HHsearch alignment for GI: 254780334 and conserved domain: KOG0744

Probab=97.19  E-value=0.0025  Score=43.83  Aligned_cols=123  Identities=18%  Similarity=0.242  Sum_probs=58.7

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEE--CCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCC
Q ss_conf             8708999549875188999999999850398199998--64630478888752015775100003478899999997316
Q gi|254780334|r   89 RGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVS--GEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNE  166 (479)
Q Consensus        89 ~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS--~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~  166 (479)
T Consensus       176 ~NRliLlhGPPGTGKTSLCKaLaQkLSIR~~~~y~~~~liEinshsLFSKW--FsESgKlV~-----kmF~kI~ELv~d~  248 (423)
T KOG0744         176 WNRLILLHGPPGTGKTSLCKALAQKLSIRTNDRYYKGQLIEINSHSLFSKW--FSESGKLVA-----KMFQKIQELVEDR  248 (423)
T ss_pred             EEEEEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHHHHHHH--HHHHHHHHH-----HHHHHHHHHHHCC
T ss_conf             414899857999882279999987514652376444069997046788988--712113899-----9999999997178


Q ss_pred             -CCCEEEECHHHHHHHHHHCCCCCCH--HHHHH---HHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             -9828997216876654204455636--79999---9999999753079789998630
Q gi|254780334|r  167 -KPDLVIIDSIQTLWSQTAESSPGTV--IQVRT---SVQAMIQYAKKNGVAMVLVGHV  218 (479)
Q Consensus       167 -~~~~vVIDSIQtl~~~~~~s~~Gsv--sQvre---~~~~L~~~AK~~~i~vilighv  218 (479)
T Consensus       249 ~~lVfvLIDEVESLa~aR~s~~S~~EpsDaIRvVNalLTQlDrlK~~~NvliL~TSNl  306 (423)
T KOG0744         249 GNLVFVLIDEVESLAAARTSASSRNEPSDAIRVVNALLTQLDRLKRYPNVLILATSNL  306 (423)
T ss_pred             CCEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
T ss_conf             9689998078788899987541379982189999999998998604797799962626