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
          Length = 372

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +D   L+ N  +M AL+ +A  A     K         ++A    +AG     V  + 
Sbjct: 11 LVVDRDVLRANVEAMAALARDAGVALRPHAKT----HKLPQVARMQLDAGAAGLTVAKLG 66

Query: 67 EGVKLRLYTPQ 77
          E          
Sbjct: 67 EAEVFADAGVT 77


>gi|170078522|ref|YP_001735160.1| hypothetical protein SYNPCC7002_A1917 [Synechococcus sp. PCC 7002]
 gi|169886191|gb|ACA99904.1| conserved hypothetical protein TIGR00044 [Synechococcus sp. PCC
           7002]
          Length = 222

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 65/223 (29%), Gaps = 21/223 (9%)

Query: 14  TALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG---- 68
            A+  N   +   +    R  AV K         KI    Y AG++DF     +E     
Sbjct: 3   DAIAENIARLREEIPPEVRLIAVSKT----HSAAKI-RLAYAAGIRDFGENRFQEAQQKQ 57

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            +L    P  R   +  +   + K                L       +  + +P    +
Sbjct: 58  AELEDL-PDIRWHFIGHLQKNKAKKAITHFDWIHTVDSLALAQKLDQYAADLENPARCCL 116

Query: 129 DTG----FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS-VQLERFR 183
                   N+ G  + + L         +  +L  +++ L      +    +  Q+   +
Sbjct: 117 QIKPLPDPNKFGWEIPQLLSELPQLATCQHLKLQGLMTILPLGLSRTETRTAFKQIFSLK 176

Query: 184 TLISHYKGIEASLASSSGILLGP-----NYHFQLTRPGISLYG 221
             ++    +   L   S  + G           + R G  ++G
Sbjct: 177 EQLNQMASLPEQLTELSMGMSGDYPLAIEAGATMIRVGQGIFG 219


>gi|326424273|ref|NP_762625.2| putative amino acid racemase [Vibrio vulnificus CMCP6]
 gi|319999659|gb|AAO07615.2| Predicted amino acid racemase [Vibrio vulnificus CMCP6]
          Length = 360

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 6/165 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + +L +D   + +N   +       N     V K    G     IA  L +AG      
Sbjct: 2   RYPKLDLDCFKIHHNTQYLIERLALKNVSVTPVTKS-CLGH--PIIAQLLIDAGASTLAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVS 121
           + +E   ++          ++      Q   + +   I + + +  +   S++       
Sbjct: 59  SRIENIQRMVHSGITVPKMLIRTPMLSQTAKVVEYCDISLNTEIQVIQQLSRVAKQVNSK 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
           H   + V+ G  R G+     + F     +     +  I ++L C
Sbjct: 119 HGVIIMVELGDLREGVMPSRLIGFISEIISLPNIIIKGIGANLTC 163


>gi|309779212|ref|ZP_07673975.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA]
 gi|308922016|gb|EFP67650.1| alanine racemase, N- domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 53/170 (31%), Gaps = 11/170 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           IDL  +++N   M     +   +    VK       C  +  A   AG Q   V++++E 
Sbjct: 18  IDLPRMQHNIARMQHRMNALGVKFRPHVKT----TKCLDVVRAQVAAGAQGITVSTLKEA 73

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV-----ISSVPQLTFYSKLMSCGVSHP 123
                   +  ++ +  +     + +              ++           + G    
Sbjct: 74  EAFFAAGIKDILYAVGIVATKLPRAMALRKRGCDLKLVVDNAEAAHAVVDYARAHGERCE 133

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             ++VDT  +R G++ ++          K  G     +   A +    + 
Sbjct: 134 VWIEVDTDGHRSGITPEQDALLEVGRILKNGGIDVSGVMTHAGSSYDLND 183


>gi|154249371|ref|YP_001410196.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1]
 gi|154153307|gb|ABS60539.1| Orn/DAP/Arg decarboxylase 2 [Fervidobacterium nodosum Rt17-B1]
          Length = 393

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 87/291 (29%), Gaps = 18/291 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  + NN+  +     N +    VK N+      +I   L + G   F V S  E 
Sbjct: 16  LVMDLNVIANNYRQLIENINNCKVYYAVKSNS--H--IEIVKFLKDMG-SHFDVASRGEI 70

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KL     +             E I F   +   + +V       K+     +    +++
Sbjct: 71  EKLLSIGVEPSRMSFGNTIKKIEDIKFAYEVGIRMFAVDAEMEIEKIALVAPNADIYVRI 130

Query: 129 DTG----------FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            T             + G S+  A++    +  K L  + L     +   +P +   +++
Sbjct: 131 STNGMEGDADWPLTRKFGTSVNHAIELVRYAKEKGLNPIGLSFHVGSQNYNPENWRTAIR 190

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +   G+E  + ++ G +      +    P I              +   +T 
Sbjct: 191 EASIVFEEAKQFGVEMKMINTGGGMP---VRYVRDIPSIKKIAKVINEAVEEYLGNDITV 247

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
                      AG ++S    +    D        G   G   T+  +   
Sbjct: 248 IVEPGRSMVGNAGVMISRVILRSKKGDENWLYLDAGVFHGLTETIQNIRYR 298


>gi|317494188|ref|ZP_07952604.1| alanine racemase domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316917961|gb|EFV39304.1| alanine racemase domain-containing protein [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 367

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+IDL  L  N      +  +      AV K      GC + A A+ + G+     +
Sbjct: 3   MPTLEIDLKKLTENARVEKEMLAAHGIEVMAVNKVFD---GCIETAQAVLDGGINVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R       +     +   ++ + +    +     V Q          G  H 
Sbjct: 60  RTYNLKKIRATGCTTCLLRSPCLSEIEDVVRYADISLNSEPVVMQALSDEAQR-QGKIHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L +D G  R G+         
Sbjct: 119 VLLMIDMGDLREGIWFAHYEQIL 141


>gi|302535596|ref|ZP_07287938.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302444491|gb|EFL16307.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 343

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 83/298 (27%), Gaps = 35/298 (11%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D    + +   +           V K N YG G E++       G     V +  E   
Sbjct: 7   VDTARWRAHQKQITDQFPG--LIPVCKGNGYGFGHERLCEEATRMGADILAVGTTYEAAS 64

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           ++ +     + VL     G++ +     +I  ++SV  +          V     ++  +
Sbjct: 65  IKDH-FGGDLLVLTPFRRGEDPVPLPDRVIRSVASVDGVRGL-------VGARVVIECMS 116

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYK 190
              R G+S Q+           +  +L     HL       S      +     L +   
Sbjct: 117 SMRRHGISEQDLGLL---QSAIEDVRLEGFALHLPLDRPDGSDAVEEVIGWMDRLRAARL 173

Query: 191 GIEASLASS-------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
            +     S              P   F+         G  D                 ++
Sbjct: 174 PLHTMFVSHLRAEELARLQQQFPQTRFRARIGTRLWLGDHDAT----------QYRGSVL 223

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
            + +   G+   Y  QK  + D  + V A G + G     P  L G+          G
Sbjct: 224 DVTRVAKGDRFGYRQQKAAS-DGWLVVVAGGTSHGVGLEAPKALHGMMPRAKGVARAG 280


>gi|255530336|ref|YP_003090708.1| alanine racemase domain-containing protein [Pedobacter heparinus
           DSM 2366]
 gi|255343320|gb|ACU02646.1| alanine racemase domain protein [Pedobacter heparinus DSM 2366]
          Length = 375

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 12/150 (8%)

Query: 9   LKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L + L  +K N   +++ ++  AR    VK        ++++  L +AGV  F   ++ E
Sbjct: 24  LVVYLDRVKTNIQHAIDIIADPARLRPHVKT----HKTKEVSRLLMDAGVNKFKCATIAE 79

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-------CGV 120
              L +   +  +       P   ++I      P       +       +         +
Sbjct: 80  AEMLGMLAAKDVLLAYQPFGPKLARLISLIRKYPDTRFSCLIDNLETAKNISALASSEQL 139

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
             P  + ++ G NR G+             
Sbjct: 140 ELPVYIDLNVGMNRTGIQPDHCAIQLFEDA 169


>gi|222109718|ref|YP_002551982.1| alanine racemase domain-containing protein [Acidovorax ebreus
          TPSY]
 gi|221729162|gb|ACM31982.1| alanine racemase domain protein [Acidovorax ebreus TPSY]
          Length = 393

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 18/75 (24%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L +DL A++ N   M   +         +A+               +IA  L  AG +  
Sbjct: 28 LVVDLDAMERNIQRMAEFAHKHQVRWRPHAKM----------HKSAEIALQLEKAGARGH 77

Query: 61 FVTSVEEGVKLRLYT 75
           V  V E   L    
Sbjct: 78 CVQKVSEAEALAAGG 92


>gi|161502497|ref|YP_001569609.1| hypothetical protein SARI_00541 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863844|gb|ABX20467.1| hypothetical protein SARI_00541 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 367

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 50/144 (34%), Gaps = 8/144 (5%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIEVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-CGVSH 122
                 K+R       +     +   + + +     I + S    L   S      G +H
Sbjct: 60  RTYNLKKIRETGCTTCLLRSPCL--SEIEDVVRYADISLNSEPVVLRALSHEAQRQGKTH 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFT 146
              L VD G  R G+   E     
Sbjct: 118 QVLLMVDMGDLREGIWFSEYQRIL 141


>gi|182437470|ref|YP_001825189.1| hypothetical protein SGR_3677 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|239942694|ref|ZP_04694631.1| hypothetical protein SrosN15_17004 [Streptomyces roseosporus NRRL
           15998]
 gi|239989153|ref|ZP_04709817.1| hypothetical protein SrosN1_17757 [Streptomyces roseosporus NRRL
           11379]
 gi|291446158|ref|ZP_06585548.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|326778125|ref|ZP_08237390.1| alanine racemase domain protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465986|dbj|BAG20506.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|291349105|gb|EFE76009.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|326658458|gb|EGE43304.1| alanine racemase domain protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 343

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 79/277 (28%), Gaps = 33/277 (11%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E++A      G     V +  E  +++ +     + VL     G+E
Sbjct: 26  LVPVCKGNGYGFGHERLADETIRFGSDTLAVGTTYEAARIKDW-FSGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     +I  +SSV         +   V     ++  +   R G+  +E          
Sbjct: 85  PVPLPDRVIRSVSSV-------DGVHALVGARVVIECMSSMKRHGVKEEELGQL---HAA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
            +  +L     HL       S      +     L +    +     S             
Sbjct: 135 IEDVRLEGFALHLPLDRTDGSDAVEEVIGWMDRLRAARLPLHTMFVSHLRAEELARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  +                 ++ +   + G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHEATE----------YRGAVLDVTPVVKGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
           D  + V A G + G     P  L G+          G
Sbjct: 244 DGWLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|168704306|ref|ZP_02736583.1| D-threonine aldolase, metal-activated pyridoxal enzyme [Gemmata
          obscuriglobus UQM 2246]
          Length = 373

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 5/61 (8%)

Query: 16 LKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
          +K N + +  ++G  AR    VK         +I   L  AGV      ++ E   L   
Sbjct: 25 IKQNINRVVEMAGGPARLRPHVKT----HKTVEIVKLLLEAGVTKHKCATIAEAEMLAHA 80

Query: 75 T 75
           
Sbjct: 81 G 81


>gi|239815227|ref|YP_002944137.1| alanine racemase domain protein [Variovorax paradoxus S110]
 gi|239801804|gb|ACS18871.1| alanine racemase domain protein [Variovorax paradoxus S110]
          Length = 381

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 6/87 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL AL  N   M A +          VK         +IA     AG       ++ E  
Sbjct: 29  DLGALTRNIERMAAFAKARGVGLRPHVKT----HKSVEIARRQVAAGAIGVSCVTLGEAE 84

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFD 96
            +        +     + P +   +  
Sbjct: 85  VMVKAGIPDVLITSPAVTPSKIARVVK 111


>gi|323438672|gb|EGA96415.1| hypothetical protein SAO11_2500 [Staphylococcus aureus O11]
 gi|323441747|gb|EGA99390.1| hypothetical protein SAO46_2302 [Staphylococcus aureus O46]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 9/210 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              + I+++ +K N   +  +  S N +   V+K  A   G   I  +L   G+     +
Sbjct: 1   MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIA---GDRTIVESLKALGINHVAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            ++    +        +                D ++   +S++ Q+   +     G  H
Sbjct: 58  RLDNITSIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVA--EVLGKKH 115

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQLER 181
              L VD    R G+   + LD+     + K      +  +  C   D  S  +   + R
Sbjct: 116 KILLMVDWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINR 175

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQ 211
           F + +    G    + S     + P   + 
Sbjct: 176 FVSAVEREIGYRLKIISGGNSSMLPQLLYN 205


>gi|297158767|gb|ADI08479.1| hypothetical protein SBI_05359 [Streptomyces bingchenggensis BCW-1]
          Length = 343

 Score = 45.8 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 77/265 (29%), Gaps = 32/265 (12%)

Query: 22  SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIF 81
            +    G      V K N YG G E++A      G     V +  E  +++ Y     + 
Sbjct: 19  VIQQFPG---IVPVCKGNGYGFGHERLAEEASRIGSDILAVGTTYEAARMKDY-FSGDLL 74

Query: 82  VLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQE 141
           VL     G+E +     +I  +SSV  +          V+    ++V +   R G++  +
Sbjct: 75  VLTPFRRGEEPVPLPDRVIRSVSSVDGVYGL-------VNARVVIEVMSSMKRHGIAEAD 127

Query: 142 ALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-- 199
                      +  +L     HL              +     L +    +     S   
Sbjct: 128 LPKL---HAAIENVRLEGFAIHLPLDRTDGLDAVEEVIAWMDRLRAARLPLHTMFVSHLK 184

Query: 200 -----SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELV 254
                      P   F+         G  D                 ++ + +   G+  
Sbjct: 185 SEELARLQQQFPQTRFRARIGTRLWLGDHDST----------QYRGAVLDVTRVAKGDRF 234

Query: 255 SYGGQKKLTRDSLIAVAAIGYADGY 279
            Y  QK  + D  + V A G + G 
Sbjct: 235 GYRQQKTAS-DGYLVVVAGGTSHGV 258


>gi|316934654|ref|YP_004109636.1| alanine racemase domain-containing protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602368|gb|ADU44903.1| alanine racemase domain protein [Rhodopseudomonas palustris DX-1]
          Length = 360

 Score = 45.8 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 12/171 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L ID+  +++N   + AL   A  A    +K          +A    +AG +      + 
Sbjct: 18  LVIDMDRVEHNIARIQALCDAAGVANRPHIKT----HKSPLLAKMQIDAGARGITCQKLG 73

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEK-----IIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           E   +        +     I   +              +   ++V      +     G  
Sbjct: 74  EAEVMADAGIDDILISYNLIGEEKMARLGALHERAAMTVAADNAVVIAGLPAAAARAGRP 133

Query: 122 HPYALQVDTGFNRLGL-SLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
               ++ DTG  R G+ +  EA+         +       + +    D P 
Sbjct: 134 LGVVVECDTGRQRAGVETPAEAVALARMIAASEGLSFKGFMLYPTEDDWPR 184


>gi|299065741|emb|CBJ36917.1| conserved protein of unknown function, Alanine racemase domain
           protein [Ralstonia solanacearum CMR15]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 13/174 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +   R    VK       CE +  A   AG Q   V++++E 
Sbjct: 13  IDVARMTRNIERMQQRLDALGVRFRPHVKT----TKCEPVVRAQLAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +      +  ++ + G+ P +                   S        +     G + 
Sbjct: 69  EQFFAAGIRDIVYAV-GMAPAKLPQALALRRRGCDLKIVADSVTCAQAIAAFGGEHGEAF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              ++VD   +R G++  +           + G     +   A +       ++
Sbjct: 128 DVWIEVDVDGHRSGIAPDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHDA 181


>gi|150019968|ref|YP_001305322.1| alanine racemase domain-containing protein [Thermosipho
           melanesiensis BI429]
 gi|149792489|gb|ABR29937.1| alanine racemase domain protein [Thermosipho melanesiensis BI429]
          Length = 353

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 44/155 (28%), Gaps = 10/155 (6%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDFF 61
            F +L I+L  +  N   +    GN    AV K    N       KIA  L   G+    
Sbjct: 2   NFPKLIINLEHIAKNAEILLKKLGNIELVAVTKLVLGN------PKIAKILKEVGIPKIG 55

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGV 120
            + +    K+  +       +L      +           +IS                 
Sbjct: 56  ESRLLNIKKMISHNIPGPFQLLRIPMISELNEAVPIVDEILISDEFTALKIDEIAQKYDK 115

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG 155
           +      VD G  R G+  ++A     N   K   
Sbjct: 116 NIELIYMVDVGDLREGVWFEKARKTIENVAKKLKM 150


>gi|254391453|ref|ZP_05006655.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294813716|ref|ZP_06772359.1| Alanine racemase domain protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326442138|ref|ZP_08216872.1| hypothetical protein SclaA2_13789 [Streptomyces clavuligerus ATCC
           27064]
 gi|197705142|gb|EDY50954.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294326315|gb|EFG07958.1| Alanine racemase domain protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 343

 Score = 45.4 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 79/277 (28%), Gaps = 33/277 (11%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E+++  +   G     V +  E  +++ +     + VL     G+E
Sbjct: 26  LVPVCKGNGYGFGHERLSEEVNRFGTDMLAVGTTYEAARIKDW-FGGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     ++  +SSV         +   V     ++  +   R G+   E    T     
Sbjct: 85  PVPLPDRVVRSVSSV-------DGVHALVGARVVIECMSSMKRHGVLEHELPQLT---AA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
               +L     HL       S      +     L +    +     S             
Sbjct: 135 IDNVRLEGFALHLPLDRTDGSDAVEEVIAWMDRLRAARLPLHTMFVSHLRADELARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  D                 ++ + +   G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHDST----------QYRGAVLDVTRVAKGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
           D  + V A G + G     P  L G+          G
Sbjct: 244 DGWLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|239624944|ref|ZP_04667975.1| D-threonine aldolase [Clostridiales bacterium 1_7_47_FAA]
 gi|239521330|gb|EEQ61196.1| D-threonine aldolase [Clostridiales bacterium 1_7_47FAA]
          Length = 374

 Score = 45.4 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 81/302 (26%), Gaps = 32/302 (10%)

Query: 13  LTALKNNWHSMNALSGNAR-TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           L  +K N      L+G        VK         ++      AG+  F   ++ E  ++
Sbjct: 22  LDIIKENIKKAVDLAGGPGYLWPHVKT----HKMAQMVRLQMEAGITRFKCATIAEA-EM 76

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSK--------LMSCGVSHP 123
                   + V Y +                      +                 G+   
Sbjct: 77  AAGCGAGHVLVAYPLVGPNISRFIQLMQAYPKVCFWTVGDNEDQIRALGQLCSEAGLRAN 136

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
             + V+ G +R G+ +++   F  +          + +  L C D   +  +  Q ++  
Sbjct: 137 VLVDVNLGMDRTGVPVKDTEAFFMDCALMDG----VSMMGLHCYDGHRTEHDFTQRKKEA 192

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
              +      A + +    L    Y  +    G S              +  ++     +
Sbjct: 193 DTSA------AQIKTICSHLCEKGYSCKTLVLGGSPSMPCYVDFPRTGYEVYLSPGTYFV 246

Query: 244 LIRKALAGELVSYGGQKKLTRDSLIA-VAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
                  G  + Y         +++  V +      + L L     +   S   G +G I
Sbjct: 247 NDY----GYTMKYPDLVFTPGAAVMTRVISCPLKGHFTLDLG---YKGIASDPEGTRGVI 299

Query: 303 KG 304
            G
Sbjct: 300 AG 301


>gi|167040121|ref|YP_001663106.1| alanine racemase domain-containing protein [Thermoanaerobacter sp.
           X514]
 gi|300914206|ref|ZP_07131522.1| alanine racemase domain protein [Thermoanaerobacter sp. X561]
 gi|307724559|ref|YP_003904310.1| alanine racemase domain-containing protein [Thermoanaerobacter sp.
           X513]
 gi|166854361|gb|ABY92770.1| alanine racemase domain protein [Thermoanaerobacter sp. X514]
 gi|300889141|gb|EFK84287.1| alanine racemase domain protein [Thermoanaerobacter sp. X561]
 gi|307581620|gb|ADN55019.1| alanine racemase domain protein [Thermoanaerobacter sp. X513]
          Length = 354

 Score = 45.4 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 115/355 (32%), Gaps = 57/355 (16%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           +  L+I+L  L+ N  ++  L    N +   V K            ++A  +   GV+  
Sbjct: 2   YPLLRINLVKLRENTQTIVNLCEKKNIKVVGVTKVFCA------IPEVAQTMVKGGVEIL 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + ++   KL          +L      + + +     I + S +  +     +     
Sbjct: 56  GDSRIKNLKKL--QHIPVPKMLLRIPMKSEVEEVIKYADISLNSEIDTIKSLSEEAKKQR 113

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQ 178
             H   L VD G  R G+  ++ +         +  +L  I ++L C      +     +
Sbjct: 114 KIHEIILMVDLGDLREGVLKEDVIPIVEQIVKLEGIRLRGIGTNLTCYGSVIPTPDILEE 173

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTD-KINKSHPMQTVVT 237
           L   +  I+    +   + S      G +    L + G+   G T  +I ++  +     
Sbjct: 174 LVEIKNSINKKFNLNLDIVSG-----GNSSSLYLVQNGLIPRGITQLRIGEAIVLGRETA 228

Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
              RI      +    +     +   + S            YP  + G+D+     V++ 
Sbjct: 229 FGDRIPHTYDDVF--TLEAQIVELKEKPS------------YPRGILGMDAFGERQVYVD 274

Query: 298 GKGFIKGYMVPILGK--ITM-----------------DMTMFDITDS-LSIEVGD 332
                +  +   +G+  + M                 D  + ++T+S    +VGD
Sbjct: 275 RGIMKRAILA--IGRQDVNMNDLIPIDSSIELIGSSSDHLIVNVTNSTYPYKVGD 327


>gi|289810431|ref|ZP_06541060.1| hypothetical protein Salmonellaentericaenterica_41087 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 169

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A+ N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVLNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|213618848|ref|ZP_03372674.1| hypothetical protein SentesTyp_21235 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 205

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A+ N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVLNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|16761283|ref|NP_456900.1| hypothetical protein STY2588 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29141021|ref|NP_804363.1| hypothetical protein t0506 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213161246|ref|ZP_03346956.1| hypothetical protein Salmoneentericaenterica_14910 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213417159|ref|ZP_03350303.1| hypothetical protein Salmonentericaenterica_04172 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213426986|ref|ZP_03359736.1| hypothetical protein SentesTyphi_16055 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649624|ref|ZP_03379677.1| hypothetical protein SentesTy_21405 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289827478|ref|ZP_06546090.1| hypothetical protein Salmonellentericaenterica_17177 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25380535|pir||AD0801 conserved hypothetical protein STY2588 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503582|emb|CAD07590.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136646|gb|AAO68212.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 367

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A+ N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVLNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|160902007|ref|YP_001567588.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
 gi|160359651|gb|ABX31265.1| Orn/DAP/Arg decarboxylase 2 [Petrotoga mobilis SJ95]
          Length = 390

 Score = 45.4 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 69/309 (22%), Gaps = 28/309 (9%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +D   +K N++ +     +      VK N+       I   L + G   F V S  E 
Sbjct: 19  LVLDTNYVKENYYKLKNSINDVEIFYAVKANS--H--PSILETLRDLGAS-FDVASRGEI 73

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KL                  ++ I F  +      +V       K+           ++
Sbjct: 74  EKLMRLGISTDKMSFGNTIKKEKDIKFAWDNGVEYFAVDAEMEVEKIARNAPGAKVYGRL 133

Query: 129 DTGFNRLGLSLQ-----EALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER-- 181
               N     L      +           K   L              +     +     
Sbjct: 134 SMSSNDSDWPLSGKFGTDVDHLIEILKYAKRKGLIPYGVSFHVGSQSYNKYKWKEAILNA 193

Query: 182 ---FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
              F  L      ++         +       ++   G  +    + I +       +  
Sbjct: 194 SEVFEKLHKQKIDLKMLNLGGGIPVKHTKPVPEVEEIGEVI---NESIKEYLGWVDGLRV 250

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
            +         AG + S    +             G   G   T+               
Sbjct: 251 LSEPGRSMVGNAGIIASRVLLRGRKGTQNWVFLDTGVFHGLMETIENFRY---------- 300

Query: 299 KGFIKGYMV 307
           +  ++G   
Sbjct: 301 EVLVEGKEY 309


>gi|209885817|ref|YP_002289674.1| metal-activated pyridoxal enzyme [Oligotropha carboxidovorans OM5]
 gi|209874013|gb|ACI93809.1| metal-activated pyridoxal enzyme [Oligotropha carboxidovorans OM5]
          Length = 366

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 12/153 (7%)

Query: 9   LKIDLTALKNNWHSMNALS---GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
           L +DL A++ N  ++        + R     K       C +IA     AG       +V
Sbjct: 21  LIVDLDAMQANIKALATRVSAFPSVRATPHAKA----HKCLEIARLQMAAGASRICCQNV 76

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLI----PVISSVPQLTFYSKLMS-CGV 120
            E   L        +     I   + + + +          +    Q+   +K     GV
Sbjct: 77  AEVETLATGGITNILLSNEIIGADKARRLAEAARTAKVAVCVDHADQVAVLAKAADEAGV 136

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKK 153
           +    +++D G  R G+   E+         K 
Sbjct: 137 TLDILVEIDVGMGRCGVPSTESAVALAREVAKH 169


>gi|330819823|ref|YP_004348685.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3]
 gi|327371818|gb|AEA63173.1| hypothetical protein bgla_2g07000 [Burkholderia gladioli BSR3]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 13/172 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++ N   M     +   R    VK       CE +  A   AG +   V++++E 
Sbjct: 13  IDVPRMQRNIERMQQRLDALGVRFRPHVKT----TKCEPVVRAQLAAGARGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +         ++ + G+ PG+                   S V      +     G+S 
Sbjct: 69  EQFFAQGIDDIVYAV-GMVPGKLPQALALIRRGCDLKLVADSLVSAKAIAAFGREQGLSF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
              +++D   +R GL+  +           + G     +   A +       
Sbjct: 128 EVWVEIDVDGHRSGLAPADERLIEVGRALVEGGMKLGGVLAHAGSSYDYHRH 179


>gi|302520490|ref|ZP_07272832.1| alanine racemase domain-containing protein [Streptomyces sp. SPB78]
 gi|318058993|ref|ZP_07977716.1| hypothetical protein SSA3_13681 [Streptomyces sp. SA3_actG]
 gi|318075519|ref|ZP_07982851.1| hypothetical protein SSA3_02062 [Streptomyces sp. SA3_actF]
 gi|333025743|ref|ZP_08453807.1| hypothetical protein STTU_3247 [Streptomyces sp. Tu6071]
 gi|302429385|gb|EFL01201.1| alanine racemase domain-containing protein [Streptomyces sp. SPB78]
 gi|332745595|gb|EGJ76036.1| hypothetical protein STTU_3247 [Streptomyces sp. Tu6071]
          Length = 343

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 85/288 (29%), Gaps = 28/288 (9%)

Query: 17  KNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTP 76
            ++ H +    G      V K N YG G E++A      G     V +  E  +++ +  
Sbjct: 14  AHHKHVLEQFPG---IVPVCKGNGYGFGHERLAEEATRFGSDMLAVGTTYEAARIKDW-F 69

Query: 77  QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY---SKLMSCGVSHPYALQVDTGFN 133
              + VL     G+E +     +I  +SSV  +        ++    S        +   
Sbjct: 70  SGDLLVLTPFRRGEEPVPLPDRVIRSVSSVDGVRALVGARVMIEVMSSMKRHGVTRSDLQ 129

Query: 134 RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIE 193
            LG ++ +                         A      +   +L      +SH K  E
Sbjct: 130 ALGSAIDDVRLEGFAIHLPLDRTDGTDAVEEVIA--WMDALRGARLPLHTMYVSHVKADE 187

Query: 194 ASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGEL 253
                +      P   F+     +   G  +                 I+ + +   GE 
Sbjct: 188 L----ARLSQQFPQTKFRARIGTLLWLGDHEAT----------QYRGTILDVTRVAKGER 233

Query: 254 VSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLG 297
             Y   +K T D  + VAA G + G     P  L G+          G
Sbjct: 234 FGYRQ-QKATSDGWLVVAAGGTSHGVGLEAPKALHGVMPRAKGVARAG 280


>gi|17547428|ref|NP_520830.1| hypothetical protein RSc2709 [Ralstonia solanacearum GMI1000]
 gi|17429731|emb|CAD16416.1| putative ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum GMI1000]
          Length = 376

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 13/174 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +   R    VK       CE +  A   AG Q   V++++E 
Sbjct: 13  IDVARMTRNIERMQQRLDALGVRFRPHVKT----TKCEPVVRAQLAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +         I    G+ P +                   S        +     G + 
Sbjct: 69  EQFFSAGI-CDIVYAVGMAPARLPQALALRRRGCDLKIVADSVTCAQAIAAFGGEHGEAF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              ++VD   +R G++  +    T      + G     +   A +       ++
Sbjct: 128 DVWIEVDVDGHRSGIAPDDDRLITVGRVLAEGGMRLGGVLAHAGSSYEYHAHDA 181


>gi|304399031|ref|ZP_07380900.1| alanine racemase domain protein [Pantoea sp. aB]
 gi|304353491|gb|EFM17869.1| alanine racemase domain protein [Pantoea sp. aB]
          Length = 380

 Score = 45.0 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 14/142 (9%)

Query: 9   LKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++D   L+ N   M   A +        +K          IA     +G Q   V+   
Sbjct: 22  IEVDAARLECNLQHMQRKARAAGVALRPHIKT----HKSVWIARRQIESGAQGITVSKPS 77

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEK--------IIFDTNLIPVISSVPQLTFYSKLMSC 118
           EG+       +  +     +HP                  LI            +     
Sbjct: 78  EGISFIQGGIRDLLLAYPVVHPQSVAELLRLAVLHQVRLTLIADSLQGVAAIAEACQHQP 137

Query: 119 GVSHPYALQVDTGFNRLGLSLQ 140
           G     A++VD G +R+G++  
Sbjct: 138 GCELAVAIKVDVGLHRIGVNPD 159


>gi|195953881|ref|YP_002122171.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933493|gb|ACG58193.1| Ornithine decarboxylase [Hydrogenobaculum sp. Y04AAS1]
          Length = 400

 Score = 45.0 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/342 (13%), Positives = 95/342 (27%), Gaps = 22/342 (6%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             L I+L  +K  +  +      A+    VK N      ++I   L + G   + V S  
Sbjct: 46  PTLVINLDRIKERFIELQEALKEAKIYYAVKAN----DHQEILALLNDLG-SGYEVASSW 100

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           E  K+          +        + I +         S+       KL          +
Sbjct: 101 ELEKVLRLGVDGSRIISSNPVKPLDFIDYAYKSGIKAFSIDSYKEIDKLKKIAPRSRVYI 160

Query: 127 QV--------DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV--NS 176
           ++            N+ G+ +  ALD    +  +      +     +  ++  +      
Sbjct: 161 RLIVPNEGSDWPLTNKFGVDVDTALDILEYAKYQGFVPYGITFHVGSQCNNLRNWFIGIK 220

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
              E +   I     +          +        +   G  +     K     PM+  +
Sbjct: 221 KAWELWEKAIYKDIKLTMLNLGGGIPVNYQYESLSIRDIGSYIEALLQKYFLIKPMEVQI 280

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
                ++     L   ++    +     +S       G  +G    L G+          
Sbjct: 281 EPGRGLVGDAGVLVSSVIGKTTKYINGEESYWIYLDTGVFNGLAEVLGGISYPMYAEQKG 340

Query: 297 GGKGF-IKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
             K + I G         +MD  + + T    +++GD + I 
Sbjct: 341 EIKPYTIAGVSCD-----SMD-IISNFTYLPEVDIGDRVYIM 376


>gi|307297660|ref|ZP_07577466.1| alanine racemase domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916920|gb|EFN47302.1| alanine racemase domain protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 353

 Score = 45.0 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 113/341 (33%), Gaps = 27/341 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             ++ ++  ++  N   +  L+       AAV K      G   IA  L N+GV++   +
Sbjct: 1   MAKVVVNTVSIGANAKRVRELAEVNGVEIAAVTKVV---CGDPTIASILLNSGVKEIGES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCGVSH 122
            +E   ++      +   +L      + + + D     +I  +  L+         G   
Sbjct: 58  RLENISRITNAGIDSDFLLLRLPERSKFREVLDNVDTVLIGDLDSLSKLYELSSETGQEV 117

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
            +   +DTG  R G+   EA      +F      L  I ++L C     +       ++F
Sbjct: 118 NFIYMIDTGDLREGVMYYEAESVLEKAFEIAGENLEGIGTNLGCFGGVIATP-----KKF 172

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             L+S    +   L   +G  L            +   G   K      +   +     +
Sbjct: 173 EILLS----LGEFLRKKTGYSLRRYSAGNTASLPLLEKGIVPKGINHFRLGESILCGTDV 228

Query: 243 ILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY--ADGYPL--TLSGLDSEHSPSVFLGG 298
              R+       ++    ++   +      IG    D +                + LG 
Sbjct: 229 TNNREVPGTLQDTFTLYGEVIEIAEKPSVPIGEIGRDAFGRIPHFEDKGKRIKAILDLGE 288

Query: 299 K-GFIKGYMVPILG--KI---TMDMTMFDITDSL-SIEVGD 332
           +     G + P++G  ++   + D  + D+T+S  S  VGD
Sbjct: 289 QDVLPSG-LTPLVGGCEVLHASSDHLIVDVTESEKSFSVGD 328


>gi|323528944|ref|YP_004231096.1| alanine racemase domain-containing protein [Burkholderia sp.
           CCGE1001]
 gi|323385946|gb|ADX58036.1| alanine racemase domain protein [Burkholderia sp. CCGE1001]
          Length = 376

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++ N   M     +   +    VK       CE++  A  +AG     V++++E 
Sbjct: 13  IDVERMQRNIARMQQRMNALGVKFRPHVKT----TKCEQVVRAQMDAGASGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +             +       I   S        +          
Sbjct: 69  EQFFAGGVRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAIVAFGREHDERFE 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +++D   +R G++ ++ +  T        G  +  +   A +       + 
Sbjct: 129 VWIEIDVDGHRSGIAPEDDMLLTVGKILSDGGMPAGGVLAHAGSSYDYDTHDE 181


>gi|167037459|ref|YP_001665037.1| alanine racemase domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115873|ref|YP_004186032.1| alanine racemase domain-containing protein [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166856293|gb|ABY94701.1| alanine racemase domain protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928964|gb|ADV79649.1| alanine racemase domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 354

 Score = 45.0 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 114/354 (32%), Gaps = 55/354 (15%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           +  L+I+L  L+ N  ++  L    N +   V K            ++A  +   GV+  
Sbjct: 2   YPLLRINLVKLRENTQTIVNLCEKKNIKVVGVTKVFCA------IPEVAQTMVKGGVEIL 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + ++   KL          +L      + + +     I + S +  +     +     
Sbjct: 56  GDSRIKNLKKL--QHIPVPKMLLRIPMKSEVEEVIKYADISLNSEIDTIKSLSEEAKKQR 113

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQ 178
             H   L VD G  R G+  ++ +         +  +L  I ++L C      +     +
Sbjct: 114 KIHEIILMVDLGDLREGVLKEDVIPIVEQIVKLEGIRLRGIGTNLTCYGSVIPTPDILEE 173

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
           L   +  I+    +                +  +   G S      +        T +  
Sbjct: 174 LVEIKNSINKKFNL----------------NLDIVSGGNSSSLYLVQNGLIPREITQLRI 217

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
              I+L R+   G+ + +      T ++ I       +  YP  + G+D+     V++  
Sbjct: 218 GEAIVLGRETAFGDRIPHTYDDVFTLEAQIVELKEKPS--YPRGILGMDAFGERQVYVDR 275

