HHsearch alignment for GI: 254780334 and conserved domain: CHL00176

Probab=97.42  E-value=0.0013  Score=45.98  Aligned_cols=78  Identities=26%  Similarity=0.410  Sum_probs=51.6

Q ss_pred             HCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHH
Q ss_conf             65985787089995498751889999999998503981999986463047888875201577510000347889999999
Q gi|254780334|r   83 TGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATL  162 (479)
Q Consensus        83 LGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~  162 (479)
T Consensus       205 ~Gak~PkG--vLL~GpPGTGKTlLAkAvAgE---a~vpF~~~sgs~F~e~~v------G--------vga~rVR~LF~~-  264 (631)
T CHL00176        205 VGAKIPKG--VLLVGPPGTGKTLLAKAIAGE---AEVPFFSISGSEFVEMFV------G--------VGAARVRDLFKK-  264 (631)
T ss_pred             CCCCCCCE--EEEECCCCCCHHHHHHHHHCC---CCCCEEEEEHHHHHHHHC------C--------HHHHHHHHHHHH-
T ss_conf             49968965--898898998788999998565---588469988378556421------5--------558999999999-


Q ss_pred             HHCCCCCEEEECHHHHHH
Q ss_conf             731698289972168766
Q gi|254780334|r  163 ITNEKPDLVIIDSIQTLW  180 (479)
Q Consensus       163 i~~~~~~~vVIDSIQtl~  180 (479)
T Consensus       265 Ar~~aP~IiFIDEiDaig  282 (631)
T CHL00176        265 AKENSPCIVFIDEIDAVG  282 (631)
T ss_pred             HHHCCCEEEEEEEEEEEE
T ss_conf             986399699987101201