HHsearch alignment for GI: 254780334 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=96.73  E-value=0.011  Score=39.23  Aligned_cols=87  Identities=26%  Similarity=0.365  Sum_probs=49.1

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH-CCCC-----CC-CHHEECCCCHHHHHHHHH
Q ss_conf             0899954987518899999999985039819999864630478888752-0157-----75-100003478899999997
Q gi|254780334|r   91 SVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQR-LNTI-----NS-SVYIAIETNVEDIIATLI  163 (479)
Q Consensus        91 s~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~R-l~~~-----~~-~i~~~~e~~l~~il~~~i  163 (479)
T Consensus        14 ~~i~v~Gp~GSGKTaLie~~~~~L~~~-~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~a-i~~l~   91 (202)
T COG0378          14 LRIGVGGPPGSGKTALIEKTLRALKDE-YKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEA-IEELV   91 (202)
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHH-CCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH-HHHHH
T ss_conf             899961799867899999999999752-7768996404006559999737798068740387658867889999-99986


Q ss_pred             HCCC-CCEEEECHHHHH
Q ss_conf             3169-828997216876
Q gi|254780334|r  164 TNEK-PDLVIIDSIQTL  179 (479)
Q Consensus       164 ~~~~-~~~vVIDSIQtl  179 (479)
T Consensus        92 ~~~~~~Dll~iEs~GNL  108 (202)
T COG0378          92 LDFPDLDLLFIESVGNL  108 (202)
T ss_pred             HCCCCCCEEEEECCCCE
T ss_conf             31776778999237643