Query: 299 KGFIKGYMVPILGK--ITM-----------------DMTMFDITDS-LSIEVGD 332
               +  +   +G+  + M                 D  + ++T+S    +VGD
Sbjct: 276 GIMKRAILA--IGRQDVNMNDLIPIDSSIELIGSSSDHLIVNVTNSTYPYKVGD 327


>gi|326390148|ref|ZP_08211709.1| alanine racemase domain protein [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993796|gb|EGD52227.1| alanine racemase domain protein [Thermoanaerobacter ethanolicus JW
           200]
          Length = 354

 Score = 45.0 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 67/203 (33%), Gaps = 15/203 (7%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           +  L+I+L  L+ N  ++  L    N +   V K            ++A  +   GV+  
Sbjct: 2   YPLLRINLEKLRENTQTIVNLCEKRNIKVVGVTKVFCA------IPEVAQTMVKGGVEIL 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + ++   KL          +L      + + +     I + S +  +     +     
Sbjct: 56  GDSRIKNLKKL--QHIPVPKMLLRIPMKSEVEEVIKYADISLNSEIDTIKSLSEEAKKQR 113

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQ 178
             H   L VD G  R G+  ++ +         +  +L  I ++L C      +     +
Sbjct: 114 KIHEIILMVDLGDLREGVLKEDVIPIVEQIVKLEGIRLRGIGTNLTCYGSVIPTPDILEE 173

Query: 179 LERFRTLISHYKGIEASLASSSG 201
           L   +  I+    +   + S   
Sbjct: 174 LVEIKNSINKKFNLNLDIVSGGN 196


>gi|298242855|ref|ZP_06966662.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297555909|gb|EFH89773.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 370

 Score = 45.0 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 38/153 (24%), Gaps = 11/153 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +DL  L+ N       +  AR      +K         +IA     AG        + 
Sbjct: 16  LLVDLARLEKNIRRYADSAAKARVRLRPHIKT----HKTLEIAKMQLQAGAGGITAAKLG 71

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV-----ISSVPQLTFYSKLMSCGVS 121
           E         +        I P +                  S              G +
Sbjct: 72  EAEVFAEAGIEDIFVAYPIIGPEKALRAARLAQHCRLIVGVESEKGVQQLSEAASQIGST 131

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL 154
               +++D+G  R G+  + A        +   
Sbjct: 132 LLVRVEIDSGLGRTGVGQEAAGKLCRQVLDAPG 164


>gi|309812008|ref|ZP_07705774.1| alanine racemase, N-terminal domain protein [Dermacoccus sp.
          Ellin185]
 gi|308434066|gb|EFP57932.1| alanine racemase, N-terminal domain protein [Dermacoccus sp.
          Ellin185]
          Length = 200

 Score = 45.0 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 26/93 (27%), Gaps = 6/93 (6%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           RL  DL  L+ N  +M +L  +A  A    VK         +IA    +A      V +
Sbjct: 5  PRLVADLDVLERNIDAMASLGRDAGVALRPHVKT----HKMPEIATMQRDAATHGITVAT 60

Query: 65 VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT 97
          + E                      +       
Sbjct: 61 IGEAEVFVDAGFDDVSIAYPLWVDDEAGRRLRA 93


>gi|171317786|ref|ZP_02906967.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5]
 gi|171097070|gb|EDT41925.1| alanine racemase domain protein [Burkholderia ambifaria MEX-5]
          Length = 376

 Score = 45.0 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 11/173 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++NN   M A   +   +    VK       C+ +  A   AG Q   V++++E 
Sbjct: 13  IDVDRMRNNIARMQAHLDALGVKFRPHVKT----TKCQHVVDAQIAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +  I          +       I   S        +     G    
Sbjct: 69  EQFFAAGVRDIVYAVGMIPAKLGQALALRRQGCDLKIIADSLETAHAIAAFGREHGERFD 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             ++VD   +R G+   + L           G     +   A +       N+
Sbjct: 129 VWIEVDVDGHRSGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHNA 181


>gi|295837780|ref|ZP_06824713.1| alanine racemase [Streptomyces sp. SPB74]
 gi|197698937|gb|EDY45870.1| alanine racemase [Streptomyces sp. SPB74]
          Length = 343

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 4/90 (4%)

Query: 17  KNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTP 76
            ++ H +    G      V K N YG G E++A      G     V +  E  +++ +  
Sbjct: 14  AHHKHVLEQFPG---IVPVCKGNGYGFGHERLAEEATRFGSDMLAVGTTYEAARIKDW-F 69

Query: 77  QARIFVLYGIHPGQEKIIFDTNLIPVISSV 106
              + VL     G+E +     +I  +SSV
Sbjct: 70  SGDLLVLTPFRRGEEPVPLPDRVIRSVSSV 99


>gi|300310473|ref|YP_003774565.1| amino acid aldolase or racemase [Herbaspirillum seropedicae SmR1]
 gi|300073258|gb|ADJ62657.1| amino acid aldolase or racemase protein [Herbaspirillum seropedicae
           SmR1]
          Length = 376

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 52/181 (28%), Gaps = 13/181 (7%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           M+          ID+  ++ N   M     +   R    VK       C ++  A   AG
Sbjct: 1   MNLASLPTPAALIDVARMQRNITRMQQRMDALGVRFRPHVKT----TKCNEVVQAQLQAG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTF 111
                V++++E  +         ++ +             +       I   S V     
Sbjct: 57  ASGITVSTLKEAEQFFAAGISDIVYAVGMAPTKLGQALALRRQGCNLKIVADSVVCAEAI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
            +   +        +++D   +R G++ ++A      +     G     +   A +    
Sbjct: 117 VAFGQAQEECFDVWIEIDVDGHRSGIAPEDATLLAVGNVLHAGGMRIGGVIAHAGSSYDY 176

Query: 172 S 172
            
Sbjct: 177 D 177


>gi|282864522|ref|ZP_06273577.1| alanine racemase domain protein [Streptomyces sp. ACTE]
 gi|282560461|gb|EFB66008.1| alanine racemase domain protein [Streptomyces sp. ACTE]
          Length = 362

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 96/347 (27%), Gaps = 42/347 (12%)

Query: 7   LRLKIDLTALKNNWH-SMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
           L L ID    + +    +    G      V K N YG G  ++       G     V +V
Sbjct: 3   LTLTIDTERWREHHRGVLGQYPG---LVPVCKGNGYGFGHHRLMRETTRLGTGLAAVGTV 59

Query: 66  EEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA 125
           +E  + + + P   + VL     G+         I V+SS       +        H   
Sbjct: 60  QEAARAQDFYP-GDLLVLTPYRNGEASPALSDRTIRVVSSPGHCDGLAG-------HRVV 111

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           +++ +   R G++  +              +      HL       +          R L
Sbjct: 112 VELRSSMRRHGITEADLPALRPVMS---GWEFEGFSIHLPLNRVGGAGGAEEVASWVRRL 168

Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
                 +     S          H +   PG      T                +R++ +
Sbjct: 169 REERMPLRQVFVSHLSAEEMAGLHAEF--PGTRFRLRTG-TKLWLGAPKATRYTSRVLDV 225

Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGKGF 301
            +   G  +  G ++  +    + V + G + G     P TLSGL       V +G    
Sbjct: 226 TRPERGRGLGAGRRRPASGP-HLVVVSGGVSHGVGLRAPRTLSGLRDRARHLVGIGHACL 284

Query: 302 --------IKGYMVPILG------KITMDMTMFDITDSLSIEVGDYI 334
                     G              +     +    D    +VGD +
Sbjct: 285 DHHLSPFVWDGVRCRFAAPPRLQESV----LLVR-GDGPPPKVGDEV 326


>gi|239834636|ref|ZP_04682964.1| Serine racemase [Ochrobactrum intermedium LMG 3301]
 gi|239822699|gb|EEQ94268.1| Serine racemase [Ochrobactrum intermedium LMG 3301]
          Length = 418

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 39/142 (27%), Gaps = 13/142 (9%)

Query: 9   LKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           ++ID   L  N   M   +     R    +K          IA      G      +  +
Sbjct: 57  VEIDEDRLIRNLKEMQQKADKAGVRLRPHIKT----HKSLMIANRQLQLGAIGVTASKPD 112

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVI-------SSVPQLTFYSKLMSCG 119
           E +        +       + P     +  +  I            +      +   +  
Sbjct: 113 EALVFVEGGIPSVTLAYPIVRPDSIGRLIRSAQIRDTELMFIAAHEIGIQAIGAAAEAHD 172

Query: 120 VSHPYALQVDTGFNRLGLSLQE 141
           V     L+VD G  R+G+  Q+
Sbjct: 173 VKLGVFLKVDVGLGRVGVKPQD 194


>gi|291533520|emb|CBL06633.1| Diaminopimelate decarboxylase [Megamonas hypermegale ART12/1]
          Length = 372

 Score = 44.7 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 1  MHSNEFLR-LK-IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
          M + ++   L+ I L  ++ N++ +       +    +K N+     + I   L   G  
Sbjct: 13 MLAQKYATPLEVISLEHIEENYNLLCKHIPRLKVFYAIKANS----AKCILEKLIKLG-S 67

Query: 59 DFFVTSVEEGVKLRLYTPQARIFVL 83
          +F V S  E   L          + 
Sbjct: 68 NFDVASAGEIRLLSKMGVSGEKMIY 92


>gi|307727882|ref|YP_003911095.1| alanine racemase domain-containing protein [Burkholderia sp.
           CCGE1003]
 gi|307588407|gb|ADN61804.1| alanine racemase domain protein [Burkholderia sp. CCGE1003]
          Length = 376

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 51/173 (29%), Gaps = 11/173 (6%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M              VK       CE++  A   AG +   V++++E 
Sbjct: 13  IDVARMNRNIERMQQRMNTLGVSFRPHVKT----TKCEQVVRAQLAAGARGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +             +       I   S        +       +  
Sbjct: 69  EQFFAAGIRDIVYAVGMAPTKLPQALALRRQGCDLKIVADSVACAEAIVAFGRRYDEAFE 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             +++D   +R G++ ++ L  T  +     G     +   A +       + 
Sbjct: 129 VWIEIDVDGHRSGIAPEDDLLITVAATLSNGGMYVGGVLAHAGSSYDYDTHDE 181


>gi|254505511|ref|ZP_05117658.1| Alanine racemase, N-terminal domain family [Vibrio parahaemolyticus
           16]
 gi|219551628|gb|EED28606.1| Alanine racemase, N-terminal domain family [Vibrio parahaemolyticus
           16]
          Length = 354

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 8/206 (3%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSG--NARTAAVVK-DNAYGLGCEKIAPALYNAGVQDFF 61
            +  + I L  + +N H++ +       + A V K   AY     ++  A+   G+    
Sbjct: 3   HYPCINIHLDTITHNAHNLVSACERFGVKPAGVTKLACAY----PEVGEAILAGGIGILA 58

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
            + ++   KLR    +  +  +  I   +E + +    +       Q      +    + 
Sbjct: 59  DSRIQNLKKLRHLDGETMLLRIPAISQAREVVQYADISLNSELETLQALAIEAVKQHKIH 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLE 180
               +             +E L         +  QL  + ++LAC      S  N  QL 
Sbjct: 119 QVIIMHDMGDLREGSFYQEETLQLAREVMKLEGLQLVGLGTNLACYGGVEPSIDNQTQLI 178

Query: 181 RFRTLISHYKGIEASLASSSGILLGP 206
                I     I  S  S +     P
Sbjct: 179 ALAQQIETEHNIRLSYLSGASSAGLP 204


>gi|156740573|ref|YP_001430702.1| alanine racemase domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156231901|gb|ABU56684.1| alanine racemase domain protein [Roseiflexus castenholzii DSM
           13941]
          Length = 349

 Score = 44.7 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 12/151 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           + IDL  L+ N     A       A    +K         +IA     AG        + 
Sbjct: 11  VVIDLDRLEANIARFQAHLDRHGIANRPHIKT----HKIPQIAQMQIAAGAVGITCQKLG 66

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-----SKLMSCGVS 121
           E   +              +   + + +        +S             + +   G+ 
Sbjct: 67  EAEVMADAGITDIFLPYNILGAAKLERLVALARRVQVSVTADSPDVVTGLGAAMSGAGLE 126

Query: 122 HPYALQVDTGFNRLGLS-LQEALDFTHNSFN 151
            P  ++ DTG  R G+    EA +       
Sbjct: 127 LPVLVECDTGMGRCGVQTPAEAAELAFQIAR 157


>gi|222099782|ref|YP_002534350.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359]
 gi|221572172|gb|ACM22984.1| Ornithine decarboxylase [Thermotoga neapolitana DSM 4359]
          Length = 386

 Score = 44.7 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 80/296 (27%), Gaps = 18/296 (6%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL+ ++  +  M A    A     VK N+      +I   L   G   F V S  E  KL
Sbjct: 20  DLSVVEKKFLEMKAALKGADIYYAVKANS--H--PRILSLLAKLGCN-FDVASKGEIEKL 74

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
                  +          +E I F       + +V       K+          +++ T 
Sbjct: 75  LALGISGKRMSFGNTIKKEEDIAFAYKNGIRLFAVDSEMEIEKVAISAPGSRIFVRIATD 134

Query: 132 FNRLGLS--------LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL--ER 181
            +                ALD    +   KL    +     +   +P S   ++ +  + 
Sbjct: 135 GSDADWPLSRKFGTDPDHALDLLFYAAKMKLIPAGVSFHVGSQNLNPESWRKAISVAGKI 194

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F+  +     +          +        +   G  +    + I+++      +   + 
Sbjct: 195 FKKAMRSGLNLFLLNVGGGFPVQHRKPIPTMEEIGRVI---EEAIDENLWFVHGLKLISE 251

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
                   AG LV+    K             G   G   T+   + E        
Sbjct: 252 PGRYMVGEAGWLVTKVLLKSERNGEKWVYLDAGVFHGLAETMQNFEYEVRVLGKEN 307


>gi|168817905|ref|ZP_02829905.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205344710|gb|EDZ31474.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320086793|emb|CBY96565.1| hypothetical protein SENTW_2484 [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 367

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 96/347 (27%), Gaps = 24/347 (6%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP----SSHVNSVQL 179
             L VD G  R G+   E                  +       +       +  N    
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRILETVTLITGLPGLELYGLGTNFNCYGTVLPTVKNGEDF 178

Query: 180 ERFRTLISHYKGIEASLASSSGILL--------GPNYHFQLTRPGISLYG-GTDKINKSH 230
                 +    GI     S+              P     L   G+  +G     +   +
Sbjct: 179 LALAARLEADSGIPVRRLSAGNCTSYHLLDKGIWPQGLNHLRIGGLHEFGIEYVDMKYLN 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD--S 288
                     +       L  E++    +  +    L   A +         +      +
Sbjct: 239 EFHHSAKPVGKACSDMYILEAEIIELNSKPTVPVGELGVDAFLQSKTFVDRGIRRRALLA 298

Query: 289 EHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLS-IEVGDYI 334
                V           +  ILG+ + D T+ DI D    ++VGD +
Sbjct: 299 FGRQDVPSDNCVPCDDAIT-ILGQTS-DHTLVDIEDCRQSLKVGDVV 343


>gi|153831634|ref|ZP_01984301.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01]
 gi|148872144|gb|EDL70961.1| metal-activated pyridoxal enzyme [Vibrio harveyi HY01]
          Length = 368

 Score = 44.7 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 8/81 (9%)

Query: 1  MHSNEF--LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAG 56
          M  N+     L +D+  +K N  +M     +         K          IA    +AG
Sbjct: 1  MDINQLETPSLFVDIDKMKTNIKAMQQRINDLGLTLRPHTKA----HKIPAIAQMQLDAG 56

Query: 57 VQDFFVTSVEEGVKLRLYTPQ 77
           Q   V  + E   +     +
Sbjct: 57 AQGICVAKLGEAEVMAQGGIK 77


>gi|160935372|ref|ZP_02082754.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441730|gb|EDP19430.1| hypothetical protein CLOBOL_00267 [Clostridium bolteae ATCC
           BAA-613]
          Length = 371

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 17/187 (9%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
             ++ N   M +++GNA R    VK        +K+       G+  F   ++ E   + 
Sbjct: 24  DIIEQNIKEMISVAGNANRLWPHVKS----HKMKKLVELQIKMGITRFKCATIAEAQMVA 79

Query: 73  LYTPQARIFVLYGIHPGQEKI------IFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                  +     + P  ++          T    +   + Q++  +       +    L
Sbjct: 80  ESGASDALVAYPLVGPNIDRFLELVKTYAGTRFWAIGDDLEQVSLLNSAAGSQETIVNFL 139

Query: 127 -QVDTGFNRLGLSLQEALDFTHNSFNKKL-----GQLSLIISHLACADDPSSHVNSVQLE 180
             V+ G NR G+S+    DF  N                  + +A  D     V+ +   
Sbjct: 140 ADVNMGTNRTGISINTLPDFYRNCCKLPWLSVQGLHCYDGNNGIAEYDAREKAVDKIDRA 199

Query: 181 RFRTLIS 187
            F T+ +
Sbjct: 200 VFSTVAA 206


>gi|217077735|ref|YP_002335453.1| ornithine decarboxylase [Thermosipho africanus TCF52B]
 gi|217037590|gb|ACJ76112.1| ornithine decarboxylase [Thermosipho africanus TCF52B]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 86/287 (29%), Gaps = 18/287 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+  +     N++    VK N+      +I   L + G   F V S  E 
Sbjct: 22  LVMDLEVVRDNYKRLVENVKNSKIYYAVKANS--H--IEILKLLRDLG-SYFDVASRPEI 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KL     +               I F       + +V       K+          +++
Sbjct: 77  EKLLSIGVEPERMSFGNTIKKSSDIAFAYEKGIKMFAVDSEMEIEKIAKNAPGSDIYVRI 136

Query: 129 DTG----------FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            T             + G S+  A+     +++  L  + +     +   +P +   +++
Sbjct: 137 STNGMEDDADWPLTKKFGTSVDHAISLVKYAYSLGLNPIGVSFHVGSQNYNPENWRVAIR 196

Query: 179 LERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTA 238
                   +   GIE  + ++ G +      +    P +           +  +   VT 
Sbjct: 197 EVSVVFEEARRMGIEMKMVNTGGGMPVK---YSKNIPTVEEISAVINEAIADYIGEDVTV 253

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
                      AG +++    +    +        G   G   T+  
Sbjct: 254 ILEPGRSMVGNAGTMITSVILRSQKGEEKWIYTDAGVFHGLTETIQN 300


>gi|169334999|ref|ZP_02862192.1| hypothetical protein ANASTE_01405 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257737|gb|EDS71703.1| hypothetical protein ANASTE_01405 [Anaerofustis stercorihominis DSM
           17244]
          Length = 354

 Score = 44.3 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 108/344 (31%), Gaps = 30/344 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           F ++KIDL  ++ N   +            A+ K    +      E IA  L   G    
Sbjct: 2   FPKIKIDLHGIRENTTRVCDKCKSIGIDVTAITKVFLAD------ENIAECLVTGGTTAL 55

Query: 61  FVTSVEEGVKLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS-C 118
             + +E    L+         +++      + + +   + + + S +  +   +K     
Sbjct: 56  GDSRIE---NLKNLGCFNMEKWLVRIPMESEIEDVIKYSDVSLNSEIKTIRLLNKEAYKQ 112

Query: 119 GVSHPYALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLACADD-PSSHVNS 176
             +H   L  D G  R G     + L         K  +L  I ++L C           
Sbjct: 113 DTTHKVILMADLGDLREGYFSTDDLLSDVDKVLQMKNIELYGIGTNLTCFGAIIPRPETL 172

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
            +L + +  I +   IE  + S      G +  + L   G  + G          +    
Sbjct: 173 QKLVKIKERIENDFDIELKVVSG-----GNSSSYTLVDRGEMIDGINSLRLGEVILLGNE 227

Query: 237 TAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFL 296
           T+    +         L +   + K      I    I      P  ++    + +     
Sbjct: 228 TSYGTPVEGLHHDNFILEAQIVELKEKPSVPIGEIGIDAFGNKPEFVNKGTMKRAIIAVG 287

Query: 297 GGKGFIKGYM-----VPILGKITMDMTMFDITDSLSI-EVGDYI 334
                I G       + ILG  + D T+ D+T+   I ++GD +
Sbjct: 288 KQDVRIDGMTPVDSDIEILGASS-DHTILDLTNVNKIYKLGDTV 330


>gi|115360046|ref|YP_777184.1| alanine racemase domain-containing protein [Burkholderia ambifaria
           AMMD]
 gi|115285334|gb|ABI90850.1| alanine racemase domain protein [Burkholderia ambifaria AMMD]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 11/170 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++NN   M A   +   +    VK       C+++  A   AG Q   V++++E 
Sbjct: 13  IDVDRMRNNIARMQAHLDALGVKFRPHVKT----TKCQQVVDAQIAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +  I          +       I   S              G    
Sbjct: 69  EQFFAAGVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLETANAIAEFGREHGERFD 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             ++VD   +R G+   +AL           G     +   A +      
Sbjct: 129 VWIEVDVDGHRSGIRPDDALLIDVGRALVDGGMALGGVLAHAGSSYEYDT 178


>gi|310658592|ref|YP_003936313.1| ornithine racemase [Clostridium sticklandii DSM 519]
 gi|226885219|emb|CAQ42981.1| ornithine racemase [Clostridium sticklandii DSM 519]
 gi|308825370|emb|CBH21408.1| ornithine racemase [Clostridium sticklandii]
          Length = 353

 Score = 44.3 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 11/66 (16%)

Query: 6  FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
          + ++ ID+  L++N   +  L   G  +TA VVK    N        I   L +  V  F
Sbjct: 2  YPKITIDINKLRDNATFIKNLCEKGGCKTALVVKSMCAN---HD---IVKELDSVEVDYF 55

Query: 61 FVTSVE 66
            + ++
Sbjct: 56 ADSRIQ 61


>gi|163854345|ref|YP_001628643.1| putative amino acid aldolase or racemase [Bordetella petrii DSM
          12804]
 gi|163258073|emb|CAP40372.1| putative amino acid aldolase or racemase [Bordetella petrii]
          Length = 379

 Score = 44.3 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 6/73 (8%)

Query: 7  LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L +DL A ++N   M A +           K       C +IA      G +      
Sbjct: 28 PSLVLDLDAFESNLRQMQAWADRHGVALRPHAKA----HKCPEIARRQLALGARGICCQK 83

Query: 65 VEEGVKLRLYTPQ 77
          V E +        
Sbjct: 84 VSEALPFVAAGID 96


>gi|66045783|ref|YP_235624.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
 gi|63256490|gb|AAY37586.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae B728a]
          Length = 397

 Score = 44.3 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 91/336 (27%), Gaps = 18/336 (5%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            +D   +  N    +         A+ K N        +  AL   G+  F V S+ E  
Sbjct: 44  TVDPRWITQNAQQFSGCFPGTVLYAM-KANP----LVHVLEALSQGGINHFDVASLAE-- 96

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            ++         V Y ++P + +                L    +L       P      
Sbjct: 97  -VQTVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTI 155

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLI 186
           + F R   S   A+      F       + ++  +A + D S   S     Q       +
Sbjct: 156 SMFVRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWL 215

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +A +  ++  +   +         ++  G T  +          +   +  L  
Sbjct: 216 AALDDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLK-DLNL 274

Query: 247 KALAGELVSYG----GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
              AG  + YG      + L+R         G   G       L                
Sbjct: 275 ICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYAGS 334

Query: 303 KGYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
                 I G     MD   F  + +  I  GD+++ 
Sbjct: 335 AEATFNIFGPTCDSMDRLAFPYSLASDIREGDWLEF 370


>gi|207721615|ref|YP_002252054.1| alanine racemase [Ralstonia solanacearum MolK2]
 gi|206586776|emb|CAQ17361.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum MolK2]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 55/174 (31%), Gaps = 13/174 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +   R    VK       CE +  A  +AG Q   V++++E 
Sbjct: 13  IDVARMTGNIARMQQRLDALGVRFRPHVKT----TKCEPVVRAQLDAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +      +  ++ + G+ P +                   S        +   + G + 
Sbjct: 69  EQFFAAGIRDIVYAV-GMAPTRLPQALALRRRGCDLKIVADSVACAQAIAAFGSAHGEAF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              ++VD   +R G+   +    +      + G     +   A +       ++
Sbjct: 128 EVWIEVDVDGHRSGIVPDDDRLISVGRVLAEGGMRLGGVLAHAGSSYEYHAHDA 181


>gi|167549636|ref|ZP_02343395.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205325432|gb|EDZ13271.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 367

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|62180930|ref|YP_217347.1| hypothetical protein SC2360 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128563|gb|AAX66266.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715409|gb|EFZ06980.1| Putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 367

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|16765685|ref|NP_461300.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56412745|ref|YP_149820.1| hypothetical protein SPA0506 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|167993046|ref|ZP_02574141.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168229734|ref|ZP_02654792.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168242483|ref|ZP_02667415.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168261619|ref|ZP_02683592.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168465931|ref|ZP_02699801.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194444323|ref|YP_002041622.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194448158|ref|YP_002046414.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194469314|ref|ZP_03075298.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197262878|ref|ZP_03162952.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197361679|ref|YP_002141315.1| hypothetical protein SSPA0470 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198242172|ref|YP_002216431.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|200388455|ref|ZP_03215067.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204929244|ref|ZP_03220387.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205353473|ref|YP_002227274.1| hypothetical protein SG2387 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857776|ref|YP_002244427.1| hypothetical protein SEN2340 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224583153|ref|YP_002636951.1| hypothetical protein SPC_1348 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238912362|ref|ZP_04656199.1| hypothetical protein SentesTe_14691 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16420901|gb|AAL21259.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56127002|gb|AAV76508.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194402986|gb|ACF63208.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406462|gb|ACF66681.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455678|gb|EDX44517.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195631333|gb|EDX49893.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197093155|emb|CAR58599.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197241133|gb|EDY23753.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197936688|gb|ACH74021.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199605553|gb|EDZ04098.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204321788|gb|EDZ06987.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205273254|emb|CAR38217.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205328822|gb|EDZ15586.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205335650|gb|EDZ22414.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205338419|gb|EDZ25183.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205349583|gb|EDZ36214.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206709579|emb|CAR33924.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467680|gb|ACN45510.1| hypothetical protein SPC_1348 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247564|emb|CBG25391.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994459|gb|ACY89344.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301158916|emb|CBW18429.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913349|dbj|BAJ37323.1| hypothetical protein STMDT12_C23800 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321222940|gb|EFX48011.1| Putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322617103|gb|EFY14009.1| hypothetical protein SEEM315_08805 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322617591|gb|EFY14490.1| hypothetical protein SEEM971_01889 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624779|gb|EFY21608.1| hypothetical protein SEEM973_01357 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630329|gb|EFY27099.1| hypothetical protein SEEM974_07706 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634509|gb|EFY31242.1| hypothetical protein SEEM201_19711 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322639220|gb|EFY35912.1| hypothetical protein SEEM202_08999 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640083|gb|EFY36750.1| hypothetical protein SEEM954_16279 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645697|gb|EFY42221.1| hypothetical protein SEEM054_15998 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322652061|gb|EFY48424.1| hypothetical protein SEEM675_01167 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656233|gb|EFY52530.1| hypothetical protein SEEM965_15354 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659385|gb|EFY55632.1| hypothetical protein SEEM19N_01703 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665845|gb|EFY62028.1| hypothetical protein SEEM801_10366 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669916|gb|EFY66057.1| hypothetical protein SEEM507_14210 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673901|gb|EFY69998.1| hypothetical protein SEEM877_08579 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678660|gb|EFY74716.1| hypothetical protein SEEM867_09322 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683545|gb|EFY79559.1| hypothetical protein SEEM180_09966 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687620|gb|EFY83590.1| hypothetical protein SEEM600_13387 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323130690|gb|ADX18120.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323193545|gb|EFZ78750.1| hypothetical protein SEEM581_00860 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198452|gb|EFZ83554.1| hypothetical protein SEEM501_10272 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204564|gb|EFZ89567.1| hypothetical protein SEEM460_00150 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208498|gb|EFZ93437.1| hypothetical protein SEEM020_08866 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213635|gb|EFZ98424.1| hypothetical protein SEEM6152_06983 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218329|gb|EGA03039.1| hypothetical protein SEEM0077_15566 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222916|gb|EGA07265.1| hypothetical protein SEEM0047_18987 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224509|gb|EGA08791.1| hypothetical protein SEEM0055_20206 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323232324|gb|EGA16427.1| hypothetical protein SEEM0052_09396 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235642|gb|EGA19726.1| hypothetical protein SEEM3312_11961 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323241198|gb|EGA25234.1| hypothetical protein SEEM5258_16684 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244940|gb|EGA28942.1| hypothetical protein SEEM1156_21517 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323250059|gb|EGA33953.1| hypothetical protein SEEM9199_06316 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253843|gb|EGA37668.1| hypothetical protein SEEM8282_06759 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323254980|gb|EGA38771.1| hypothetical protein SEEM8283_18395 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259833|gb|EGA43465.1| hypothetical protein SEEM8284_18670 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264146|gb|EGA47653.1| hypothetical protein SEEM8285_16403 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270844|gb|EGA54282.1| hypothetical protein SEEM8287_08645 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326624183|gb|EGE30528.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326628566|gb|EGE34909.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332989291|gb|AEF08274.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 367

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|33599435|ref|NP_886995.1| putative metal-activated pyridoxal enzyme [Bordetella
           bronchiseptica RB50]
 gi|33567031|emb|CAE30944.1| putative metal-activated pyridoxal enzyme [Bordetella
           bronchiseptica RB50]
          Length = 381

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 52/172 (30%), Gaps = 11/172 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +D+  +++N   M              VK       C  +A A   AG +   V++++
Sbjct: 17  AIVDVARMQHNIARMQDRMNGLGVSLRPHVKT----SKCTPVALAQLAAGARGVTVSTLK 72

Query: 67  EGVKLRLYTPQARIF---VLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMSCGVS 121
           E  +         ++   +     P    +        I   ++    T      +    
Sbjct: 73  EAEQFFAAGIADILYAVGMAEHRLPAALALRRRGCDLKIITDNAESARTIADFGRAHDEV 132

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               +++DT  +R G+  +EA      +   + G     +   A +      
Sbjct: 133 FEVWIEIDTDGHRSGIKPEEAALLAVGAALHEGGMRLGGVMTHAGSSYDLDT 184


>gi|119716914|ref|YP_923879.1| alanine racemase domain-containing protein [Nocardioides sp. JS614]
 gi|119537575|gb|ABL82192.1| alanine racemase domain protein [Nocardioides sp. JS614]
          Length = 360

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 45/146 (30%), Gaps = 22/146 (15%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L++D+  L+ N       +         +A+T               IA     AG    
Sbjct: 13  LRVDVARLRANIERTTRWAAAGGVSLRPHAKT----------HKSPDIARLQLAAGAIGL 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQ----EKIIFDTNLIPVISSVPQLTFYSKLM 116
            V ++ E      +  +                  + + D   + +     +    +  +
Sbjct: 63  TVATIGEAEVFVEHGAEDVFVAYPLWLTENGARRLRDLADRADLAIGVDSAEGARLAARL 122

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEA 142
             G      ++VD+G +R G+  ++A
Sbjct: 123 LEGSGVVALVEVDSGQHRSGVDAEDA 148


>gi|46117817|ref|XP_384835.1| hypothetical protein FG04659.1 [Gibberella zeae PH-1]
          Length = 366

 Score = 44.3 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 91/378 (24%), Gaps = 64/378 (16%)

Query: 7   LRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             + +DL  ++ N   +    L         +K          IA  L  AG +   V  
Sbjct: 16  PSMIVDLDVMEANIKKLMDRLLPTGRNIRPHLKT----TKSAIIAKKLVAAGAKGGCVAK 71

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV---- 120
           + E   +        +     + P + + + +         +      +           
Sbjct: 72  LSEAEAITAAGFTDLLITCEIVGPAKVRRLVELFKKHQDLRIVVDDADAATAINNALANS 131

Query: 121 ----SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
                    + +D G +R G+  + AL    +    K  +L  +  +           + 
Sbjct: 132 GSQDPINVLIDLDVGLHRTGVKPEGALPLARHIDTLKQMRLIGVQGY---------EGHL 182

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
             L  F+            L  ++  L      F +        G  D    + P  T +
Sbjct: 183 QHLHDFQDRKEQCLESMRILTETAQEL--KKEGFNIEVVTTGGTGTADFC-ATVPGVTEL 239

Query: 237 TAEARIILIRKALAGELVSYGG------QKKLTRDSLIAVAAIGYAD-----GYPLTLSG 285
              + I +           Y             +         G        G       
Sbjct: 240 QPGSFIFMDTDYRNAIGAYYSHSLSFLATVVSKQGERQVTIDTGLKTLTTDSGLSECKDQ 299

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPDIKLDD 345
               +      G   + +G                      S++VGD +++    I    
Sbjct: 300 RYVYNQLGDEHGSLNWEEGT--------------------PSLKVGDRVEMIPSHIDPTV 339

Query: 346 ------VALASGTTNYDL 357
                  A  +GT   ++
Sbjct: 340 NLHDYYYAHRNGTIE-EI 356


>gi|83747285|ref|ZP_00944327.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|207744276|ref|YP_002260668.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum IPO1609]
 gi|83726109|gb|EAP73245.1| Alanine racemase [Ralstonia solanacearum UW551]
 gi|206595681|emb|CAQ62608.1| ipr001608 alanine racemase, n-terminal protein [Ralstonia
           solanacearum IPO1609]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 13/174 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +   R    VK       CE +  A   AG Q   V++++E 
Sbjct: 13  IDVARMTGNIARMQQRLDALGVRFRPHVKT----TKCEPVVRAQLAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +      +  ++ + G+ P +                   S        +   + G + 
Sbjct: 69  EQFFAAGIRDIVYAV-GMAPTRLPQALALRRRGCDLKIVADSVACAQAIAAFGSAHGEAF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              ++VD   +R G+   +           + G     +   A +       ++
Sbjct: 128 EVWIEVDVDGHRSGIVPDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEYHAHDA 181


>gi|256389571|ref|YP_003111135.1| alanine racemase domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256355797|gb|ACU69294.1| alanine racemase domain protein [Catenulispora acidiphila DSM
           44928]
          Length = 352

 Score = 43.9 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 85/279 (30%), Gaps = 24/279 (8%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKD-NAYGLGCEKIAPA---LYNAGVQDFFV 62
           L L ID    + +   +  L+ +     V K  N YG+G   +  A   L  AGV+   V
Sbjct: 3   LTLHIDAERWRAHQDEV--LARHPDLVPVAKGVNGYGIGIPNLMQAASKLAAAGVEITAV 60

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +  E  + + +    R+ VL     G++       +I  ++SV  +          +  
Sbjct: 61  GTAAEAEQAKDH-YSGRLLVLTPYLIGEDVRDLPDRVIRTVASVEAVEAL-------LGR 112

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              + + T   R GL  Q+         +                  P   V    L   
Sbjct: 113 RVVIDLMTSMRRFGLEKQDIPRLHAALES------DQARVEGFSVHMPLDRVAGDYLREV 166

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKIN--KSHPMQTVVTAEA 240
              +         + +     L P+    L +          +I        +  + A  
Sbjct: 167 SDWVDALVAAGIPVRTLFVSHLSPDEISTLAKR-HQGTTVRPRIGTQLWLGDRKALQARG 225

Query: 241 RIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGY 279
            +  ++K   G+   Y    K   D  + V + G A G 
Sbjct: 226 TVHSVQKVSKGDRFGYRQ-HKARGDGHLLVVSGGTAHGV 263


>gi|282863342|ref|ZP_06272401.1| alanine racemase domain protein [Streptomyces sp. ACTE]
 gi|282561677|gb|EFB67220.1| alanine racemase domain protein [Streptomyces sp. ACTE]
          Length = 343

 Score = 43.9 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 100/325 (30%), Gaps = 44/325 (13%)

Query: 32  TAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQE 91
              V K N YG G E++A      G     V +  E  +++ +     + VL     G+E
Sbjct: 26  LVPVCKGNGYGFGHERLADETIRFGSDILAVGTTYEAARIKDW-FSGDLLVLTPFRRGEE 84

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFN 151
            +     ++  +SSV         +   V     ++  +   R G+  +E          
Sbjct: 85  PVPLPDRVVRSVSSV-------DGVHALVGARVVIECMSSMKRHGVKEEELGLL---HAA 134

