HHsearch alignment for GI: 254780334 and conserved domain: COG1419

Probab=97.76  E-value=0.0013  Score=45.79  Aligned_cols=130  Identities=18%  Similarity=0.288  Sum_probs=81.2

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHH--CCCCCEEEEECC----CCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHH
Q ss_conf             7870899954987518899999999985--039819999864----6304788887520157751000034788999999
Q gi|254780334|r   88 VRGSVILVGGDPGIGKSTLLMQTAASLA--YKKHRITYVSGE----EAIGQIRLRAQRLNTINSSVYIAIETNVEDIIAT  161 (479)
Q Consensus        88 ~~Gs~~Li~G~PGvGKSTL~Lqia~~~a--~~g~~vlYvS~E----Es~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~  161 (479)
T Consensus       201 ~~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITtDtYRIGA~EQLk~Ya~im~vp~~v--v~~~~el~~ai~~  278 (407)
T COG1419         201 EQKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITTDTYRIGAVEQLKTYADIMGVPLEV--VYSPKELAEAIEA  278 (407)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEE--ECCHHHHHHHHHH
T ss_conf             46857999899887588799999999975325760689971441152899999999986995599--6399999999998


Q ss_pred             HHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCCCHHHHHHHHHEEEE
Q ss_conf             973169828997216876654204455636799999999999753-079789998630366543311457877530278
Q gi|254780334|r  162 LITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAK-KNGVAMVLVGHVTKEGQIAGPRVIEHMVDAVLY  239 (479)
Q Consensus       162 ~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK-~~~i~vilighvTK~G~iAGp~~LeH~VD~vl~  239 (479)
T Consensus       279 l---~~~d~ILVDTaG--------rs~~----D~~~i~el~~~~~~~~~i~~~Lvlsat~K-----~~dlkei~~~f~~  337 (407)
T COG1419         279 L---RDCDVILVDTAG--------RSQY----DKEKIEELKELIDVSHSIEVYLVLSATTK-----YEDLKEIIKQFSL  337 (407)
T ss_pred             H---HCCCEEEEECCC--------CCCC----CHHHHHHHHHHHHCCCCCEEEEEEECCCC-----HHHHHHHHHHHCC
T ss_conf             5---318889996899--------8833----78999999999703566217999845764-----6889999997245