HHsearch alignment for GI: 254780334 and conserved domain: COG2909

>COG2909 MalT ATP-dependent transcriptional regulator [Transcription].
Probab=97.31  E-value=0.0017  Score=45.13  Aligned_cols=119  Identities=21%  Similarity=0.289  Sum_probs=74.4

Q ss_pred             HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC--------CCCCCCHH-E
Q ss_conf             88886598578708999549875188999999999850398199998646304788887520--------15775100-0
Q gi|254780334|r   79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL--------NTINSSVY-I  149 (479)
Q Consensus        79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl--------~~~~~~i~-~  149 (479)
T Consensus        28 ~~~L~~~--~~~RL~li~APAGfGKttl~aq~~~-~~~~~~~v~Wlslde~dndp~rF~~yLi~al~~~~p~~~~~a~~l  104 (894)
T COG2909          28 LDRLRRA--NDYRLILISAPAGFGKTTLLAQWRE-LAADGAAVAWLSLDESDNDPARFLSYLIAALQQATPTLGDEAQTL  104 (894)
T ss_pred             HHHHHHC--CCCEEEEEECCCCCCHHHHHHHHHH-HCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             9998607--7843899867887758899999998-647655435764577667889999999999987472324789999


Q ss_pred             EC-------CCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             03-------47889999999731698289972168766542044556367999999999997530797
Q gi|254780334|r  150 AI-------ETNVEDIIATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGV  210 (479)
Q Consensus       150 ~~-------e~~l~~il~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i  210 (479)
T Consensus       105 ~q~~~~~~l~~l~~~L~~Ela~~~~pl~LVlDDyHli~~~~----------l~~~l~fLl~~~P~~l~  162 (894)
T COG2909         105 LQKHQYVSLESLLSSLLNELASYEGPLYLVLDDYHLISDPA----------LHEALRFLLKHAPENLT  162 (894)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC----------HHHHHHHHHHHCCCCEE
T ss_conf             87335565999999999998751496499953532257602----------89999999971998749