Query: 152 KKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASS-------SGILL 204
            +  +L     HL       S      +     L +    +     S             
Sbjct: 135 IEDVRLEGFALHLPLDRTDGSDAVEEVIAWMDRLRAARLPLHTMFVSHLRAEELARLQQQ 194

Query: 205 GPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTR 264
            P   F+         G  +                 ++ +   + G+   Y  QK  + 
Sbjct: 195 FPQTRFRARIGTRLWLGDHEATE----------YRGAVLDVTPVVKGDRFGYRQQKAAS- 243

Query: 265 DSLIAVAAIGYADGY----PLTLSGLDSEHSPSVFLGGKGFIKGYMVPIL--GK------ 312
           D  + V A G + G     P  L G+    +  V   G   +   + P +  GK      
Sbjct: 244 DGWLVVVAGGTSHGVGLEAPKALHGVMP-RAKGVARAGLATVNRNLSPFVWAGKQRWFAE 302

Query: 313 -ITMDMTMFDI-TDSLSIEVGDYIQ 335
              M +++  + +D+   +VGD + 
Sbjct: 303 PPHMQVSILFVPSDAEEPKVGDELV 327


>gi|262201693|ref|YP_003272901.1| alanine racemase domain-containing protein [Gordonia bronchialis
          DSM 43247]
 gi|262085040|gb|ACY21008.1| alanine racemase domain protein [Gordonia bronchialis DSM 43247]
          Length = 360

 Score = 43.9 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 12/86 (13%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +D   L+ N   +   + +A        K       C +IA      G     V +V 
Sbjct: 10 LVVDDERLEANLARVADRARDAGVLVRPHAKT----HKCVEIARRQIAHGAAGLTVATVG 65

Query: 67 EGV------KLRLYTPQARIFVLYGI 86
          E        ++R       ++V   +
Sbjct: 66 EAEVFAAVDEVREIFIAYPLWVTPAM 91


>gi|161612907|ref|YP_001586872.1| hypothetical protein SPAB_00613 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362271|gb|ABX66039.1| hypothetical protein SPAB_00613 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 367

 Score = 43.9 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +  AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++              +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPAVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|229002622|ref|ZP_04160659.1| Alanine racemase domain protein [Bacillus mycoides Rock3-17]
 gi|229008034|ref|ZP_04165588.1| Alanine racemase domain protein [Bacillus mycoides Rock1-4]
 gi|228753216|gb|EEM02700.1| Alanine racemase domain protein [Bacillus mycoides Rock1-4]
 gi|228758502|gb|EEM07643.1| Alanine racemase domain protein [Bacillus mycoides Rock3-17]
          Length = 361

 Score = 43.9 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 60/343 (17%), Positives = 111/343 (32%), Gaps = 31/343 (9%)

Query: 11  IDLTALKNNWHSMNALSGNART--AAVVKDNAYGLG---CEKIAPALYNAGVQDFFVTSV 65
           I+L+ LK+N   +  L  +A      V K      G     ++   L  AG   F  + +
Sbjct: 3   INLSKLKHNAIMIKRLCEHANVSCFPVTK------GVSAATEVIEILKEAGFTKFADSRL 56

Query: 66  EEGVKLRLYTPQARIFVLYGIHP-GQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSHP 123
           +   K+R     +   +L       + +    T  I + S +  +    +  +  G  H 
Sbjct: 57  QHLHKIRKMMGNSVELLLIRTPALSEVEETVLTADISLNSELCVIEALGRAATKYGKIHR 116

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLERF 182
             L +D G  R G+  Q+ ++ +      +  +L  I ++  C +    +  + ++L + 
Sbjct: 117 VILMIDLGDLREGMLPQQMVEVSQRVVGIQGIELVGIGANFTCFSGVIPTESSLLELTQL 176

Query: 183 RTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARI 242
             L+    G   S+ S       P    Q    G        +                +
Sbjct: 177 TELVEEKIGQPLSIISGGNSSSLP-LILQRKEIGRVNSLRIGEAIFLGKETAYGKNIPFM 235

Query: 243 ILIRKALAGELVSYGGQKKLTR----DSLIAVAAIGYADGYPL----TLSGLDSEHSPSV 294
                 +  E++    +  + R     +           G  L     +   D + S   
Sbjct: 236 YQDIFLVEAEIIEVKRKPSMPRGVIGKNAFGQVPCFEEKGERLRAIVAIGRQDLDISGLY 295

Query: 295 FLGGKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
            L G   I G      G  + D  + DITDS +  VGD I   
Sbjct: 296 PLDGHIEILG------G--SSDHLIVDITDSKTYRVGDIITFL 330


>gi|241766468|ref|ZP_04764338.1| alanine racemase domain-containing protein [Acidovorax
          delafieldii 2AN]
 gi|241363320|gb|EER58850.1| alanine racemase domain-containing protein [Acidovorax
          delafieldii 2AN]
          Length = 85

 Score = 43.9 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 18/73 (24%)

Query: 7  LRLKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
            L +DL A++ N   M   +         +A+               +IA  L  AG  
Sbjct: 22 PSLVVDLDAMERNIQRMADFARKHRVRWRPHAKM----------HKSAEIALLLQQAGAT 71

Query: 59 DFFVTSVEEGVKL 71
             V  V E   L
Sbjct: 72 GACVQKVAEAEAL 84


>gi|317127511|ref|YP_004093793.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315472459|gb|ADU29062.1| alanine racemase domain protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 367

 Score = 43.9 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 52/166 (31%), Gaps = 11/166 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN-ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +D   L  N   M  +S +        K          IA      G     V +  E
Sbjct: 12  LILDEKKLNKNIDRMMKVSEHGVTIRPHFKT----HKSVWIAKRQIEKGASGITVATASE 67

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL----IPVISSVPQLTFYSKLMSCGVSHP 123
              L        +       P + K +   +     I  + S  Q+     +    +  P
Sbjct: 68  AELLFENGLTDILLAFPLADPVRLKKLLKWSKRARLILTVDSEEQVKIIEAIAKELIVTP 127

Query: 124 Y-ALQVDTGFNRLGLSLQ-EALDFTHNSFNKKLGQLSLIISHLACA 167
              ++V++G NR G+    EA +      N +   L+ + +H   +
Sbjct: 128 EVWIKVNSGLNRCGVEPGVEAFNLAECINNTETLDLTGMYTHAGHS 173


>gi|90577958|ref|ZP_01233769.1| threonine aldolase, low-specificity [Vibrio angustum S14]
 gi|90441044|gb|EAS66224.1| threonine aldolase, low-specificity [Vibrio angustum S14]
          Length = 368

 Score = 43.9 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 31/119 (26%), Gaps = 8/119 (6%)

Query: 1   MHSNEFLR--LKIDLTALKNNWHSMNALSGNART--AAVVKDNAYGLGCEKIAPALYNAG 56
           M+  +     L +D   +KNN H M       +       K          IA    +AG
Sbjct: 1   MNIAQLPTPALIVDFDKMKNNIHEMQQRIDALQLNLRPHTKA----HKSPTIAKMQIDAG 56

Query: 57  VQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKL 115
            Q      + E   +        +         + + +             Q+  + + 
Sbjct: 57  AQGICTAKLGEAEVMAAGGINDILITTPIAGKNKIQRLVKLYQQYPDYRFIQVIDHKQH 115


>gi|154251070|ref|YP_001411894.1| alanine racemase domain-containing protein [Parvibaculum
          lavamentivorans DS-1]
 gi|154155020|gb|ABS62237.1| alanine racemase domain protein [Parvibaculum lavamentivorans
          DS-1]
          Length = 381

 Score = 43.9 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 22/77 (28%), Gaps = 18/77 (23%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L +DL A + N   M             +A+T            C  IA A   AG    
Sbjct: 27 LVLDLDAFERNVARMAEHCKVSNLSIRPHAKT----------HKCVTIAKAQIAAGAVGQ 76

Query: 61 FVTSVEEGVKLRLYTPQ 77
              + E   +     +
Sbjct: 77 CCAKLGEAEAMAAGGIE 93


>gi|330971195|gb|EGH71261.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 371

 Score = 43.9 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 91/336 (27%), Gaps = 18/336 (5%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            +D   +  N    +         A+ K N        +  AL   G+  F V S+ E  
Sbjct: 18  TVDPRWITQNAQQFSGGFPGTVLYAM-KANP----LVHVLEALSQGGINHFDVASLAE-- 70

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            ++         V Y ++P + +                L    +L       P      
Sbjct: 71  -VQTVHNTLPNAVQYLMNPVKSRHCLHEAYYRHGVRSFVLDSEEELSKLRDVLPERDSTI 129

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLI 186
           + F R   S   A+      F       + ++  +A + D S   S     Q       +
Sbjct: 130 SMFVRYAPSESTAVYDLRGKFGASPALATQLVHQVAASTDWSLGLSFHVGSQAIEDGPWL 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +A +  ++  +   +         ++  G T  +          +   +  L  
Sbjct: 190 AALDDADAIVRDTAQHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCEHIQTSPTLK-DLNL 248

Query: 247 KALAGELVSYG----GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
              AG  + YG      + L+R         G   G       L                
Sbjct: 249 ICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYSGS 308

Query: 303 KGYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
                 I G     MD   F  T +  I  GD+++ 
Sbjct: 309 AETTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEF 344


>gi|170744100|ref|YP_001772755.1| alanine racemase domain-containing protein [Methylobacterium sp.
           4-46]
 gi|168198374|gb|ACA20321.1| alanine racemase domain protein [Methylobacterium sp. 4-46]
          Length = 359

 Score = 43.9 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 41/148 (27%), Gaps = 12/148 (8%)

Query: 11  IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           IDL  ++ N   + A    A  A    +K          +A     AG +     ++ E 
Sbjct: 19  IDLDRVERNIARLQAACDAAGLANRPHIKT----HKSPVLARMQREAGARGLTCQTLGEA 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQE-----KIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
             +        +     + P +       +      +                + G    
Sbjct: 75  EVMAEAGLDDILISYNLVGPEKLGRLARLLRRTALTVSADHPAVVAGLGEAAAAAGRPLA 134

Query: 124 YALQVDTGFNRLGL-SLQEALDFTHNSF 150
             ++ DTG  R G+   +EA+       
Sbjct: 135 VMVECDTGRARAGVARPEEAVALARQIA 162


>gi|197251372|ref|YP_002147319.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197215075|gb|ACH52472.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
          Length = 367

 Score = 43.9 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N     AL  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARMEKALLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|256752935|ref|ZP_05493765.1| alanine racemase domain protein [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|256748180|gb|EEU61254.1| alanine racemase domain protein [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 167

 Score = 43.5 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 14/167 (8%)

Query: 6   FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
           +  L+I+L  L+ N  ++  L    N +   V K            ++A  +   GV+  
Sbjct: 2   YPLLRINLVKLRENTQTIVNLCEKKNIKVVGVTKVFCA------IPEVAQTMVKGGVEIL 55

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + ++   KL          +L      + + +     I + S +  +     +     
Sbjct: 56  GDSRIKNLKKL--QHIPVPKMLLRIPMKSEVEEVIKYADISLNSEIDTIKSLSEEAKKQR 113

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
             H   L VD G  R G+  ++ +         +  +L  I ++L C
Sbjct: 114 KIHEIILMVDLGDLREGVLKEDVIPIVEQIVKLEGIRLRGIGTNLTC 160


>gi|269140447|ref|YP_003297148.1| hypothetical protein ETAE_3106 [Edwardsiella tarda EIB202]
 gi|267986108|gb|ACY85937.1| hypothetical protein ETAE_3106 [Edwardsiella tarda EIB202]
 gi|304560239|gb|ADM42903.1| Putative cytoplasmic protein [Edwardsiella tarda FL6-60]
          Length = 367

 Score = 43.5 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+IDL  L++N  +   L G       AV K      GC + A A+   G++    +
Sbjct: 3   MPTLEIDLRKLRDNARTEVTLLGEQGIEVMAVNKVFD---GCPETARAVVEGGIRVVAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E+++   ++             ++ +     H 
Sbjct: 60  RTYNLKKIRATGCT-TCLLRSPCLSEIEEVVRYADISLNSEPAVLRALSAEALRQDKVHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+  +      
Sbjct: 119 VLLMVDMGDLREGIWFEHYAQIL 141


>gi|317401723|gb|EFV82343.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans C54]
          Length = 379

 Score = 43.5 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 6/73 (8%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L +DL A + N  +M A +     A     K       C +IA      G +      
Sbjct: 27 PSLVLDLAAFEANLRAMQAWADRHEVALRPHAKA----HKCPEIARRQLALGARGICCQK 82

Query: 65 VEEGVKLRLYTPQ 77
          V E V        
Sbjct: 83 VSEAVPFVAAGIT 95


>gi|85715888|ref|ZP_01046866.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A]
 gi|85697295|gb|EAQ35175.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter sp. Nb-311A]
          Length = 380

 Score = 43.5 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       ++   L + G   F   +V E
Sbjct: 23 LVVDLDIVRDNYQTFAKALPDSRVFYAVKANP----APEVLSLLASLG-SCFDTATVAE 76


>gi|217076401|ref|YP_002334117.1| amino acid racemase [Thermosipho africanus TCF52B]
 gi|217036254|gb|ACJ74776.1| amino acid racemase [Thermosipho africanus TCF52B]
          Length = 358

 Score = 43.5 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 5   EFLRLKIDLTALKNN----WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           +F +L ++L  ++ N      +++ L  N    AV K     LG   IA  L +AGV   
Sbjct: 2   DFPKLFVNLKKIRENAEKLLETLSKL--NIELVAVTKLT---LGDPIIAKTLKDAGVIKL 56

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-SKLMSCG 119
             + ++   ++          +L    P + +         +IS                
Sbjct: 57  GESRLKNIKRMIENNVPGPFQLLRIPMPSELEDAVLLTDEILISEEKVAYMIDEIAKKYD 116

Query: 120 VSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLG 155
            +      +D G  R G+  ++A         K   
Sbjct: 117 KNIELIYMIDVGDLREGIWYEKAAYTIEKVAKKLKM 152


>gi|50059365|gb|AAT69406.1| alanine racemase [Borrelia burgdorferi]
          Length = 61

 Score = 43.5 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 12/31 (38%)

Query: 23 MNALSGNARTAAVVKDNAYGLGCEKIAPALY 53
          +    G     A +K +AYG G   I   L 
Sbjct: 27 IKNKIGEKEIVATLKGDAYGHGLINIFKFLK 57


>gi|307686808|ref|ZP_07629254.1| alanine racemase [Clostridium cellulovorans 743B]
          Length = 94

 Score = 43.5 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 2/92 (2%)

Query: 45  CEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS 104
              IA  L N       V  + E + LR    +  I ++  I P Q   I   ++ P++ 
Sbjct: 1   MIPIANELINYNSDALGVVRLSEALTLRKAGIKIPIMIISPIMPSQTSWIITHDITPMVD 60

Query: 105 SVPQLTFYSKLMSCGVSHP--YALQVDTGFNR 134
           +   +    K  +             D   NR
Sbjct: 61  NEEIIKALDKCAAEKNEIVSLKGFPGDIFMNR 92


>gi|154246083|ref|YP_001417041.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
 gi|154160168|gb|ABS67384.1| Orn/DAP/Arg decarboxylase 2 [Xanthobacter autotrophicus Py2]
          Length = 376

 Score = 43.5 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 39/147 (26%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDN----------------------------A 40
           + +DL  ++ N+ +      + R    VK N                            A
Sbjct: 19  VVVDLDVVRTNYQAFARALPDTRVYYAVKANPDAAILQALEELGSSFDCASVGEIEMVLA 78

Query: 41  YGLGCEKIA-----------PALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG 89
            G G E+I+              +  GV+ F V S EE  K+    P A++F        
Sbjct: 79  TGAGAERISFGNTIKKERDIERAFRLGVRLFAVDSYEEAEKIARVAPHAKVFCRILCDGA 138

Query: 90  QEKIIFDTNLIPVISSVPQLTFYSKLM 116
             +                +  ++  +
Sbjct: 139 GAEWPLSRKFGCEPEMAADVLEHAHRL 165


>gi|254472752|ref|ZP_05086151.1| alanine racemase domain protein [Pseudovibrio sp. JE062]
 gi|211958216|gb|EEA93417.1| alanine racemase domain protein [Pseudovibrio sp. JE062]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 21/97 (21%), Gaps = 19/97 (19%)

Query: 9   LKIDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAG-VQD 59
           L +DL A  +N   M             + +               +IA      G    
Sbjct: 30  LIVDLDAFDHNLFKMRDEIARYGVRHRAHCKM----------HKSAEIAKLQMEQGHACG 79

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
                V E   L        +       P +   +  
Sbjct: 80  VCCQKVSEAEALARAGITDIMVSNEVCDPYKIDRLAQ 116


>gi|158422357|ref|YP_001523649.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571]
 gi|158329246|dbj|BAF86731.1| putative amino acid aldolase [Azorhizobium caulinodans ORS 571]
          Length = 369

 Score = 43.5 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 25/82 (30%), Gaps = 6/82 (7%)

Query: 9  LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +DL A + N  +M AL     A+  A  K          IA      G     V  V 
Sbjct: 21 LILDLDAFEANLDTMAALLKPTGAKLRAHAKT----HKSAVIARLQMQRGAVGQCVQKVG 76

Query: 67 EGVKLRLYTPQARIFVLYGIHP 88
          E   L        +     + P
Sbjct: 77 EAEALAQAGINDILVSNEVVEP 98


>gi|317050118|ref|YP_004117766.1| alanine racemase domain-containing protein [Pantoea sp. At-9b]
 gi|316951735|gb|ADU71210.1| alanine racemase domain protein [Pantoea sp. At-9b]
          Length = 381

 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 22/64 (34%), Gaps = 6/64 (9%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L+ID   L+ N   M   +  A  A    +K          IA      G +   V+   
Sbjct: 23 LEIDAARLQRNLQQMQQKADAAGVALRPHIKT----HKSVWIAQQQRALGARGVTVSKPS 78

Query: 67 EGVK 70
          EGV 
Sbjct: 79 EGVA 82


>gi|92118880|ref|YP_578609.1| ornithine decarboxylase [Nitrobacter hamburgensis X14]
 gi|91801774|gb|ABE64149.1| ornithine decarboxylase [Nitrobacter hamburgensis X14]
          Length = 380

 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++R    VK N       ++   L + G   F   +V E 
Sbjct: 23  LVVDLDVVRDNYQTFAKALPDSRVFYAVKANP----APEVLSLLASLG-SCFDTATVAE- 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTN 98
           +++ L        V +G    +E+ I    
Sbjct: 77  IEMALAAGATPDRVSFGNTIKKERDIARAY 106


>gi|308188666|ref|YP_003932797.1| hypothetical protein Pvag_3206 [Pantoea vagans C9-1]
 gi|308059176|gb|ADO11348.1| Uncharacterized protein [Pantoea vagans C9-1]
          Length = 393

 Score = 43.1 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 6/82 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           +++D   L+ N   M   +     A    +K          IA      G Q   V+   
Sbjct: 35  IEVDAERLEQNLQHMQRKASATGVALRPHIKT----HKSVWIAQRQLEYGAQGVTVSKPS 90

Query: 67  EGVKLRLYTPQARIFVLYGIHP 88
           EG+       +  +     + P
Sbjct: 91  EGISFIQGGVRDLLLAYPVVQP 112


>gi|103488650|ref|YP_618211.1| threonine aldolase family protein [Sphingopyxis alaskensis
          RB2256]
 gi|98978727|gb|ABF54878.1| threonine aldolase family protein [Sphingopyxis alaskensis
          RB2256]
          Length = 381

 Score = 43.1 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 21/72 (29%), Gaps = 6/72 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +D  AL  N   M AL+  A  A     K          IA    +AG        + 
Sbjct: 26 LILDREALDRNIARMAALTKAAGVALRPHAKT----HKSVDIARRQLDAGAVGVCCAKIG 81

Query: 67 EGVKLRLYTPQA 78
          E   L       
Sbjct: 82 EAEILADGGITG 93


>gi|94985418|ref|YP_604782.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM
           11300]
 gi|94555699|gb|ABF45613.1| carboxynorspermidine decarboxylase [Deinococcus geothermalis DSM
           11300]
          Length = 408

 Score = 43.1 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 6/124 (4%)

Query: 12  DLTALKNNWHSMN--ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D + L+ N   ++    +  A+     K  A       + P L   G+     +S+ E +
Sbjct: 30  DESRLRRNLALISAVQRASGAQIIVAFKGFA----MWSVFPLLREYGITGATASSLNEAI 85

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
             R                     I D     V +S  Q   +   +    +   AL V 
Sbjct: 86  LAREELQGEVHVYAPAYSEEDFPRILDLADHIVFNSFAQWERFRPQVEAARAAGKALHVG 145

Query: 130 TGFN 133
              N
Sbjct: 146 LRIN 149


>gi|269837824|ref|YP_003320052.1| alanine racemase domain-containing protein [Sphaerobacter
          thermophilus DSM 20745]
 gi|269787087|gb|ACZ39230.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM
          20745]
          Length = 370

 Score = 43.1 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 18/88 (20%)

Query: 9  LKIDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L ID  A++ N   M          L  +A+T               IA     AG    
Sbjct: 21 LVIDADAMERNIARMAAFFAERPAKLRPHAKT----------HKSPIIAHKQLEAGAVGI 70

Query: 61 FVTSVEEGVKLRLYTPQARIFVLYGIHP 88
              + E   L     +  +     + P
Sbjct: 71 TCAKLGEAEALVEGGIKDILIANQIVGP 98


>gi|225012998|ref|ZP_03703415.1| alanine racemase domain protein [Flavobacteria bacterium MS024-2A]
 gi|225002897|gb|EEG40876.1| alanine racemase domain protein [Flavobacteria bacterium MS024-2A]
          Length = 369

 Score = 43.1 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 40/146 (27%), Gaps = 12/146 (8%)

Query: 16  LKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
           +K N  +M +++G   R    +K         ++     + G++ F   ++ E   L   
Sbjct: 27  VKKNISAMISIAGGTERLWPHIKT----HKMGEVVKLQMDQGIKRFKCATLGEVELLISC 82

Query: 75  TPQARIFVLYGIHPGQEKI---IFDTNLIPVISSVPQLTFYSKLM----SCGVSHPYALQ 127
                +      H               I   + V                       + 
Sbjct: 83  NVSHILLAHQPTHEKVMYFLSLQAKNPNIRFSTLVDNYDSLELYSDLATQENQKLSLWID 142

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKK 153
           ++ G NR G+  + AL        K 
Sbjct: 143 INNGMNRTGILPELALSLYQRLIKKN 168


>gi|168237383|ref|ZP_02662441.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194736497|ref|YP_002115429.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194711999|gb|ACF91220.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197289614|gb|EDY28977.1| amino acid racemase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 367

 Score = 43.1 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 6/143 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
              L+I+L  L+ N  +   L  S      AV K      GC + A A++N G+     +
Sbjct: 3   MPVLEINLRKLEENARTEKTLLASSGIDVMAVNKVFD---GCVETAQAVFNGGITVIAES 59

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                 K+R         +        E ++   ++      V       +    G +H 
Sbjct: 60  RTYNLKKIRETGCT-TCLLRSPCLSEIEDVVRYADISLNSEPVVLRALSQEAQRQGKTHQ 118

Query: 124 YALQVDTGFNRLGLSLQEALDFT 146
             L VD G  R G+   E     
Sbjct: 119 VLLMVDMGDLREGIWFGEYQRIL 141


>gi|75675117|ref|YP_317538.1| Orn/DAP/Arg decarboxylase 2 [Nitrobacter winogradskyi Nb-255]
 gi|74419987|gb|ABA04186.1| ornithine decarboxylase [Nitrobacter winogradskyi Nb-255]
          Length = 380

 Score = 43.1 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       ++   L + G   F   +V E
Sbjct: 23 LVVDLDIVRDNYQAFAKALPDSRVFYAVKANP----APEVLSLLASLG-SCFDTATVAE 76


>gi|300703088|ref|YP_003744690.1| hypothetical protein RCFBP_10743 [Ralstonia solanacearum CFBP2957]
 gi|299070751|emb|CBJ42046.1| conserved protein of unknown function, Alanine racemase domain
           protein [Ralstonia solanacearum CFBP2957]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 53/185 (28%), Gaps = 13/185 (7%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAG 56
           MH          ID+  +  N   M     +   R    VK       CE +  A  +AG
Sbjct: 1   MHLPALNTPAALIDVARMTGNIARMQQRLDALGVRFRPHVKT----TKCEPVVRAQLDAG 56

Query: 57  VQDFFVTSVEEGVK-----LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF 111
            Q   V++++E  +     LR       +           +       I   S       
Sbjct: 57  AQGITVSTLKEAEQFFAAGLRDIVYAVGMAPTRLPQALALRRRGCDLKIVADSVACAQAI 116

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
            +   + G +    ++VD   +R G+   +           + G     +   A +    
Sbjct: 117 AAFGNTHGEAFEVWIEVDVDGHRSGIVPDDDRLIAVGRVLAEGGMRLGGVLAHAGSSYEY 176

Query: 172 SHVNS 176
              ++
Sbjct: 177 HAHDA 181


>gi|319761308|ref|YP_004125245.1| alanine racemase domain protein [Alicycliphilus denitrificans BC]
 gi|330823182|ref|YP_004386485.1| alanine racemase domain-containing protein [Alicycliphilus
           denitrificans K601]
 gi|317115869|gb|ADU98357.1| alanine racemase domain protein [Alicycliphilus denitrificans BC]
 gi|329308554|gb|AEB82969.1| alanine racemase domain protein [Alicycliphilus denitrificans K601]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 24/89 (26%), Gaps = 18/89 (20%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             IDL A++ N   M A +         +A+                IA  L  AG    
Sbjct: 22  AVIDLDAMERNIQRMAAFARQNQVRWRPHAKM----------HKSAAIALLLEQAGACGH 71

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPG 89
            V    E   L     +        I P 
Sbjct: 72  CVQKTSEAEALAAGGVRDLFISNEVIAPA 100


>gi|148360017|ref|YP_001251224.1| metal-activated pyridoxal enzyme [Legionella pneumophila str.
           Corby]
 gi|296108162|ref|YP_003619863.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99
           Alcoy]
 gi|148281790|gb|ABQ55878.1| metal-activated pyridoxal enzyme [Legionella pneumophila str.
           Corby]
 gi|295650064|gb|ADG25911.1| metal-activated pyridoxal enzyme [Legionella pneumophila 2300/99
           Alcoy]
          Length = 397

 Score = 42.7 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 54/195 (27%), Gaps = 27/195 (13%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L ID   LK+N   M          +  + +T            C +IA      G    
Sbjct: 39  LVIDYEKLKHNLEIMQQHGFTWGIGIRPHCKT----------HKCTQIARLQLEYGAIGI 88

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSC 118
               + E   L        +     +   +   +F+           V        L   
Sbjct: 89  SAAKLSEAAALVSKRITNVLITSLIVSEAKYSRLFNCLKSAPDLMLVVDDKDNIRMLNKL 148

Query: 119 GVSHPYALQ----VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           G S    +     +D+G  R G++ + AL++ H        +L  I      A       
Sbjct: 149 GKSLNQPVHVLLDIDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQC---YAGHLQHIQ 205

Query: 175 NSVQLERFRTLISHY 189
           N  + + F   +   
Sbjct: 206 NYEERKAFSLQVMEM 220


>gi|172062516|ref|YP_001810167.1| alanine racemase domain-containing protein [Burkholderia ambifaria
           MC40-6]
 gi|171995033|gb|ACB65951.1| alanine racemase domain protein [Burkholderia ambifaria MC40-6]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 11/173 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++NN   M A   +   +    VK       C+++  A   AG Q   V++++E 
Sbjct: 13  IDVDRMRNNIARMQAHLDALGVKFRPHVKT----TKCQQVVDAQIAAGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +  I          +       I   S     +        G    
Sbjct: 69  EQFFAAGVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSLQTANSIAEFGREHGERFD 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             ++VD   +R G+   + L           G     +   A +       ++
Sbjct: 129 VWIEVDVDGHRSGIRPDDGLLIDVGRALVDGGMALGGVLAHAGSSYEYDTHDA 181


>gi|319893129|ref|YP_004150004.1| hypothetical protein SPSINT_1840 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162825|gb|ADV06368.1| Hypothetical protein SPSINT_1840 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 358

 Score = 42.7 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 7/164 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             ++ I+L+ +K N   +  +      R   V K      G  K+       G      +
Sbjct: 1   MPQIHINLSKIKYNAMVLQHMLAEQGIRMIPVTKCMG---GDPKVRQQFREMGFNTLAES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +   +      P     ++ G  P +   +   + I + + +  +   S      GV H
Sbjct: 58  RLT-AMMTNEQHPTEHDMMIKGALPNEIHDVVRYSQISIQTELETIRALSDEAVAQGVKH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
              L VD    R G    E +         K   L  +  +  C
Sbjct: 117 HIYLMVDWKDGREGALTYEVVPLIKEIIRLKGVYLKGLSFNFMC 160


>gi|270159139|ref|ZP_06187795.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae
           D-4968]
 gi|289166027|ref|YP_003456165.1| alanine racemase [Legionella longbeachae NSW150]
 gi|269987478|gb|EEZ93733.1| putative metal-activated pyridoxal enzyme [Legionella longbeachae
           D-4968]
 gi|288859200|emb|CBJ13132.1| putative alanine racemase [Legionella longbeachae NSW150]
          Length = 374

 Score = 42.7 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 45/178 (25%), Gaps = 26/178 (14%)

Query: 1   MHSNEF--LRLKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAP 50
           M   E     L ID   LK N   M          +  + +T            C K+A 
Sbjct: 8   MKKTELDTPCLVIDKNILKTNLEKMKKHGIENEINIKPHCKT----------HKCSKLAG 57

Query: 51  ALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDT------NLIPVIS 104
                G     V  + E   L        +     I   +   +          ++ V S
Sbjct: 58  LQIEYGAIGVCVAKISEAEVLIKEEIPNILITSPVITKNKISRLIACLEKAPSTMVVVDS 117

Query: 105 SVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIIS 162
               L                L +D G  R G+  + AL+F           L  +  
Sbjct: 118 KENILALNEAGARHNKRIHVLLDIDPGIGRTGIKPEHALNFARELQRLPWLHLMGVQC 175


>gi|302185892|ref|ZP_07262565.1| Orn/DAP/Arg decarboxylase 2:Orn/DAP/Arg decarboxylase 2
           [Pseudomonas syringae pv. syringae 642]
          Length = 371

 Score = 42.7 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 93/337 (27%), Gaps = 20/337 (5%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            +D   +  N    +         A+ K N       ++  AL   G+  F V S+ E  
Sbjct: 18  TVDTHWITRNAQQFSGCFPGTVLYAM-KANP----LPQVLEALSQGGINHFDVASLAE-- 70

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            ++         V Y ++P + +                L    +L+      P      
Sbjct: 71  -VQTVHNTLPNAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELLKLRDVLPERDSTI 129

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLI 186
           + F R   S   A+      F       + ++  +A + D S   S     Q       +
Sbjct: 130 SLFVRYAPSESTAVYDLRGKFGASPALATQLVHQVASSTDWSLGLSFHVGSQAIEEGPWL 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +A +  ++  +   +       PG  L    +  +    +   +     +  + 
Sbjct: 190 AALDDADAIVRDTAQHVRHLDIGGGF--PGNYLNSMGNTTDLVGRVCEHIQTSPTLKDLN 247

Query: 247 KALA-GELVSYG----GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGF 301
                G  + YG      + L+R         G   G       L               
Sbjct: 248 LICEAGRGLVYGGMSLFARVLSRREHSVFCGAGIFGGLLSAQQWLQFPARVWRDAAPYTG 307

Query: 302 IKGYMVPILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
                  I G     MD   F  T +  I  GD+++ 
Sbjct: 308 AAENTFNIFGPTCDSMDRLAFPYTLASDIREGDWLEF 344


>gi|121592921|ref|YP_984817.1| alanine racemase domain-containing protein [Acidovorax sp. JS42]
 gi|120605001|gb|ABM40741.1| alanine racemase domain protein [Acidovorax sp. JS42]
          Length = 393

 Score = 42.7 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 18/75 (24%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L +DL A++ N   M   +         +A+               +IA  L  +G +  
Sbjct: 28 LVVDLDAMERNIQRMAEFAHKHQVRWRPHAKM----------HKSAEIALQLEWSGARGH 77

Query: 61 FVTSVEEGVKLRLYT 75
           V  V E   L    
Sbjct: 78 CVQKVSEAEALAAGG 92


>gi|312132077|ref|YP_003999417.1| alanine racemase domain protein [Leadbetterella byssophila DSM
           17132]
 gi|311908623|gb|ADQ19064.1| alanine racemase domain protein [Leadbetterella byssophila DSM
           17132]
          Length = 355

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 68/236 (28%), Gaps = 15/236 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           M   +   L I    ++ N   M  L G A+    VK        + +   + + G+Q F
Sbjct: 8   MKRFDTPSLLILRDKVEANIDKMIQL-GGAKLMPHVKT----HKMDVVTQLMIDKGIQRF 62

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVP-----QLTFYSKL 115
             +++ E   +     +A   +L     GQ+ I F         +        +    ++
Sbjct: 63  KASTLAELEMV--ARCRASEVLLAHQIMGQKLIWFQKLKDQYPHTKMCLLVDCMEVAEEI 120

Query: 116 MSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIIS--HLACADDPSSH 173
                     + V+ G NR G+   E L        K        +        D   + 
Sbjct: 121 QRELKEVDVYIDVNVGMNRTGIQPGEGLKELIAYVKKCSNMKLKGLHVYDGHITDVGLNE 180

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILL-GPNYHFQLTRPGISLYGGTDKINK 228
                 + F  L  +       +A  S           +   PG S++       K
Sbjct: 181 REQRVADCFEGLQEYMDPHWEMIAGGSPAFSVHRKSPDRTLSPGTSVFWDWGYGEK 236


>gi|217979517|ref|YP_002363664.1| alanine racemase domain protein [Methylocella silvestris BL2]
 gi|217504893|gb|ACK52302.1| alanine racemase domain protein [Methylocella silvestris BL2]
          Length = 383

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 40/137 (29%), Gaps = 11/137 (8%)

Query: 7   LRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L +DL     N   M A+  +         K         +IA A   AG       +
Sbjct: 29  PSLILDLDVFDANVARMQAICDANGVNLRPHAKS----HKSSRIAQAQREAGAIGVCCAT 84

Query: 65  VEEGVKLRLYT-----PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCG 119
           + E   + +         A +     I    +      + + VI +       S   +  
Sbjct: 85  INEAEAMAVAGVGGLLITAPLVTDVKISRLCDLCARAPDTMAVIDNADNALALSAAFAGR 144

Query: 120 VSHPYALQVDTGFNRLG 136
            +    + +D G +R G
Sbjct: 145 PALNVLVDLDIGHHRTG 161


>gi|254503042|ref|ZP_05115193.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
          protein [Labrenzia alexandrii DFL-11]
 gi|222439113|gb|EEE45792.1| Pyridoxal-dependent decarboxylase, C-terminal sheet domain
          protein [Labrenzia alexandrii DFL-11]
          Length = 406

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 16 LKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYT 75
          L+ +  +   L       AV K N    G   +   L  AG   F V S  E   +R  +
Sbjct: 28 LRADAQNFKKLFPGKTAYAV-KTN----GEPFVLKELAAAGYDCFDVASPAEFAAVREAS 82

Query: 76 PQARIFVLYG 85
          P+A +  ++ 
Sbjct: 83 PKAEMLYMHP 92


>gi|33591729|ref|NP_879373.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis
           Tohama I]
 gi|33571372|emb|CAE44851.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis
           Tohama I]
 gi|332381147|gb|AEE65994.1| putative metal-activated pyridoxal enzyme [Bordetella pertussis CS]
          Length = 381

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 50/172 (29%), Gaps = 11/172 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             +D+  +++N   M              VK       C  +A A   AG     V++++
Sbjct: 17  AIVDVARMQHNIARMQDRMNGLGVSLRPHVKT----SKCTPVALAQLAAGAHGVTVSTLK 72

Query: 67  EGVKLRLYTPQARIF---VLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMSCGVS 121
           E  +         ++   +     P    +        I   ++           +    
Sbjct: 73  EAEQFFAAGITDILYAVGMAEHRLPAALALRRRGCDLKIITDNAGSARAIADFGRAHDEV 132

