HHsearch alignment for GI: 254780334 and conserved domain: PRK07594
>PRK07594 type III secretion system ATPase; Validated.
Probab=97.46 E-value=0.01 Score=39.44 Aligned_cols=107 Identities=22% Similarity=0.229 Sum_probs=63.0
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHC---CCCCC
Q ss_conf 663237812488886598578708999549875188999999999850398199998646304788887520---15775
Q gi|254780334|r 69 ESRIQTHIDELDRVTGGGFVRGSVILVGGDPGIGKSTLLMQTAASLAYKKHRITYVSGEEAIGQIRLRAQRL---NTINS 145 (479)
Q Consensus 69 ~~Ri~TGi~eLDrvLGGGl~~Gs~~Li~G~PGvGKSTL~Lqia~~~a~~g~~vlYvS~EEs~~Qi~~Ra~Rl---~~~~~ 145 (479)
T Consensus 136 ~epl~TGIkaID~l~--pigrGQR~gIfgg~GvGKTtLl~~i~~~-~~ad-v~V~~lIGERgrEv~efie~~~~~~~~~r 211 (433)
T PRK07594 136 TQPLMTGIRAIDSVA--TCGEGQRVGIFSAPGVGKSTLLAMLCNA-PDAD-SNVLVLIGERGREVREFIDFTLSEETRKR 211 (433)
T ss_pred CCCCCCCCEEHHCCC--CCCCCCEEEECCCCCCCHHHHHHHHHHC-CCCC-CEEEEEECCCHHHHHHHHHHHHHCCCCCE
T ss_conf 861436740001357--7124787420478999855899999842-4798-15999941004889999998653366203
Q ss_pred CHHEECCCC---HH---------HHHHHHHHCCCCCEEEECHHHHH
Q ss_conf 100003478---89---------99999973169828997216876
Q gi|254780334|r 146 SVYIAIETN---VE---------DIIATLITNEKPDLVIIDSIQTL 179 (479)
Q Consensus 146 ~i~~~~e~~---l~---------~il~~~i~~~~~~~vVIDSIQtl 179 (479)
T Consensus 212 svvV~atsd~p~~~R~~a~~~a~aiAEyFrd~G~~VLl~~DslTR~ 257 (433)
T PRK07594 212 CVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRY 257 (433)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH
T ss_conf 8999955889999999998776678999986696489973438889