HHsearch alignment for GI: 254780334 and conserved domain: PRK06321

>PRK06321 replicative DNA helicase; Provisional.
Probab=99.90  E-value=3e-22  Score=181.88  Aligned_cols=201  Identities=18%  Similarity=0.297  Sum_probs=145.4

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CCEEEEECCCCHHHHHHHHH--HCCCCC-
Q ss_conf             66323781248888659857870899954987518899999999985039-81999986463047888875--201577-
Q gi|254780334|r   69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKK-HRITYVSGEEAIGQIRLRAQ--RLNTIN-  144 (479)
Q Consensus        69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g-~~vlYvS~EEs~~Qi~~Ra~--Rl~~~~-  144 (479)
T Consensus       206 itGipTGf~~LD~lt~-Gl~~GdliviaaRPsmGKTalalnia~~~a~~~~~~v~~fSLEMs~~ql~~R~ls~~s~i~~~  284 (472)
T PRK06321        206 ISGIPTHFIDLDKMIN-GFSPSNLMILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQLIHRIICSRSEVESK  284 (472)
T ss_pred             CCCCCCCHHHHHHHHC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC
T ss_conf             6422568488999855-988675799853899977999999999999856994699757799999999998740376755


Q ss_pred             ------------------------CCHHEECC--CCHHHHH---HHHHHCCCCCEEEECHHHHHHHHHHC-CCCCCHHHH
Q ss_conf             ------------------------51000034--7889999---99973169828997216876654204-455636799
Q gi|254780334|r  145 ------------------------SSVYIAIE--TNVEDII---ATLITNEKPDLVIIDSIQTLWSQTAE-SSPGTVIQV  194 (479)
Q Consensus       145 ------------------------~~i~~~~e--~~l~~il---~~~i~~~~~~~vVIDSIQtl~~~~~~-s~~GsvsQv  194 (479)
T Consensus       285 ~i~~g~l~~~e~~~~~~a~~~l~~~~l~idd~~~~ti~~i~~~~r~~k~~~~l~~vvIDYlqL~~~~~~~~~~~~r~~~i  364 (472)
T PRK06321        285 KISVGDLSGRDFQRIVSVVNEMQEHTLLIDDQPGLKITDLRARARRMKESYDIQFLIIDYLQLLSGSGTLRNSESRQTEI  364 (472)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCHHHHH
T ss_conf             21047999999999999999985487578679999899999999999873899879997277416777777788899999


Q ss_pred             HHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC---CCCCCCCEEEEEEEEC
Q ss_conf             9999999997530797899986303665-----------4331145787753027851555---6665442156763202
Q gi|254780334|r  195 RTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT---RNTQYDYRILRSVKNR  260 (479)
Q Consensus       195 re~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~---~~~~~~~R~Lr~~KNR  260 (479)
T Consensus       365 ~~isr~lK~lAkel~vpvi~LsQLnR~~e~r~~krP~lsDLreSG~IEqdAD~V~~l~R~~~~~~~~~~~~~e~ivaK~R  444 (472)
T PRK06321        365 SEISRMLKNLARELNIPILCLSQLSRKVEDRANHRPMMSDLRESGSIEQDSDLVMFLLRREYYDPNDKPGTAELIVAKNR  444 (472)
T ss_pred             HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCHHHCCCCCCCCCEEEEEECCC
T ss_conf             99999999999997997999722684312279999762301264410430868999744532498788982699997267


Q ss_pred             CCCCCCEEEE
Q ss_conf             5676512799
Q gi|254780334|r  261 FGPTDEIGVF  270 (479)
Q Consensus       261 fG~t~e~gvf  270 (479)
T Consensus       445 ~G~~g~v~~~  454 (472)
T PRK06321        445 HGSIGSVPLV  454 (472)
T ss_pred             CCCCCEEEEE
T ss_conf             8987259999