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
               +++DT  +R G+  +EA      +   + G     +   A +      
Sbjct: 133 FEVWIEIDTDGHRSGIKPEEAALLAVGAALHEGGMRLGGVMTHAGSSYDLDT 184


>gi|134100867|ref|YP_001106528.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
 gi|291003519|ref|ZP_06561492.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913490|emb|CAM03603.1| ornithine decarboxylase [Saccharopolyspora erythraea NRRL 2338]
          Length = 407

 Score = 42.3 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 2  HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
          H      L +DL  + + +  +  L   A     VK N       ++   L   G   F 
Sbjct: 29 HRPPTPCLVVDLPTIAHRYRRLRGLFPRAVVHYAVKANP----APEVVSLLAGLGAS-FD 83

Query: 62 VTSVEEG-VKLRL 73
          V S  E  + LR 
Sbjct: 84 VASPAEAELCLRA 96


>gi|13472621|ref|NP_104188.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
 gi|14023367|dbj|BAB49974.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
          Length = 377

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      +++    VK N       +I   L   G   F   SV E
Sbjct: 20 LVVDLDVVRDNFRAFEKALPDSKIYYAVKANP----APEILRLLAAMG-SSFDTASVAE 73


>gi|326800274|ref|YP_004318093.1| alanine racemase domain protein [Sphingobacterium sp. 21]
 gi|326551038|gb|ADZ79423.1| alanine racemase domain protein [Sphingobacterium sp. 21]
          Length = 374

 Score = 42.3 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 52/185 (28%), Gaps = 20/185 (10%)

Query: 16  LKNNWHSMNALSGNA-RTAAVVK----DNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +KNN   + ++  +  +    +K     +A           L  AG+  F   ++ E   
Sbjct: 29  VKNNIQLLMSMVKSVDKLRPHIKTSKSADA--------IQLLQLAGINKFKCATIAEAEL 80

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-------SHP 123
           L     Q  +     + P   + I      P  S    +  +               +  
Sbjct: 81  LGDCGVQDVLLAYQPVGPNINRFIALVKRFPNTSFACLIDQFDIASQLNQVAFAESFNLN 140

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
               ++ G NR G+   +         +     L  +  +     + S      Q  R+ 
Sbjct: 141 IYFDINVGMNRTGIKTDKVSALAEQCSSLSNLILLGLHCYDGHIHEASLEARQNQCHRYF 200

Query: 184 TLISH 188
           T I  
Sbjct: 201 TEIEQ 205


>gi|120612870|ref|YP_972548.1| putative threonine aldolase [Acidovorax citrulli AAC00-1]
 gi|120591334|gb|ABM34774.1| putative threonine aldolase [Acidovorax citrulli AAC00-1]
          Length = 392

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 18/89 (20%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             +DL A++ N   M   +         +A+             C ++A  L  AG    
Sbjct: 27  AVVDLDAMERNIQRMAEFARKHQVRWRPHAKM----------HKCAELALRLQQAGAGGA 76

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPG 89
            V  V E   L              I P 
Sbjct: 77  CVQKVSEAEALAAGGVTDIYISNEVIAPA 105


>gi|319899290|ref|YP_004159385.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73]
 gi|319403256|emb|CBI76815.1| lysine/ornithine decarboxylase [Bartonella clarridgeiae 73]
          Length = 453

 Score = 42.0 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 42/163 (25%), Gaps = 5/163 (3%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H +E   L +DL  +  N+ +       +R    +K N       +I   L + G   F 
Sbjct: 89  HRSEGPCLVVDLDVVHENYLNFKKALPQSRIFYAIKANP----APEILRLLVSLG-SSFD 143

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             S+ E          A           +  I     L   + +V  L    K+      
Sbjct: 144 AASIAEIEMALKAGATADRISFGNTIKKERDIARAHALGVSLYAVDCLEEVEKVACAAPG 203

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL 164
                +V T        L +            L     +    
Sbjct: 204 ARVFCRVLTDGEGAEWPLSQKFGCVPFMAVDVLRHAHQLGLQA 246


>gi|260576176|ref|ZP_05844169.1| alanine racemase domain protein [Rhodobacter sp. SW2]
 gi|259021656|gb|EEW24959.1| alanine racemase domain protein [Rhodobacter sp. SW2]
          Length = 372

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 50/186 (26%), Gaps = 26/186 (13%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYG---------LGCEKIAPALYNAGV 57
             L +DL AL+ N  SM +             +A G             +IA     AG 
Sbjct: 24  PSLILDLDALEANIASMQSQ-----------ADAAGVRLRVHGKMHKSAEIAQMQIAAGA 72

Query: 58  QDFFVTSVEEGVK-----LRLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF 111
                  V E        LR           +      +  ++    L  V         
Sbjct: 73  CGICCQKVSEAEAFARAGLRDILITNQVRGAVKTDRLARLPLLGARILTCVDDPANVAEL 132

Query: 112 YSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS 171
            +     G      +++D G  R G++  +A             + + + ++   A   +
Sbjct: 133 SAAAQRHGTEIEVLVEIDCGAGRCGVAPDQAPGLAQAIVAAPGLRFAGLQAYQGSAQHQA 192

Query: 172 SHVNSV 177
             V   
Sbjct: 193 DPVARR 198


>gi|320329052|gb|EFW85051.1| ornithine decarboxylase, putative [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330885445|gb|EGH19594.1| ornithine decarboxylase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 371

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 97/344 (28%), Gaps = 34/344 (9%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            +D   +  N    +         A+ K N      E++  AL   G+  F V S+ E  
Sbjct: 18  TVDPRWITRNAQQFSGCFPGTVLYAM-KANP----LEQVLEALSQGGINHFDVASLAEVQ 72

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            +    P A  +++  +                   +      SKL          +   
Sbjct: 73  TVHNTLPTAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTI--- 129

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLI 186
           + F R   S   A+      F       + ++  +A + D S   S     Q       +
Sbjct: 130 SLFVRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQAIEDGPWL 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +A +  ++  +   +         ++  G T  +          +   +  L  
Sbjct: 190 AALNDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLK-DLNL 248

Query: 247 KALAGELVSYG----GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
              AG  + YG      + L+R         G   G    LS       P      + + 
Sbjct: 249 ICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGL---LSAQQWLQFP-----ARVWR 300

Query: 303 KGYMV--------PILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
            G            I+G     MD   F  + +  I   D+++ 
Sbjct: 301 DGTPYTGAAENTFNIVGPTCDSMDRLAFPYSLASDIRESDWLEF 344


>gi|168186352|ref|ZP_02620987.1| amino acid racemase [Clostridium botulinum C str. Eklund]
 gi|169295637|gb|EDS77770.1| amino acid racemase [Clostridium botulinum C str. Eklund]
          Length = 368

 Score = 42.0 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 105/352 (29%), Gaps = 32/352 (9%)

Query: 5   EFLRLKIDLTALKNN----WHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
            + +L+I+   LK+N      ++  +        V K      G  + A A+ + G+   
Sbjct: 2   SYPQLQINTKKLKHNAKVEVEALRRI--GVEVMGVNKVF---NGSVETAKAIVDGGMNVV 56

Query: 61  FVTSVEEGVKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SC 118
             + ++    L+     +    +L      +   +     I + S +  +   SK     
Sbjct: 57  AESRID---NLKKIQVVKCEKALLRSPALSEIGDVVKYADISLNSEIEIIKELSKEAIKQ 113

Query: 119 GVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV- 174
              H   L +D G  R G+     +E  +           ++  + ++  C       + 
Sbjct: 114 NKVHKVLLMIDFGDIREGIWFENKEEIEEALSEIKLLPNIEIYGLGTNFNCYGTALPTIK 173

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILL--------GPNYHFQLTRPGISLYGGTDKI 226
           N          + +   I+    S               P     L   G+  +G     
Sbjct: 174 NGKMFVELARELENKLNIKFKYLSGGNCTSYHLVDKGIFPEGINHLRIGGLHQFGIEYVE 233

Query: 227 NKSHPMQTVVTAEARIILIR-KALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
            K               +     L GE++    +  +    L   A +   +        
Sbjct: 234 GKYLDEYYHSQMSIDKYVSDLYILKGEIIELNTKPTVPVGELGVDAFLKTKEFEDRGNRR 293

Query: 286 LDSEHSPSVFLGGKGF--IKGYMVPILGKITMDMTMFDITDS-LSIEVGDYI 334
                     +  +    + G +  ILG+ + D T+ D+ DS    ++GD I
Sbjct: 294 RALLAFGRQDIPEENIHPVDGNL-KILGQTS-DHTIIDVEDSEYDYKLGDTI 343


>gi|319794305|ref|YP_004155945.1| alanine racemase domain protein [Variovorax paradoxus EPS]
 gi|315596768|gb|ADU37834.1| alanine racemase domain protein [Variovorax paradoxus EPS]
          Length = 380

 Score = 42.0 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 6/90 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L IDL A+  N   M A +          VK         +IA     AG       +V 
Sbjct: 26  LLIDLPAMTRNIERMAAFAKARGIGLRPHVKT----HKSIEIARRQVAAGAIGVSCVTVG 81

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
           E   +     ++ +     + P +   +  
Sbjct: 82  EAEIMVDGGIRSVLITSPAVTPSKIARLVK 111


>gi|296394573|ref|YP_003659457.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
 gi|296181720|gb|ADG98626.1| Orn/DAP/Arg decarboxylase 2 [Segniliparus rotundus DSM 44985]
          Length = 421

 Score = 41.6 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 5/75 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  ++  +  + A    AR    VK N       ++   L  AG   F V SV E 
Sbjct: 56  LVVDLETVRERYCQLTAALPKARVYYAVKANP----AAEVVRELAAAG-SCFDVASVAEI 110

Query: 69  VKLRLYTPQARIFVL 83
                     R    
Sbjct: 111 ELCLAAGANPRDLCY 125


>gi|220926980|ref|YP_002502282.1| alanine racemase domain-containing protein [Methylobacterium
          nodulans ORS 2060]
 gi|219951587|gb|ACL61979.1| alanine racemase domain protein [Methylobacterium nodulans ORS
          2060]
          Length = 359

 Score = 41.6 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 6/67 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          IDL  ++ N   + A    A  A    +K          +A     AG +     ++ E 
Sbjct: 19 IDLDQVERNIARLQAACDAAGLANRPHIKT----HKSPVLARLQQEAGARGLTCQTLGEA 74

Query: 69 VKLRLYT 75
            +    
Sbjct: 75 EVMAEAG 81


>gi|288818467|ref|YP_003432815.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|288787867|dbj|BAI69614.1| ornithine decarboxylase [Hydrogenobacter thermophilus TK-6]
 gi|308752057|gb|ADO45540.1| Orn/DAP/Arg decarboxylase 2 [Hydrogenobacter thermophilus TK-6]
          Length = 390

 Score = 41.6 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 99/348 (28%), Gaps = 42/348 (12%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL  +K  +  +     N R    VK N        +  AL   G   F V S+EE  K+
Sbjct: 45  DLEGIKRRYKEIELYMPNFRIYYAVKAN----DHTSVIKALSEKG-SGFEVASLEELKKV 99

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
                +    +       +E I +  ++     +V   T   K+          +++   
Sbjct: 100 LSLKVEPERIISSNPVKSEEFIDYAYSVHVNRFAVDSFTEVEKIAKVAKRARVYVRLVVP 159

Query: 132 FNRLGLS--------LQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
                          +  A+D    +  K L    +     +  ++  +   +++     
Sbjct: 160 NEGSDWPLSKKFGVDVDTAIDILEYAREKGLVPYGITFHVGSQCNNYRNWFIAIRKSAEL 219

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARII 243
              +  +G    + +  G +    Y ++  R     Y     + K  P            
Sbjct: 220 WEKAKRRGFRLQMLNMGGGIPVK-YTYEALRIEDIAYYIKGLLQKFFPNP---------P 269

Query: 244 LIRKALAGELVSYGGQKKLTR--------DSLIAVAAIGYADGYPLTLSGLDSEHSPSVF 295
              +   G  +       +TR        D        G  +G    L G+         
Sbjct: 270 HELQIEPGRGIVGDQGIMITRIIGKAKRNDENWLYVDTGVFNGLAEALGGIRYPFYIDRE 329

Query: 296 LGGKGF-IKGYMVPILGKITMDMT--MFDITDSLSIEVGDYIQIFGPD 340
              K + I G         +MD+   M  +      EVGD++ I    
Sbjct: 330 GELKEWTIGGVSCD-----SMDVIAKMVAL---PEPEVGDHLYILSAG 369


>gi|319792881|ref|YP_004154521.1| alanine racemase domain protein [Variovorax paradoxus EPS]
 gi|315595344|gb|ADU36410.1| alanine racemase domain protein [Variovorax paradoxus EPS]
          Length = 379

 Score = 41.6 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 18/179 (10%)

Query: 9   LKIDLTA-------LKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQD 59
             ID  A       +++N   M A   +   R    VK       C  IA A  +AG Q 
Sbjct: 7   ATIDTPAAIVERPRMQHNIARMQARMNALGVRFRPHVKT----SKCIDIARAQRDAGAQG 62

Query: 60  FFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSK 114
             V++++E  +  +      ++ +           + +       I              
Sbjct: 63  ITVSTLKEAEQFFVAGFTDILYAVGMAQHRLPHALELRRRGCALSIITDGVASARAIAEF 122

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
             + G +    ++VDT  +R G+   + +           G     +   A +      
Sbjct: 123 GRANGEAFDVLIEVDTDGHRSGIRPDDDVLLEVAHVLHGGGMHLAGVMTHAGSSYDLDT 181


>gi|209884063|ref|YP_002287920.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5]
 gi|209872259|gb|ACI92055.1| ornithine decarboxylase [Oligotropha carboxidovorans OM5]
          Length = 411

 Score = 41.6 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +DL  +++N+ +      ++R    VK N       ++   L + G   F   +V E
Sbjct: 54  LVVDLDVVRDNYQTFAKALPDSRVFYAVKANP----APEVLTLLASLG-SCFDTATVPE 107


>gi|326381918|ref|ZP_08203611.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL
          B-59395]
 gi|326199344|gb|EGD56525.1| hypothetical protein SCNU_03202 [Gordonia neofelifaecis NRRL
          B-59395]
          Length = 354

 Score = 41.6 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 22/88 (25%), Gaps = 18/88 (20%)

Query: 11 IDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
          +D+  L  N  +M          L  +A+T            C +IA     AG     V
Sbjct: 9  VDVDRLDRNLTAMADWAERHGIRLRPHAKT----------HKCAEIARRQLEAGAVGLSV 58

Query: 63 TSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
           ++ E                       
Sbjct: 59 ATIGEAEIFAELGVDDLFIAYPLWLSEN 86


>gi|158421957|ref|YP_001523249.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571]
 gi|158328846|dbj|BAF86331.1| ornithine decarboxylase [Azorhizobium caulinodans ORS 571]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          + +DL  ++ N+ +      + R    VK N        I  AL   G   F   SV+E
Sbjct: 19 VVVDLDVVRANYTAFARALPDTRVFYAVKANP----DAAILKALAELG-SCFDCASVQE 72


>gi|260460667|ref|ZP_05808918.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
 gi|259033772|gb|EEW35032.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium opportunistum WSM2075]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       +I   L   G   F   SV E
Sbjct: 20 LVVDLDVVRDNFRAFEKALPDSRIYYAVKANP----APEILRLLAAMG-SSFDTASVAE 73


>gi|309388498|gb|ADO76378.1| alanine racemase domain protein [Halanaerobium praevalens DSM 2228]
          Length = 356

 Score = 41.6 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 64/347 (18%), Positives = 117/347 (33%), Gaps = 29/347 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
            + +L I LT ++ N   +       +    AVVK  A   G  +I  A   A ++    
Sbjct: 2   SYPKLDIYLTKIEANAQKLKKELKAKKIKLTAVVKGLA---GDVEIFKAYQKADIKSIAD 58

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS- 121
           + ++  +K R    Q  I +L      + + +       ++S     +  SK        
Sbjct: 59  SRLKNIIKYRKAGYQGEILMLRIPMLSEIEKMIPYVDSVLVSEAKTASLISKFAVKQKKV 118

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC-ADDPSSHVNSVQLE 180
               + VD G  R G+  +  L       +     L  I ++L C A       N+ +L 
Sbjct: 119 IDLIIMVDLGDRREGILAKNLLALAAKIKSLSAVNLKGIGTNLGCFAGIIPDDENTKKLI 178

Query: 181 RFRTLISHYKGIEASLASSSGI-----LLGPNYHFQLT--RPGISLYGGTDKINKSH--- 230
             +  + +    +  + S+        +  P    ++T  R G  +  GTD IN+     
Sbjct: 179 ALKKELENSLNFKLDILSAGNTATLKLIKEPELSSEITNLRIGEGILIGTDIINQDLLQD 238

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEH 290
                   +A I+ ++                     +        D      + L    
Sbjct: 239 YNHYNFRLQAEIVELK--AKPSSPEGEIAFGGQGRGQL------IEDKGLRKRAILAVGK 290

Query: 291 SPSVFLGGKGFIKGYMVPILGKITMDMTMFDITDSL-SIEVGDYIQI 336
               + G     KG  V +LG  + D  + DITD+   +EVGD ++ 
Sbjct: 291 QDIDYQGLYPKQKG--VQVLGASS-DHLITDITDAELELEVGDILEF 334


>gi|282855759|ref|ZP_06265065.1| alanine racemase domain protein [Pyramidobacter piscolens W5455]
 gi|282586391|gb|EFB91653.1| alanine racemase domain protein [Pyramidobacter piscolens W5455]
          Length = 369

 Score = 41.6 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 20/85 (23%), Gaps = 18/85 (21%)

Query: 7  LRLKIDLTALKNNWHSM--------NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
            L ID   +++N   M          L  + +T               +A      G +
Sbjct: 9  PSLLIDREIMRDNMRFMLDYAARHGAKLRPHTKT----------HKMPAVARLQVEMGAR 58

Query: 59 DFFVTSVEEGVKLRLYTPQARIFVL 83
             V  V E   +            
Sbjct: 59 GIAVAKVGEAEAMAADGLDDIFIAN 83


>gi|319781640|ref|YP_004141116.1| ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
 gi|317167528|gb|ADV11066.1| Ornithine decarboxylase [Mesorhizobium ciceri biovar biserrulae
          WSM1271]
          Length = 377

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       +I   L   G   F   SV E
Sbjct: 20 LVVDLDVVRDNFRAFEKALPDSRIYYAVKANP----APEILRLLAAMG-SSFDTASVAE 73


>gi|326318901|ref|YP_004236573.1| alanine racemase domain-containing protein [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375737|gb|ADX48006.1| alanine racemase domain protein [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 18/96 (18%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
             +DL A++ N   M   +         +A+             C ++A  L  AG    
Sbjct: 27  AVVDLDAMERNIQRMADFARKHQVRWRPHAKM----------HKCAELALRLQQAGAGGA 76

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFD 96
            V  V E   L              I P + + +  
Sbjct: 77  CVQKVSEAEALAAGGVTDIYISNEVIAPAKLQRVAR 112


>gi|116691668|ref|YP_837201.1| alanine racemase domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|116649668|gb|ABK10308.1| alanine racemase domain protein [Burkholderia cenocepacia HI2424]
          Length = 375

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 11/147 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           +H+       ID+  ++ N   M     +   R    VK       C  +  A   AG Q
Sbjct: 3   LHTLNTPAALIDIDRMQRNIARMQTHLDALGVRFRPHVKT----TKCRHVVDAQIAAGAQ 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYS 113
              V++++E  +   +  +  ++ +  +          +       I   S        +
Sbjct: 59  GITVSTLKEAEQFFAHGIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAIAA 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQ 140
                G      ++VD   +R G+   
Sbjct: 119 FGREHGERFDVWIEVDVDGHRSGIPPD 145


>gi|169628346|ref|YP_001701995.1| hypothetical protein MAB_1253c [Mycobacterium abscessus ATCC 19977]
 gi|169240313|emb|CAM61341.1| Conserved hypothetical protein (alanine racemase?) [Mycobacterium
           abscessus]
          Length = 360

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 38/138 (27%), Gaps = 10/138 (7%)

Query: 11  IDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +DL  +  N   +         R     K       C +IA    ++G     V +V E 
Sbjct: 20  VDLAVMDRNIERLAGRLRGTGIRLRPHAKS----HKCIEIARRQIDSGAIGLTVATVGEA 75

Query: 69  VKLRLYTPQARIFVLYGIHPGQ----EKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                                Q     + +     + V                 +    
Sbjct: 76  EVFAEAGFIDLFIAYPLWVTAQKARRLRQVASRAALRVAVDSAAGAQQLAEHLGDLPITV 135

Query: 125 ALQVDTGFNRLGLSLQEA 142
            ++VD+G +R G++  +A
Sbjct: 136 VIEVDSGHHRTGVAPDQA 153


>gi|320104390|ref|YP_004179981.1| alanine racemase domain-containing protein [Isosphaera pallida ATCC
           43644]
 gi|319751672|gb|ADV63432.1| alanine racemase domain protein [Isosphaera pallida ATCC 43644]
          Length = 390

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 46/140 (32%), Gaps = 16/140 (11%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
            AL++N  ++  L+G+A R    VK          +       G+    V ++ E   + 
Sbjct: 36  EALESNLATLIRLAGSAARLRPHVKT----HKMPNLVRRCEALGIHRHKVATIAEAEMVA 91

Query: 73  LYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-----------SVPQLTFYSKLMSCGVS 121
               +  +     + P  ++++      P  +           +  + T           
Sbjct: 92  QAGGRDVLIAYPLVGPKLDRLMKLRAAYPETTFRVTLDHLRGLTDLEETVARHGGPHASP 151

Query: 122 HPYALQVDTGFNRLGLSLQE 141
            P  + ++ G NR G+   +
Sbjct: 152 VPVLIDLNVGMNRTGIMPDD 171


>gi|238024453|ref|YP_002908685.1| hypothetical protein bglu_2g10490 [Burkholderia glumae BGR1]
 gi|237879118|gb|ACR31450.1| Hypothetical protein bglu_2g10490 [Burkholderia glumae BGR1]
          Length = 376

 Score = 41.2 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 11/173 (6%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +        +K       C  +  A   AG +   V++++E 
Sbjct: 13  IDVARMNRNIERMQQRMNALGVNFRPHIKT----SKCAPVVTAQLEAGARGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +        + +          I   S        +     G S  
Sbjct: 69  EQFFALGVRDIVYAVGIAPAKLAQALALRRRGCDLKIVADSVACAQAIVAFGRQHGESFE 128

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             ++VD   +R GL  ++       +     G     +   A +       ++
Sbjct: 129 VWIEVDVDGHRSGLDPEDEALLAVAATLVGGGMHLGGVMAHAGSSYEHDTHDA 181


>gi|299132171|ref|ZP_07025366.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2]
 gi|298592308|gb|EFI52508.1| Orn/DAP/Arg decarboxylase 2 [Afipia sp. 1NLS2]
          Length = 380

 Score = 41.2 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       ++   L + G   F   +V E
Sbjct: 23 LVVDLEVVRDNYQTFAKALPDSRVFYAVKANP----APEVLSLLASLG-SCFDTATVAE 76


>gi|86359219|ref|YP_471111.1| ornithine decarboxylase protein [Rhizobium etli CFN 42]
 gi|86283321|gb|ABC92384.1| probable ornithine decarboxylase protein [Rhizobium etli CFN 42]
          Length = 506

 Score = 41.2 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  ++ N+H+      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 149 LVVDLDVIRENFHAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 203

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 204 EMALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 261


>gi|302552096|ref|ZP_07304438.1| alanine racemase domain-containing protein [Streptomyces
          viridochromogenes DSM 40736]
 gi|302469714|gb|EFL32807.1| alanine racemase domain-containing protein [Streptomyces
          viridochromogenes DSM 40736]
          Length = 364

 Score = 41.2 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 22/90 (24%), Gaps = 18/90 (20%)

Query: 9  LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L +D   L++N   M          L  +A      K       C +I      AG +  
Sbjct: 14 LVVDPDVLESNIERMAEASRAQGFVLRPHA------KA----HKCAQIGDLQLRAGARGL 63

Query: 61 FVTSVEEGVKLRLYTPQARIFVLYGIHPGQ 90
           V ++ E                       
Sbjct: 64 SVATIGEAEAFARVGVDDLFIAYPVWLDAD 93


>gi|154150589|ref|YP_001404207.1| Orn/DAP/Arg decarboxylase 2 [Candidatus Methanoregula boonei 6A8]
 gi|153999141|gb|ABS55564.1| Orn/DAP/Arg decarboxylase 2 [Methanoregula boonei 6A8]
          Length = 397

 Score = 41.2 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 20/57 (35%), Gaps = 5/57 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          ID   ++ N+          +    VK N+       I   L + G   F V S+ E
Sbjct: 39 IDHAKIRENYREFKKNFPKIQAYFAVKANSN----PGIVKTLMDLGAS-FDVASMPE 90


>gi|227823450|ref|YP_002827423.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234]
 gi|227342452|gb|ACP26670.1| ornithine decarboxylase SpeF [Sinorhizobium fredii NGR234]
          Length = 377

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       +I   L   G  +F   SV E 
Sbjct: 20  LVVDLDIVRDNFKAFRHALPDSAIYYAVKANP----APEILRLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                                +  I     L   + +V       K+           
Sbjct: 75  EMALEAGATPSRISYGNTIKKERDIARAHALGINLFAVDSHEEVEKVARAAPGARVFC 132


>gi|114705385|ref|ZP_01438293.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506]
 gi|114540170|gb|EAU43290.1| ornithine decarboxylase [Fulvimarina pelagi HTCC2506]
          Length = 377

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +K N+++      ++     VK N       +I   L + G  +F   SV E
Sbjct: 20 LVVDLDVVKENFNAFRKALPDSAIFYAVKANP----APEILKLLASLG-SNFDCASVAE 73


>gi|170697287|ref|ZP_02888381.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10]
 gi|170137907|gb|EDT06141.1| alanine racemase domain protein [Burkholderia ambifaria IOP40-10]
          Length = 376

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 11/138 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++NN   M A   +   R    VK       C+ +  A    G Q   V++++E 
Sbjct: 13  IDVDRMRNNIARMQAHLDALGVRFRPHVKT----TKCQHVVDAQIAGGAQGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +  I          +       I   S              G    
Sbjct: 69  EQFFAAGVRDIVYAVGMIPAKLGQALALRRQGCDLKIVADSVETANAIAEFGREHGERFD 128

Query: 124 YALQVDTGFNRLGLSLQE 141
             +++D   +R G+   +
Sbjct: 129 VWIEIDVDGHRSGIPPDD 146


>gi|268590616|ref|ZP_06124837.1| putative amino acid processing protein [Providencia rettgeri DSM
           1131]
 gi|291314008|gb|EFE54461.1| putative amino acid processing protein [Providencia rettgeri DSM
           1131]
          Length = 355

 Score = 40.8 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 11/150 (7%)

Query: 12  DLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL  L+ N   M              +K         ++A      G +     +++E  
Sbjct: 10  DLQQLEKNVRGMTGKLTQQGIEHWPHIKT----HKSVELAKFEIACGAKGITCATLQEAT 65

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-----GVSHPY 124
            +        +     I   + +   +      + ++      ++ +S            
Sbjct: 66  VMAKGGIDHILLAYPMIGEQKCQQFIELAKKIKLRTIIDSLQGAEQLSAAAKQENQIIEV 125

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKL 154
            + VD G +R G+ L +   F         
Sbjct: 126 YIAVDYGAHREGIQLDDLEPFALAIQKLPN 155


>gi|239834177|ref|ZP_04682505.1| alanine racemase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239822240|gb|EEQ93809.1| alanine racemase domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 354

 Score = 40.8 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 39/149 (26%), Gaps = 12/149 (8%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +K N   + A +     +    +K           A     AG        + E 
Sbjct: 17  IDIDRVKANIARVQAHADAIGVKLRPHIKT----HKLPFFAKMQVEAGAAGITCQKLGEA 72

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS-----SVPQLTFYSKLMSCGVSHP 123
             +              +   +   +   +    +S     S       ++         
Sbjct: 73  EVMADAGLTDIFLPYNILGREKLDRLHALHQRVTLSVTVDNSTSLAGLAARFADEKHPLK 132

Query: 124 YALQVDTGFNRLGLS-LQEALDFTHNSFN 151
             ++ DTG  R G+    EAL+       
Sbjct: 133 VLVECDTGMGRCGVQTPAEALELARIIDQ 161


>gi|84386137|ref|ZP_00989166.1| hypothetical protein V12B01_18126 [Vibrio splendidus 12B01]
 gi|84378907|gb|EAP95761.1| hypothetical protein V12B01_18126 [Vibrio splendidus 12B01]
          Length = 424

 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 99/353 (28%), Gaps = 31/353 (8%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPAL----YNAGVQ 58
                 I  +AL NN + M + + +   + +          G   + PA        G  
Sbjct: 46  SLPVAIIKQSALTNNLNWMQSFADHHQVKLSP--------HGKTSMTPAFFRQQLENGAW 97

Query: 59  DFFVTSVEEGVKLRLYT----PQARIFVLYGIHP--GQEKIIFDTNLIPV-ISSVPQLTF 111
              V +  +     +        A   V         Q    FD +      SSV     
Sbjct: 98  GITVATPAQAEVAAMAGAKRIIMANQLVGKTNMAIIEQLINEFDVDFYCCVDSSVNMQQL 157

Query: 112 YSKLMSCGVSHPYALQVDTGFNR-LGLSLQEALDFTHNS-----FNKKLGQLSLIISHLA 165
                +   +    ++      R    S QE L+           +    ++   + H  
Sbjct: 158 NQYFANTKQTLKVLIEFGVPGGRCGCRSPQEVLELAQTIQDTPALSLAGIEVYEGVIHGD 217

Query: 166 CADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDK 225
            A+       +  L    +L S        + + +G          L      L      
Sbjct: 218 NAEQDIRTFLNQALTSVESLASDGLIAGQPIITGAGSAWYDVVAECLANLTDYLAIIRPG 277

Query: 226 INKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSG 285
               H     + A+++++   +   G     GG  +   +    V +        + L  
Sbjct: 278 CYAIHDTGIYLDAQSKVLQRAQVNQGYACELGGDLESALEVWAYVISRPEPTKLVVGLGK 337

Query: 286 LDSEHSPSVFLGGKGFIKGYMVPILGKIT---MDM-TMFDITDSLSIEVGDYI 334
            D      + +  +G+  G  + + G  +   MD  T  +   S  IEVGD I
Sbjct: 338 RDVAFDAGLPIAERGYRNGEAISVKGLTSTAVMDQHTFVETDGSSEIEVGDMI 390


>gi|260102956|ref|ZP_05753193.1| aspartate alanine antiporter [Lactobacillus helveticus DSM 20075]
 gi|260083241|gb|EEW67361.1| aspartate alanine antiporter [Lactobacillus helveticus DSM 20075]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           ITD   + VGD++ I GP    + +  A  T  Y+ +  I
Sbjct: 162 ITDYTQLTVGDHVTIIGP---ANYLTNAIKTIGYEKVTGI 198


>gi|294102773|ref|YP_003554631.1| alanine racemase domain protein [Aminobacterium colombiense DSM
           12261]
 gi|293617753|gb|ADE57907.1| alanine racemase domain protein [Aminobacterium colombiense DSM
           12261]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 39/144 (27%), Gaps = 15/144 (10%)

Query: 7   LRLKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L +DL  ++ N   M   +          +K          IA     AG +   V  
Sbjct: 20  PSLLVDLDVMERNISWMQQKAQRAGVNLRPHIKT----HRTPDIAKKQLAAGAKGITVAK 75

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIF-------DTNLIPVISSVPQLTFYSKLMS 117
           + EG  +                 G  K+          T  + V               
Sbjct: 76  LGEGEVMAAEGIDDIFIAN--ELAGDIKMDRLLALARKTTLAVGVDHPDHVKMLAETFDG 133

Query: 118 CGVSHPYALQVDTGFNRLGLSLQE 141
                   + VDTG++R G+  +E
Sbjct: 134 ESRPMEIMIDVDTGYHRTGVGSKE 157


>gi|182412516|ref|YP_001817582.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1]
 gi|177839730|gb|ACB73982.1| Orn/DAP/Arg decarboxylase 2 [Opitutus terrae PB90-1]
          Length = 379

 Score = 40.8 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 42/350 (12%), Positives = 92/350 (26%), Gaps = 46/350 (13%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           +D  AL+  + +        +    VK N        I   L+  G   F V S+ E + 
Sbjct: 21  VDHDALRKAYRTFRKHLPRIQVYYAVKANP----DPAIVRTLFQEGAS-FDVASMPEFMI 75

Query: 71  L-----------RLYTP-QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           +           R        I+          + +     +    ++ ++    +    
Sbjct: 76  VHENIKRLPAKERQEWIWDKIIYANPTKPTETLEELNQYKPLVTFDNLEEIQKIKQHAPN 135

Query: 119 -----GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                 +  P    +    ++ G S  EA+D    +    LG   +     +   +  ++
Sbjct: 136 AGLVLRLKVPNTGAMVELSSKFGASPGEAVDLILEADKAGLGVEGISFHVGSQTTNFENY 195

Query: 174 VNSVQL--ERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHP 231
           V ++ L    F+            L    G    P  +    +P   +            
Sbjct: 196 VQALNLSANIFQEARERGYTKMNLLDIGGG---FPAPYDDTVKP-FEMLAKVINTELDRL 251

Query: 232 MQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHS 291
               +   A       A++G  V+    K +           G    Y   +        
Sbjct: 252 FPKEIQILAEPGRFLAAVSGTSVAKVIGKAVRDGKTCYYINDGVYHTYSGVIFDHCKYPV 311

Query: 292 PSVFLGGKGFIKGYMVPILG-------KITMDMTMFDITDSLSIEVGDYI 334
            +   G           + G        ++M        +   ++ GD++
Sbjct: 312 KAFKKGPTSL-----CSVFGPTCDALDVVSM------AENLPDLQRGDFV 350


>gi|163797415|ref|ZP_02191367.1| alanine racemase-like protein [alpha proteobacterium BAL199]
 gi|159177334|gb|EDP61891.1| alanine racemase-like protein [alpha proteobacterium BAL199]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 21/71 (29%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNA--RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L IDL A + N   M   + +   R     K          +A A  + G        V 
Sbjct: 21 LVIDLDAFERNLDRMAKFAHDTGIRVRPHAKT----HKSPAVARAQMHRGAVGQCCQKVG 76

Query: 67 EGVKLRLYTPQ 77
          E   L     +
Sbjct: 77 EAEVLVQAGIE 87


>gi|90418748|ref|ZP_01226659.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336828|gb|EAS50533.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+++      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LIVDLDIVEDNFNAFRKALPDSAIFYAVKANP----APEVLKLLAGLG-SNFDCASVAEV 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                     R          +  I     L   + +V  +    K+           
Sbjct: 75  EMALNAGATPRRISYGNTIKKERDIARAHQLGVALFAVDCVEEVEKVARAAPGARVFC 132


>gi|218246529|ref|YP_002371900.1| alanine racemase domain-containing protein [Cyanothece sp. PCC
           8801]
 gi|218167007|gb|ACK65744.1| alanine racemase domain protein [Cyanothece sp. PCC 8801]
          Length = 224

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 30/229 (13%)

Query: 13  LTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIA----PALYNAGVQDFFVTSVEEG 68
           L  ++ N         + R  AV K         +++       Y AGV+DF  + ++E 
Sbjct: 7   LDQIRQNI------PPHVRLIAVTK---------QVSIDAIKEAYQAGVRDFAESRLQEA 51

Query: 69  V-------KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           +        LR  +      +         +     + +  +    +L   +   S   +
Sbjct: 52  LPKQAQLQDLRDISWHFIGHLQANKAKKILEHFHWIHSVDNLKIAQRLNRLAAEESIDPN 111

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++    N+ G  + E +         +  ++  +++ L         + + Q  +
Sbjct: 112 ICLQVKILPDPNKYGWQVSELIADLPQLEQCQQLKIQGLMTILPLGLSDKEILAAFQQTK 171

