HHsearch alignment for GI: 254780334 and conserved domain: PRK06793

>PRK06793 fliI flagellum-specific ATP synthase; Validated.
Probab=97.35  E-value=0.018  Score=37.50  Aligned_cols=108  Identities=20%  Similarity=0.254  Sum_probs=65.0

Q ss_pred             CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC--CCCC
Q ss_conf             66323781248888659857870899954987518899999999985039819999864630478888752015--7751
Q gi|254780334|r   69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNT--INSS  146 (479)
Q Consensus        69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~--~~~~  146 (479)
T Consensus       137 ~e~l~TGIraID~l~--pigrGQR~gIfg~sGvGKstLl~~i~~~~-~adv~Vi~lIGeRgrEv~efi~~~l~~~gl~~t  213 (432)
T PRK06793        137 TDVFETGIKSIDSML--TIGIGQKIGIFAGSGVGKSTLLGMIAKNA-KADINVISLVGERGREVKDFIRKELGEEGMRKS  213 (432)
T ss_pred             CCCCCCCCCHHHHCC--CCCCCCEEEEECCCCCCHHHHHHHHHHHC-CCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCE
T ss_conf             874004873100015--61246266663268987899999998724-578657999888627999999998644675212


Q ss_pred             HHEECCCC---HH---------HHHHHHHHCCCCCEEEECHHHHH
Q ss_conf             00003478---89---------99999973169828997216876
Q gi|254780334|r  147 VYIAIETN---VE---------DIIATLITNEKPDLVIIDSIQTL  179 (479)
Q Consensus       147 i~~~~e~~---l~---------~il~~~i~~~~~~~vVIDSIQtl  179 (479)
T Consensus       214 vvV~atsd~p~~~r~~a~~~a~aiAEyfrd~G~~VLli~DslTr~  258 (432)
T PRK06793        214 VVVVATSDESHLMQLRAAKLATSIAEYFRDQGNNVLLMMDSVTRF  258 (432)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHH
T ss_conf             788725889989999887551237889986699689994567888