HHsearch alignment for GI: 254780334 and conserved domain: KOG0739

Probab=96.65  E-value=0.029  Score=36.11  Aligned_cols=86  Identities=24%  Similarity=0.354  Sum_probs=55.9

Q ss_pred             HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHH
Q ss_conf             88886598578708999549875188999999999850398199998646304788887520157751000034788999
Q gi|254780334|r   79 LDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDI  158 (479)
Q Consensus        79 LDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~i  158 (479)
T Consensus       155 FPqlFtGkR~PwrgiLLyGPPGTGKSYLAKAVATEA---n--STFFSvSS--SDLv--SKWmGE--------SEkLVknL  217 (439)
T KOG0739         155 FPQLFTGKRKPWRGILLYGPPGTGKSYLAKAVATEA---N--STFFSVSS--SDLV--SKWMGE--------SEKLVKNL  217 (439)
T ss_pred             CHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHC---C--CCEEEEEH--HHHH--HHHHCC--------HHHHHHHH
T ss_conf             535415887754257886799975779999987414---7--70687301--7889--987321--------79999999


Q ss_pred             HHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf             999973169828997216876654
Q gi|254780334|r  159 IATLITNEKPDLVIIDSIQTLWSQ  182 (479)
Q Consensus       159 l~~~i~~~~~~~vVIDSIQtl~~~  182 (479)
T Consensus       218 Fem-ARe~kPSIIFiDEiDslcg~  240 (439)
T KOG0739         218 FEM-ARENKPSIIFIDEIDSLCGS  240 (439)
T ss_pred             HHH-HHHCCCCEEEEEHHHHHCCC
T ss_conf             999-87349947986344443268