Query: 182 FRTLISHYKGI----EASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
                 + +      E S+  S   LL       + R G  ++G  + I
Sbjct: 172 VLETQINNQSTLSLNELSMGMSGDYLLAIQAGATMIRLGTIIFGERNSI 220


>gi|222087145|ref|YP_002545680.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84]
 gi|221724593|gb|ACM27749.1| ornithine decarboxylase protein [Agrobacterium radiobacter K84]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       ++   L + G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFRAFRHAMPDSAIYYAVKANP----APEVLRLLASLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALDAGATAARISFGNTIKKERDVARAHALGISLFAVDSHEEVEKISRAAPGARVFC 132


>gi|332827252|gb|EGK00022.1| hypothetical protein HMPREF9455_03611 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 367

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 65/214 (30%), Gaps = 13/214 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
           L +    ++ N      ++    +    VK N       ++   +  +G+  +   ++ E
Sbjct: 18  LVVYPERIQENIDLAIQIARGTNKLRPHVKTN----KMREVCAIMLKSGITKYKCATIAE 73

Query: 68  GVKLRLYTPQARIFVLYGIHPGQEK-------IIFDTNLIPVISSVPQLTFYSKLMSCGV 120
              L L      +     + P  E+                V +               +
Sbjct: 74  AEMLALVNAPDVLLAYQPVGPKIERLIELIKAYPDTRFSCLVDNEENAKAISDLCRENNI 133

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACA-DDPSSHVNSVQL 179
           +    + ++ G +R G+  ++A+D      +     ++ +  +     D+ +        
Sbjct: 134 TLNIFIDLNIGMDRTGIKPEKAIDLVQAIIDLPRIHIAGLHGYDGHIHDEDTEIRCKKSD 193

Query: 180 ERFRTLISHYKGIEASLASSSGILLGPNYHFQLT 213
             F      YK I+  L     +++G    F + 
Sbjct: 194 ISFALAEKAYKEIKPLLPHPIALVMGGTPTFPIH 227


>gi|315426064|dbj|BAJ47711.1| alanine racemase domain protein [Candidatus Caldiarchaeum
          subterraneum]
          Length = 366

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +D+  LK N   M   +     +    VK         +IA     AG     V  + 
Sbjct: 17 LIVDVKVLKRNITEMADFARSLGKKLRPHVKT----HKTPEIAWMQMEAGADGICVQKLG 72

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 73 EAEVMAEAGLD 83


>gi|315425297|dbj|BAJ46964.1| alanine racemase domain protein [Candidatus Caldiarchaeum
          subterraneum]
          Length = 360

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +D+  LK N   M   +     +    VK         +IA     AG     V  + 
Sbjct: 11 LIVDVKVLKRNITEMADFARSLGKKLRPHVKT----HKTPEIAWMQMEAGADGICVQKLG 66

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 67 EAEVMAEAGLD 77


>gi|153011211|ref|YP_001372425.1| alanine racemase domain-containing protein [Ochrobactrum anthropi
           ATCC 49188]
 gi|151563099|gb|ABS16596.1| alanine racemase domain protein [Ochrobactrum anthropi ATCC 49188]
          Length = 354

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 37/149 (24%), Gaps = 12/149 (8%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +K N     A +     +    +K           A     AG        + E 
Sbjct: 17  IDIDRVKANIAKAQAHADAVGVKLRPHIKT----HKLPLFAKMQVEAGATGITCQKLGEA 72

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTF-----YSKLMSCGVSHP 123
             +              +   +   +   +    +S             ++         
Sbjct: 73  EVMADAGLTNIFLPYNILGQEKLDRLHTLHQRITLSVTVDNRTSLAGLAARFTDEKHPLK 132

Query: 124 YALQVDTGFNRLGLS-LQEALDFTHNSFN 151
             ++ DTG  R G+    EAL+       
Sbjct: 133 VLVECDTGMGRCGVQTPAEALELARIIDQ 161


>gi|299135496|ref|ZP_07028685.1| alanine racemase domain protein [Afipia sp. 1NLS2]
 gi|298589751|gb|EFI49957.1| alanine racemase domain protein [Afipia sp. 1NLS2]
          Length = 366

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 7/57 (12%)

Query: 9  LKIDLTALKNNWHSMNALS---GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
          L +DL A++ N  ++ A      + R     K         +IA     AG      
Sbjct: 21 LIVDLDAMEANIKALAARVAAYPSVRVTPHAKA----HKSVEIARRQMAAGAARMCC 73


>gi|296446216|ref|ZP_06888163.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b]
 gi|296256253|gb|EFH03333.1| Orn/DAP/Arg decarboxylase 2 [Methylosinus trichosporium OB3b]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ S      + R    VK N       ++   L   G   F   SV E
Sbjct: 23 LVVDLDIVRDNYQSFARALPDTRVFYAVKANP----APEVLALLARLG-SCFDTASVVE 76


>gi|209519839|ref|ZP_03268623.1| alanine racemase domain protein [Burkholderia sp. H160]
 gi|209499715|gb|EDZ99786.1| alanine racemase domain protein [Burkholderia sp. H160]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/101 (11%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 46  EKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLI 100
            ++  A   AG +   V++++E            ++ +  +          +       +
Sbjct: 46  IEVVRAQIAAGARGITVSTLKEAEAFFAAGIDDILYAVSMVPSKLPRALALRRRGCDLKL 105

Query: 101 PVISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQE 141
            V +        +     G +    ++VDT  +R G+  ++
Sbjct: 106 VVDNPTAAAAIAAFGDQHGETFEVWIEVDTDGHRSGIQPEQ 146


>gi|294508466|ref|YP_003572524.1| Alanine racemase [Salinibacter ruber M8]
 gi|294344794|emb|CBH25572.1| Alanine racemase [Salinibacter ruber M8]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 34/138 (24%), Gaps = 11/138 (7%)

Query: 9   LKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L I+   L+ N  +M A   + +      VK          IA      G     V +V 
Sbjct: 11  LLIEQARLQANLAAMQATANANDVTLRPHVKT----HKSVAIAEQQQQRGATGLTVATVH 66

Query: 67  EGVKLRLYTPQARIFVLY--GIHPGQ---EKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           E                   G    +         T    V +        +        
Sbjct: 67  EAEAFVAAGFDDVRVAYPVVGRPKHERLRALRAAATLSFTVDTMAGADQASAVHAGADNP 126

Query: 122 HPYALQVDTGFNRLGLSL 139
               ++VD G  R G+  
Sbjct: 127 VEVLMEVDVGHGRCGVHW 144


>gi|319406162|emb|CBI79799.1| lysine/ornithine decarboxylase [Bartonella sp. AR 15-3]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 41/164 (25%), Gaps = 5/164 (3%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H +E   L +DL  +  N+ +       +R    +K N       +I   L + G   F 
Sbjct: 13  HRSEGPCLVVDLDVVHENYLNFEKALPQSRIFYAIKANP----APEILRLLVSLG-SSFD 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             S+ E          A           +  I         + +V       K+      
Sbjct: 68  AASIAEIEMALEAGATADRISFGNTIKKERDIARAYAFGVSLYAVDCFEEVEKVACAAPG 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA 165
                +V T        L +      +     L     +     
Sbjct: 128 ARVFCRVLTDGEGAEWPLSQKFGCVPSMAVDVLRYAHHLGLQAC 171


>gi|118590930|ref|ZP_01548330.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
 gi|118436452|gb|EAV43093.1| ornithine decarboxylase [Stappia aggregata IAM 12614]
          Length = 406

 Score = 40.4 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 14 TALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
            LK++     +L       AV K N    G   +  AL  AG+  F V S  E   ++ 
Sbjct: 26 DVLKHDAQQFQSLFPGKTAYAV-KTN----GEPFVLEALAKAGISCFDVASPAEFASVKK 80

Query: 74 YTPQARIFVLYG 85
            P+A +  ++ 
Sbjct: 81 AAPKAEMLYMHP 92


>gi|148657962|ref|YP_001278167.1| alanine racemase domain-containing protein [Roseiflexus sp. RS-1]
 gi|148570072|gb|ABQ92217.1| alanine racemase domain protein [Roseiflexus sp. RS-1]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 17/75 (22%), Gaps = 6/75 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            IDL  L+ N             A    +K         +IA     AG        + 
Sbjct: 11 AIIDLDRLERNIARFQTYLSQHGIANRPHIKT----HKIPQIARMQMAAGAVGITCQKLG 66

Query: 67 EGVKLRLYTPQARIF 81
          E   +          
Sbjct: 67 EAEVMADAGIDDIFI 81


>gi|148255000|ref|YP_001239585.1| putative amino acid processing enzyme-like protein
          [Bradyrhizobium sp. BTAi1]
 gi|146407173|gb|ABQ35679.1| putative amino acid processing enzyme-related protein (aldolase
          or racemase) [Bradyrhizobium sp. BTAi1]
          Length = 359

 Score = 40.4 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ID+  ++ N   + A    A  A    +K         ++A     AG Q      + 
Sbjct: 18 AVIDMDRVERNIARIQAQCAAAGVANRPHIKT----HKSPELAKLQIAAGAQGITCQKIG 73

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 74 EAEIMAEAGID 84


>gi|150397970|ref|YP_001328437.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419]
 gi|150029485|gb|ABR61602.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium medicae WSM419]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       ++   L + G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFKAFRHALPDSAIYYAVKANP----APEVLRLLASLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                                +  +     L   + +V       K+           
Sbjct: 75  EMALDAGATPNRISYGNTIKKERDVARAHTLGISLFAVDSHEEVEKIARAAPGARVFC 132


>gi|119715651|ref|YP_922616.1| alanine racemase domain-containing protein [Nocardioides sp. JS614]
 gi|119536312|gb|ABL80929.1| alanine racemase domain protein [Nocardioides sp. JS614]
          Length = 386

 Score = 40.4 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 18/73 (24%)

Query: 11  IDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           +DL  ++ N  SM +L+         +A++               IA    +AG     +
Sbjct: 38  VDLDQVERNIASMASLAKRRGMTLRPHAKS----------HKSTFIADLQLDAGATGLCL 87

Query: 63  TSVEEGVKLRLYT 75
            +  E   +  + 
Sbjct: 88  ATAGEAEVMWRHG 100


>gi|163761098|ref|ZP_02168175.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43]
 gi|162281649|gb|EDQ31943.1| ornithine decarboxylase [Hoeflea phototrophica DFL-43]
          Length = 417

 Score = 40.4 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 5/72 (6%)

Query: 14  TALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
             LK +      L       AV K N    G   +   L  AGV+ F V S  E   +R 
Sbjct: 37  DVLKQDARQFMKLFPGETAYAV-KTN----GEPMVLKTLVEAGVKIFDVASPGEFEAVRA 91

Query: 74  YTPQARIFVLYG 85
            +P A +  ++ 
Sbjct: 92  ASPDAEMLYMHP 103


>gi|27382870|ref|NP_774399.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110]
 gi|27356043|dbj|BAC53024.1| ornithine decarboxylase [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ + +    ++R    VK N       ++   L + G   F   +V E
Sbjct: 23 LVVDLEVVRDNYQTFSKALPDSRVFYAVKANP----APEVLALLASMG-SCFDTATVAE 76


>gi|323463814|gb|ADX75967.1| amino acid racemase, putative [Staphylococcus pseudintermedius
           ED99]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 7/164 (4%)

Query: 6   FLRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             ++ I+L+ +K N   +  +      R   V K      G  K+       G      +
Sbjct: 1   MPQIHINLSKIKYNAMVLQHMLAEQGIRMIPVTKCMG---GDPKVRQQFREMGFNTLSES 57

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC-GVSH 122
            +   +      P     ++ G  P +   +   + I + + +  +   S      GV H
Sbjct: 58  RLT-AMMTNEQHPTEHDMMIKGALPNEIHDVVRYSQISIQTELETIRALSDEAVAQGVKH 116

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLAC 166
              L VD    R G    E +         K   L  +  +  C
Sbjct: 117 HIYLMVDWKDGREGALTYEVVPLIKQIIRLKGVYLKGLSFNFMC 160


>gi|253582195|ref|ZP_04859418.1| serine racemase [Fusobacterium varium ATCC 27725]
 gi|251835734|gb|EES64272.1| serine racemase [Fusobacterium varium ATCC 27725]
          Length = 369

 Score = 40.0 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 92/331 (27%), Gaps = 34/331 (10%)

Query: 20  WHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ 77
             +   +          ++K         ++      AG       +++E         +
Sbjct: 22  IKTYQKMCTNNGKELWPMIKT----HKSMELLKMQIEAGATGALCGTLDEAEACCKIGLK 77

Query: 78  ARIFVLYGIHPGQEKIIFDT----NLIPVISSVPQLTFYSKLMSCGVSHP-YALQVDTGF 132
             ++          + + +     + I  I ++      + +     +   Y + VD+G 
Sbjct: 78  KIMYAYPVASKESIERVIELTKKSDFIIRIDNLEAAKMINDMAVAADTVVSYTIIVDSGL 137

Query: 133 NRLGLSLQEALDFT-----HNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLIS 187
           +R GL + + ++F            +         + A  ++        + +   T   
Sbjct: 138 HRFGLPVNKIVEFADKLKTMKGLKLRGISTHPGHVYSATCENEVHKYVIDECKTLDTAKK 197

Query: 188 HYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRK 247
           +       L           Y    + P  S       IN  HP   V     ++ + + 
Sbjct: 198 YMNDAGYEL----------EYITSGSTPTFSEAVKDKNINVLHPGNYVFLDSIQLSIKKA 247

Query: 248 ALAGELVSYGGQKKLTRDSLIAVAAIGY-ADGYPLTLSGLDSEHSPSVFLGGKGFIKGYM 306
            +    ++            + +   G    G      G +S       +G    I   +
Sbjct: 248 EINDCALTVYATIISHPKEDLFICDAGAKCLGLDQGAHGNNSIVGFGTVIGHPEVIVASL 307

Query: 307 VPILGKITMDMTMFDITDSLSIEVGDYIQIF 337
              +GK         I    +++VGD I+I 
Sbjct: 308 SEEVGK-------LHIHGETNLKVGDKIEII 331


>gi|298293889|ref|YP_003695828.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506]
 gi|296930400|gb|ADH91209.1| Orn/DAP/Arg decarboxylase 2 [Starkeya novella DSM 506]
          Length = 376

 Score = 40.0 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          + +DL  +++N+ +      + R    VK N        I  AL   G   F   SV E 
Sbjct: 19 VVVDLDVVRSNYAAFARALPDTRVFYAVKANP----DPAILSALAELG-SCFDCASVNEI 73

Query: 69 VKLRLYT 75
          +      
Sbjct: 74 LMALAAG 80


>gi|229591485|ref|YP_002873604.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens
           SBW25]
 gi|229363351|emb|CAY50481.1| putative metal-activated pyridoxal enzyme [Pseudomonas fluorescens
           SBW25]
          Length = 378

 Score = 40.0 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 48/175 (27%), Gaps = 11/175 (6%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +++N   M         R    +K       C  +  A   AG     V++++E 
Sbjct: 15  IDIPRMQHNIQRMQQRMNTLGVRLRPHIKT----SKCLPVIQAQLAAGASGVTVSTLKEA 70

Query: 69  VKLRLYTPQARIF---VLYGIHPGQEKIIFDTNLIP--VISSVPQLTFYSKLMSCGVSHP 123
                       +   V  G  P    +      +     S        +          
Sbjct: 71  QHCFSQGILDVFYAVAVAPGKLPQALALRRQGCNLSLLTDSVAGAQALVAFAQQHDERLD 130

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
             +++D   +R GL+ ++             G     +   A +        ++Q
Sbjct: 131 VWIEIDCDGHRSGLAAEDEALLDVARILSDGGMHLRGVMTHAGSSYELDTPEALQ 185


>gi|163851469|ref|YP_001639512.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
 gi|163663074|gb|ABY30441.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium extorquens PA1]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  ++ N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRENYTAFARALPDTRVFYAVKANP----AAEVLRLLAEMG-SCFDTASVAE 76


>gi|159901911|gb|ABX10644.1| alanine racemase [uncultured planctomycete 3FN]
          Length = 363

 Score = 40.0 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 35/142 (24%), Gaps = 23/142 (16%)

Query: 11  IDLTALKNNWHSM--------NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           IDL  L  N  +M             + +                IA     AG      
Sbjct: 17  IDLNQLDANIKTMADFIISRGKQWRPHEKC----------HKTPAIALKQIAAGAIGVTC 66

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL-----IPVISSVPQLTFYSKLMS 117
             V E   +        +     +   + + +          I            +    
Sbjct: 67  AKVSEAEVMAAAGIHDILIANMIVGTPKWERVAALCRTTDVIIACDHFAQVEPLAAICRR 126

Query: 118 CGVSHPYALQVDTGFNRLGLSL 139
            GV+    ++VD G NR+G   
Sbjct: 127 NGVTCRVIVEVDIGLNRVGTRP 148


>gi|242240514|ref|YP_002988695.1| alanine racemase domain protein [Dickeya dadantii Ech703]
 gi|242132571|gb|ACS86873.1| alanine racemase domain protein [Dickeya dadantii Ech703]
          Length = 423

 Score = 40.0 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 28/99 (28%), Gaps = 15/99 (15%)

Query: 14  TALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALY-----NAGVQDFFVTSVE 66
           +AL++N   + A         AA         G   ++PA+        G       +  
Sbjct: 55  SALEHNLRQLAAFCRENGVLLAA--------HGKTSMSPAILRRAITEGGAWGLSAATPA 106

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS 105
           +   LR +  +  +     + P   + +           
Sbjct: 107 QVRALRQFGIRNVLLANELVDPAGIRWVAQYQQQHPEHD 145


>gi|240138634|ref|YP_002963106.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
          [Methylobacterium extorquens AM1]
 gi|240008603|gb|ACS39829.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
          [Methylobacterium extorquens AM1]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRDNYTAFARALPDTRVFYAVKANP----AAEVLRLLAEMG-SCFDTASVAE 76


>gi|218530277|ref|YP_002421093.1| ornithine decarboxylase [Methylobacterium chloromethanicum CM4]
 gi|218522580|gb|ACK83165.1| Ornithine decarboxylase [Methylobacterium chloromethanicum CM4]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRDNYTAFARALPDTRVFYAVKANP----AAEVLRLLAEMG-SCFDTASVAE 76


>gi|254561232|ref|YP_003068327.1| ornithine/diaminopimelate PLP-dependent decarboxylase
          [Methylobacterium extorquens DM4]
 gi|254268510|emb|CAX24467.1| putative ornithine/diaminopimelate PLP-dependent decarboxylase
          [Methylobacterium extorquens DM4]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRDNYTAFARALPDTRVFYAVKANP----AAEVLRLLAEMG-SCFDTASVAE 76


>gi|188581259|ref|YP_001924704.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
 gi|179344757|gb|ACB80169.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium populi BJ001]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRDNYTAFARALPDTRVFYAVKANP----APEVLRLLAEMG-SCFDTASVAE 76


>gi|145296605|ref|YP_001139426.1| hypothetical protein cgR_2513 [Corynebacterium glutamicum R]
 gi|140846525|dbj|BAF55524.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 380

 Score = 40.0 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 32/134 (23%), Gaps = 18/134 (13%)

Query: 11  IDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           ID   L  N   M         AL  + +T              +IA    +AG +    
Sbjct: 47  IDRERLTANIFKMAAHAAANGIALRPHVKT----------HKIIEIAQMQVDAGARGITC 96

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
            +V E                            +     +   V  +             
Sbjct: 97  ATVGEAEIFAGAGFTDIFIAYPLYLTDHAVQRLNAIPGAISIGVDSVEMAQATAGLREDI 156

Query: 123 PYALQVDTGFNRLG 136
              ++VD+G  R G
Sbjct: 157 KALIEVDSGHRRSG 170


>gi|121534334|ref|ZP_01666158.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1]
 gi|121307104|gb|EAX48022.1| Lysine decarboxylase [Thermosinus carboxydivorans Nor1]
          Length = 385

 Score = 40.0 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 5/75 (6%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          L +    ++ N++ +            +K N       +I   L   G   F V S  E 
Sbjct: 24 LVLSRDQIRYNYNFLAEHLPGVHIYYAMKANP----DPRIIDELAGLGA-CFDVASDGEI 78

Query: 69 VKLRLYTPQARIFVL 83
          + L          V 
Sbjct: 79 LALAQMGIAPERIVY 93


>gi|121602552|ref|YP_989352.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583]
 gi|120614729|gb|ABM45330.1| pyridoxal-dependent decarboxylase [Bartonella bacilliformis KC583]
          Length = 377

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 39/137 (28%), Gaps = 5/137 (3%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H +E   L +DL  +  N+ +       +R    VK N       +I   L + G   F 
Sbjct: 13  HRSEGPCLVVDLDIVHENYLNFEKALPQSRIFYAVKANP----APEILRLLVSLG-SSFD 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             SV E   +      A           +  I     L   + +V  +    K+      
Sbjct: 68  AASVAEIKMILESGATAERISFGNTIKKERDIASAHALGVSLYAVDCIEEVEKVARAAPG 127

Query: 122 HPYALQVDTGFNRLGLS 138
                +V T        
Sbjct: 128 ARVFCRVLTNGEGAEWP 144


>gi|220926699|ref|YP_002502001.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
 gi|219951306|gb|ACL61698.1| Orn/DAP/Arg decarboxylase 2 [Methylobacterium nodulans ORS 2060]
          Length = 403

 Score = 39.6 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 12 DLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
          DL+AL     ++ A L         VK N       ++  AL    V  F V S  E V+
Sbjct: 27 DLSALGEQARALRAPLPPGTDFFYAVKAN----NDPQVLRALAPH-VAGFEVASAGEIVR 81

Query: 71 LRLYTPQARIFVLYGI 86
          +R     A   V+ G 
Sbjct: 82 VRQAVGSAARIVMGGP 97


>gi|33595153|ref|NP_882796.1| putative metal-activated pyridoxal enzyme [Bordetella parapertussis
           12822]
 gi|33565230|emb|CAE36028.1| putative metal-activated pyridoxal enzyme [Bordetella
           parapertussis]
          Length = 361

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 49/167 (29%), Gaps = 11/167 (6%)

Query: 14  TALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
             +++N   M              VK       C  +A A   AG +   V++++E  + 
Sbjct: 2   ARMQHNIARMQDRMNGLGVSLRPHVKT----SKCTPVALAQLAAGARGVTVSTLKEAEQF 57

Query: 72  RLYTPQARIF---VLYGIHPGQEKIIFDTNL--IPVISSVPQLTFYSKLMSCGVSHPYAL 126
                   ++   +     P    +        I   ++    T      +        +
Sbjct: 58  FAAGIADILYAVGMAEHRLPAALALRRRGCDLKIITDNAESARTIADFGRAHDEVFEVWI 117

Query: 127 QVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           ++DT  +R G+  +EA      +   + G     +   A +      
Sbjct: 118 EIDTDGHRSGIKPEEAALLAVGAALHEGGMRLGGVMTHAGSSYDLDT 164


>gi|90426308|ref|YP_534678.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18]
 gi|90108322|gb|ABD90359.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB18]
          Length = 380

 Score = 39.6 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ S      ++R    VK N       ++   L + G   F   SV+E
Sbjct: 23 LVVDLDVVRDNFQSFAKALPDSRVFYAVKANP----APEVLSLLASMG-SCFDCASVQE 76


>gi|152981283|ref|YP_001351715.1| low-specificity D-threonine aldolase [Janthinobacterium sp.
          Marseille]
 gi|151281360|gb|ABR89770.1| low-specificity D-threonine aldolase [Janthinobacterium sp.
          Marseille]
          Length = 379

 Score = 39.6 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 19/71 (26%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L +DL A ++N   +    L    +  +  K          IA     AG        V 
Sbjct: 29 LLVDLDAFEDNLARVHTRVLQAGLKVRSHGKA----HKSPAIAHRQLAAGATGICCQKVS 84

Query: 67 EGVKLRLYTPQ 77
          E          
Sbjct: 85 EAEIFVEAGIT 95


>gi|52842730|ref|YP_096529.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629841|gb|AAU28582.1| metal-activated pyridoxal enzyme [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 384

 Score = 39.6 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 54/195 (27%), Gaps = 27/195 (13%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L ID   LK N   M          +  + +T            C +IA      G    
Sbjct: 26  LVIDYEKLKYNLKVMQQHGFEWGIGIRPHCKT----------HKCTQIARLQLEYGAIGI 75

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSC 118
               + E   L        +     +   +   +F+           V        L   
Sbjct: 76  SAAKLSEAEVLVSKQITNVLITSPIVSEAKYSRLFNCLKSAPDLMLVVDGKDNIRMLNEL 135

Query: 119 GVSHPYALQ----VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           G S    +     +D+G  R G++ + AL++ H   +    +L  I      A       
Sbjct: 136 GKSLNQPVYVLLDIDSGIGRTGINPEVALEYGHFINSMNWLKLKGIQC---YAGHLQHIQ 192

Query: 175 NSVQLERFRTLISHY 189
           N  + + F   I   
Sbjct: 193 NYEERKAFSLRIMDM 207


>gi|323467193|gb|ADX70880.1| AAE family aspartate:alanine exchanger [Lactobacillus helveticus
           H10]
          Length = 552

 Score = 39.6 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRI 361
           ITD   + VGD++ I GP    + +  A  T  Y+ +  I
Sbjct: 337 ITDYTRLTVGDHVTIIGP---ANYLTNAIKTIGYEKVTGI 373


>gi|229494232|ref|ZP_04387995.1| D-amino acid deaminase [Rhodococcus erythropolis SK121]
 gi|229318594|gb|EEN84452.1| D-amino acid deaminase [Rhodococcus erythropolis SK121]
          Length = 436

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 18/104 (17%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           + ++  A+ +N   M          L+ +A+T              ++     +AG    
Sbjct: 58  MTLNRAAIAHNVALMAQFCSDHDVDLAPHAKTTM----------SPELVRRQLDAGAWAM 107

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS 104
              +V +   LR +     I     + P   + I D        
Sbjct: 108 TAATVAQARILREFGVDTIIIASQVLDPAGIRWICDAQATDPDF 151


>gi|206562454|ref|YP_002233217.1| putative alanine racemase [Burkholderia cenocepacia J2315]
 gi|198038494|emb|CAR54452.1| putative alanine racemase [Burkholderia cenocepacia J2315]
          Length = 376

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 11/180 (6%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           +H+       ID+  ++ N   M     +   R    VK       C  +  A   AG Q
Sbjct: 3   LHTLNTPAALIDVGRMQRNIARMQTHLDALGVRFRPHVKT----TKCRHVVDAQIAAGAQ 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYS 113
              V++++E  +   +  +  ++ +  +          +       I   S        +
Sbjct: 59  GITVSTLKEAEQFFAHGIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAQAIAA 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                G      ++VD   +R G+  +  L           G L   +   A +      
Sbjct: 119 FGREHGERFDVWIEVDVDGHRSGIPPEADLLIDVGRALTGGGTLLGGVLAHAGSSYEHDT 178


>gi|20091552|ref|NP_617627.1| ornithine decarboxylase [Methanosarcina acetivorans C2A]
 gi|19916709|gb|AAM06107.1| ornithine decarboxylase [Methanosarcina acetivorans C2A]
          Length = 390

 Score = 39.6 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L IDL  ++ ++  +      A+    VK N      +++  AL + G  +F V ++ E
Sbjct: 34 LVIDLQKIERSYEELVEHMPFAKIHYAVKANP----MDRVVLALKDKG-SNFDVATIYE 87


>gi|23012520|ref|ZP_00052584.1| COG0019: Diaminopimelate decarboxylase [Magnetospirillum
          magnetotacticum MS-1]
          Length = 274

 Score = 39.6 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  ++ N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRENYTAFARALPDTRVFYAVKANP----AAEVLRLLAEMG-SCFDTASVAE 76


>gi|254249069|ref|ZP_04942389.1| Alanine racemase [Burkholderia cenocepacia PC184]
 gi|124875570|gb|EAY65560.1| Alanine racemase [Burkholderia cenocepacia PC184]
          Length = 376

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 11/147 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           +H+       ID+  ++ N   M     +   R    VK       C ++      AG Q
Sbjct: 3   LHTLNTPAALIDVARMQRNIARMQTHLDALGVRFRPHVKT----TKCRQVVDVQIAAGAQ 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYS 113
              V++++E  +   +  +  ++ +  +          +       I   S        +
Sbjct: 59  GITVSTLKEAEQFFAHGIRDIVYAVDMVPAKLGQALALRRQGCDLKIVADSLPAAHAIAA 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQ 140
                G      ++VD   +R G+   
Sbjct: 119 FGREHGERFDVWIEVDVDGHRSGIPPD 145


>gi|86751645|ref|YP_488141.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2]
 gi|86574673|gb|ABD09230.1| ornithine decarboxylase [Rhodopseudomonas palustris HaA2]
          Length = 380

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ S      ++R    VK N       ++   L + G   F   SV+E
Sbjct: 23 LVVDLDVVRDNFASFAKALPDSRVFYAVKANP----APEVLSLLASLG-SCFDCASVQE 76


>gi|226227945|ref|YP_002762051.1| hypothetical protein GAU_2539 [Gemmatimonas aurantiaca T-27]
 gi|226091136|dbj|BAH39581.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 397

 Score = 39.3 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 18/61 (29%), Gaps = 6/61 (9%)

Query: 11 IDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          +DL  L +N   M A       +    VK         +IA      G       ++ E 
Sbjct: 34 VDLDRLAHNLDRMAAYVTLHGLKLRPHVKT----HKSPRIAAEQLRLGAVGLSCATLREA 89

Query: 69 V 69
           
Sbjct: 90 E 90


>gi|190893472|ref|YP_001980014.1| ornithine decarboxylase [Rhizobium etli CIAT 652]
 gi|190698751|gb|ACE92836.1| probable ornithine decarboxylase protein [Rhizobium etli CIAT 652]
          Length = 377

 Score = 39.3 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+H+      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFHAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  I     L   + +V       K+           
Sbjct: 75  EMALEAGATAARISFGNTIKKERDIARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|226304478|ref|YP_002764436.1| hypothetical protein RER_09890 [Rhodococcus erythropolis PR4]
 gi|226183593|dbj|BAH31697.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 436

 Score = 39.3 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 18/98 (18%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           + +D  A+ +N   M          L+ +A+T              ++     +AG    
Sbjct: 58  MTLDRAAIAHNVDLMAQFCSDHDVDLAPHAKTTM----------SPELVRRQLDAGAWAM 107

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN 98
              +V +   LR +     I     + P   + I D  
Sbjct: 108 TAATVAQARILREFGVDTIIIASQVLDPAGIRWICDAQ 145


>gi|91789931|ref|YP_550883.1| putative threonine aldolase [Polaromonas sp. JS666]
 gi|91699156|gb|ABE45985.1| putative threonine aldolase [Polaromonas sp. JS666]
          Length = 400

 Score = 39.3 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 25/105 (23%), Gaps = 18/105 (17%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L IDL A+K N   M   +         +A+                +A     AG    
Sbjct: 31  LVIDLDAMKRNLGRMAEFAKKHSIRWRPHAKM----------HKSASLAKLQIKAGAVGV 80

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS 105
            V    E   +              I P +   +          S
Sbjct: 81  CVQKTAEAEAMVAGGVYDVYISNEVIAPAKLARVAALTQKVAPHS 125


>gi|85714753|ref|ZP_01045740.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp.
           Nb-311A]
 gi|85698638|gb|EAQ36508.1| probable diaminopimelate decarboxylase protein [Nitrobacter sp.
           Nb-311A]
          Length = 392

 Score = 39.3 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 58/230 (25%), Gaps = 32/230 (13%)

Query: 12  DLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           DL  L+    ++   L    +    +K N+       I  AL       F V S+ E   
Sbjct: 23  DLAHLRRRADTLRRCLPAQCKLFYAIKANS----DAPILRALL-HRTDGFEVASLGEIQA 77

Query: 71  LRLYTPQARIFVLYGIH---PGQEKIIFDT-NLIPVISSVPQLTFYSKLMSCGV------ 120
           +R       + V++G       + +   D   L+  + S  QL     +           
Sbjct: 78  VR--GINDAVPVVFGGPGKTDAELEGALDQGVLLIHVESEHQLRRLDWIARRRNQRADIL 135

Query: 121 ------SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                 S P    +  G       ++EA           L  + L   H+    +     
Sbjct: 136 LRVNPASVPQQATLRMGGQATQFGIEEAQIPALIELALGLPGVRLRGLHIHSISNNLDAQ 195

Query: 175 NSVQLERFRTLISHYKGIEASLASSS--------GILLGPNYHFQLTRPG 216
             + L      ++        L                 P   F      
Sbjct: 196 THLALLEHYFDLTSTWQRRYQLEFDWLNAGGGIGINYANPQASFDWEGFC 245


>gi|241206375|ref|YP_002977471.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860265|gb|ACS57932.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 377

 Score = 39.3 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+H+      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFHAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|256823045|ref|YP_003147008.1| bifunctional aspartate kinase/diaminopimelate decarboxylase protein
           [Kangiella koreensis DSM 16069]
 gi|256796584|gb|ACV27240.1| aspartate kinase [Kangiella koreensis DSM 16069]
          Length = 853

 Score = 39.3 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 66/198 (33%), Gaps = 22/198 (11%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           +L A+  N  ++ ++S   +    VK N       ++    Y  G+  F   S+ E  ++
Sbjct: 502 NLAAVAENIKNLQSISAVDQIFFAVKAN--NH--PQVLTTAYEQGI-GFETVSIFEVERI 556

Query: 72  RLYTP----QARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSC--------- 118
           +   P        F        + +   D  ++  + S   L +++K  +          
Sbjct: 557 KELFPAIDTNRIFFTPNFASHNEYQKALDYGVMLSLDSSYPLKYWAKTFANKTIFLRIDP 616

Query: 119 --GVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             G  H   ++     ++ G+ +QE  +         +    L +   A +   ++   +
Sbjct: 617 NVGKGHHENVRTAGATSKFGIPIQELEELLPIIKEHNI--KVLGLHAHAGSGILTNEHWA 674

Query: 177 VQLERFRTLISHYKGIEA 194
                  ++   +  ++ 
Sbjct: 675 EHARLLASVAKQFPDVKY 692


>gi|325001747|ref|ZP_08122859.1| metal-activated pyridoxal enzyme [Pseudonocardia sp. P1]
          Length = 336

 Score = 39.3 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 4/59 (6%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +D +AL+ N   M A+    R    VK         +++      G   F   +V E
Sbjct: 11 LVVDASALEANLADMAAVLPGPRLRPHVKA----HKTTELSRRQLAHGHAGFTCATVRE 65


>gi|257059562|ref|YP_003137450.1| alanine racemase [Cyanothece sp. PCC 8802]
 gi|256589728|gb|ACV00615.1| alanine racemase domain protein [Cyanothece sp. PCC 8802]
          Length = 224

 Score = 39.3 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 57/180 (31%), Gaps = 26/180 (14%)

Query: 13  LTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIA----PALYNAGVQDFFVTSVEEG 68
           L  ++ N         + R  AV K         +++       Y AGV+DF  + ++E 
Sbjct: 7   LDQIRQNI------PPHVRLIAVTK---------QVSIDAIKEAYQAGVRDFAESRLQEA 51

Query: 69  V-------KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           +        LR  +      +         +     + +  +    +L   +   S   +
Sbjct: 52  LPKQAQLQDLRDISWHFIGHLQANKAKKILEHFHWIHSVDNLKIAQRLNRLAAEESIDPN 111

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLER 181
               +++    N+ G  + E +         +  ++  +++ L         + + Q  +
Sbjct: 112 ICLQVKILPDPNKYGWQVSELIADLPQLEQCQQLKIQGLMTILPLGLSDKEILAAFQQTK 171


>gi|330953813|gb|EGH54073.1| alanine racemase [Pseudomonas syringae Cit 7]
          Length = 378

 Score = 39.3 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 51/174 (29%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYS-----KLMSCGVSHPY 124
                      + +       E+ +        +S +      +        +       
Sbjct: 72  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSLLTDSVAAARAIVVFGQAHDERFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++ +A            G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVDDASLVEVARTLVDGGMQLRGVMTHAGSSYDLDTPAALQ 185


>gi|295699224|ref|YP_003607117.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
 gi|295438437|gb|ADG17606.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
          Length = 382

