HHsearch alignment for GI: 254780334 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].

Probab=96.63  E-value=0.012  Score=38.84  Aligned_cols=76  Identities=24%  Similarity=0.339  Sum_probs=51.4

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCC
Q ss_conf             8708999549875188999999999850398--19999864630478888752015775100003478899999997316
Q gi|254780334|r   89 RGSVILVGGDPGIGKSTLLMQTAASLAYKKH--RITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNE  166 (479)
Q Consensus        89 ~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~--~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~  166 (479)
T Consensus       112 ~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~-a------------~~~~~~~~Fk~~---y-  174 (408)
T COG0593         112 AYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVK-A------------LRDNEMEKFKEK---Y-  174 (408)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH-H------------HHHHHHHHHHHH---H-
T ss_conf             6895799879999789999999999986299864885048998999999-9------------885048888876---4-


Q ss_pred             CCCEEEECHHHHHHH
Q ss_conf             982899721687665
Q gi|254780334|r  167 KPDLVIIDSIQTLWS  181 (479)
Q Consensus       167 ~~~~vVIDSIQtl~~  181 (479)
T Consensus       175 ~~dlllIDDiq~l~g  189 (408)
T COG0593         175 SLDLLLIDDIQFLAG  189 (408)
T ss_pred             CCCEEEECHHHHHCC
T ss_conf             267355513867567