HHsearch alignment for GI: 254780334 and conserved domain: COG1110

Probab=96.89  E-value=0.0054  Score=41.40  Aligned_cols=94  Identities=19%  Similarity=0.326  Sum_probs=58.3

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC-CHHHHHHHHHHCCCCCC--CHHEE-----CCCC----
Q ss_conf             578708999549875188999999999850398199998646-30478888752015775--10000-----3478----
Q gi|254780334|r   87 FVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE-AIGQIRLRAQRLNTINS--SVYIA-----IETN----  154 (479)
Q Consensus        87 l~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE-s~~Qi~~Ra~Rl~~~~~--~i~~~-----~e~~----  154 (479)
T Consensus        94 ~~rg~SFaiiAPTGvGKTTfg~~~sl~~a~kgkr~yii~PT~~Lv~Q~~~kl~~~~e~~~~~~~~~~yh~~l~~~ekee~  173 (1187)
T COG1110          94 LVRGKSFAIIAPTGVGKTTFGLLMSLYLAKKGKRVYIIVPTTTLVRQVYERLKKFAEDAGSLDVLVVYHSALPTKEKEEA  173 (1187)
T ss_pred             HHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf             87378448982788765479999999987558749999667899999999999988653785246653123665779999


Q ss_pred             HH------------------HHHHHHHHCCCCCEEEECHHHHHHH
Q ss_conf             89------------------9999997316982899721687665
Q gi|254780334|r  155 VE------------------DIIATLITNEKPDLVIIDSIQTLWS  181 (479)
Q Consensus       155 l~------------------~il~~~i~~~~~~~vVIDSIQtl~~  181 (479)
T Consensus       174 le~i~~gdfdIlitTs~FL~k~~e~-L~~~kFdfifVDDVDA~Lk  217 (1187)
T COG1110         174 LERIESGDFDILITTSQFLSKRFEE-LSKLKFDFIFVDDVDAILK  217 (1187)
T ss_pred             HHHHHCCCCCEEEEEHHHHHHHHHH-HCCCCCCEEEECCHHHHHH
T ss_conf             9998659963999747878866998-4045777899804788986