 Score = 39.3 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 43/138 (31%), Gaps = 11/138 (7%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++ N   M              VK       C  +  A   AG +   V++++E 
Sbjct: 13  IDVARMQKNIARMQGRMNELGVAFRPHVKT----TKCIDVVRAQIAAGARGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
                      ++ +  +          +       + V +        +     G +  
Sbjct: 69  EAFFAAGVDDILYAVSMVPSKLPRALALRRQGCDLKLVVDNPTAAAALAAFGDQHGETFE 128

Query: 124 YALQVDTGFNRLGLSLQE 141
             ++VDT  +R G+  ++
Sbjct: 129 VWIEVDTDGHRSGIQPEQ 146


>gi|50059369|gb|AAT69409.1| alanine racemase [Borrelia burgdorferi N40]
          Length = 52

 Score = 39.3 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 11/26 (42%)

Query: 23 MNALSGNARTAAVVKDNAYGLGCEKI 48
          +    G     A +K +AYG G   I
Sbjct: 27 IKNKIGEKEIVATLKGDAYGHGLINI 52


>gi|327189543|gb|EGE56696.1| putative ornithine decarboxylase protein [Rhizobium etli CNPAF512]
          Length = 377

 Score = 39.3 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 34/118 (28%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+H+      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFHAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|91976729|ref|YP_569388.1| alanine racemase-like [Rhodopseudomonas palustris BisB5]
 gi|91683185|gb|ABE39487.1| alanine racemase-like [Rhodopseudomonas palustris BisB5]
          Length = 360

 Score = 39.3 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L ID+  ++ N   + AL   A  A    +K          +A     AG +      + 
Sbjct: 18 LVIDMDRVERNIARVQALCDAAGVANRPHIKT----HKSPLLAQMQIAAGARGITCQKIG 73

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 74 EAEVMADAGID 84


>gi|254467051|ref|ZP_05080462.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I]
 gi|206687959|gb|EDZ48441.1| ornithine decarboxylase, putative [Rhodobacterales bacterium Y4I]
          Length = 383

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 11/142 (7%)

Query: 36  VKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGI-HPGQEKII 94
           VK N        +   L  AG+  F V S  E   +R  +P A +     +    +    
Sbjct: 51  VKANP--H--PAVLSNLVAAGITAFDVASPAEMEAVRAASPDAVMHYNNPMRSEAEIATG 106

Query: 95  FDTNLIPVISSVPQLT------FYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHN 148
            +  +                   S  ++   + P A       ++ G + +EA++    
Sbjct: 107 IEHGVASWSVDELSELEKLDAVPRSCEVAVRFALPVAGAAYDFGSKFGAAPEEAVELLKQ 166

Query: 149 SFNKKLGQLSLIISHLACADDP 170
              K             C D+ 
Sbjct: 167 VAAKGWTPALCFHPGTQCEDEM 188


>gi|295680721|ref|YP_003609295.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
 gi|295440616|gb|ADG19784.1| alanine racemase domain protein [Burkholderia sp. CCGE1002]
          Length = 376

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 11/138 (7%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +++N  +M A      AR    VK       C+++  A   AG     V++++E 
Sbjct: 13  IDVARMRHNIDNMQARLDKLGARFRPHVKT----TKCKQVVDAQVAAGACGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +  +          +       I V S                   
Sbjct: 69  EQFFASGVRDIVYAVGMVPTKLPQALALRQRGCDLKIVVDSLQVARAVADFGREHDERFE 128

Query: 124 YALQVDTGFNRLGLSLQE 141
             +++D   +R G+   +
Sbjct: 129 VWVEIDVDGHRSGIQPDD 146


>gi|16272064|ref|NP_438263.1| hypothetical protein HI0090 [Haemophilus influenzae Rd KW20]
 gi|260580606|ref|ZP_05848433.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1723862|sp|P44506|Y090_HAEIN RecName: Full=UPF0001 protein HI_0090
 gi|1573041|gb|AAC21768.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092668|gb|EEW76604.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 237

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 66/219 (30%), Gaps = 33/219 (15%)

Query: 15  ALKNNWHSMNALS-----------GNARTAAVVKDNAYGLGCEKIAPAL--YNAGVQDFF 61
            +++N + +                  +  AV K        + I+  L  Y AG   F 
Sbjct: 2   NIQHNLNLIQQKIETACKEENRNQNTVKLLAVSKT-------KPISAILSAYQAGQTAFG 54

Query: 62  VTSVEEGVK----LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
              V+EGV+                +  +   + +++ +           ++        
Sbjct: 55  ENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLVAEHFDWMQTLDRAKIADRLNEQR 114

Query: 118 CGVSHPYALQVDTGF----NRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
                P  + +        ++ G+  +E L    +  N     L  +++  A  D+    
Sbjct: 115 PTNKAPLNVLIQINISDEESKSGIQPEEMLTLAKHIENLPHLCLRGLMAIPAPTDNI--- 171

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQL 212
             + Q   FR ++  ++ ++  L +     L       +
Sbjct: 172 --AEQENAFRKMLELFEQLKQVLPNQQIDTLSMGMTDDM 208


>gi|170751044|ref|YP_001757304.1| ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831]
 gi|170657566|gb|ACB26621.1| Ornithine decarboxylase [Methylobacterium radiotolerans JCM 2831]
          Length = 388

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+ +      + R    VK N       ++   L   G   F   SV E
Sbjct: 26 DLDVVRDNYTAFARSLPDTRVFYAVKANP----APEVLRLLAEMG-SCFDTASVAE 76


>gi|297622385|ref|YP_003703819.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093]
 gi|297163565|gb|ADI13276.1| diaminopimelate decarboxylase [Truepera radiovictrix DSM 17093]
          Length = 385

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 29/108 (26%), Gaps = 10/108 (9%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF--VTSVEEGV 69
           DL A+ +    + A    A     VK N            L +         V SV E  
Sbjct: 24  DLDAIGDRVARLRAALPTAELLYAVKAN-------PCGAVLRHLAAAGLGAEVISVGELA 76

Query: 70  KLRLYT-PQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM 116
           + R    P+ RI +                    + +  Q   + +  
Sbjct: 77  RARRAGFPEGRILLGGPRQDPPLVAAAWGVGWVSLDNPSQWRGWQRFA 124


>gi|289678897|ref|ZP_06499787.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           FF5]
          Length = 337

 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 19  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 74

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +       E+ +          I   S        +   +       
Sbjct: 75  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAIVAFGQAHDERFDV 134

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++ +       S     G     +   A +        ++Q
Sbjct: 135 WIEIDCDGHRSGLTVDDPSLVEVASTLVDGGMQLRGVMTHAGSSYDLDTPAALQ 188


>gi|15966628|ref|NP_386981.1| putative ornithine, DAP, or arginine decarboxylase protein
           [Sinorhizobium meliloti 1021]
 gi|307300337|ref|ZP_07580117.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C]
 gi|307319620|ref|ZP_07599046.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
 gi|15075900|emb|CAC47454.1| Putative ornithine, DAP, or arginine decarboxylase [Sinorhizobium
           meliloti 1021]
 gi|306894742|gb|EFN25502.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti AK83]
 gi|306904503|gb|EFN35087.1| Orn/DAP/Arg decarboxylase 2 [Sinorhizobium meliloti BL225C]
          Length = 379

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 32/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       +I   L   G  +F   SV E 
Sbjct: 22  LVVDLDVVRDNFKAFRHALPDSAIYYAVKANP----APEILRLLAGLG-SNFDCASVAEI 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                                +  +     L   + +V       K+           
Sbjct: 77  EMALDAGATPNRISYGNTIKKERDVARAHALGISLFAVDSHEEVEKIARAAPGARVFC 134


>gi|257456760|ref|ZP_05621944.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii
          ATCC 35580]
 gi|257445766|gb|EEV20825.1| decarboxylase, pyridoxal-dependent family [Treponema vincentii
          ATCC 35580]
          Length = 395

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 4/50 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
          + I+L  +K N+  +      A     VK N      E++   L   G  
Sbjct: 27 VVINLDRIKKNYLELKNFFSTADIYYAVKANP--H--EEVLKLLIELGAN 72


>gi|330891534|gb|EGH24195.1| ornithine decarboxylase [Pseudomonas syringae pv. mori str. 301020]
          Length = 371

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 96/344 (27%), Gaps = 34/344 (9%)

Query: 10  KIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            +D   +  N    +         A+ K N      E++  AL   G+  F V S+ E  
Sbjct: 18  TVDPRWITRNAQQFSGCFPGTVLYAM-KANP----LEQVLEALSQGGINHFDVASLAEVQ 72

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD 129
            +    P A  +++  +                   +      SKL          +   
Sbjct: 73  TVHNTLPDAVQYLMNPVKSRHCLHEAYYRYGVRSFVLDSEEELSKLRDVLPERDSTI--- 129

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPS---SHVNSVQLERFRTLI 186
           + F R   S   A+      F       + ++  +A + D S   S     Q       +
Sbjct: 130 SLFVRYAPSESTAVYDLRGKFGASPVLATQLVHQVASSTDWSLGLSFHVGSQALEDGPWL 189

Query: 187 SHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIR 246
           +     +A +  ++  +   +         ++  G T  +          +   +  L  
Sbjct: 190 AALNDADAIVRDTAEHVRHLDIGGGFPGNYLNSMGNTPDLVGRVCDHIQTSPTLK-DLNL 248

Query: 247 KALAGELVSYG----GQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFI 302
              AG  + YG      + L+R         G   G    LS       P      + + 
Sbjct: 249 ICEAGRGLVYGGMSLFARVLSRREQSVFCGAGIFGGL---LSAQQWLQFP-----ARVWR 300

Query: 303 KGYMV--------PILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
            G            I G     MD   F  + +  I   D+++ 
Sbjct: 301 DGTPYTGAAENTFNIFGPTCDSMDRLAFPYSLASDIRESDWLEF 344


>gi|169608606|ref|XP_001797722.1| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15]
 gi|160701681|gb|EAT84851.2| hypothetical protein SNOG_07385 [Phaeosphaeria nodorum SN15]
          Length = 708

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 69/263 (26%), Gaps = 25/263 (9%)

Query: 7   LRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             + +DL  ++ N   +    L         +K          +A  L +AG +   V  
Sbjct: 355 PSMIVDLDLMEANIKKLMERLLPTGVNIRPHLKT----TKSALLAQRLVDAGAKGGCVAK 410

Query: 65  VEEGVKLRLYTPQARIFVLYGIHP------GQEKIIFDTNLIPVISSVPQLTFYSKLMSC 118
           + E   +        +     I         +      +  I V S V       +L   
Sbjct: 411 LSEAEVMCAKGFDDLLITCEIIGAPKVKRLAELFKKHKSIRIVVDSEVGARAINDELKKS 470

Query: 119 GVSHPYA--LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
           GV    A  + +D G +R G+   E          +      + +             + 
Sbjct: 471 GVDGRIAVLIDLDVGLHRTGIQPGEPALKLAACIAQLDHMALIGVQGY--------EGHL 522

Query: 177 VQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVV 236
             +  F    +        L S++  L    +   +   G +          S P    V
Sbjct: 523 QHVHSFEERKAKCLESMQILTSTANALREAGHQIDVVTTGGTGTAEFC---ISVPGVNEV 579

Query: 237 TAEARIILIRKALAGELVSYGGQ 259
              + I +     A    +Y   
Sbjct: 580 QPGSFIFMDTDYRAAIGTTYSNS 602


>gi|269837390|ref|YP_003319618.1| alanine racemase domain-containing protein [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786653|gb|ACZ38796.1| alanine racemase domain protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 366

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 19/184 (10%)

Query: 9   LKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L +  + L+ N   M A +          +K         +I      AG   F    + 
Sbjct: 12  LVVHESILRRNVEEMAAFAREHGVAMRPHLKT----HKTAEITRMQREAGAIGFTCAKLG 67

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSV------PQLTFYSKLMSCGV 120
           E   L        + + Y I   Q+       +  +  +V            +     G 
Sbjct: 68  EAEALADAGVLDDVLLAYQIVGEQKIRRLLALMDRIKVTVAVDGVEGAAALSAACRDAGK 127

Query: 121 SHPYALQVDTGFNRLGLSLQE-------ALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           +    L+++TG +R G+   E        +          +      ++    AD+ +  
Sbjct: 128 TLDVRLEINTGLDRAGVLPGEPALALAREVMQMPGLRLAGIMTHEGHVAKATNADELAEI 187

Query: 174 VNSV 177
             + 
Sbjct: 188 ATAA 191


>gi|49475973|ref|YP_034014.1| ornithine decarboxylase [Bartonella henselae str. Houston-1]
 gi|49238781|emb|CAF28047.1| Ornithine decarboxylase [Bartonella henselae str. Houston-1]
          Length = 377

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 2  HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
          H +E   L +DL  ++ N+ +       +R    +K N       +I   L + G   F 
Sbjct: 13 HRSEGPCLIVDLDIIRENYLNFEKALPQSRIFYAIKANP----APEILNLLASLG-SSFD 67

Query: 62 VTSVEEGVKLRLYT 75
            SV E        
Sbjct: 68 AASVAEIEMALKAG 81


>gi|209550966|ref|YP_002282883.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536722|gb|ACI56657.1| Orn/DAP/Arg decarboxylase 2 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 377

 Score = 38.9 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  + +N+H+      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVISDNFHAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALEAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|330899492|gb|EGH30911.1| alanine racemase [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330940623|gb|EGH43657.1| alanine racemase [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330976056|gb|EGH76122.1| alanine racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +       E+ +          I   S        +   +       
Sbjct: 72  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVTAARAIVAFGQAHDERFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++ +       S     G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVDDPSLVEVASTLVDGGMQLRGVMTHAGSSYDLDTPAALQ 185


>gi|218462257|ref|ZP_03502348.1| probable ornithine decarboxylase protein [Rhizobium etli Kim 5]
          Length = 377

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFQAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALDAGATAARISFGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|66046627|ref|YP_236468.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257334|gb|AAY38430.1| Alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           B728a]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +       E+ +          I   S            +       
Sbjct: 72  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDERFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++++       S     G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVEDPSLVEVASTLVNGGMQLRGVMTHAGSSYDLDTPAALQ 185


>gi|330972501|gb|EGH72567.1| alanine racemase [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +       E+ +          I   S            +       
Sbjct: 72  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIAVFGQAHDERFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++++       S     G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVEDPSLVEVASTLVNGGMQLRGVMTHAGSSYDLDTPAALQ 185


>gi|240851013|ref|YP_002972413.1| ornithine decarboxylase [Bartonella grahamii as4aup]
 gi|240268136|gb|ACS51724.1| ornithine decarboxylase [Bartonella grahamii as4aup]
          Length = 377

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 2  HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
          H +E   L +DL  +++N+ +       +R    +K N       +I   L + G   F 
Sbjct: 13 HRSEGPCLIVDLDVVRDNYLNFEKALPQSRIFYAIKANP----APEILRLLASLG-SSFD 67

Query: 62 VTSVEEGVKLRLYT 75
            SV E        
Sbjct: 68 AASVAEIEMALKAG 81


>gi|302188653|ref|ZP_07265326.1| alanine racemase, N-terminal [Pseudomonas syringae pv. syringae
           642]
          Length = 378

 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D++ +++N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVSRMQHNIQRMQQRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVTVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +       E+ +          I   S            +       
Sbjct: 72  HCFAEGIDDVFYAVAIAPGKLEQALRLRRKGCRLSILTDSVAAARAIVVFGQAHDERFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++ +             G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVDDPSLIEVARTLVDGGMQLRGVMTHAGSSYDLDTPAALQ 185


>gi|327394996|dbj|BAK12418.1| hypothetical protein PAJ_2338 [Pantoea ananatis AJ13355]
          Length = 423

 Score = 38.5 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 11/96 (11%)

Query: 14  TALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALY-----NAGVQDFFVTSVEEG 68
           +AL+NN   + A                  G   +APA+        G       +  + 
Sbjct: 55  SALENNLRQLAAFCQEKGVMLAA------HGKTSMAPAVLRRAVTQGGAWGISAATPAQV 108

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS 104
             LR +  +        + PG  + I +        
Sbjct: 109 RALRHFGIRNVFLANECVDPGGIRWIGEWQRRHPDH 144


>gi|146340130|ref|YP_001205178.1| putative amino acid processing-like protein [Bradyrhizobium sp.
           ORS278]
 gi|146192936|emb|CAL76943.1| putative amino acid processing enzyme-related protein (aldolase or
           racemase) [Bradyrhizobium sp. ORS278]
          Length = 359

 Score = 38.5 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 40/151 (26%), Gaps = 12/151 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             ID+  ++ N   + A    A  A    +K          +A     AG Q      + 
Sbjct: 18  AVIDMDKVERNIARIQAQCAAAGVANRPHIKT----HKSPVLAKLQIEAGAQGITCQKIG 73

Query: 67  EGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-----SKLMSCGVS 121
           E   +        +     I   +   +        ++                   G +
Sbjct: 74  EAEIMADAGINNILISYNLIGEEKMARLAALQAKADMTVAADNATVIAGLPQAAKQSGRT 133

Query: 122 HPYALQVDTGFNRLGL-SLQEALDFTHNSFN 151
               ++ DTG  R G+ +  EA+        
Sbjct: 134 LSVVVECDTGRKRAGVETPAEAIQLARQIKA 164


>gi|86750314|ref|YP_486810.1| alanine racemase-like [Rhodopseudomonas palustris HaA2]
 gi|86573342|gb|ABD07899.1| Alanine racemase-like [Rhodopseudomonas palustris HaA2]
          Length = 360

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
          L ID+  ++ N   +  L   A  A    +K          +A     AG +      + 
Sbjct: 18 LVIDMDRVERNIARVQGLCDAAGVANRPHIKT----HKSPLLAQMQIKAGARGITCQKLG 73

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 74 EAEVMAEAGID 84


>gi|83816534|ref|YP_446532.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855]
 gi|83757928|gb|ABC46041.1| metal-activated pyridoxal enzyme [Salinibacter ruber DSM 13855]
          Length = 388

 Score = 38.5 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 36/138 (26%), Gaps = 11/138 (7%)

Query: 9   LKIDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           L I+ + L+ N  +M A +   +      VK          IA      G +   V +V 
Sbjct: 11  LLIEQSRLQENLAAMQATADANDVTLRPHVKT----HKSVAIAEQQQQRGAEGLTVATVH 66

Query: 67  EGVKLRLYTPQARIFVLY--GIHPGQ---EKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           E                   G    +         T    V +        +        
Sbjct: 67  EAETFVAAGFDDVRVAYPVVGRPKHERLRALRAAATLSFTVDTMAGADQASAVYAGADNP 126

Query: 122 HPYALQVDTGFNRLGLSL 139
               ++VD G  R G+  
Sbjct: 127 VEVLMEVDVGHGRCGVHW 144


>gi|319643960|ref|ZP_07998535.1| outer membrane protein [Bacteroides sp. 3_1_40A]
 gi|317384484|gb|EFV65451.1| outer membrane protein [Bacteroides sp. 3_1_40A]
          Length = 500

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 337 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 379

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 380 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 439

Query: 123 PYAL 126
               
Sbjct: 440 KPDF 443


>gi|265756011|ref|ZP_06090478.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263234089|gb|EEZ19690.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 496

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 333 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 375

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 376 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 435

Query: 123 PYAL 126
               
Sbjct: 436 KPDF 439


>gi|254882734|ref|ZP_05255444.1| RagB, SusD domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|254835527|gb|EET15836.1| RagB, SusD domain-containing protein [Bacteroides sp. 4_3_47FAA]
          Length = 269

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 106 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 148

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 149 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 208

Query: 123 PYAL 126
               
Sbjct: 209 KPDF 212


>gi|237708718|ref|ZP_04539199.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229457144|gb|EEO62865.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 485

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 322 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 364

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 365 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 424

Query: 123 PYAL 126
               
Sbjct: 425 KPDF 428


>gi|237724166|ref|ZP_04554647.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437354|gb|EEO47431.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 496

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 333 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 375

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 376 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 435

Query: 123 PYAL 126
               
Sbjct: 436 KPDF 439


>gi|212693559|ref|ZP_03301687.1| hypothetical protein BACDOR_03076 [Bacteroides dorei DSM 17855]
 gi|212663812|gb|EEB24386.1| hypothetical protein BACDOR_03076 [Bacteroides dorei DSM 17855]
          Length = 500

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 337 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 379

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 380 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 439

Query: 123 PYAL 126
               
Sbjct: 440 KPDF 443


>gi|150004529|ref|YP_001299273.1| hypothetical protein BVU_1979 [Bacteroides vulgatus ATCC 8482]
 gi|294778288|ref|ZP_06743714.1| putative lipoprotein [Bacteroides vulgatus PC510]
 gi|149932953|gb|ABR39651.1| putative outer membrane protein, probably involved in nutrient
           binding [Bacteroides vulgatus ATCC 8482]
 gi|294447916|gb|EFG16490.1| putative lipoprotein [Bacteroides vulgatus PC510]
          Length = 496

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 28/124 (22%)

Query: 14  TALKNNWHSMNALSGNARTAAV----------VKDNAYGLGCEKIAPALYNAGVQDFFVT 63
           +A+  N  S+  L  +A    V          +K             ALY +G       
Sbjct: 333 SAVAYNLKSVKKLLNDANDMPVIFSRVSELYLIKA-----------EALYRSG------A 375

Query: 64  SVEEGVK-LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH 122
           S+ E    +R    +A   ++   +  + +       +  +S      +++ +   G + 
Sbjct: 376 SISEAYAPIRKLRERAGAEIILPANNEELETAIFNEWMLELSFENWHEWFAMIRFAGYTE 435

Query: 123 PYAL 126
               
Sbjct: 436 KPDF 439


>gi|187920497|ref|YP_001889529.1| alanine racemase domain-containing protein [Burkholderia
           phytofirmans PsJN]
 gi|187718935|gb|ACD20158.1| alanine racemase domain protein [Burkholderia phytofirmans PsJN]
          Length = 355

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/131 (10%), Positives = 38/131 (29%), Gaps = 5/131 (3%)

Query: 48  IAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPV 102
           +  A   AG +   V++++E            ++ +  +          +       + V
Sbjct: 24  VVRAQIAAGARGITVSTLKEAEAFFAAGVDDILYAVSMVPSKLPRALALRRQGCNLKLVV 83

Query: 103 ISSVPQLTFYSKLMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIIS 162
            +        +     G +    ++VDT  +R G++ ++             G     + 
Sbjct: 84  DNPTAASAIAAFGDQHGETFEVWIEVDTDGHRSGITPEQDTLLEVGRILHDNGVEVGGVM 143

Query: 163 HLACADDPSSH 173
             A +      
Sbjct: 144 THAGSSYELDT 154


>gi|271500712|ref|YP_003333737.1| alanine racemase domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270344267|gb|ACZ77032.1| alanine racemase domain protein [Dickeya dadantii Ech586]
          Length = 423

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 23/96 (23%), Gaps = 11/96 (11%)

Query: 14  TALKNNWHSMNALSGNARTAAVVKDNAYGLG-----CEKIAPALYNAGVQDFFVTSVEEG 68
           +AL+NN   + A                  G        +  A+   G       +  + 
Sbjct: 55  SALENNLRQLAAFCRERGVMLAA------HGKTSMSATVLRRAITEGGAWGISAATPAQV 108

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVIS 104
             LR +  +        + P   + I          
Sbjct: 109 RALRHFGIRNVFLANQLVDPAGIRWIAQWQQQHPDH 144


>gi|302528756|ref|ZP_07281098.1| predicted protein [Streptomyces sp. AA4]
 gi|302437651|gb|EFL09467.1| predicted protein [Streptomyces sp. AA4]
          Length = 343

 Score = 38.5 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 6/83 (7%)

Query: 16 LKNNWHS--MNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRL 73
          ++ N           +    A VK    G    ++A     AG     V +  E  +   
Sbjct: 12 VERNIERYHARFKCSSVALRAHVK----GHRTVELARFQEAAGASGIAVHTTAEARRYLA 67

Query: 74 YTPQARIFVLYGIHPGQEKIIFD 96
                +     I P +     D
Sbjct: 68 SGITDIVLAWPLISPERWSFFAD 90


>gi|332715985|ref|YP_004443451.1| ornithine decarboxylase [Agrobacterium sp. H13-3]
 gi|325062670|gb|ADY66360.1| ornithine decarboxylase [Agrobacterium sp. H13-3]
          Length = 377

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+++      N+     VK N       +I   L + G  +F   SV E
Sbjct: 20 LVVDLDVVRDNFNAFRHSLPNSAIYYAVKANP----APEILKLLASLG-SNFDCASVAE 73


>gi|284046325|ref|YP_003396665.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
 gi|283950546|gb|ADB53290.1| alanine racemase domain protein [Conexibacter woesei DSM 14684]
          Length = 386

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 11/82 (13%)

Query: 1  MHSNEFLRLK-----IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALY 53
          M       L+     +DL AL+ N     A +          +K          +A    
Sbjct: 1  MIGQPVAELETPAVVVDLGALERNVARAGAYAREHGLALWPHLKT----HKTVAVAERQR 56

Query: 54 NAGVQDFFVTSVEEGVKLRLYT 75
           AGV  F      E  +   + 
Sbjct: 57 AAGVAGFTAAKTTEAERFAAHG 78


>gi|159185643|ref|NP_357406.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58]
 gi|159140777|gb|AAK90191.2| ornithine decarboxylase [Agrobacterium tumefaciens str. C58]
          Length = 377

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+++      N+     VK N       +I   L + G  +F   SV E
Sbjct: 20 LVVDLDVVRDNFNAFRHSLPNSAIYYAVKANP----APEILKLLASLG-SNFDCASVAE 73


>gi|255078594|ref|XP_002502877.1| predicted protein [Micromonas sp. RCC299]
 gi|226518143|gb|ACO64135.1| predicted protein [Micromonas sp. RCC299]
          Length = 486

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA-AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L ++   +++N  ++    G        +K        + +   L   GV++F V + +E
Sbjct: 38 LIVNEAHVRHNVKTIIGKCGRPDRWRPHLKT----TKMKWVWRILIEEGVRNFKVATTKE 93

Query: 68 GVKL 71
             +
Sbjct: 94 AEAM 97


>gi|170694158|ref|ZP_02885313.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia graminis C4D1M]
 gi|170140898|gb|EDT09071.1| pyridoxal-dependent decarboxylase, exosortase system type 1
           associated [Burkholderia graminis C4D1M]
          Length = 402

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 94/356 (26%), Gaps = 42/356 (11%)

Query: 8   RLKIDLTALKNNWHSMNAL-SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
           R  ID          + +L          +K N        +   L  A V  F V S +
Sbjct: 36  RAAIDTR-----IRELRSLLPPGVHLHYSIKANP----MPAVVHYL-AARVDGFDVASAQ 85

Query: 67  E-GVKLRL-YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT-----FYSKLMSCG 119
           E  V L     P    F   G      +    + +   + S  QL       +   +  G
Sbjct: 86  EMAVALNAGAAPADIGFAGPGKSYDDLRRAISSGVNVHVESETQLRLVTALGWELGVQPG 145

Query: 120 VSHPYALQVDTGFNRLGLSLQ------EALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           V+       + G + + +         +           +  Q++L   H+         
Sbjct: 146 VAIRINPDFEVGRSGMRMGGGAAPFGVDVDQVPALLRELQARQVALAGFHIFWGSQCLDA 205

Query: 174 VNSVQLERFR----TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKS 229
              +Q +R        ++          +  G    P  +F    P           +  
Sbjct: 206 ATVIQAQRQSADLVARLARGLSEPPRFVNLGGGFGIP--YFPGETPLNVQAVCEAMHDWL 263

Query: 230 HPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSE 289
             +   V+    I+ + + L GE       + + R        +    G    L+     
Sbjct: 264 PRLCERVSGMTPILELGRYLVGE-AGIYVCRVIDRKVSRGRTFVITDGGLHHHLA-ASGN 321

Query: 290 HSPSVFLGGKGFIKG-------YMVPILGKIT--MDMTMFDITDSLSIEVGDYIQI 336
               +       I             ++G +   +D    DI +     +GD + +
Sbjct: 322 FGQVLRRNFPVVIGNRPDGVPQQRCHVVGCLCTPLDRLADDI-ELPEAHIGDLVVV 376


>gi|54295359|ref|YP_127774.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens]
 gi|53755191|emb|CAH16684.1| hypothetical protein lpl2444 [Legionella pneumophila str. Lens]
          Length = 376

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 54/195 (27%), Gaps = 27/195 (13%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L ID   LK N   M          +  + +T            C +IA      G    
Sbjct: 18  LVIDYEKLKYNLKMMQQHGFKWGIGIRPHCKT----------HKCTQIARLQLEYGAIGI 67

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSC 118
               + E   L        +     +   +   +F++          V        L   
Sbjct: 68  SAAKLSEAEVLVSKQITNVLITSPIVSEAKYSRLFNSLKSAPDLMLVVDGKDNIRMLNEL 127

Query: 119 GVSHPYALQ----VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           G S    +     +D+G  R G++ + AL++ H        +L  I      A       
Sbjct: 128 GKSLNQPVYVLLDIDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQC---YAGHLQHIQ 184

Query: 175 NSVQLERFRTLISHY 189
           N  + + F   I   
Sbjct: 185 NYEERKAFSLRIMEM 199


>gi|110634377|ref|YP_674585.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium sp. BNC1]
 gi|110285361|gb|ABG63420.1| Orn/DAP/Arg decarboxylase 2 [Chelativorans sp. BNC1]
          Length = 406

 Score = 38.1 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 15/66 (22%)

Query: 35 VVKDNAYGL---------------GCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQAR 79
          V+K +A G                G   +   L  AGV  F V S  E   +R   P A 
Sbjct: 27 VLKADARGFMGLFPGKTAYAVKTNGEPLVLKTLAEAGVTAFDVASPAEFAAVRAVAPSAE 86

Query: 80 IFVLYG 85
          +  ++ 
Sbjct: 87 MLYMHP 92


>gi|311103295|ref|YP_003976148.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans A8]
 gi|310757984|gb|ADP13433.1| metal-activated pyridoxal enzyme [Achromobacter xylosoxidans A8]
          Length = 379

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 22/68 (32%), Gaps = 6/68 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
          DLTA + N  +M A +     A     K       C +IA      G +      V E +
Sbjct: 32 DLTAFEANLRAMQAWADRHEVALRPHAKA----HKCPQIALRQLALGARGICCQKVSEAL 87

Query: 70 KLRLYTPQ 77
                 +
Sbjct: 88 PFVAAGIR 95


>gi|170736332|ref|YP_001777592.1| alanine racemase domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169818520|gb|ACA93102.1| alanine racemase domain protein [Burkholderia cenocepacia MC0-3]
          Length = 376

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 11/147 (7%)

Query: 1   MHSNEFLRLKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
           +H+       ID+  ++ N   M     +   R    VK       C+++  A   AG Q
Sbjct: 3   LHTLNTPAALIDVAHMQRNIARMQTHLDALGVRFRPHVKT----TKCQQVVDAQIAAGAQ 58

Query: 59  DFFVTSVEEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYS 113
              V++++E  +      +  ++ +  +          +       I   S        +
Sbjct: 59  GITVSTLKEAEQFFADGIRDIVYAVGMVPAKLGQALALRRQGCDLKIVADSLPAAHAIAA 118

Query: 114 KLMSCGVSHPYALQVDTGFNRLGLSLQ 140
                G      ++VD   +R G+   
Sbjct: 119 FGREHGERFDVWIEVDVDGHRSGIPPD 145


>gi|256379655|ref|YP_003103315.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827]
 gi|255923958|gb|ACU39469.1| Orn/DAP/Arg decarboxylase 2 [Actinosynnema mirum DSM 43827]
          Length = 397

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L IDL  +   + ++ A          VK N       ++   L   G   F V S  E
Sbjct: 39 LVIDLPTVVERFRALRAALPGVGIFYAVKANP----TREVVEVLAAEGC-CFDVASPNE 92


>gi|319782827|ref|YP_004142303.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
 gi|317168715|gb|ADV12253.1| Orn/DAP/Arg decarboxylase 2 [Mesorhizobium ciceri biovar
          biserrulae WSM1271]
          Length = 406

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 31 RTAAVVKDNAYGLGCEKIA-PALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
          +TA  VK N      E+I    L  AGV+ F V S  E   +R  +P A +  ++ 
Sbjct: 42 KTAYAVKTNG-----EQIVLKTLVEAGVKAFDVASPGEFAAVRAVSPDAEMLYMHP 92


>gi|150021213|ref|YP_001306567.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429]
 gi|149793734|gb|ABR31182.1| Orn/DAP/Arg decarboxylase 2 [Thermosipho melanesiensis BI429]
          Length = 386

 Score = 38.1 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +K N+  +     N+R    VK N+      +I   L + G   F V S  E 
Sbjct: 22  LVMDLNIVKANYEKLIDNVRNSRVYYAVKANS--H--IEILKLLRDLG-SYFDVASRPEI 76

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KL     +             + I F  N    + +V       K+          +++
Sbjct: 77  EKLLSIGVEPERMSFGNTIKKTKDISFAYNNGIRMFAVDSEMEIEKIADNAPGSDIYVRI 136

Query: 129 DTG 131
            T 
Sbjct: 137 STN 139


>gi|163868811|ref|YP_001610035.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476]
 gi|161018482|emb|CAK02040.1| lysine/ornithine decarboxylase [Bartonella tribocorum CIP 105476]
          Length = 377

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 2  HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDN 39
          H +E   L +DL  +++N+ +       +R    +K N
Sbjct: 13 HRSEGPCLIVDLDVVRDNYLNFKKALPQSRIFYAIKAN 50


>gi|116253893|ref|YP_769731.1| lysine/ornithine decarboxylase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258541|emb|CAK09645.1| putative lysine/ornithine decarboxylase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 377

 Score = 38.1 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ +      ++     VK N       ++   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFDAFRHAMPDSAIYYAVKANP----APEVLKLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
                    A           +  +     L   + +V       K+           
Sbjct: 75  EMALEAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEKISRAAPGARVFC 132


>gi|121603426|ref|YP_980755.1| putative threonine aldolase [Polaromonas naphthalenivorans CJ2]
 gi|120592395|gb|ABM35834.1| putative threonine aldolase [Polaromonas naphthalenivorans CJ2]
          Length = 396

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 28/119 (23%), Gaps = 18/119 (15%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALY 53
           H  +   L ID+ ALK N   M   +         +A+                +A    
Sbjct: 17  HDIDTPALVIDMDALKRNLVRMADFAKKHHVRWRPHAKL----------HKSTVLAKMQI 66

Query: 54  NAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY 112
            AG     V    E   +              I P +   +             Q+   
Sbjct: 67  KAGAAGVCVQKTAEAEVMVAGGIYNVYISNQVIAPAKLARVAALTQAVASHRGGQIAIA 125


>gi|13471573|ref|NP_103139.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
 gi|14022315|dbj|BAB48925.1| ornithine decarboxylase [Mesorhizobium loti MAFF303099]
          Length = 406

 Score = 38.1 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 31 RTAAVVKDNAYGLGCEKIA-PALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
          +TA  VK N      E+I    L  AGV  F V S  E   +R  +P A +  ++ 
Sbjct: 42 KTAYAVKTNG-----EQIVLKTLVEAGVTAFDVASPGEFAAVRAVSPDAEMLYMHP 92


>gi|13124043|sp|O50657|DCLO_SELRU RecName: Full=Lysine/ornithine decarboxylase; Short=LDC
 gi|2897824|dbj|BAA24923.1| lysine/ornithine decarboxylase [Selenomonas ruminantium]
 gi|28804806|dbj|BAC57940.1| lysine decarboxylase [Selenomonas ruminantium]
          Length = 393

 Score = 38.1 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/342 (11%), Positives = 91/342 (26%), Gaps = 42/342 (12%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
            L  ++ N+  M      A     +K N       +I   L   G   F V S  E   L
Sbjct: 26  SLDKVEENYQFMRRHLPRAGVFYAMKANP----TPEILSLLAGLG-SHFDVASAGEMEIL 80

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
                     +          +    +      +    +   K+          +++   
Sbjct: 81  HELGVDGSQMIYANPVKDARGLKAAADYNVRRFTFDDPSEIDKMAKAVPGADVLVRIAVR 140

