HHsearch alignment for GI: 254780334 and conserved domain: COG1123
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].
Probab=97.37 E-value=0.0085 Score=39.94 Aligned_cols=138 Identities=21% Similarity=0.282 Sum_probs=70.5
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC--CCHHHH-HHHH------------------------H
Q ss_conf 857870899954987518899999999985039819999864--630478-8887------------------------5
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE--EAIGQI-RLRA------------------------Q 138 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E--Es~~Qi-~~Ra------------------------~ 138 (479)
T Consensus 313 ~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~e 392 (539)
T COG1123 313 DLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAE 392 (539)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 76388789998899999899999994877888844999276556552314552420379996762336700069999874
Q ss_pred HCCCCCCCHHEECCCCHHHH---------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCH
Q ss_conf 20157751000034788999---------------------------999973169828997216876654204455636
Q gi|254780334|r 139 RLNTINSSVYIAIETNVEDI---------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTV 191 (479)
Q Consensus 139 Rl~~~~~~i~~~~e~~l~~i---------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~Gsv 191 (479)
T Consensus 393 pL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRvaIARA-La~~P~lli~DEp~S----aL-----Dv 462 (539)
T COG1123 393 PLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVAIARA-LALEPKLLILDEPVS----AL-----DV 462 (539)
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHH-HHCCCCEEEECCCCC----CC-----CH
T ss_conf 786506651678999999999871999789713860038525678999999-854998999648743----22-----78
Q ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 79999999999975307978999863036654331145787753027851
Q gi|254780334|r 192 IQVRTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 192 sQvre~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 463 svqa~VlnLl~~lq~e~g~t~lfISH--------Dl~vV~~i~drv~vm~ 504 (539)
T COG1123 463 SVQAQVLNLLKDLQEELGLTYLFISH--------DLAVVRYIADRVAVMY 504 (539)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEC--------CHHHHHHHCCEEEEEE
T ss_conf 99999999999999974988999958--------7899986386689997