HHsearch alignment for GI: 254780334 and conserved domain: COG1129
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].
Probab=96.84 E-value=0.032 Score=35.80 Aligned_cols=142 Identities=21% Similarity=0.318 Sum_probs=76.1
Q ss_pred CCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC-----------
Q ss_conf 812488886598578708999549875188999999999850398199998646304788887520157-----------
Q gi|254780334|r 75 HIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTI----------- 143 (479)
Q Consensus 75 Gi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~----------- 143 (479)
T Consensus 20 gV~AL~~v-~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G-~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p~ 97 (500)
T COG1129 20 GVKALDGV-SLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSG-EILIDGKPVAFSSPRDALAAGIATVHQELSLVPN 97 (500)
T ss_pred CCEEECCE-EEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCC-EEEECCEECCCCCHHHHHHCCEEEEEECHHCCCC
T ss_conf 95033140-237837728999668888899999997286158861-7999998806899999986890899542121677
Q ss_pred ---CCCHHEEC------------------------------------CCCHHH--H--HHHHHHCCCCCEEEECHHHHHH
Q ss_conf ---75100003------------------------------------478899--9--9999731698289972168766
Q gi|254780334|r 144 ---NSSVYIAI------------------------------------ETNVED--I--IATLITNEKPDLVIIDSIQTLW 180 (479)
Q Consensus 144 ---~~~i~~~~------------------------------------e~~l~~--i--l~~~i~~~~~~~vVIDSIQtl~ 180 (479)
T Consensus 98 LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~~LsiaqrQ~VeIArAl-~~~arllIlDEPT--- 173 (500)
T COG1129 98 LSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVGDLSIAQRQMVEIARAL-SFDARVLILDEPT--- 173 (500)
T ss_pred CCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHH-HCCCCEEEECCCC---
T ss_conf 709998450466545777528999999999999973898870000330899999999999986-2699899973987---
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEE-------------ECCCCCCCCHHH
Q ss_conf 5420445563679999999999975307978999863-------------036654331145
Q gi|254780334|r 181 SQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGH-------------VTKEGQIAGPRV 229 (479)
Q Consensus 181 ~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~viligh-------------vTK~G~iAGp~~ 229 (479)
T Consensus 174 ------aaLt~~E~-~~Lf~~ir~Lk~~Gv~iI~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 174 ------AALTVKET-ERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred ------CCCCHHHH-HHHHHHHHHHHHCCCEEEEECCCHHHHHHHCCEEEEEECCEEEEECC
T ss_conf ------67998999-99999999999689889998676899998668899996997961015