Query: 132 FN--------RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR 183
            N        + G  ++EALD    + +  L  + +     + +   +++  ++ + R  
Sbjct: 141 NNKALVDLNTKFGAPVEEALDLLKAAQDAGLHAMGICFHVGSQSLSTAAYEEALLVARRL 200

Query: 184 TLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVT-----A 238
              +   G+  +     G    P+           +     +I++  P   V T      
Sbjct: 201 FDEAEEMGMHLTDLDIGGGFPVPDAKGLNVDLAAMMEAINKQIDRLFPDTAVWTEPGRYM 260

Query: 239 EARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
               + +  ++ G          +  + +    +    D +   L      +      GG
Sbjct: 261 CGTAVNLVTSVIGTKTRGEQPWYILDEGIYGCFSGIMYDHWTYPLHCFGKGNKKPSTFGG 320

Query: 299 K------GFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYI 334
                     +               M     +  +++GD +
Sbjct: 321 PSCDGIDVLYRD-------------FM-----APELKIGDKV 344


>gi|293602765|ref|ZP_06685205.1| threonine aldolase [Achromobacter piechaudii ATCC 43553]
 gi|292818781|gb|EFF77822.1| threonine aldolase [Achromobacter piechaudii ATCC 43553]
          Length = 379

 Score = 38.1 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 6/73 (8%)

Query: 7  LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
            L +DLT  + N  +M A +     A     K       C +IA      G +      
Sbjct: 27 PSLVLDLTPFEANLRAMQAWADRHEVALRPHAKA----HKCPEIARRQLALGARGICCQK 82

Query: 65 VEEGVKLRLYTPQ 77
          V E +        
Sbjct: 83 VSEALPFVAAGIH 95


>gi|327539588|gb|EGF26197.1| alanine racemase domain protein [Rhodopirellula baltica WH47]
          Length = 368

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 54/189 (28%), Gaps = 15/189 (7%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
             ++ N   M  ++G A +    VK          I      +G+  F   ++ E     
Sbjct: 17  DRVQANLDRMIEMAGGAYKLRPHVKT----HKMPAIVELSIASGITRFKSATIAEAEMTA 72

Query: 73  LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-------SKLMSCGVSHPYA 125
                  +  +  + P   + +      P  +    +          +     G+     
Sbjct: 73  EAGAVDVLLAVQPVGPNIGRFVKLIQRYPGCAFSCLVDDLSVLASLEAAFELAGLRGSVW 132

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + +D G +R G++  ++      S         + ++ +   D      +S +L R    
Sbjct: 133 IDIDVGMHRTGIAPNDSATELVRSIQTSDH---VRLAGIHVYDGHLHDTDSEKLRRQFDE 189

Query: 186 ISHYKGIEA 194
                 I  
Sbjct: 190 AVKPFWIWF 198


>gi|91778101|ref|YP_553309.1| metal-activated pyridoxal protein [Burkholderia xenovorans LB400]
 gi|91690761|gb|ABE33959.1| Metal-activated pyridoxal enzyme [Burkholderia xenovorans LB400]
          Length = 379

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 53/173 (30%), Gaps = 17/173 (9%)

Query: 11  IDLTALKNNWHSMNALSGNARTAAV-----VKDNAYGLGCEKIAPALYNAGVQDFFVTSV 65
           ID+  ++ N   M    G+  T  V     VK       C  +  A   AG +   V+++
Sbjct: 13  IDIARMQKNIARMQ---GHMNTLGVAFRPHVKT----TKCIDVVRAQIAAGARGITVSTL 65

Query: 66  EEGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGV 120
           +E         +  ++ +             +       + V +        +     G 
Sbjct: 66  KEAEAFFAAGVEDILYAVSMAPSKLPRALALRRQGCDLKLVVDNPNAAAAIAAFSDQHGQ 125

Query: 121 SHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           +    ++VDT  +R G++ ++           + G     +   A +      
Sbjct: 126 TFEVCIEVDTDGHRSGITPEQDTLLEVGRILHENGVKVGGVMTHAGSSYELDT 178


>gi|78063401|ref|YP_373309.1| alanine racemase-like [Burkholderia sp. 383]
 gi|77971286|gb|ABB12665.1| Alanine racemase-like protein [Burkholderia sp. 383]
          Length = 359

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 13/165 (7%)

Query: 17  KNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
           ++N   M A   +   R    VK       C ++  A   AG Q   V++++E  +   +
Sbjct: 2   RHNIGRMQAHLDALGVRFRPHVKT----TKCTQVVDAQLAAGAQGITVSTLKEAEQFFAH 57

Query: 75  TPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSHPYALQV 128
             +  ++ + G+ P +                   S            + G      ++V
Sbjct: 58  GIRDIVYAV-GMVPAKLGQALALRRQGCDLKLVADSLPAAHAIAEFGRAHGERFDVWIEV 116

Query: 129 DTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSH 173
           D   +R G+     L           G +   +   A +      
Sbjct: 117 DVDGHRSGIPPDADLLIDVGRALFDGGMMLGGVLAHAGSSYEYDT 161


>gi|319404654|emb|CBI78256.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC
           BAA-1498]
 gi|319404673|emb|CBI78275.1| lysine/ornithine decarboxylase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 377

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 42/164 (25%), Gaps = 5/164 (3%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H +E   L +DL  +  N+ +       +R    +K N       +I   L + G   F 
Sbjct: 13  HRSEGPCLVVDLDVVHENYLNFEKALPQSRIFYAIKANP----APEILRLLVSLG-SFFD 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             SV E          A           +  I     L   + ++       K+      
Sbjct: 68  AASVAEIEMALAAGATANRISFGNTIKKERDIARAHALGISLYAIDCFEEVEKVARAAPG 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA 165
                +V T        L +      +     L     +     
Sbjct: 128 ARVFCRVLTDGEGAEWPLSQKFGCVPSMAVDVLRYAHHLGLQAH 171


>gi|149909881|ref|ZP_01898531.1| metal-activated pyridoxal enzyme [Moritella sp. PE36]
 gi|149807046|gb|EDM67004.1| metal-activated pyridoxal enzyme [Moritella sp. PE36]
          Length = 363

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 49/184 (26%), Gaps = 24/184 (13%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L ID   L +N  +M   +         +A+T            C +I     +AG    
Sbjct: 14  LVIDKRKLMHNIETMQKFAAAKSKHVRPHAKT----------HKCVEICQLQLDAGSIGI 63

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTN------LIPVISSVPQLTFYSK 114
            +T   E  +L     +  +     +   +   +          +I V S          
Sbjct: 64  SITKPSEAYELAKAHIRHLLITSPIVTKHKLATLAKIIKLAPETMIVVDSETNLTQLNQL 123

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                      + +D G  R G S + A D   +        L  I  +         + 
Sbjct: 124 GSELNQRINLVVDIDAGIGRTGASFETAFDLALSVHRNANTTLKGIQCYAGHFQHILDNE 183

Query: 175 NSVQ 178
              Q
Sbjct: 184 ERKQ 187


>gi|86609204|ref|YP_477966.1| hypothetical protein CYB_1746 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557746|gb|ABD02703.1| conserved hypothetical protein TIGR00044 [Synechococcus sp.
          JA-2-3B'a(2-13)]
          Length = 227

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 6/51 (11%)

Query: 20 WHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
            ++ A    +    AV K    G   + I  A Y AG++ F  + V+E  
Sbjct: 12 IQAIRAQIPDHVEIMAVSK----GYSADHI-RAAYRAGIRHFGESRVQEAA 57


>gi|296532599|ref|ZP_06895304.1| alanine racemase domain protein [Roseomonas cervicalis ATCC
          49957]
 gi|296267090|gb|EFH13010.1| alanine racemase domain protein [Roseomonas cervicalis ATCC
          49957]
          Length = 352

 Score = 37.7 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 20/73 (27%), Gaps = 6/73 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          IDL  ++ N   M A   +   A    +K          +A      G +      + E 
Sbjct: 13 IDLDVVEANLARMQAYCDSHGIALRPHIKT----HKLPALARRQVELGARGITCQKLGEA 68

Query: 69 VKLRLYTPQARIF 81
            +        + 
Sbjct: 69 EVMVEAGIDDILM 81


>gi|86605564|ref|YP_474327.1| hypothetical protein CYA_0860 [Synechococcus sp. JA-3-3Ab]
 gi|86554106|gb|ABC99064.1| conserved hypothetical protein TIGR00044 [Synechococcus sp.
          JA-3-3Ab]
          Length = 224

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 6/52 (11%)

Query: 20 WHSMNALSG-NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
            ++ A    +    AV K   Y         A Y AG++ F  + V+E   
Sbjct: 9  IQAIRAQIPEHVEIMAVSK--GY---SVNHIRAAYRAGIRHFGESRVQEAAA 55


>gi|320535387|ref|ZP_08035501.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain
          protein [Treponema phagedenis F0421]
 gi|320147789|gb|EFW39291.1| pyridoxal-dependent decarboxylase, pyridoxal binding domain
          protein [Treponema phagedenis F0421]
          Length = 389

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQ 58
          + I+L  +K N+  +  L  +A     +K N      E+I   L   G  
Sbjct: 27 VIINLEKIKKNYLELKQLFPDADIYYAMKANP--H--EEILKLLIGLGAN 72


>gi|307297673|ref|ZP_07577479.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916933|gb|EFN47315.1| Orn/DAP/Arg decarboxylase 2 [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 387

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +D+  ++NN+  + +   N +    VK N+      +I   L + G  +F V S  E 
Sbjct: 19  LIMDMDYVRNNYFDIVSHVRNVQVFYAVKANS--H--PRIIETLRDLG-SNFDVASRGEI 73

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
            KL                   E I +  ++     +V       K+ +         ++
Sbjct: 74  EKLLALGISPERMSFGNTIKKVEDIAYAYSVGIDYYAVDSEMEVEKIAAHAPGSKVYGRI 133

Query: 129 DTGFNRLGLS 138
            T        
Sbjct: 134 ATSGGDCDWP 143


>gi|27379075|ref|NP_770604.1| hypothetical protein bll3964 [Bradyrhizobium japonicum USDA 110]
 gi|27352225|dbj|BAC49229.1| bll3964 [Bradyrhizobium japonicum USDA 110]
          Length = 359

 Score = 37.7 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 6/71 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
            ID+  ++ N   +      A  A    +K          IA     AG +      + 
Sbjct: 18 AVIDMDKVERNIARIQKACDEAGVANRPHIKT----HKNPTIAKMQIAAGAKGITCQKLG 73

Query: 67 EGVKLRLYTPQ 77
          E   +      
Sbjct: 74 EAEIMANAGID 84


>gi|170288742|ref|YP_001738980.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2]
 gi|170176245|gb|ACB09297.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga sp. RQ2]
          Length = 388

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 80/286 (27%), Gaps = 18/286 (6%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL+ ++  +  M A    A     VK N+      +I   L   G  +F V S  E  KL
Sbjct: 21  DLSVVEKKYLEMKAALKKADIYYAVKANS--H--PRIISLLARLG-SNFDVASKGEIEKL 75

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
                  +          +E I F       + +V       K+          ++V+T 
Sbjct: 76  LALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVFVRVETD 135

Query: 132 FNRLGL--------SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL--ER 181
                         + + AL     +   KL    L     +   +P S   ++++    
Sbjct: 136 GADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAIEIAGRV 195

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F+  +     +          +        +   G       + I+++      +   A 
Sbjct: 196 FKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGK---AIEEAIDENLWFVHNLRVIAE 252

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
                   AG LV+    K             G   G   T+   +
Sbjct: 253 PGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFE 298


>gi|319407636|emb|CBI81285.1| lysine/ornithine decarboxylase [Bartonella sp. 1-1C]
          Length = 377

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 42/164 (25%), Gaps = 5/164 (3%)

Query: 2   HSNEFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
           H +E   L +DL  +  N+ +       +R    +K N       +I   L + G   F 
Sbjct: 13  HRSEGPCLVVDLDVVHENYLNFEKALPQSRIFYAIKANP----APEILRLLVSLG-SSFD 67

Query: 62  VTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
             SV E          A           +  I     L   + +V       K+      
Sbjct: 68  AASVAEIEMALAAGATANRISFGNTIKKERDIARAHALGISLYAVDCFEEVEKVARAAPG 127

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLA 165
                +V T        L +      +     L     +     
Sbjct: 128 ARVFCRVLTDGEGAEWPLSQKFGCVPSMAVDVLRYAHHLGLQAH 171


>gi|110635049|ref|YP_675257.1| ornithine decarboxylase [Mesorhizobium sp. BNC1]
 gi|110286033|gb|ABG64092.1| ornithine decarboxylase [Chelativorans sp. BNC1]
          Length = 377

 Score = 37.7 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       +I   L + G   F   SV E
Sbjct: 20 LVVDLDVVRDNYLAFERALPDSRIYYAVKANP----APQILRLLTSLG-SSFDTASVAE 73


>gi|237748340|ref|ZP_04578820.1| amino acid racemase [Oxalobacter formigenes OXCC13]
 gi|229379702|gb|EEO29793.1| amino acid racemase [Oxalobacter formigenes OXCC13]
          Length = 357

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 59/211 (27%), Gaps = 19/211 (9%)

Query: 6   FLRLKIDLTALKNNWHSMNALSGN--------ARTAAVVKDNAYGLGCEKIAPALYNAGV 57
              + +D   LK+N+  +N L           ++          G         L   GV
Sbjct: 1   MAYITLDRNKLKHNYDYLNRLFDGNGISWSVVSKLLC-------GH--PLFLEELRKLGV 51

Query: 58  QDFFVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM- 116
                + +     ++   P      +          I     I   +    L   S    
Sbjct: 52  TRICDSRMANIKAIKKIAPDIETMCIRPPALRAIPDIVRYADISFNTEYATLEKLSAEAS 111

Query: 117 SCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
             G  H   + ++ G  R G+   + L     +       +  + ++L+C        + 
Sbjct: 112 RQGKVHQVIIMIELGELREGVLRDDVLPIYEKTLTLPHIDIVGVGTNLSCLSGILPDYDK 171

Query: 177 V-QLERFRTLISHYKGIEASLASSSGILLGP 206
           + QL  +R L+    G      S    +  P
Sbjct: 172 LNQLCLYRDLLHAKFGKAIPYVSGGTSVTIP 202


>gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
 gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
          Length = 215

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 8/199 (4%), Positives = 28/199 (14%), Gaps = 9/199 (4%)

Query: 79  RIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVD----TGFNR 134
                +          +                +         H +              
Sbjct: 3   TCIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIF 62

Query: 135 LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKG--- 191
             +     +    +        +        C          +    +     H+     
Sbjct: 63  TCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIF 122

Query: 192 --IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILIRKAL 249
             I       + +         +       +G    ++    + T +     I       
Sbjct: 123 TCIHWWWWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLHWC 182

Query: 250 AGELVSYGGQKKLTRDSLI 268
            G          +      
Sbjct: 183 WGIFTCVHWCWGIFTCIHW 201


>gi|330960246|gb|EGH60506.1| hypothetical protein PMA4326_16961 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 367

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 48/174 (27%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D+  ++ N   M         R    VK          +  A   AG     V++++E  
Sbjct: 5   DVPRMQRNIRRMQQRMNELGVRLRPHVKT----SKSLPVIQAQIAAGATGVTVSTLKEAE 60

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIF-----DTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                  +   + +       ++            I   S V      +           
Sbjct: 61  HCFAEGIEDVFYAVAIAPGKLDQAFRLRRNGCRLSILTDSVVAAQAIVAFGQQHDERFEV 120

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL+++++            G     +   A +        ++Q
Sbjct: 121 WIEIDCDGHRSGLAVEDSALIDVAKTLVDGGMQLRGVMTHAGSSYDLDTPEALQ 174


>gi|54309885|ref|YP_130905.1| hypothetical protein PBPRA2731 [Photobacterium profundum SS9]
 gi|46914324|emb|CAG21103.1| hypothetical protein PBPRA2731 [Photobacterium profundum SS9]
          Length = 355

 Score = 37.7 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 11/82 (13%)

Query: 5  EFLRLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGL-----GCEKIAPALYNAGVQD 59
          ++  L I+L  ++NN   +  L  N     V      G+     G E I  A+   G+Q 
Sbjct: 2  QYPSLSINLRIIENNTRELVQLCCNKGIIPV------GITKLVEGSEPIVRAMIFGGIQT 55

Query: 60 FFVTSVEEGVKLRLYTPQARIF 81
             T ++  +KL+    +  + 
Sbjct: 56 IGDTQIQNLMKLKDLPIRKMLL 77


>gi|269129052|ref|YP_003302422.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183]
 gi|268314010|gb|ACZ00385.1| Orn/DAP/Arg decarboxylase 2 [Thermomonospora curvata DSM 43183]
          Length = 373

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 77/320 (24%), Gaps = 33/320 (10%)

Query: 12  DLTALKNNWHSMNA-LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
           DL AL+ +  ++   L+G        K N       +I        V    V S  E   
Sbjct: 19  DLGALREHVAAIRKALTGGPELFYAAKANP----DAEILKT-VAPYVDGIEVASGGELKH 73

Query: 71  LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDT 130
           +R   P+AR  + +G     ++ +           V      S+L   G      L+V+ 
Sbjct: 74  VRAVLPKAR--LAFGGPGKTDEELALAVREAERVHVESPHELSRLARIGRDVDVLLRVNL 131

Query: 131 GFNR--------LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERF 182
              R            +        +        + L   H   A    +     Q E  
Sbjct: 132 AGERKGVALAMSGPFGMDPEAIEACHEILAGAPWVRLRGIHAHLASGLEAEALVRQSEEI 191

Query: 183 RTLISHYKGIEASLASS--------SGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
                 +        +         +     P+  F  T  G  +               
Sbjct: 192 LQWARPWLEKTGCTQNPEFNLGGGMAVDYTDPHRRFDWTTYGRQIAALAQPGEI------ 245

Query: 235 VVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSV 294
                          AG  V+     K       AV   G            +   +   
Sbjct: 246 ---LRIEPGRAVTVYAGWYVTQVLDVKKAHGQWYAVLRGGTHHIRTPVTKNHNQPFTVLP 302

Query: 295 FLGGKGFIKGYMVPILGKIT 314
                  + G  V ++G++ 
Sbjct: 303 RGEQGPAVNGAEVTLVGQLC 322


>gi|153011560|ref|YP_001372774.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188]
 gi|151563448|gb|ABS16945.1| Orn/DAP/Arg decarboxylase 2 [Ochrobactrum anthropi ATCC 49188]
          Length = 377

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          L +D   +++N+ S       +R    VK N       +I   L + G   F   SV E 
Sbjct: 20 LVVDTDVVRDNYQSFEKALPYSRIFYAVKANP----APEILRLLASLG-SCFDTASVAEI 74

Query: 69 VKLRLYT 75
                 
Sbjct: 75 EMALEAG 81


>gi|134292751|ref|YP_001116487.1| alanine racemase domain-containing protein [Burkholderia
           vietnamiensis G4]
 gi|134135908|gb|ABO57022.1| alanine racemase domain protein [Burkholderia vietnamiensis G4]
          Length = 376

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 53/174 (30%), Gaps = 13/174 (7%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   ++A   +        VK       C+++  A   AG +   V++++E 
Sbjct: 13  IDVDRMHANIARLHAHLDAFGVAFRPHVKT----TKCQQVVDAQIAAGARGITVSTLKEA 68

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPV------ISSVPQLTFYSKLMSCGVSH 122
            +      +  ++ + G+ P +                   S        +     G   
Sbjct: 69  EQFFASGVRDIVYAV-GMIPARLPQALALRRRGCDLKIVADSLHTAQAIAAFGREHGERF 127

Query: 123 PYALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNS 176
              +++D   +R G+   + L           G     +   A +       ++
Sbjct: 128 EVWIEIDVDGHRSGIRPDDDLLIDVGRTLAAGGMTLGGVLAHAGSSYEYDTHDA 181


>gi|15644616|ref|NP_229669.1| ornithine decarboxylase [Thermotoga maritima MSB8]
 gi|148270058|ref|YP_001244518.1| Orn/DAP/Arg decarboxylase 2 [Thermotoga petrophila RKU-1]
 gi|281412061|ref|YP_003346140.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10]
 gi|4982459|gb|AAD36935.1|AE001824_4 ornithine decarboxylase [Thermotoga maritima MSB8]
 gi|147735602|gb|ABQ46942.1| ornithine decarboxylase [Thermotoga petrophila RKU-1]
 gi|281373164|gb|ADA66726.1| Ornithine decarboxylase [Thermotoga naphthophila RKU-10]
          Length = 388

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 80/286 (27%), Gaps = 18/286 (6%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL+ ++  +  M A    A     VK N+      +I   L   G  +F V S  E  KL
Sbjct: 21  DLSVVEKKYLEMKAALKKADIYYAVKANS--H--PRIISLLARLG-SNFDVASKGEIEKL 75

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
                  +          +E I F       + +V       K+          ++V+T 
Sbjct: 76  LALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVFVRVETD 135

Query: 132 FNRLGL--------SLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQL--ER 181
                         + + AL     +   KL    L     +   +P S   ++++    
Sbjct: 136 GADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAIEIAGRV 195

Query: 182 FRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEAR 241
           F+  +     +          +        +   G       + I+++      +   A 
Sbjct: 196 FKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGK---AIEEAIDENLWFVHNLKVIAE 252

Query: 242 IILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLD 287
                   AG LV+    K             G   G   T+   +
Sbjct: 253 PGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFE 298


>gi|255034819|ref|YP_003085440.1| alanine racemase domain-containing protein [Dyadobacter
          fermentans DSM 18053]
 gi|254947575|gb|ACT92275.1| alanine racemase domain protein [Dyadobacter fermentans DSM
          18053]
          Length = 370

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 14 TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
          + +++N  SM +L+G+  R    VK       C  +     +AG+  F   ++ E   + 
Sbjct: 22 SRIESNIRSMVSLAGSKDRLVPHVKT----HKCPDVVAMHLSAGITKFKCATIAEAEMVA 77

Query: 73 LYT 75
             
Sbjct: 78 TAG 80


>gi|163758927|ref|ZP_02166014.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
 gi|162284217|gb|EDQ34501.1| putative ornithine, dap, or arginine decarboxylase protein [Hoeflea
           phototrophica DFL-43]
          Length = 377

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 60/224 (26%), Gaps = 17/224 (7%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +++N+ S      ++     VK N       +I   L   G  +F   SV E 
Sbjct: 20  LVVDLDVVRDNFVSFRKALPDSSIYYAVKANP----APEILRLLAGLG-SNFDCASVAEI 74

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
                    +           +  I     L   + +V       K+           +V
Sbjct: 75  EMALKAGATSARVSYGNTIKKERDIARAHALGVTLFAVDSHEEVEKIARAAPGARVFCRV 134

Query: 129 DT--------GFNRLGLSLQEALDFTHNSFNKKLGQL---SLIISHLACADDPSSHVNSV 177
            T           + G   Q A+D    +    L        + S +   D   + ++  
Sbjct: 135 LTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVSHGVSFHVGSQMTKLDAWDAALSDA 194

Query: 178 QLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYG 221
               F  L      ++                      G +++G
Sbjct: 195 -RRVFDKLAQQGIHLKMVNMGGGFPTRYLKDIPTAQAYGQAIHG 237


>gi|323142966|ref|ZP_08077674.1| hypothetical protein HMPREF9444_00282 [Succinatimonas hippei YIT
           12066]
 gi|322417239|gb|EFY07865.1| hypothetical protein HMPREF9444_00282 [Succinatimonas hippei YIT
           12066]
          Length = 368

 Score = 37.3 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 63/232 (27%), Gaps = 31/232 (13%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
             +  N +    ++  + R    VK         ++   L   G+  F   ++ E   + 
Sbjct: 20  DIIDQNINKAVNMAHTSERLWPHVKT----HKIPQMVNNLVKHGITKFKCATIAECEMV- 74

Query: 73  LYTPQARIFVLYGIHPGQEKIIFDTNLIPVI-------SSVPQLTFYSKLMSC-GVSHPY 124
             TP   I + Y +     K                   ++ Q+   SK   C      +
Sbjct: 75  ANTPATDILLAYPLIGPNIKRYIKLQQTFREKKFYAIGDNLEQIKLLSKEAVCTNEIIHF 134

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSS-----------H 173
            + V+ G NR G+ +++         N K     + +  L C D   +            
Sbjct: 135 FIDVNMGMNRTGVPIEKLNLLADGIKNLKN----IQLCGLHCYDGNHNDKDLIKRRESVD 190

Query: 174 VNSVQLERFRTLISHYKGIEASLASSSGIL--LGPNYHFQLTRPGISLYGGT 223
               QL      I+    I   + +           Y      PG       
Sbjct: 191 TTMNQLMPIIEKINKDFNINLIIIAGGSPAFPCYDKYEKVYCSPGTLFVNDY 242


>gi|312961902|ref|ZP_07776399.1| alanine racemase [Pseudomonas fluorescens WH6]
 gi|311283712|gb|EFQ62296.1| alanine racemase [Pseudomonas fluorescens WH6]
          Length = 378

 Score = 37.3 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 47/175 (26%), Gaps = 11/175 (6%)

Query: 11  IDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  ++ N   M         R    +K       C  +  A   AG     V++++E 
Sbjct: 15  IDIPRMQRNIQRMQQRLNDLGVRLRPHIKT----SKCLPVIHAQIAAGASGVTVSTLKEA 70

Query: 69  VKLRLYTPQARIF---VLYGIHPGQEKIIFDTNLIP--VISSVPQLTFYSKLMSCGVSHP 123
                   +   +   +  G  P    +      +     S        +          
Sbjct: 71  QHCFAAGIRDVFYAVAIAPGKLPQALALRRQGCNLSLLTDSVAGAEAIVAFAQQQDERFD 130

Query: 124 YALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
             +++D   +R GL+                G     +   A +     +  ++Q
Sbjct: 131 MWIEIDCDGHRSGLAADAPALLEVAQSLSNGGMHLRGVMTHAGSSYELDNPQALQ 185


>gi|307265218|ref|ZP_07546777.1| alanine racemase domain-containing protein [Thermoanaerobacter
          wiegelii Rt8.B1]
 gi|306919840|gb|EFN50055.1| alanine racemase domain-containing protein [Thermoanaerobacter
          wiegelii Rt8.B1]
          Length = 79

 Score = 37.3 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 11/65 (16%)

Query: 6  FLRLKIDLTALKNNWHSMNALS--GNARTAAVVK---DNAYGLGCEKIAPALYNAGVQDF 60
          +  L+I+L  L+ N  ++  L    N +   V K            +IA  +   GV+  
Sbjct: 2  YPLLRINLEKLRKNTQTIVNLCEKRNIKVVGVTKVFCA------IPEIAQTMVKGGVEIL 55

Query: 61 FVTSV 65
            + +
Sbjct: 56 GDSRI 60


>gi|146343068|ref|YP_001208116.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278]
 gi|146195874|emb|CAL79901.1| putative ornithine decarboxylase [Bradyrhizobium sp. ORS278]
          Length = 380

 Score = 37.3 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 41/148 (27%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDN----------------------------- 39
           L +DL  +++N+ +      ++R    VK N                             
Sbjct: 23  LVVDLDIVRDNYMNFARALPDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIEMALA 82

Query: 40  --------AYGLGCEK---IAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHP 88
                   +YG   +K   IA A Y  G++ F V    E  K+    P A++F       
Sbjct: 83  AGATPDRISYGNTIKKERDIARA-YALGIRLFAVDCAAEVEKISRAAPGAKVFCRILYDC 141

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSKLM 116
              +               ++   +K +
Sbjct: 142 AGAEWPLSRKFGCDPEMAVEVLDLAKRL 169


>gi|258542635|ref|YP_003188068.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-01]
 gi|256633713|dbj|BAH99688.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-01]
 gi|256636772|dbj|BAI02741.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-03]
 gi|256639825|dbj|BAI05787.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-07]
 gi|256642881|dbj|BAI08836.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-22]
 gi|256645936|dbj|BAI11884.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-26]
 gi|256648989|dbj|BAI14930.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-32]
 gi|256651976|dbj|BAI17910.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655033|dbj|BAI20960.1| aspartate:alanine antiporter [Acetobacter pasteurianus IFO 3283-12]
          Length = 563

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 322 ITDSLSIEVGDYIQIFGPDIKLDDVALASGTT 353
           +T S+ ++ GD + + G    +   A   GT 
Sbjct: 348 VTGSMQVKDGDIVTLLGTSADVQRAAAQIGTI 379


>gi|254255433|ref|ZP_04948749.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158]
 gi|124901170|gb|EAY71920.1| hypothetical protein BDAG_04773 [Burkholderia dolosa AUO158]
          Length = 398

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 11/137 (8%)

Query: 11  IDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           ID+  +  N   M     +   R    VK       C ++  A   AG +   V++++E 
Sbjct: 35  IDVARMNRNIERMQQRMNALGVRFRPHVKT----TKCTQVVDAQMKAGARGITVSTLKEA 90

Query: 69  VKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHP 123
            +      +  ++ +             +       I   S        +          
Sbjct: 91  ERFFAGGIRDIVYAVGIAPSKLPQALALRRQGCDLKIVADSVACADAIVAFGREHAERFD 150

Query: 124 YALQVDTGFNRLGLSLQ 140
             +++D   +R G++  
Sbjct: 151 VWIEIDVDGHRSGIAPD 167


>gi|313829074|gb|EFS66788.1| conserved domain protein [Propionibacterium acnes HL063PA2]
          Length = 136

 Score = 37.3 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 8/134 (5%)

Query: 7   LRLKIDLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKI-APALYNAGVQDFFVT 63
            RL+I    +++N  ++         + AAV K     L    +   AL + G+     +
Sbjct: 6   PRLEIFADRIRDNARAIVTQCAKHGVQVAAVTKV----LHAHPVLLQALEDTGITMLADS 61

Query: 64  SVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLM-SCGVSH 122
            ++   ++          +L                I + SS+  +T  S+     G  H
Sbjct: 62  RLQNLRQIAECGTSLPTMLLRAPGRHDIDDTVQLADISLNSSLTTMTALSEAAVRAGTRH 121

Query: 123 PYALQVDTGFNRLG 136
              + VD G  R G
Sbjct: 122 GVIVMVDVGDLREG 135


>gi|90418219|ref|ZP_01226131.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337891|gb|EAS51542.1| ornithine decarboxylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 406

 Score = 37.3 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 21 HSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARI 80
            M A  G+   A  VK N    G   +   L  AGV+ F V S  E   +R   P A +
Sbjct: 34 RFMAAFPGDTAYA--VKTN----GEPMVLETLSRAGVRIFDVASPGEFEAVRAAQPDAEM 87

Query: 81 FVLYG 85
            ++ 
Sbjct: 88 LYMHP 92


>gi|307946080|ref|ZP_07661415.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4]
 gi|307769744|gb|EFO28970.1| lysine/ornithine decarboxylase [Roseibium sp. TrichSKD4]
          Length = 376

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          + +DL  +++N+H+      +      VK N       +I   L + G   F   SV E
Sbjct: 19 VVVDLDIVRDNYHAFARSLPDTSVYYAVKANP----APEILSLLESLG-SCFDCASVGE 72


>gi|288957461|ref|YP_003447802.1| ornithine decarboxylase [Azospirillum sp. B510]
 gi|288909769|dbj|BAI71258.1| ornithine decarboxylase [Azospirillum sp. B510]
          Length = 382

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L IDL  ++ N++ ++    +AR    VK N       +I   L   G   F   SV E
Sbjct: 19 LVIDLDVVEQNYNDLHDALPDARIFYAVKANP----AAEILGLLARLG-SAFDCASVPE 72


>gi|223936213|ref|ZP_03628126.1| alanine racemase domain protein [bacterium Ellin514]
 gi|223895075|gb|EEF61523.1| alanine racemase domain protein [bacterium Ellin514]
          Length = 368

 Score = 37.3 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 19/68 (27%), Gaps = 6/68 (8%)

Query: 12 DLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
          D  AL+ N   M A   +  +      K       C KI      AG        + E  
Sbjct: 25 DADALQANIDRMAAFFVNRPSGLRPHFKS----HKCTKIVRLQMQAGAVGITCAKLGEAE 80

Query: 70 KLRLYTPQ 77
           L     +
Sbjct: 81 VLADAGIR 88


>gi|6174840|dbj|BAA86032.1| low-specificity D-threonine aldolase [Achromobacter xylosoxidans
           subsp. xylosoxidans]
          Length = 377

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 32/135 (23%), Gaps = 24/135 (17%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
             L +DL A + N  +M A +     A     K       C +IA      G +      
Sbjct: 27  PSLVLDLPAFEANLRAMQAWADRHEVALRPHAKA----HKCPEIALRQLALGARGICCQK 82

Query: 65  VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
           V E                    P        T      S+ P    ++   +   S   
Sbjct: 83  VSEA--------------CPSWPPASATSTSATKW----SARPSWRCWANWRAPPRSACA 124

Query: 125 ALQVDTGFNRLGLSL 139
                T  +      
Sbjct: 125 WTTPKTWRSVGRHDP 139


>gi|256026446|ref|ZP_05440280.1| putative amino acid racemase [Fusobacterium sp. D11]
 gi|289764458|ref|ZP_06523836.1| alanine racemase domain-containing protein [Fusobacterium sp.
          D11]
 gi|289716013|gb|EFD80025.1| alanine racemase domain-containing protein [Fusobacterium sp.
          D11]
          Length = 78

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 6  FLRLKIDLTALKNNWHSMNALSGNART-AAVV-KDNAYGLGCE-KIAPALYNAGVQDFFV 62
          + RL+I++  LK N   ++ L        A+V K     L    ++        +     
Sbjct: 2  YPRLEINIEKLKTNLQVISNLLKKNNISLAMVTKAYCANLDIVNELVK--DKNLIDYLAD 59

Query: 63 TSVEEGVKLRLYTPQARIF 81
          + +E   ++R       + 
Sbjct: 60 SRIENLKEMRHINIPKILL 78


>gi|254496840|ref|ZP_05109691.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12]
 gi|254353967|gb|EET12651.1| metal-activated pyridoxal enzyme [Legionella drancourtii LLAP12]
          Length = 375

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 94/338 (27%), Gaps = 52/338 (15%)

Query: 9   LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L +D   L++N   M             + +T            C K+A    + G    
Sbjct: 18  LVLDKDILRSNLDVMRQHVITNKINLRPHCKT----------HKCSKLAQLQIDYGAIGV 67

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNL------IPVISSVPQLTFYSK 114
               + E   L        +     +   +   +           + V +    L     
Sbjct: 68  CAAKISEAEVLIQNRIPNVLITSPIVTKNKITRLMACIETAPATLVVVDNEENILALNHA 127

Query: 115 LMSCGVSHPYALQVDTGFNRLGLSLQEALDFTHNSFNKKL------GQLSLIISHLACAD 168
             SC       + VD+G  R G+  + AL+F                  +  + H+A  +
Sbjct: 128 GESCQKMIHVLVDVDSGIGRTGVKPEHALNFAMKISALPWLKLMGIQCYAGNLQHIASFN 187

Query: 169 D-PSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGP----NYHFQLTRPGIS----- 218
           +     ++++Q+          +G+   + + +G                +PG       
Sbjct: 188 ERRQKSLSTMQMASELVSCFKAQGLNCPILTGTGTGTYDIDIEATGVTEIQPGSYAVMDV 247

Query: 219 ---LYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY 275
                G  + + +    +  +T    +I   +A   E V+     K           I  
Sbjct: 248 EYAAIGAKESMKQFDVFKPAMTLLTTVISTHRA---EHVTVDAGTKAIYVDQTYKPRIIS 304

Query: 276 ADGYPLTLSGLDSEHSPSVFLGGKGFIKGYMVPILGKI 313
             G      G   EH           + G  +P+ G++
Sbjct: 305 HQGLEYDWGGFGDEHGKITA------VAGTKLPLCGEV 336


>gi|149178497|ref|ZP_01857086.1| alanine racemase-like protein [Planctomyces maris DSM 8797]
 gi|148842710|gb|EDL57084.1| alanine racemase-like protein [Planctomyces maris DSM 8797]
          Length = 366

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 35/144 (24%), Gaps = 23/144 (15%)

Query: 11  IDLTALKNNWHSM--------NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
           IDL  ++ N   M             + +                IA A   AG      
Sbjct: 20  IDLDIMEANIQKMSDYILSRGKTWRPHEKC----------HKTPAIALAQMGAGAIGVTC 69

