RPSBLAST alignment of GI: 254780333 and protein with PDBid: 3kw3
>3kw3_A Alanine racemase; niaid, ssgcid, seattle structural genomics center for infectious disease, iodide SOAK, LLP, CAT-scratch disease; HET: LLP; 2.04A {Bartonella henselae} Length = 376
Score = 276 bits (707), Expect = 5e-75
Identities = 119/365 (32%), Positives = 189/365 (51%), Gaps = 14/365 (3%)
Query: 8 RLKIDLTALKNNWHSMNALSGNARTAAVVKDNAYGLGCEKIAPALYNAGVQDFFVTSVEE 67
ID+ A+ N+ ++ +AVVK NAYGLG KIAPALY AG + FFV +EE
Sbjct: 22 IATIDVRAIVANYRTLAQHVAPTECSAVVKANAYGLGAHKIAPALYQAGCRTFFVAQIEE 81
Query: 68 GVKLRLYTPQARIFVLYGIHPGQ-EKIIFDTNLIPVISSVPQLT-FYSKLMSCGVSHPYA 125
++L+ P+ + L P + E+ + + +IP+++S + + + P
Sbjct: 82 ALQLKAVLPENVMIALLNGFPHKAEEFVAQSGIIPLLNSWSTIEDWQTLCQKKNKKFPAI 141
Query: 126 LQVDTGFNRLGLSLQEALDFTHNSFNKKLGQLSLIISHLACADDPSSHVNSVQLERFRTL 185
+QVDT +RLGL +E N + ++ I+SHLA +D S N+ QL F+ +
Sbjct: 142 IQVDTNMSRLGLDKKELQKLIKNPTIFEKAEIKYILSHLANGEDASHSSNNKQLAAFKRV 201
Query: 186 ISHYKGIEASLASSSGILLGPNYHFQLTRPGISLYGGTDKINKSHPMQTVVTAEARIILI 245
++ + S A+S GI LG +++F L RPGI+LYG P++ VV EA+++
Sbjct: 202 LAQLPTCKVSFANSGGIFLGSDFYFDLVRPGIALYGVDPHGKHPTPLKAVVKVEAQVLQS 261
Query: 246 RKALAGELVSYGGQKKLTRDSLIAVAAIGYADGYPLTLSGLDSEHSPSVFLGGKGFIKGY 305
R AG V Y R S +A +IGYADG+P LS G + G+
Sbjct: 262 RFIDAGIPVGYRESFMTRRPSTLATISIGYADGWPRILSN-----------KGTVYFNGH 310
Query: 306 MVPILGKITMDMTMFDITD-SLSIEVGDYIQIFGPDIKLDDVALASGTTNYDLLVRIGTR 364
+PI+G I+MD + D TD + GD++++ GP L+ V+ + T +++L +G R
Sbjct: 311 KLPIVGHISMDSIIVDATDLDKKPQRGDWVELIGPHQPLEKVSTDTNTIPHEILTSLGKR 370
Query: 365 YAKFY 369
Y + Y
Sbjct: 371 YKRIY 375