RPSBLAST alignment of GI: 254780333 and protein with PDBid: 1vfs
>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A* Length = 386
Score = 228 bits (583), Expect = 1e-60
Identities = 100/376 (26%), Positives = 160/376 (42%), Gaps = 29/376 (7%)
Query: 11 IDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEEGVK 70
IDL A++ N ++ A + + AVVK NAYG G A A AG + EE ++
Sbjct: 12 IDLDAVRANVRALRARAPRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALE 71
Query: 71 LRLYTPQARIFVLYGIHPGQEKIIFDTNLIPVISSVPQLTFYSKLMSCGV-SHPYALQVD 129
LR Q RI G + +T++ +S + L + L+ D
Sbjct: 72 LRAAGIQGRIMCWLWTPGGPWREAIETDIDVSVSGMWALDEVRAAARAAGRTARIQLKAD 131
Query: 130 TGFNRLGLSLQEALDFTHNSF---NKKLGQLSLIISHLACADDPSSHVNSVQLERFRTLI 186
TG R G + + + + Q++ + SH ACAD+P +QL+ FR ++
Sbjct: 132 TGLGRNGCQPADWAELVGAAVAAQAEGTVQVTGVWSHFACADEPGHPSIRLQLDAFRDML 191
Query: 187 SHYK-----GIEASLASSSGILLGPNYHFQLTRPGISLYGGT----DKINKSHPMQTVVT 237
++ + +A+S L P HF L R G+++YG + ++ +T
Sbjct: 192 AYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSPELGTPAQLGLRPAMT 251
Query: 238 AEARIILIRKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLG 297
A + L++ AG VSYG ++ +A+ GYADG P SG
Sbjct: 252 LRASLALVKTVPAGHGVSYGHHYVTESETHLALVPAGYADGIPRNASG-----------R 300
Query: 298 GKGFIKGYMVPILGKITMDMTMFDITDSLSIEVGDYIQIFGPD----IKLDDVALASGTT 353
G + G + G+I MD + D+ + L E GD I G +D A A+ T
Sbjct: 301 GPVLVAGKIRRAAGRIAMDQFVVDLGEDL-AEAGDEAVILGDAERGEPTAEDWAQAAHTI 359
Query: 354 NYDLLVRIGTRYAKFY 369
Y+++ RIG R + Y
Sbjct: 360 AYEIVTRIGGRVPRVY 375