HHsearch alignment for GI: 254780334 and conserved domain: PRK06749
>PRK06749 replicative DNA helicase; Provisional.
Probab=99.91 E-value=2.3e-22 Score=182.71 Aligned_cols=202 Identities=19% Similarity=0.277 Sum_probs=146.8
Q ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH--------
Q ss_conf 566632378124888865985787089995498751889999999998503981999986463047888875--------
Q gi|254780334|r 67 EEESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQ-------- 138 (479)
Q Consensus 67 ~~~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~-------- 138 (479)
T Consensus 164 ~~~~Gi~TGf~~LD~lt-~Gl~~g~LiviaaRPsmGKTa~alnia~~~a~~g~~v~~fSlEMs~~~l~~R~ls~~s~v~~ 242 (428)
T PRK06749 164 KEITGIETGYTSLNKMT-CGLQEGDFVVLGARPSMGKTAFALNVGLHAAKSGAAVGLFSLEMSSKQLLKRMASCVGEVSG 242 (428)
T ss_pred CCCCCCCCCHHHHHHHH-CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCH
T ss_conf 99876877838898752-49998868999627989768999999999996499279983789999999999997549988
Q ss_pred -HCC-----CC---------------CCCHHEECC--CCHHHHHH---HHHHCCCCC--EEEECHHHHHHHHHHCCCCCC
Q ss_conf -201-----57---------------751000034--78899999---997316982--899721687665420445563
Q gi|254780334|r 139 -RLN-----TI---------------NSSVYIAIE--TNVEDIIA---TLITNEKPD--LVIIDSIQTLWSQTAESSPGT 190 (479)
Q Consensus 139 -Rl~-----~~---------------~~~i~~~~e--~~l~~il~---~~i~~~~~~--~vVIDSIQtl~~~~~~s~~Gs 190 (479)
T Consensus 243 ~~i~~~~~~~~~~~~~~~~~a~~~l~~~~l~i~d~~~~ti~~i~~~~r~~~~~~g~~~~livIDYlqLi~~~~-~~~~~r 321 (428)
T PRK06749 243 GRLKNPKHRFAMEDWEKVSKAFAEIGELPLEIYDNAGVTVQDIWMQTRKLKRKHGDKKVLIIVDYLQLITGDP-KHKGNR 321 (428)
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCC-CCCCCH
T ss_conf 8862776779999999999999998559659975899767999999999999749987699976776505787-777789
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC-----------CCCCHHHHHHHHHEEEEEECCC-CC---CCCCCEEEE
Q ss_conf 67999999999997530797899986303665-----------4331145787753027851555-66---654421567
Q gi|254780334|r 191 VIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEG-----------QIAGPRVIEHMVDAVLYFEGGT-RN---TQYDYRILR 255 (479)
Q Consensus 191 vsQvre~~~~L~~~AK~~~i~vilighvTK~G-----------~iAGp~~LeH~VD~vl~~ege~-~~---~~~~~R~Lr 255 (479)
T Consensus 322 ~~ev~~isr~lK~lAkel~vpvi~lsQLnR~~e~r~dkrP~lsDLreSG~IEqdAD~v~~l~R~~~y~~~~~~~~~~eii 401 (428)
T PRK06749 322 FQEISEISRKLKLLARELNVCVVALSQLSRSVESRQDKRPLLSDLRETGQIEQDADVIMLMYREDYYDKETMQKEMTEIH 401 (428)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCHHHHHCCEEEEECCHHHCCCCCCCCCCEEEE
T ss_conf 99999999999999999699899971378552337899976012103330244277899972431048776788825999
Q ss_pred EEEECCCCCCCEEEE
Q ss_conf 632025676512799
Q gi|254780334|r 256 SVKNRFGPTDEIGVF 270 (479)
Q Consensus 256 ~~KNRfG~t~e~gvf 270 (479)
T Consensus 402 vaKnR~G~~G~v~~~ 416 (428)
T PRK06749 402 VAKHRNGPVGSFKLR 416 (428)
T ss_pred EECCCCCCCCEEEEE
T ss_conf 972589997069999