HHsearch alignment for GI: 254780334 and conserved domain: COG4930
>COG4930 Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones].
Probab=96.80 E-value=0.0052 Score=41.48 Aligned_cols=137 Identities=26% Similarity=0.362 Sum_probs=92.1
Q ss_pred CCCEEEEEEE--CCCCCC-EEEEEEEECCCCCCCCEEEEECCCHHHH---HHHHHH------HHH-HCCCCCCCCHHHEE
Q ss_conf 6734899730--489741-1553310115778772477604686665---555898------875-11110246222100
Q gi|254780334|r 295 SPGTAVFAGI--EGTRAL-LVEIQSLVVPTSLGMPRRTVVGWDSSRL---AMILAV------LEA-RCNIKFGNHDVHLN 361 (479)
Q Consensus 295 ~~Gs~v~~~~--eG~r~~-lvEvQALv~~~~~~~p~R~~~G~d~~rl---~~llAv------l~k-~~~~~~~~~Di~~n 361 (479)
T Consensus 502 kpg~~~~v~~~~~g~~glyrfe~q~~ag~-----gk~~~sg~gs~t~~keair~~f~yfk~n~~~vs~t~~~~e~~y~lh 576 (683)
T COG4930 502 KPGVVHLVTQAESGMTGLYRFETQMTAGN-----GKHSVSGLGSSTSAKEAIRVGFDYFKGNLSRVSATAKFSEHEYHLH 576 (683)
T ss_pred CCCEEEEEEECCCCCEEEEEEEEEEEECC-----CCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCEEEECCCEEEEE
T ss_conf 98638887410357413588888985058-----7333466787720788999888885031554000152032102677
Q ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHC
Q ss_conf 1456111543--258799999999724886887859998742473163407889999999976998999775765322
Q gi|254780334|r 362 IAGGYRISEP--AADVAVAAALISSILSIPLPSDFVYFGEVSLSGSVRAVGHMQQRLKEAEKIGFLSGVFPESAKGEC 437 (479)
Q Consensus 362 v~gG~~i~~p--a~DLaia~ailSs~~~~~~~~~~~~~GEl~L~GeIR~V~~i~~ri~eA~~~G~~~~iiP~~n~~e~ 437 (479)
T Consensus 577 v~~l~~-~g~s~~~sl~a~ialcs~~l~k~~qeq~~vlgsmtlgg~i~~~~~la~~lq~~~dsgakkv~lp~ssa~~i 653 (683)
T COG4930 577 VVELHN-TGPSTATSLAALIALCSVLLAKPVQEQMVVLGSMTLGGVINPVQDLAASLQLAFDSGAKKVLLPMSSAVDI 653 (683)
T ss_pred EEEECC-CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 653006-78404666999999989986020776563310013054041688889999998845875588763345776