HHsearch alignment for GI: 254780334 and conserved domain: COG4088

Probab=97.39  E-value=0.0014  Score=45.76  Aligned_cols=126  Identities=21%  Similarity=0.241  Sum_probs=69.5

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCCCE
Q ss_conf             08999549875188999999999850398199998646304788887520157751000034788999999973169828
Q gi|254780334|r   91 SVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKPDL  170 (479)
Q Consensus        91 s~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~~  170 (479)
T Consensus         2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~kdy~--~~i~~DEslpi~ke~---yres~~ks~~rlldSalkn~~   76 (261)
T COG4088           2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEKDYL--RGILWDESLPILKEV---YRESFLKSVERLLDSALKNYL   76 (261)
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH--HHEECCCCCCHHHHH---HHHHHHHHHHHHHHHHHCCEE
T ss_conf             569982699988017899999999972001121320145--412331324037999---999998889999999863649


Q ss_pred             EEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC----------CCCCCHHHHHHHHHE
Q ss_conf             997216876654204455636799999999999753079789998630366----------543311457877530
Q gi|254780334|r  171 VIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKE----------GQIAGPRVIEHMVDA  236 (479)
Q Consensus       171 vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~----------G~iAGp~~LeH~VD~  236 (479)
T Consensus        77 VIvDdtN-----Yyks-------mR---rqL~ceak~~~tt~ciIyl~~plDtc~rrN~ergepip~Evl~qly~R  137 (261)
T COG4088          77 VIVDDTN-----YYKS-------MR---RQLACEAKERKTTWCIIYLRTPLDTCLRRNRERGEPIPEEVLRQLYDR  137 (261)
T ss_pred             EEEECCC-----HHHH-------HH---HHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf             9970632-----8889-------99---999999986378659999726889998860247999989999999996