HHsearch alignment for GI: 254780334 and conserved domain: KOG1433

Probab=99.35  E-value=1.4e-11  Score=104.03  Aligned_cols=207  Identities=24%  Similarity=0.367  Sum_probs=135.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC--CHHHHHHHHHHCCC
Q ss_conf             4556663237812488886598578708999549875188999999999850398199998646--30478888752015
Q gi|254780334|r   65 SIEEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEE--AIGQIRLRAQRLNT  142 (479)
Q Consensus        65 ~~~~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EE--s~~Qi~~Ra~Rl~~  142 (479)
T Consensus        86 ~~~~~~~l~Tg~~~lD~lL~gGi~~g~~TEi~G~p~~GKtQlc~~~~v~~~gge~~~l~IDs~s~~~~~~~~~ia~~~~~  165 (326)
T KOG1433          86 LRSELGFLSTGSKALDKLLGGGIETGSLTELVGPPGSGKTQLCHTLAVTCGGGEGKVLYIDTESTFRLERLTEIAGRSGL  165 (326)
T ss_pred             HHCCCEEECCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHCCCCHHHHHHHHHHH
T ss_conf             61676254155055667742675558356885589844778888998870687511899952111033211356666303


Q ss_pred             CCC----CHHEECCCCHHHH------HHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCHHH----HHHHHHHHHHHHHHC
Q ss_conf             775----1000034788999------99997316982899721687665420445563679----999999999975307
Q gi|254780334|r  143 INS----SVYIAIETNVEDI------IATLITNEKPDLVIIDSIQTLWSQTAESSPGTVIQ----VRTSVQAMIQYAKKN  208 (479)
Q Consensus       143 ~~~----~i~~~~e~~l~~i------l~~~i~~~~~~~vVIDSIQtl~~~~~~s~~GsvsQ----vre~~~~L~~~AK~~  208 (479)
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~l~~vds~ta~~~~~~~g-~~~~~a~~~~~~~~~~~l~~la~~~  244 (326)
T KOG1433         166 RGRDTLSNLMLARAYNLDHQLQLIQEAEIMINQSRVKLLIVDSATALYRTTFKG-RGELSARQMLLAKFLRSLKKLADEF  244 (326)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             067788888999998566677779999998620311699941345411331066-5215788999999999998888861


Q ss_pred             CCEEEEEEEECCC--C--CC-------CCHHHHHHHHHEEEEEECCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCC
Q ss_conf             9789998630366--5--43-------31145787753027851555666544215676320256765127998515663
Q gi|254780334|r  209 GVAMVLVGHVTKE--G--QI-------AGPRVIEHMVDAVLYFEGGTRNTQYDYRILRSVKNRFGPTDEIGVFEMSDKGL  277 (479)
Q Consensus       209 ~i~vilighvTK~--G--~i-------AGp~~LeH~VD~vl~~ege~~~~~~~~R~Lr~~KNRfG~t~e~gvf~m~~~Gl  277 (479)
T Consensus       245 g~~vvitn~v~~~~d~~~~f~~~~~~~~~~~~~~H~~~tr~~~~~----~~g~~~~~k~~~s~~l~e~~~-~~~i~~~g~  319 (326)
T KOG1433         245 GVAVVITNQVTAQVDGAIMFGSDPKKPIGGNIWAHAVTTRLGLRK----GKGERRICKIADSPCLPEAEA-VFAITEDGI  319 (326)
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----CCCCCCHHHHHCCCCCCCCHH-HHHHHHHHH
T ss_conf             861798622023456653347665353554067889999999984----365100135542788995055-688876513