Query: 63  TSVEEGVKLRLYTPQARIFVLYGIHPGQEK-----IIFDTNLIPVISSVPQLTFYSKLMS 117
             V E   +     +  +     +   + +           +I                 
Sbjct: 70  AKVSEAEVMAAAGVKDILIANMIVGKTKWERVVSLCRHARPIIACDHYAQIEPLAKMCAD 129

Query: 118 CGVSHPYALQVDTGFNRLGLSLQE 141
            GV      +V+ G NR+G    +
Sbjct: 130 AGVVCRMMPEVNIGLNRVGSRPGQ 153


>gi|54308463|ref|YP_129483.1| hypothetical protein PBPRA1270 [Photobacterium profundum SS9]
 gi|46912892|emb|CAG19681.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 424

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 44/354 (12%), Positives = 92/354 (25%), Gaps = 36/354 (10%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPAL----YNAGVQ 58
                 I  +AL NN   M   + +   + +          G   + PA       AG  
Sbjct: 45  SLPAAVIKQSALTNNMEWMQTFANHHQVKLSP--------HGKTTMTPAFFEQQLQAGAW 96

Query: 59  DFFVTS---VEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY--- 112
              V +   V+   +           ++   +      +   N +     V         
Sbjct: 97  GLTVATAPHVQAAAEAGAENIMMANQLVGKANMEIVAKVIQHNGVNFYCCVDSTDNADQL 156

Query: 113 -SKLMSCGVSHPYALQVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDP 170
                  GV+    ++      R    + +E +   H+  N     L+ I  +       
Sbjct: 157 NQFFTVIGVNLNVLIEAGVEGGRCGCRTPEEVIALAHHINNLPALNLAGIEVYEGVIHGD 216

Query: 171 SSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSH 230
           ++  +  Q              E  +  ++ I+ G              +     +    
Sbjct: 217 NAEQDIRQFLAQTIQTVELLTKEKLITDTNPIITGAGSA--WYDVVAESFAACQHLTAII 274

Query: 231 PMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL--------T 282
                V  +  I    + L  +               +  A   +A              
Sbjct: 275 RPGCYVIHDTGIYEDAQNLVMDRAEQNHGYACELGGNLESALEVWAYVLSRPETNKAVVG 334

Query: 283 LSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT---MDM-TMFDITDSLSIEVGD 332
           L   D      + +  +G+  G  + + G +    MD  T   + D + ++VGD
Sbjct: 335 LGKRDVAFDAGLPIPERGYRSGEAISVKGLVATAIMDQHTFVTVPDGVDLKVGD 388


>gi|260061620|ref|YP_003194700.1| D-threonine aldolase, metal-activated pyridoxal enzyme
           [Robiginitalea biformata HTCC2501]
 gi|88785752|gb|EAR16921.1| D-threonine aldolase, metal-activated pyridoxal enzyme
           [Robiginitalea biformata HTCC2501]
          Length = 377

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 48/157 (30%), Gaps = 12/157 (7%)

Query: 16  LKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
           ++ N  +M  ++G+  R    +K         +I       G+  F   ++ E   L   
Sbjct: 34  IRRNIDAMIRIAGSPDRLRPHIKT----HKTAEIIQMQRGRGIDRFKCATIAEAELLGSL 89

Query: 75  TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYA-------LQ 127
                +     + P QE+++      P +     +     L + G             L 
Sbjct: 90  GAGDILLAYQPVGPDQERLLRLQAAYPGVRFAALVDHEETLKALGELATSHNAQIRLYLD 149

Query: 128 VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHL 164
           ++TG +R G+    A    +          +  +   
Sbjct: 150 LNTGMDRTGIVPGAAAAALYRKIAAHPHLEACGLHAY 186


>gi|54298526|ref|YP_124895.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris]
 gi|53752311|emb|CAH13743.1| hypothetical protein lpp2590 [Legionella pneumophila str. Paris]
          Length = 376

 Score = 37.0 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 53/195 (27%), Gaps = 27/195 (13%)

Query: 9   LKIDLTALKNNWHSMNA--------LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
           L ID   LK N   M          +  + +T            C +IA      G    
Sbjct: 18  LVIDYEKLKYNLKMMQEHGFKWGIGIRPHCKT----------HKCTQIARLQLEYGAIGI 67

Query: 61  FVTSVEEGVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISS--VPQLTFYSKLMSC 118
               + E   L        +     +   +   +F+           V        L   
Sbjct: 68  SAAKLSEAEVLVSKQIANVLITSPIVSEAKHSRLFNCLKSAPDLMLVVDGKDNIRMLNEL 127

Query: 119 GVSHPYALQ----VDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
           G S    +     +D+G  R G++ + AL++ H        +L  I      A       
Sbjct: 128 GKSLNQPVYVLLDIDSGIGRTGINPEAALEYGHFINGMNWLKLKGIQC---YAGHLQHIQ 184

Query: 175 NSVQLERFRTLISHY 189
           N  + + F   I   
Sbjct: 185 NYEERKAFSLQIMEM 199


>gi|73669670|ref|YP_305685.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro]
 gi|72396832|gb|AAZ71105.1| ornithine decarboxylase [Methanosarcina barkeri str. Fusaro]
          Length = 390

 Score = 37.0 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  ++ ++  +      A+    VK N      +++  AL + G  +F V +V E 
Sbjct: 34  LTVDLQKIEQSYDELVEHMPFAKIHYAVKANP----MDEVVLALKSKG-SNFDVATVYEL 88

Query: 69  VKLRLYTPQARIF 81
            +L     +    
Sbjct: 89  DQLLRLGVEPERI 101


>gi|119963284|ref|YP_946033.1| alanine racemase N-terminal domain-containing protein
          [Arthrobacter aurescens TC1]
 gi|119950143|gb|ABM09054.1| putative alanine racemase, N-terminal domain protein
          [Arthrobacter aurescens TC1]
          Length = 366

 Score = 37.0 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 20/84 (23%), Gaps = 18/84 (21%)

Query: 11 IDLTALKNNWHSMN--------ALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFV 62
          ID+  L  N   M          L  + +T              +IA     AG     V
Sbjct: 15 IDVDVLDRNIERMAGNMRGRGLQLRPHVKT----------HKTLEIARKQLAAGALGITV 64

Query: 63 TSVEEGVKLRLYTPQARIFVLYGI 86
           ++ E         +         
Sbjct: 65 ATIGEAEVFAADGVKDIFIAFPLW 88


>gi|254705776|ref|ZP_05167604.1| metal-activated pyridoxal protein [Brucella pinnipedialis
           M163/99/10]
 gi|261313198|ref|ZP_05952395.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M163/99/10]
 gi|261302224|gb|EEY05721.1| alanine racemase domain-containing protein [Brucella pinnipedialis
           M163/99/10]
          Length = 355

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 44/163 (26%), Gaps = 12/163 (7%)

Query: 11  IDLTALKNNWHSMNALS--GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           +D+  +  N     A +     +    +K           A     AG        + E 
Sbjct: 18  VDVDRVVANIEKAQAHADAAGVKLRPHIKT----HKLPFFARMQVKAGAVGITCQKLGEA 73

Query: 69  VKLRLYTPQARIFVLYG-IHPGQEKIIFDTNLIPVISSVPQLTFYS----KLMSCGVSHP 123
             +                    +++      I +  +V   T  +      M+      
Sbjct: 74  EVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKRPLK 133

Query: 124 YALQVDTGFNRLGLS-LQEALDFTHNSFNKKLGQLSLIISHLA 165
             ++ DTG  R G+    +A +  H            ++++ A
Sbjct: 134 VLVECDTGMGRCGVQTPGQARELAHIIEKSAGLCFVGLMTYPA 176


>gi|115526790|ref|YP_783701.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53]
 gi|115520737|gb|ABJ08721.1| ornithine decarboxylase [Rhodopseudomonas palustris BisA53]
          Length = 380

 Score = 37.0 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ +      ++R    VK N       ++   L + G   F   SV E
Sbjct: 23 LVVDLEVVRDNFQTFATALPDSRVFYAVKANP----APEVLTLLASMG-SCFDCASVAE 76


>gi|295695164|ref|YP_003588402.1| alanine racemase domain protein [Bacillus tusciae DSM 2912]
 gi|295410766|gb|ADG05258.1| alanine racemase domain protein [Bacillus tusciae DSM 2912]
          Length = 389

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 9/130 (6%)

Query: 36  VKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQ----ARIFVLYGIHPGQE 91
           VK         +IA     AG Q   V  + E         +    A   +         
Sbjct: 49  VKA----HKTVEIARRQRMAGTQGITVAKLGEAEVFAEAGFRDITVAYPVISAVKRDRLA 104

Query: 92  KIIFDTNLIPVISSVPQLTFYSKLMSCG-VSHPYALQVDTGFNRLGLSLQEALDFTHNSF 150
            +     +  V   + Q+   +++     V+    L+VDTG  R G+   E         
Sbjct: 105 ALAARARVTTVADDLEQVDLLARMAEERAVTVGLWLKVDTGLYRCGIPTAEEDRAAAVVS 164

Query: 151 NKKLGQLSLI 160
              L +    
Sbjct: 165 RILLWEKRWR 174


>gi|189242004|ref|XP_001807057.1| PREDICTED: hypothetical protein, partial [Tribolium castaneum]
          Length = 765

 Score = 37.0 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/245 (5%), Positives = 46/245 (18%), Gaps = 22/245 (8%)

Query: 81  FVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFN------- 133
           +  +  +   ++     N      +      +        +        + +N       
Sbjct: 358 WYDWNWYRNWDRFHSRYNWKWYGFNTGYNWNWVNFNFWSFNFRKWYWFYSRYNWYWVNFN 417

Query: 134 --RLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKG 191
             R     +   +  ++              +    +      N  +   F +  + Y  
Sbjct: 418 LWRFDFWKRYWFNSWYDWNWYWHWNRFNSGYNWYRINFNFWSFNFRKWYWFYSGYNWYWV 477

Query: 192 IEASLASSSGILLGPNYHFQLT----------RPGISLYGGTDKINKSHPMQTVVTAEAR 241
                          N  +             R     YG   + N +       +   R
Sbjct: 478 NLNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYNWNWVNFDFWSFNFR 537

Query: 242 IILIRKALAGELVSYGGQKKL---TRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGG 298
                 +            +     R    +     +   +    S  + +         
Sbjct: 538 KWYWFYSGYNWYWVNLNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 597

Query: 299 KGFIK 303
             ++ 
Sbjct: 598 WNWVN 602


>gi|168704641|ref|ZP_02736918.1| alanine racemase domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 366

 Score = 37.0 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 23/80 (28%), Gaps = 6/80 (7%)

Query: 7  LRLKIDLTALKNNWHSM--NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTS 64
           +L +DL  +  N   M   A     R     K     L C  +A  +  AG   F    
Sbjct: 21 PQLLVDLDVVDGNVRRMFAAARGRGVRVRVHFKS----LKCTGLARHVAAAGPDGFAAAK 76

Query: 65 VEEGVKLRLYTPQARIFVLY 84
          + E   L        +    
Sbjct: 77 LNEAEALADAGVTDILLANQ 96


>gi|134095890|ref|YP_001100965.1| metal-activated pyridoxal protein [Herminiimonas arsenicoxydans]
 gi|133739793|emb|CAL62844.1| putative amino acid aldolase/racemase [Herminiimonas
           arsenicoxydans]
          Length = 380

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 73/307 (23%), Gaps = 36/307 (11%)

Query: 12  DLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           DL A + N  +M AL+     A     K          I+ A    G        + E  
Sbjct: 30  DLDAFEFNLCNMAALAKKNGLALRPHAKA----HKSSTISRAQIALGAVGICCQKLSEAY 85

Query: 70  KLRLYTPQARIFVLYGIHPGQEKIIFD-----TNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                           +   +  +  +        I V              + GV+   
Sbjct: 86  PFVRAGIDNIHISNEFVGADKVAMAVELAGLIQLSICVDHVAQVDAIGKAASAAGVTIIV 145

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRT 184
             +VD G  R G+   EAL    +      G     +   A            Q      
Sbjct: 146 MPEVDVGHGRCGVDSNEALAALIDRIAAYPGLQFGGLQ--AYNGGIQHLATWEQRRLEAA 203

Query: 185 LISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIIL 244
             +           ++  +        L+        GT + + +  + T +   + I L
Sbjct: 204 RSAD---------RTAQYIQFLEARGVLSPVVSGAGTGTVEFDVASGVYTEMQPGSYIFL 254

Query: 245 IRKALAGELVSYGG---------QKKLTRDSLIAVAAIGYAD-----GYPLTLSGLDSEH 290
                + E                   T     AV  +G        G P   +G   + 
Sbjct: 255 DGHYGSNEWAGEYMPQHGLFILSTIMSTAKPHKAVCDVGLKGVAVDSGLPRVRAGDYEDK 314

Query: 291 SPSVFLG 297
              V   
Sbjct: 315 LRYVSAN 321


>gi|50059374|gb|AAT69413.1| alanine racemase [Borrelia afzelii ACA-1]
 gi|50059379|gb|AAT69417.1| alanine racemase [Borrelia garinii]
          Length = 42

 Score = 37.0 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 10/22 (45%)

Query: 23 MNALSGNARTAAVVKDNAYGLG 44
          +    G     A +K +AYG G
Sbjct: 21 IKNKIGEKEIVATLKGDAYGHG 42


>gi|119494577|ref|ZP_01624710.1| hypothetical protein L8106_15824 [Lyngbya sp. PCC 8106]
 gi|119452083|gb|EAW33294.1| hypothetical protein L8106_15824 [Lyngbya sp. PCC 8106]
          Length = 193

 Score = 37.0 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 10/112 (8%)

Query: 20  WHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK----LRLY 74
              + +   ++ R  AV K         +     Y AG++DF    + E ++    L+  
Sbjct: 9   IAEIRSQVPDSVRIVAVTKTV-----SVEAIRIAYAAGIRDFGENRISEAMEKQEQLQDL 63

Query: 75  TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYAL 126
           +      + +       K +     I  + S+       +L       P   
Sbjct: 64  SDITWHLIGHIQSNKAIKAVQHFQWIHSVDSLKLAQRLDRLAQESDCQPQVC 115


>gi|170738789|ref|YP_001767444.1| ornithine decarboxylase [Methylobacterium sp. 4-46]
 gi|168193063|gb|ACA15010.1| Ornithine decarboxylase [Methylobacterium sp. 4-46]
          Length = 390

 Score = 37.0 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 12 DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          DL  +++N+H+      + R    VK N       ++   L + G   F   SV E
Sbjct: 28 DLDVVRDNYHAFARALPDTRVFYAVKANP----APEVLGLLASLG-SCFDTASVAE 78


>gi|282857080|ref|ZP_06266327.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455]
 gi|282585089|gb|EFB90410.1| metal-activated pyridoxal enzyme [Pyramidobacter piscolens W5455]
          Length = 369

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/83 (12%), Positives = 21/83 (25%), Gaps = 18/83 (21%)

Query: 9  LKIDLTALKNNWHSMNALS--------GNARTAAVVKDNAYGLGCEKIAPALYNAGVQDF 60
          L +D   + +N  +M   +         + +T               IA    + G +  
Sbjct: 11 LLVDREIMMDNIRAMQNRANRKGVALRPHTKT----------HKTPAIALIQRDCGCKGI 60

Query: 61 FVTSVEEGVKLRLYTPQARIFVL 83
           V  + E   +            
Sbjct: 61 AVAKLGEAEVMADAGFDDIFIAN 83


>gi|148252905|ref|YP_001237490.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1]
 gi|146405078|gb|ABQ33584.1| ornithine decarboxylase [Bradyrhizobium sp. BTAi1]
          Length = 380

 Score = 37.0 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 41/148 (27%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDN----------------------------- 39
           L +DL  +++N+ +      ++R    VK N                             
Sbjct: 23  LVVDLDVVRDNYMNFAKALPDSRVFYAVKANPAPEVLSLLASLGSSFDTATVAEIEMALA 82

Query: 40  --------AYGLGCEK---IAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYGIHP 88
                   +YG   +K   IA A Y  G++ F V    E  K+    P A++F       
Sbjct: 83  AGATPDRISYGNTIKKERDIARA-YALGIRLFAVDCAAEVEKISRAAPGAKVFCRILYDC 141

Query: 89  GQEKIIFDTNLIPVISSVPQLTFYSKLM 116
              +               ++   +K +
Sbjct: 142 AGAEWPLSRKFGCDPEMAVEVLDLAKRL 169


>gi|254420313|ref|ZP_05034037.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
          protein [Brevundimonas sp. BAL3]
 gi|196186490|gb|EDX81466.1| Pyridoxal-dependent decarboxylase, pyridoxal binding domain
          protein [Brevundimonas sp. BAL3]
          Length = 399

 Score = 36.6 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 29 NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLYTPQARIFVLYG 85
           A     VK N        +   L  AGV+ F V S+ E   +R  +   R+  ++ 
Sbjct: 18 KADVFYAVKANP----SRWVIETLIEAGVRGFDVASIAEIELVRSVSHDVRLAFMHP 70


>gi|91975336|ref|YP_567995.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5]
 gi|91681792|gb|ABE38094.1| ornithine decarboxylase [Rhodopseudomonas palustris BisB5]
          Length = 380

 Score = 36.6 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  +++N+ S      ++R    VK N       ++   L + G   F   SV+E
Sbjct: 23 LVVDLEVVRDNFTSFARALPDSRVFYAVKANP----APEVLSLLASLG-SCFDCASVQE 76


>gi|323136936|ref|ZP_08072016.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242]
 gi|322397697|gb|EFY00219.1| Orn/DAP/Arg decarboxylase 2 [Methylocystis sp. ATCC 49242]
          Length = 381

 Score = 36.6 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 9  LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
          L +DL  ++ N+        + R    VK N       ++   L + G   F   SV E
Sbjct: 23 LVVDLDVVRENYLGFAKALPDTRVFYAVKANP----APEVLSLLASLG-SCFDTASVVE 76


>gi|261329626|emb|CBH12608.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 502

 Score = 36.6 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 9/145 (6%), Positives = 25/145 (17%), Gaps = 9/145 (6%)

Query: 74  YTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSH---PYALQVDT 130
                         P   +               +   +       +             
Sbjct: 79  AAVPQPPMAAVPQPPMAAQFHNHQWQQFHNHQWQRFHNHQWQQFHNLQWQQSHNHQWQQF 138

Query: 131 GFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFR--TLISH 188
             ++            HN   ++   L    SH    +      ++ Q ++F        
Sbjct: 139 HNHQWQRFHNHQWQRFHNHQWQQFHNLQWQRSH----NHQWQRFHNHQWQQFHNLQWQQF 194

Query: 189 YKGIEASLASSSGILLGPNYHFQLT 213
           +        +        +   Q  
Sbjct: 195 HNHQWQRFHNHQWQRFHNHQWQQFH 219


>gi|183227667|dbj|BAG24498.1| D-threo-3-hydroxyaspartate dehydratase [Delftia sp. HT23]
          Length = 380

 Score = 36.6 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 11/152 (7%)

Query: 9   LKIDLTALKNNWHSMNAL--SGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVE 66
             IDL  ++ N   M     +   R    VK          +A A   AG     V++++
Sbjct: 13  AVIDLDRMQRNIARMQQRMDAQGVRLRPHVKT----SKSVPVAAAQRAAGASGITVSTLK 68

Query: 67  EGVKLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVS 121
           E  +         ++ +           Q +       + V S        +     G +
Sbjct: 69  EAEQFFAAGTTDILYAVSMAPHRLPQALQLRRRGCDLKLIVDSVAAAQAIAAFGREQGEA 128

Query: 122 HPYALQVDTGFNRLGLSLQEALDFTHNSFNKK 153
               +++DT  +R G+   +            
Sbjct: 129 FEVWIEIDTDGHRSGVGADDTPLLLAIGRTLH 160


>gi|296123157|ref|YP_003630935.1| alanine racemase domain protein [Planctomyces limnophilus DSM
          3776]
 gi|296015497|gb|ADG68736.1| alanine racemase domain protein [Planctomyces limnophilus DSM
          3776]
          Length = 374

 Score = 36.6 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 17/74 (22%)

Query: 9  LKIDLTALKNNWHSM-------NALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
          L IDL A++ N   M         L  + +T              +++      G++   
Sbjct: 20 LIIDLDAVRENLDHMLAVSGGPERLRPHCKT----------HKMLELSKLEVARGIRRHK 69

Query: 62 VTSVEEGVKLRLYT 75
            +  E   L    
Sbjct: 70 AATFAEAEMLARAG 83


>gi|169842061|ref|ZP_02875166.1| hypothetical protein cdivTM_33162 [candidate division TM7
           single-cell isolate TM7a]
          Length = 37

 Score = 36.6 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query: 345 DVALASGTTNYDLLVR 360
           +VA   GT +Y++L  
Sbjct: 2   EVAELCGTISYEILCG 17


>gi|474034|emb|CAA47165.1| ornithine decarboxylase [Drosophila melanogaster]
          Length = 394

 Score = 36.6 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 53/213 (24%), Gaps = 12/213 (5%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL++++ N      L    +    VK N        +   L   G   F   S  E VKL
Sbjct: 37  DLSSVERNVRLWQKLLPRIKPFYAVKCN----DDPMVVRLLAQLGA-GFDCASKNE-VKL 90

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
            +         +   +P +     +      +S+      +                   
Sbjct: 91  -VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVY-----KLHTHYPNSNL 144

Query: 132 FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKG 191
             R     +EA     + F       +  +  LA + +      S  +    + +  Y  
Sbjct: 145 IVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDR 204

Query: 192 IEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
                 +         Y       G    G  D
Sbjct: 205 AIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDD 237


>gi|330986553|gb|EGH84656.1| alanine racemase domain-containing protein [Pseudomonas syringae
           pv. lachrymans str. M301315]
          Length = 378

 Score = 36.6 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 11/174 (6%)

Query: 12  DLTALKNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGV 69
           D+  ++ N   M         R    VK       C  +  A   AG     V++++E  
Sbjct: 16  DVPRMQRNIQRMQHRMNELGVRLRPHVKT----SKCLPVIQAQIAAGASGVAVSTLKEAE 71

Query: 70  KLRLYTPQARIFVLYGIHPG-----QEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPY 124
                      + +           + +       I   S V      +       +   
Sbjct: 72  HCFAEGINDVFYAVAIAPGKLDQALKLRRNGCRLSILTDSVVAAQAIVAFGQRHDENFDV 131

Query: 125 ALQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
            +++D   +R GL++ +           + G     +   A +        ++Q
Sbjct: 132 WIEIDCDGHRSGLTVDDPSLVEVARTLIEGGMHLRGVMTHAGSSYDLDTPEALQ 185


>gi|209966274|ref|YP_002299189.1| lysine [Rhodospirillum centenum SW]
 gi|209959740|gb|ACJ00377.1| lysine [Rhodospirillum centenum SW]
          Length = 376

 Score = 36.6 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 33/130 (25%), Gaps = 5/130 (3%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  +  N+  ++    +A+    VK N       +I   L   G   F   SV E 
Sbjct: 19  LVVDLDVVARNYDRLSGALPDAKIYYAVKANP----APEILRLLTGLG-SSFDTASVPEI 73

Query: 69  VKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQV 128
                                   I     L   + +        K+ +         ++
Sbjct: 74  EDCLAAGATPDRISYGNTIKKAADIRRAYELGVRLFAFDSEAELEKIAANAPGSRVFCRI 133

Query: 129 DTGFNRLGLS 138
            T        
Sbjct: 134 LTSGEGADWP 143


>gi|474030|emb|CAA47167.1| ornithine decarboxylase [Drosophila melanogaster]
          Length = 394

 Score = 36.6 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 53/213 (24%), Gaps = 12/213 (5%)

Query: 12  DLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKL 71
           DL++++ N      L    +    VK N        +   L   G   F   S  E VKL
Sbjct: 37  DLSSVERNVRLWQKLLPRIKPFYAVKCN----DDPMVVRLLAQLGA-GFDCASKNE-VKL 90

Query: 72  RLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQVDTG 131
            +         +   +P +     +      +S+      +                   
Sbjct: 91  -VLGFDVSPERIIFANPCRPVSHLEYAKEHQVSNGTVDNEFEVY-----KLHTHYPNSNL 144

Query: 132 FNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLISHYKG 191
             R     +EA     + F       +  +  LA + +      S  +    + +  Y  
Sbjct: 145 IVRFKSEAKEAQCPLGDKFGCDADVDAAALMLLAKSLELKVTGTSFHVGSGCSELQAYDR 204

Query: 192 IEASLASSSGILLGPNYHFQLTRPGISLYGGTD 224
                 +         Y       G    G  D
Sbjct: 205 AIKKAKNLFKFGALLGYDMDFLDIGGGFPGSDD 237


>gi|90414786|ref|ZP_01222754.1| hypothetical protein P3TCK_17244 [Photobacterium profundum 3TCK]
 gi|90324091|gb|EAS40676.1| hypothetical protein P3TCK_17244 [Photobacterium profundum 3TCK]
          Length = 424

 Score = 36.6 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 45/360 (12%), Positives = 94/360 (26%), Gaps = 44/360 (12%)

Query: 5   EFLRLKIDLTALKNNWHSMNALSGN--ARTAAVVKDNAYGLGCEKIAPAL----YNAGVQ 58
                 I  +AL NN   M   + +   + +          G   + PA       AG  
Sbjct: 45  SLPAAVIKQSALTNNMEWMQTFANHHQVKLSP--------HGKTTMTPAFFEQQLQAGAW 96

Query: 59  DFFVTS------VEE--GVKLRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLT 110
              V +        E     + +   Q       G+     +         V S+     
Sbjct: 97  GLTVATAPHVQAAAEGGAENIMMAN-QLVGKANMGMVANVIQQNGVNFYCCVDSTDNVDQ 155

Query: 111 FYSKLMSCGVSHPYALQVDTGFNR-LGLSLQEALDFTHNSFNKKLGQLSLIISHLACADD 169
                +   ++    ++      R    + +E +   H+  N       L ++ +   + 
Sbjct: 156 LNQFFVDVEITLNVLIEAGVEGGRCGCRTPEEVITLAHHINNLPA----LNLAGIEVYEG 211

Query: 170 PSSHVNSVQ-LERFRTLISHYKG--IEASLASSSGILLGPNYHFQLTRPGISLYGGTDKI 226
                N+ Q + +F           IE  L + +  ++               +     +
Sbjct: 212 VIHGDNAEQDIRQFLAQTIQTVELLIEEKLITDTNPII-TGAGSAWYDVVAESFAACLHL 270

Query: 227 NKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPL----- 281
                    V  +  I    + L                  +  A   +A          
Sbjct: 271 TAIIRPGCYVIHDTGIYEDAQNLVMGRAEQNHGYACELGGNLESALEVWAYVLSRPETNK 330

Query: 282 ---TLSGLDSEHSPSVFLGGKGFIKGYMVPILGKIT---MDM-TMFDITDSLSIEVGDYI 334
               L   D      + +  +G+  G  + + G +    MD      + D + ++VGD I
Sbjct: 331 AVIGLGKRDVAFDAGLPIPERGYRNGEAISVKGLVATAIMDQHIFVTVPDGVDLKVGDMI 390


>gi|288960554|ref|YP_003450894.1| alanine racemase domain-containing protein [Azospirillum sp.
          B510]
 gi|288912862|dbj|BAI74350.1| alanine racemase domain-containing protein [Azospirillum sp.
          B510]
          Length = 352

 Score = 36.6 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 20/75 (26%), Gaps = 6/75 (8%)

Query: 11 IDLTALKNNWHSMNALSGNARTA--AVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
          IDL  +++N   M A       A    +K         + A      G        + E 
Sbjct: 13 IDLDRVEHNLTKMQAYCDRHGLALRPHIKT----HKLPQFARRQIELGAVGITCQKISEA 68

Query: 69 VKLRLYTPQARIFVL 83
          + +        +   
Sbjct: 69 MVMADAGCTDILLTY 83


>gi|242399484|ref|YP_002994909.1| Deblocking aminopeptidase [Thermococcus sibiricus MM 739]
 gi|242265878|gb|ACS90560.1| Deblocking aminopeptidase [Thermococcus sibiricus MM 739]
          Length = 348

 Score = 36.6 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 45  CEKIAPALYNAGVQDFFVTSVEEGVKLR 72
             ++A AL       +FV SV+E V LR
Sbjct: 187 MIEVARALEEHQADIYFVASVQEEVGLR 214


>gi|212702649|ref|ZP_03310777.1| hypothetical protein DESPIG_00677 [Desulfovibrio piger ATCC
          29098]
 gi|212673921|gb|EEB34404.1| hypothetical protein DESPIG_00677 [Desulfovibrio piger ATCC
          29098]
          Length = 397

 Score = 36.2 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 5/64 (7%)

Query: 6  FLRLKIDLTALKNNWHSMNA--LSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVT 63
             L+I++ AL +N   +     +   R   V+K  A       I   L   G   + + 
Sbjct: 1  MPELEINMDALAHNLRLVQRQEQAWGFRFLPVLKMVA-SH--PDIVDFLRTQGYACYGIA 57

Query: 64 SVEE 67
           + E
Sbjct: 58 DMTE 61


>gi|302524721|ref|ZP_07277063.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4]
 gi|302433616|gb|EFL05432.1| orn/DAP/Arg decarboxylase 2 [Streptomyces sp. AA4]
          Length = 502

 Score = 36.2 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 38/121 (31%), Gaps = 7/121 (5%)

Query: 9   LKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEG 68
           L +DL  ++ +   + A+   AR    VK N       ++   +  AG   F V   EE 
Sbjct: 22  LVVDLDVVRGSCARLRAVLPEARMYYAVKANP----APEVVRVVRQAGA-GFDVAGREE- 75

Query: 69  VKLRLY-TPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGVSHPYALQ 127
           ++L L    +               I F   +     +        KL         + +
Sbjct: 76  IELCLAQGVRPESLSYGNPVKKARDIEFAHRVGVRRFTFDSREDLEKLAEFAPGATVSCR 135

Query: 128 V 128
           +
Sbjct: 136 I 136


>gi|330967859|gb|EGH68119.1| hypothetical protein PSYAC_25113 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 359

 Score = 36.2 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 44/169 (26%), Gaps = 11/169 (6%)

Query: 17  KNNWHSMNALSG--NARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLRLY 74
           + N   M         R    VK          +  A   AG     V++++E       
Sbjct: 2   QRNIQRMQQRMNELGVRLRPHVKT----SKSLPVIQAQIAAGASGVAVSTLKEAEHCFAE 57

Query: 75  TPQARIFVLYGIHPGQEKIIFDTNLIPV-----ISSVPQLTFYSKLMSCGVSHPYALQVD 129
                 + +       ++ +              S V      +            +++D
Sbjct: 58  GISDVFYAVAIAPGKLDQALTLRRNGCRLSLLTDSVVAAQAIVAFGQQHDEQFEVWIEID 117

Query: 130 TGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQ 178
              +R GL++++           + G     +   A +        ++Q
Sbjct: 118 CDGHRSGLTVEDNALIEVAKTLVEGGMQLRGVMTHAGSSYDLDSPEALQ 166


>gi|298244439|ref|ZP_06968245.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
 gi|297551920|gb|EFH85785.1| alanine racemase domain protein [Ktedonobacter racemifer DSM 44963]
          Length = 370

 Score = 36.2 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 62/264 (23%), Gaps = 31/264 (11%)

Query: 7   LRLKIDLTALKNNWHSMNALSGNART-----AAVVKDNAYGLGCEKIAPALYNAGVQDFF 61
             + +DLT ++ N   +       +         VK         ++A  L  AG     
Sbjct: 16  PSMIVDLTLMEENIDRLMQRFREKKIHVRPHLKTVKS-------PELARRLLAAGAVGGC 68

Query: 62  VTSVEEGVKLRLYTPQ----ARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMS 117
           V  V E   +              V          +I     I V+              
Sbjct: 69  VAKVSEAEVMAQEGIDDLLITTEIVGKPKLSRLVTLIQHHPRIKVVIDSFIGAQELNTAL 128

Query: 118 CGVSHPYALQVDTGFNRLGLSL---QEALDFTHNSFNKKLGQLSLIISHLACADDPSSHV 174
                   + +D    +    +   +EAL   H         L  +  +           
Sbjct: 129 HEAQLEIDVLIDLNVGQNRCGVLPGKEALTLAHYCSKLPHLHLVGVQGY---------EG 179

Query: 175 NSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQT 234
           +   +                L  ++  L    +  ++   G +      +I   +   T
Sbjct: 180 HLQHIHSPEERTQRCHQAMRLLTETAAQLRFEGFPIEVVTTGGTGTA---EICADYGGIT 236

Query: 235 VVTAEARIILIRKALAGELVSYGG 258
            V   + I +          +Y  
Sbjct: 237 EVQPGSFIFMDTDYRNALGPTYAN 260


>gi|32474294|ref|NP_867288.1| D-threonine aldolase, metal-activated pyridoxal enzyme
           [Rhodopirellula baltica SH 1]
 gi|32444832|emb|CAD74834.1| D-threonine aldolase, metal-activated pyridoxal enzyme
           [Rhodopirellula baltica SH 1]
          Length = 391

 Score = 36.2 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 53/189 (28%), Gaps = 15/189 (7%)

Query: 14  TALKNNWHSMNALSGNA-RTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVKLR 72
             ++ N   M  ++G A +    VK          I      +G+  F   ++ E     
Sbjct: 40  DRVQANLDRMIEMAGGADKLRPHVKT----HKMPAIVELSVASGITRFKSATIAEAEMTA 95

Query: 73  LYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFY-------SKLMSCGVSHPYA 125
                  +  +  + P   + I      P       +          +     G+     
Sbjct: 96  AAGAVDVLLAVQPVGPNIGRFIKLIQRYPGCLFSCLVDDLSVLASLEAAFELAGLQGSVW 155

Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
           + +D G +R G++  ++      S         + ++ +   D      +S +L R    
Sbjct: 156 IDIDVGMHRTGIAPNDSATELVRSIQTSDH---VRLAGIHVYDGHLHDTDSEKLRRQFDE 212

Query: 186 ISHYKGIEA 194
                 I  
Sbjct: 213 AVKPFWIWF 221


>gi|198437630|ref|XP_002124295.1| PREDICTED: similar to Kielin [Ciona intestinalis]
          Length = 1993

 Score = 35.8 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 11/218 (5%), Positives = 33/218 (15%), Gaps = 6/218 (2%)

Query: 99   LIPVISSVPQLTFYSKLMSCGVSHPYALQVDTGFN---RLGLSLQEALDFTHNSFNKKLG 155
                  +        +      +    L  D   +   R    +                
Sbjct: 962  CQSCRFNNQLFNNEDEFNDPENTCNTCLCEDGNVHCSSRTCTEVNCQNPTFDKCGCPVCF 1021

Query: 156  QLSLIISHLACADDPSSHVNSVQLERFRTLISHYKGIEASLASSSGILLGPNYHFQLTRP 215
              + +       +  +  +N                +    A     ++ P         
Sbjct: 1022 NCNYMGVDYTNNERFTDSMNQCNQCVCTLGTVQCIHVPCPPAPCPSPVVAPGECCSKCIE 1081

Query: 216  GISLYGGTDKINKSHPMQTVVTAEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGY 275
               + G         P      +                         +       +   
Sbjct: 1082 TCDVGGAIHDNGAIFPSADDPCSTCSCSFGTVRCLKFGCDRSCTHPRAQSECCPDCSGCL 1141

Query: 276  ADGYPLTLSGLDSEHSPSVF---LGGKGFIKGYMVPIL 310
              G         +  +         G    +    P++
Sbjct: 1142 YQGVLRNEGEFFTPTNQCKQCSCYRGSVLCRDIRCPVV 1179


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.135    0.425 

Lambda     K      H
   0.267   0.0418    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,299,384,070
Number of Sequences: 14124377
Number of extensions: 211287133
Number of successful extensions: 498461
Number of sequences better than 10.0: 3512
Number of HSP's better than 10.0 without gapping: 2997
Number of HSP's successfully gapped in prelim test: 515
Number of HSP's that attempted gapping in prelim test: 483373
Number of HSP's gapped (non-prelim): 3734
length of query: 370
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 230
effective length of database: 2,865,380,850
effective search space: 659037595500
effective search space used: 659037595500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 82 (36.2 bits)