HHsearch alignment for GI: 254780334 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].

Probab=96.96  E-value=0.015  Score=38.14  Aligned_cols=123  Identities=16%  Similarity=0.260  Sum_probs=68.0

Q ss_pred             HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC--CCCEEEEECCC--CHHHHHHH-HHHCCCCCCCHHEECCC
Q ss_conf             888865985787089995498751889999999998503--98199998646--30478888-75201577510000347
Q gi|254780334|r   79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYK--KHRITYVSGEE--AIGQIRLR-AQRLNTINSSVYIAIET  153 (479)
Q Consensus        79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~--g~~vlYvS~EE--s~~Qi~~R-a~Rl~~~~~~i~~~~e~  153 (479)
T Consensus        33 l~~~~~~~~p~n--~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t~~~i~~~i~~~~~~~--p~~g~~~~  108 (366)
T COG1474          33 LAPALRGERPSN--IIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRTPYQVLSKILNKLGKV--PLTGDSSL  108 (366)
T ss_pred             HHHHHCCCCCCC--EEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHCCC--CCCCCCHH
T ss_conf             999855899860--79988999873289999999997331567579995130787879999999982689--97676326


Q ss_pred             C-HHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             8-89999999731698289972168766542044556367999999999997530797899986
Q gi|254780334|r  154 N-VEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVG  216 (479)
Q Consensus       154 ~-l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilig  216 (479)
T Consensus       109 ~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~-----------~~LY~L~r~~~~~~~~v~vi~  161 (366)
T COG1474         109 EILKRLYDNLSKKGKTVIVILDEVDALVDKDG-----------EVLYSLLRAPGENKVKVSIIA  161 (366)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCHHHHHCCCC-----------CHHHHEECCCCCCCEEEEEEE
T ss_conf             89999999777418759999764765415464-----------145511124776753799999