HHsearch alignment for GI: 254780334 and conserved domain: KOG0780

Probab=97.42  E-value=0.005  Score=41.65  Aligned_cols=148  Identities=24%  Similarity=0.258  Sum_probs=94.8

Q ss_pred             CCCHHHHHHHCCCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC----CCHHHHHHHHHHCCC
Q ss_conf             781248888659857-------870899954987518899999999985039819999864----630478888752015
Q gi|254780334|r   74 THIDELDRVTGGGFV-------RGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGE----EAIGQIRLRAQRLNT  142 (479)
Q Consensus        74 TGi~eLDrvLGGGl~-------~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~E----Es~~Qi~~Ra~Rl~~  142 (479)
T Consensus        78 ~vf~eL~kl~dp~~~~~~~~K~kpsVimfVGLqG~GKTTtc~KlA~y~kkkG~K~~LvcaDTFRagAfDQLkqnA~k~~i  157 (483)
T KOG0780          78 AVFDELVKLLDPGKSALQPKKGKPSVIMFVGLQGSGKTTTCTKLAYYYKKKGYKVALVCADTFRAGAFDQLKQNATKARV  157 (483)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf             99999999718997646615689708999830578863008999999984687245776022453068999987674077


Q ss_pred             CCCCHHEECCCCHHHHHHHH---HHCCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEEEEE
Q ss_conf             77510000347889999999---73169828997216876654204455636799999999999753079-789998630
Q gi|254780334|r  143 INSSVYIAIETNVEDIIATL---ITNEKPDLVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNG-VAMVLVGHV  218 (479)
Q Consensus       143 ~~~~i~~~~e~~l~~il~~~---i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~-i~vilighv  218 (479)
T Consensus       158 P~yg--syte~dpv~ia~egv~~fKke~fdvIIvDTS------------GRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDa  223 (483)
T KOG0780         158 PFYG--SYTEADPVKIASEGVDRFKKENFDVIIVDTS------------GRHKQEASLFEEMKQVSKAIKPDEIIFVMDA  223 (483)
T ss_pred             EEEE--CCCCCCHHHHHHHHHHHHHHCCCCEEEEECC------------CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf             0684--0366555899999999888639728998278------------7301248999999999851598738999856


Q ss_pred             CCCCCC--CCHHHHHHHHHE
Q ss_conf             366543--311457877530
Q gi|254780334|r  219 TKEGQI--AGPRVIEHMVDA  236 (479)
Q Consensus       219 TK~G~i--AGp~~LeH~VD~  236 (479)
T Consensus       224 -siGQaae~Qa~aFk~~vdv  242 (483)
T KOG0780         224 -SIGQAAEAQARAFKETVDV  242 (483)
T ss_pred             -CCCHHHHHHHHHHHHHHCC
T ss_conf             -2007679999988776154