HHsearch alignment for GI: 254780334 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=98.06 E-value=5.6e-05 Score=55.87 Aligned_cols=131 Identities=21% Similarity=0.292 Sum_probs=77.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHCCCCC
Q ss_conf 70899954987518899999999985039819999864630478888752015775100003478899999997316982
Q gi|254780334|r 90 GSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRLNTINSSVYIAIETNVEDIIATLITNEKPD 169 (479)
Q Consensus 90 Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl~~~~~~i~~~~e~~l~~il~~~i~~~~~~ 169 (479)
T Consensus 183 ~~nLlf~G~~G~GKTfLa~~IA~ell~~g~sViy~ta~~L~~~l~~--~~~~---------~~~~~~~~~~~l---~~~D 248 (330)
T PRK06835 183 NENLLFYGNTGTGKTFLSNCIAKELLDRGKTVIYRTSDELIENLRE--IRFN---------NDNDAPELEDLL---INCD 248 (330)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHH--HHCC---------CCCCHHHHHHHH---HHCC
T ss_conf 8866988999998899999999999987994999629999999999--7545---------764489999999---6189
Q ss_pred EEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC--CCCCHHHHHHHHH--EEEEEECC
Q ss_conf 89972168766542044556367999999999997530797899986303665--4331145787753--02785155
Q gi|254780334|r 170 LVIIDSIQTLWSQTAESSPGTVIQVRTSVQAMIQYAKKNGVAMVLVGHVTKEG--QIAGPRVIEHMVD--AVLYFEGG 243 (479)
Q Consensus 170 ~vVIDSIQtl~~~~~~s~~GsvsQvre~~~~L~~~AK~~~i~vilighvTK~G--~iAGp~~LeH~VD--~vl~~ege 243 (479)
T Consensus 249 LLIIDDLG~E~~t~~-----~~~~L----f~iIN~R~~~~k~tIITTNl~~~eL~~~y~eRi~SRi~~~~~~~~~~G~ 317 (330)
T PRK06835 249 LLIIDDLGTESITEF-----SKTEL----FNLINKRLLMNKKMIISTNLSLEELLKTYSERIASRLLGNFTLLKFYGE 317 (330)
T ss_pred EEEEECCCCCCCCHH-----HHHHH----HHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEEECC
T ss_conf 899721034558868-----99999----9999999867999799889998999998748999999818549985265