HHsearch alignment for GI: 254780334 and conserved domain: COG1126
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].
Probab=97.25 E-value=0.0051 Score=41.55 Aligned_cols=136 Identities=23% Similarity=0.336 Sum_probs=71.6
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH--HHHHHHHHCCCCCCCHHEECC-CCHHHH----
Q ss_conf 8578708999549875188999999999850398199998646304--788887520157751000034-788999----
Q gi|254780334|r 86 GFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIG--QIRLRAQRLNTINSSVYIAIE-TNVEDI---- 158 (479)
Q Consensus 86 Gl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~--Qi~~Ra~Rl~~~~~~i~~~~e-~~l~~i---- 158 (479)
T Consensus 24 ~v~~Gevv~iiGpSGSGKSTlLRclN~-LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFPH~TvleNv~lap 102 (240)
T COG1126 24 SVEKGEVVVIIGPSGSGKSTLLRCLNG-LEEPDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAP 102 (240)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHC-CCCCCCCEEEECCEECCCHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHH
T ss_conf 673897899989999988899999977-8688786499998722545469999985576624665465532988877753
Q ss_pred --------------------------------------------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHH
Q ss_conf --------------------------------------------999973169828997216876654204455636799
Q gi|254780334|r 159 --------------------------------------------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQV 194 (479)
Q Consensus 159 --------------------------------------------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQv 194 (479)
T Consensus 103 ~~v~~~~k~eA~~~A~~lL~~VGL~dka~~yP~qLSGGQqQRVAIARA-LaM~P~vmLFDEPTSALDP---------Elv 172 (240)
T COG1126 103 VKVKKLSKAEAREKALELLEKVGLADKADAYPAQLSGGQQQRVAIARA-LAMDPKVMLFDEPTSALDP---------ELV 172 (240)
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHH-HCCCCCEEEECCCCCCCCH---------HHH
T ss_conf 997298999999999999998695566653951048078899999998-7179988863697543798---------899
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEEEE
Q ss_conf 99999999975307978999863036654331145787753027851
Q gi|254780334|r 195 RTSVQAMIQYAKKNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLYFE 241 (479)
Q Consensus 195 re~~~~L~~~AK~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~~e 241 (479)
T Consensus 173 ~EVL~vm~~LA~eG-mTMivVTH---EM~FA-----r~VadrviFmd 210 (240)
T COG1126 173 GEVLDVMKDLAEEG-MTMIIVTH---EMGFA-----REVADRVIFMD 210 (240)
T ss_pred HHHHHHHHHHHHCC-CEEEEEEC---HHHHH-----HHHHHEEEEEE
T ss_conf 99999999999769-86999950---36799-----98622289952