HHsearch alignment for GI: 254780334 and conserved domain: KOG1564
>KOG1564 consensus.
Probab=99.59 E-value=1.4e-14 Score=125.97 Aligned_cols=152 Identities=22% Similarity=0.340 Sum_probs=116.9
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC------CCCCEEEEECCCCHHH-----HHHHHH
Q ss_conf 63237812488886598578708999549875188999999999850------3981999986463047-----888875
Q gi|254780334|r 70 SRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAY------KKHRITYVSGEEAIGQ-----IRLRAQ 138 (479)
Q Consensus 70 ~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~------~g~~vlYvS~EEs~~Q-----i~~Ra~ 138 (479)
T Consensus 82 ~~lttgc~~LD~~L~GGi~~~giTEi~GeSg~GKtQL~lQL~L~VQLp~~~GGL~~~~vYI~TE~~fP~rRL~qL~~~~~ 161 (351)
T KOG1564 82 SKLTTGCVALDECLRGGIPTDGITEICGESGCGKTQLLLQLSLCVQLPRSHGGLGGGAVYICTESPFPTRRLHQLSHTLP 161 (351)
T ss_pred HHCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 01104558888874499334548888602577588999999988608551089777439997688874778999998550
Q ss_pred -H-----CCC----CCCCHHEECCCCHHHHHHH-------HHHCCCCCEEEECHHHHHHHHHHCCCCC----CHHHHHHH
Q ss_conf -2-----015----7751000034788999999-------9731698289972168766542044556----36799999
Q gi|254780334|r 139 -R-----LNT----INSSVYIAIETNVEDIIAT-------LITNEKPDLVIIDSIQTLWSQTAESSPG----TVIQVRTS 197 (479)
Q Consensus 139 -R-----l~~----~~~~i~~~~e~~l~~il~~-------~i~~~~~~~vVIDSIQtl~~~~~~s~~G----svsQvre~ 197 (479)
T Consensus 162 ~rp~~~~~~~~~~Npgd~IFv~~~~d~d~l~~iv~~qlPiL~~r~~i~LVIiDSVAa~fR~E~d~~~Sdl~~r~~~l~rl 241 (351)
T KOG1564 162 QRPNPEKELNYNDNPGDHIFVENVHDVDHLLHIVNRQLPILLNRKKIKLVIIDSVAALFRSEFDYNPSDLKKRARHLFRL 241 (351)
T ss_pred CCCCCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEECCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 47994344342169776479873353356899886642310115730089971205777877325722325678899999
Q ss_pred HHHHHHHHHHCCCEEEEEEEECCC
Q ss_conf 999999753079789998630366
Q gi|254780334|r 198 VQAMIQYAKKNGVAMVLVGHVTKE 221 (479)
Q Consensus 198 ~~~L~~~AK~~~i~vilighvTK~ 221 (479)
T Consensus 242 a~~Lr~LA~~~~~aVV~~NQVtd~ 265 (351)
T KOG1564 242 AGKLRQLASKFDLAVVCANQVTDR 265 (351)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 999999887528628984111445